Hub : Traits

Cu content in liver

Tags: Physiology · Liver

Project: vulpe_liver_2014

0 loci · 0 genes with independent associations · 0 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.21
Adipose	alternative TSS	0	0	1.23
Adipose	gene expression	0	0	1.2
Adipose	isoform ratio	0	0	1.23
Adipose	intron excision ratio	0	0	1.37
Adipose	mRNA stability	0	0	1.22
BLA	alternative polyA	0	0	1.24
BLA	alternative TSS	0	0	1.18
BLA	gene expression	0	0	1.2
BLA	isoform ratio	0	0	1.27
BLA	intron excision ratio	0	0	1.26
BLA	mRNA stability	0	0	1.11
Brain	alternative polyA	0	0	1.18
Brain	alternative TSS	0	0	1.31
Brain	gene expression	0	0	1.16
Brain	isoform ratio	0	0	1.27
Brain	intron excision ratio	0	0	1.32
Brain	mRNA stability	0	0	1.15
Eye	alternative polyA	0	0	1.96
Eye	alternative TSS	0	0	1.1
Eye	gene expression	0	0	1.22
Eye	isoform ratio	0	0	1.19
Eye	intron excision ratio	0	0	1.36
Eye	mRNA stability	0	0	1.27
IL	alternative polyA	0	0	1.38
IL	alternative TSS	0	0	1.26
IL	gene expression	0	0	1.19
IL	isoform ratio	0	0	1.29
IL	intron excision ratio	0	0	1.2
IL	mRNA stability	0	0	1.07
LHb	alternative polyA	0	0	1.07
LHb	alternative TSS	0	0	1.17
LHb	gene expression	0	0	1.19
LHb	isoform ratio	0	0	1.28
LHb	intron excision ratio	0	0	1.24
LHb	mRNA stability	0	0	1.16
Liver	alternative polyA	0	0	1.2
Liver	alternative TSS	0	0	1.12
Liver	gene expression	0	0	1.2
Liver	isoform ratio	0	0	1.21
Liver	intron excision ratio	0	0	1.12
Liver	mRNA stability	0	0	1.16
NAcc	alternative polyA	0	0	1.2
NAcc	alternative TSS	0	0	1.29
NAcc	gene expression	0	0	1.19
NAcc	isoform ratio	0	0	1.22
NAcc	intron excision ratio	0	0	1.29
NAcc	mRNA stability	0	0	1.12
OFC	alternative polyA	0	0	1.23
OFC	alternative TSS	0	0	1.34
OFC	gene expression	0	0	1.19
OFC	isoform ratio	0	0	1.31
OFC	intron excision ratio	0	0	1.33
OFC	mRNA stability	0	0	1.13
PL	alternative polyA	0	0	1.16
PL	alternative TSS	0	0	1.29
PL	gene expression	0	0	1.16
PL	isoform ratio	0	0	1.2
PL	intron excision ratio	0	0	1.26
PL	mRNA stability	0	0	1.15