Hub : Traits

Bone: cortical thickness

Tags: Physiology · Bone

Project: r01_doug_adams

0 loci · 0 genes with independent associations · 0 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.18
Adipose	alternative TSS	0	0	1.15
Adipose	gene expression	0	0	1.16
Adipose	isoform ratio	0	0	1.15
Adipose	intron excision ratio	0	0	1.15
Adipose	mRNA stability	0	0	1.21
BLA	alternative polyA	0	0	1.21
BLA	alternative TSS	0	0	1.04
BLA	gene expression	0	0	1.2
BLA	isoform ratio	0	0	1.14
BLA	intron excision ratio	0	0	1.22
BLA	mRNA stability	0	0	1.17
Brain	alternative polyA	0	0	1.17
Brain	alternative TSS	0	0	1.17
Brain	gene expression	0	0	1.16
Brain	isoform ratio	0	0	1.18
Brain	intron excision ratio	0	0	1.22
Brain	mRNA stability	0	0	1.17
Eye	alternative polyA	0	0	1.56
Eye	alternative TSS	0	0	1.18
Eye	gene expression	0	0	1.32
Eye	isoform ratio	0	0	1.12
Eye	intron excision ratio	0	0	1.12
Eye	mRNA stability	0	0	1.12
IL	alternative polyA	0	0	1.16
IL	alternative TSS	0	0	1.04
IL	gene expression	0	0	1.16
IL	isoform ratio	0	0	1.23
IL	intron excision ratio	0	0	1.21
IL	mRNA stability	0	0	1.14
LHb	alternative polyA	0	0	1.07
LHb	alternative TSS	0	0	1.21
LHb	gene expression	0	0	1.17
LHb	isoform ratio	0	0	1.2
LHb	intron excision ratio	0	0	1.11
LHb	mRNA stability	0	0	1.19
Liver	alternative polyA	0	0	1.03
Liver	alternative TSS	0	0	1.23
Liver	gene expression	0	0	1.16
Liver	isoform ratio	0	0	1.11
Liver	intron excision ratio	0	0	1.11
Liver	mRNA stability	0	0	1.19
NAcc	alternative polyA	0	0	1.14
NAcc	alternative TSS	0	0	1.22
NAcc	gene expression	0	0	1.2
NAcc	isoform ratio	0	0	1.14
NAcc	intron excision ratio	0	0	1.16
NAcc	mRNA stability	0	0	1.17
OFC	alternative polyA	0	0	1.22
OFC	alternative TSS	0	0	1.31
OFC	gene expression	0	0	1.18
OFC	isoform ratio	0	0	1.3
OFC	intron excision ratio	0	0	1.33
OFC	mRNA stability	0	0	1.21
PL	alternative polyA	0	0	1.21
PL	alternative TSS	0	0	1.16
PL	gene expression	0	0	1.19
PL	isoform ratio	0	0	1.19
PL	intron excision ratio	0	0	1.21
PL	mRNA stability	0	0	1.16