Hub : Traits

Bone: post-yield work

Tags: Physiology · Bone

Project: r01_doug_adams

0 loci · 0 genes with independent associations · 0 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.39
Adipose	alternative TSS	0	0	1.33
Adipose	gene expression	0	0	1.36
Adipose	isoform ratio	0	0	1.35
Adipose	intron excision ratio	0	0	1.28
Adipose	mRNA stability	0	0	1.36
BLA	alternative polyA	0	0	1.39
BLA	alternative TSS	0	0	1.37
BLA	gene expression	0	0	1.42
BLA	isoform ratio	0	0	1.42
BLA	intron excision ratio	0	0	1.31
BLA	mRNA stability	0	0	1.4
Brain	alternative polyA	0	0	1.38
Brain	alternative TSS	0	0	1.36
Brain	gene expression	0	0	1.36
Brain	isoform ratio	0	0	1.39
Brain	intron excision ratio	0	0	1.32
Brain	mRNA stability	0	0	1.34
Eye	alternative polyA	0	0	1.58
Eye	alternative TSS	0	0	1.16
Eye	gene expression	0	0	1.36
Eye	isoform ratio	0	0	1.31
Eye	intron excision ratio	0	0	1.07
Eye	mRNA stability	0	0	1.34
IL	alternative polyA	0	0	1.38
IL	alternative TSS	0	0	1.23
IL	gene expression	0	0	1.37
IL	isoform ratio	0	0	1.39
IL	intron excision ratio	0	0	1.27
IL	mRNA stability	0	0	1.4
LHb	alternative polyA	0	0	1.44
LHb	alternative TSS	0	0	1.24
LHb	gene expression	0	0	1.4
LHb	isoform ratio	0	0	1.38
LHb	intron excision ratio	0	0	1.22
LHb	mRNA stability	0	0	1.48
Liver	alternative polyA	0	0	1.37
Liver	alternative TSS	0	0	1.29
Liver	gene expression	0	0	1.33
Liver	isoform ratio	0	0	1.39
Liver	intron excision ratio	0	0	1.26
Liver	mRNA stability	0	0	1.34
NAcc	alternative polyA	0	0	1.38
NAcc	alternative TSS	0	0	1.42
NAcc	gene expression	0	0	1.41
NAcc	isoform ratio	0	0	1.34
NAcc	intron excision ratio	0	0	1.27
NAcc	mRNA stability	0	0	1.43
OFC	alternative polyA	0	0	1.46
OFC	alternative TSS	0	0	1.35
OFC	gene expression	0	0	1.38
OFC	isoform ratio	0	0	1.43
OFC	intron excision ratio	0	0	1.21
OFC	mRNA stability	0	0	1.42
PL	alternative polyA	0	0	1.45
PL	alternative TSS	0	0	1.4
PL	gene expression	0	0	1.41
PL	isoform ratio	0	0	1.42
PL	intron excision ratio	0	0	1.31
PL	mRNA stability	0	0	1.4
pVTA	alternative polyA	0	0	1.48
pVTA	alternative TSS	0	0	1.46
pVTA	gene expression	0	0	1.4
pVTA	isoform ratio	0	0	1.36
pVTA	intron excision ratio	0	0	1.31
pVTA	mRNA stability	0	0	1.46
RMTg	alternative polyA	0	0	1.41
RMTg	alternative TSS	0	0	1.42
RMTg	gene expression	0	0	1.41
RMTg	isoform ratio	0	0	1.46
RMTg	intron excision ratio	0	0	1
RMTg	mRNA stability	0	0	1.67