Hub : Traits

Bone: trabecular spacing

Tags: Physiology · Bone

Project: r01_doug_adams

0 loci · 0 genes with independent associations · 0 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.17
Adipose	alternative TSS	0	0	1.28
Adipose	gene expression	0	0	1.31
Adipose	isoform ratio	0	0	1.22
Adipose	intron excision ratio	0	0	1.31
Adipose	mRNA stability	0	0	1.32
BLA	alternative polyA	0	0	1.15
BLA	alternative TSS	0	0	1.42
BLA	gene expression	0	0	1.31
BLA	isoform ratio	0	0	1.27
BLA	intron excision ratio	0	0	1.38
BLA	mRNA stability	0	0	1.3
Brain	alternative polyA	0	0	1.27
Brain	alternative TSS	0	0	1.34
Brain	gene expression	0	0	1.27
Brain	isoform ratio	0	0	1.28
Brain	intron excision ratio	0	0	1.34
Brain	mRNA stability	0	0	1.26
Eye	alternative polyA	0	0	1.17
Eye	alternative TSS	0	0	1.16
Eye	gene expression	0	0	1.34
Eye	isoform ratio	0	0	1.2
Eye	intron excision ratio	0	0	1.36
Eye	mRNA stability	0	0	1.36
IL	alternative polyA	0	0	1.24
IL	alternative TSS	0	0	1.51
IL	gene expression	0	0	1.31
IL	isoform ratio	0	0	1.22
IL	intron excision ratio	0	0	1.32
IL	mRNA stability	0	0	1.23
LHb	alternative polyA	0	0	1.47
LHb	alternative TSS	0	0	1.49
LHb	gene expression	0	0	1.29
LHb	isoform ratio	0	0	1.19
LHb	intron excision ratio	0	0	1.35
LHb	mRNA stability	0	0	1.38
Liver	alternative polyA	0	0	1.21
Liver	alternative TSS	0	0	1.25
Liver	gene expression	0	0	1.28
Liver	isoform ratio	0	0	1.26
Liver	intron excision ratio	0	0	1.23
Liver	mRNA stability	0	0	1.33
NAcc	alternative polyA	0	0	1.23
NAcc	alternative TSS	0	0	1.22
NAcc	gene expression	0	0	1.28
NAcc	isoform ratio	0	0	1.31
NAcc	intron excision ratio	0	0	1.4
NAcc	mRNA stability	0	0	1.31
OFC	alternative polyA	0	0	1.39
OFC	alternative TSS	0	0	1.28
OFC	gene expression	0	0	1.29
OFC	isoform ratio	0	0	1.29
OFC	intron excision ratio	0	0	1.44
OFC	mRNA stability	0	0	1.27
PL	alternative polyA	0	0	1.24
PL	alternative TSS	0	0	1.34
PL	gene expression	0	0	1.3
PL	isoform ratio	0	0	1.25
PL	intron excision ratio	0	0	1.37
PL	mRNA stability	0	0	1.3