Liver weight, left

Tags: Physiology · Liver · Weight

Project: dissection

1 locus · 1 gene with independent associations · 1 total associated gene

Significant Loci

# Chr Start pos End pos # assoc genes # joint models Best TWAS P Best GWAS P Cond GWAS P Joint genes
1 chr1 76658582 78051660 1 1 1.74e-08 2.87e-06 1.13e-75 LOC120099769

Pleiotropic Associations

Trait Chi2 ratio # genes+ # genes++ % genes++ Corr Corr P Genes
BMI with tail 1.97 1 0 0 0 1e+00 LOC120099769
BMI without tail 2.07 1 0 0 0 1e+00 LOC120099769
Body weight 1.43 1 0 0 0 1e+00 LOC120099769
Left kidney weight 4.71 1 0 0 0 1e+00 LOC120099769
Right kidney weight 3.2 1 0 0 0 1e+00 LOC120099769
Liver weight, right 9.65 1 0 0 0 1e+00 LOC120099769
Food consumed during 24 hour testing period 3.75 1 0 0 0 1e+00 LOC120099769
Patch foraging indifference point AUC 4.01 1 0 0 0 1e+00 LOC120099769
Indifference point function ln k 3.01 1 0 0 0 1e+00 LOC120099769
Indifference point function log k 3.01 1 0 0 0 1e+00 LOC120099769
Patch foraging time to switch 0 sec 3.75 1 0 0 0 1e+00 LOC120099769
Patch foraging water rate 0 sec 2.62 1 0 0 0 1e+00 LOC120099769
Locomotor testing rearing 4.72 1 0 0 0 1e+00 LOC120099769
Reaction time num false alarms 5.24 1 0 0 0 1e+00 LOC120099769
Reaction time num false alarms AUC 5.09 1 0 0 0 1e+00 LOC120099769
Locomotion velocity, session 7 3.87 1 0 0 0 1e+00 LOC120099769
Bone: elastic displacement 3.41 1 0 0 0 1e+00 LOC120099769
Breakpoint value in progressive ratio session 7.06 1 0 0 0 1e+00 LOC120099769
Sum of active levers in priming session hrs 5-6 4.74 1 0 0 0 1e+00 LOC120099769
Ambulatory time after self-admin 7.78 1 0 0 0 1e+00 LOC120099769
Total resting periods, locomotor time 1 4.06 1 0 0 0 1e+00 LOC120099769
Bouts of movement, locomotor time 2 7.61 1 0 0 0 1e+00 LOC120099769
Total resting periods, locomotor time 2 8.47 1 0 0 0 1e+00 LOC120099769
Food seeking constrained by brief footshock 3.27 1 0 0 0 1e+00 LOC120099769
Se content in liver 5.3 1 0 0 0 1e+00 LOC120099769

Associations by panel

Tissue RNA modality # hits % hits/tests Avg chisq
Adipose alternative polyA 0 0 1.67
Adipose alternative TSS 0 0 1.54
Adipose gene expression 0 0 1.61
Adipose isoform ratio 0 0 1.56
Adipose intron excision ratio 0 0 1.51
Adipose mRNA stability 0 0 1.56
BLA alternative polyA 0 0 1.55
BLA alternative TSS 0 0 1.67
BLA gene expression 0 0 1.62
BLA isoform ratio 0 0 1.68
BLA intron excision ratio 0 0 1.57
BLA mRNA stability 0 0 1.66
Brain alternative polyA 0 0 1.57
Brain alternative TSS 0 0 1.64
Brain gene expression 1 0 1.58
Brain isoform ratio 0 0 1.62
Brain intron excision ratio 0 0 1.57
Brain mRNA stability 0 0 1.57
Eye alternative polyA 0 0 1.7
Eye alternative TSS 0 0 1.78
Eye gene expression 0 0 1.69
Eye isoform ratio 0 0 1.76
Eye intron excision ratio 0 0 1.55
Eye mRNA stability 0 0 1.57
IL alternative polyA 0 0 1.55
IL alternative TSS 0 0 1.83
IL gene expression 0 0 1.6
IL isoform ratio 0 0 1.77
IL intron excision ratio 0 0 1.59
IL mRNA stability 0 0 1.65
LHb alternative polyA 0 0 1.61
LHb alternative TSS 0 0 1.61
LHb gene expression 0 0 1.67
LHb isoform ratio 0 0 1.64
LHb intron excision ratio 0 0 1.54
LHb mRNA stability 0 0 1.67
Liver alternative polyA 0 0 1.63
Liver alternative TSS 0 0 1.61
Liver gene expression 0 0 1.6
Liver isoform ratio 0 0 1.56
Liver intron excision ratio 0 0 1.49
Liver mRNA stability 0 0 1.64
NAcc alternative polyA 0 0 1.55
NAcc alternative TSS 0 0 1.64
NAcc gene expression 0 0 1.62
NAcc isoform ratio 0 0 1.61
NAcc intron excision ratio 0 0 1.6
NAcc mRNA stability 0 0 1.59
OFC alternative polyA 0 0 1.64
OFC alternative TSS 0 0 1.83
OFC gene expression 0 0 1.68
OFC isoform ratio 0 0 1.73
OFC intron excision ratio 0 0 1.49
OFC mRNA stability 0 0 1.7
PL alternative polyA 0 0 1.59
PL alternative TSS 0 0 1.68
PL gene expression 0 0 1.61
PL isoform ratio 0 0 1.63
PL intron excision ratio 0 0 1.55
PL mRNA stability 0 0 1.61
pVTA alternative polyA 0 0 1.53
pVTA alternative TSS 0 0 1.64
pVTA gene expression 0 0 1.6
pVTA isoform ratio 0 0 1.6
pVTA intron excision ratio 0 0 1.53
pVTA mRNA stability 0 0 1.54
RMTg alternative polyA 0 0 1.55
RMTg alternative TSS 0 0 1.67
RMTg gene expression 0 0 1.62
RMTg isoform ratio 0 0 1.44
RMTg intron excision ratio 0 0 1.54
RMTg mRNA stability 0 0 1.42