Hub : Traits

Bone: cortical apparent density

Tags: Physiology · Bone

Project: r01_doug_adams

0 loci · 0 genes with independent associations · 0 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.28
Adipose	alternative TSS	0	0	1.29
Adipose	gene expression	0	0	1.27
Adipose	isoform ratio	0	0	1.3
Adipose	intron excision ratio	0	0	1.37
Adipose	mRNA stability	0	0	1.26
BLA	alternative polyA	0	0	1.31
BLA	alternative TSS	0	0	1.28
BLA	gene expression	0	0	1.28
BLA	isoform ratio	0	0	1.29
BLA	intron excision ratio	0	0	1.41
BLA	mRNA stability	0	0	1.36
Brain	alternative polyA	0	0	1.27
Brain	alternative TSS	0	0	1.38
Brain	gene expression	0	0	1.28
Brain	isoform ratio	0	0	1.35
Brain	intron excision ratio	0	0	1.43
Brain	mRNA stability	0	0	1.3
Eye	alternative polyA	0	0	1.23
Eye	alternative TSS	0	0	1.56
Eye	gene expression	0	0	1.36
Eye	isoform ratio	0	0	1.35
Eye	intron excision ratio	0	0	1.35
Eye	mRNA stability	0	0	1.54
IL	alternative polyA	0	0	1.21
IL	alternative TSS	0	0	1.22
IL	gene expression	0	0	1.28
IL	isoform ratio	0	0	1.34
IL	intron excision ratio	0	0	1.41
IL	mRNA stability	0	0	1.32
LHb	alternative polyA	0	0	1.32
LHb	alternative TSS	0	0	1.41
LHb	gene expression	0	0	1.25
LHb	isoform ratio	0	0	1.43
LHb	intron excision ratio	0	0	1.36
LHb	mRNA stability	0	0	1.34
Liver	alternative polyA	0	0	1.31
Liver	alternative TSS	0	0	1.38
Liver	gene expression	0	0	1.28
Liver	isoform ratio	0	0	1.27
Liver	intron excision ratio	0	0	1.41
Liver	mRNA stability	0	0	1.31
NAcc	alternative polyA	0	0	1.3
NAcc	alternative TSS	0	0	1.32
NAcc	gene expression	0	0	1.28
NAcc	isoform ratio	0	0	1.31
NAcc	intron excision ratio	0	0	1.4
NAcc	mRNA stability	0	0	1.33
OFC	alternative polyA	0	0	1.23
OFC	alternative TSS	0	0	1.49
OFC	gene expression	0	0	1.3
OFC	isoform ratio	0	0	1.22
OFC	intron excision ratio	0	0	1.49
OFC	mRNA stability	0	0	1.27
PL	alternative polyA	0	0	1.35
PL	alternative TSS	0	0	1.38
PL	gene expression	0	0	1.29
PL	isoform ratio	0	0	1.3
PL	intron excision ratio	0	0	1.43
PL	mRNA stability	0	0	1.35
pVTA	alternative polyA	0	0	1.41
pVTA	alternative TSS	0	0	1.34
pVTA	gene expression	0	0	1.29
pVTA	isoform ratio	0	0	1.3
pVTA	intron excision ratio	0	0	1.43
pVTA	mRNA stability	0	0	1.37
RMTg	alternative polyA	0	0	1.43
RMTg	alternative TSS	0	0	1.13
RMTg	gene expression	0	0	1.27
RMTg	isoform ratio	0	0	1.35
RMTg	intron excision ratio	0	0	1.35
RMTg	mRNA stability	0	0	1.33