Hub : Traits

Patch foraging total patch changes 18 sec

Delay discounting using a sequential patch depletion procedure, total patch (feeder) changes in the last two sessions with an experimenter-imposed delay of 18 sec [n]

Tags: Behavior · Delay discounting

Project: p50_david_dietz

3 loci · 3 genes with independent associations · 10 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes
1	chr5	152566208	154149713	7	1	9.12e-08	7.86e-08	2.64e-02	Fbxo42
2	chr9	75969545	77365260	1	1	3.50e-15	1.26e-02	1.00e+00	Zfand2b
3	chr15	21176176	22573267	2	1	7.37e-08	6.87e-07	6.47e-01	LOC102554609

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes
BMI with tail	8.42	1	1	33.3	0	1.00e+00	Zfand2b
BMI without tail	53.65	1	1	33.3	0	1.00e+00	Zfand2b
Epididymis fat weight	111.28	1	1	33.3	0	1.00e+00	Zfand2b
Heart weight	20.94	4	1	33.3	0.03	9.57e-01	Fbxo42 Necap2 Sdhb Zfand2b
Left kidney weight	27.22	1	1	33.3	0	1.00e+00	Zfand2b
Right kidney weight	54.05	1	1	33.3	0	1.00e+00	Zfand2b
Tail length	64.2	2	1	33.3	0	1.00e+00	Fbxo42 Zfand2b
Length with tail	4.78	1	0	0	0	1.00e+00	Zfand2b
Length without tail	40.74	2	1	33.3	0	1.00e+00	Fbxo42 Zfand2b
Liver weight, right	17.57	1	1	33.3	0	1.00e+00	Zfand2b
Parametrial fat weight	9.99	1	0	0	0	1.00e+00	Zfand2b
Retroperitoneal fat weight	7.53	1	0	0	0	1.00e+00	Zfand2b
Intraocular pressure	51.69	1	1	33.3	0	1.00e+00	Zfand2b
Number of licking bursts	32.5	1	1	33.3	0	1.00e+00	Zfand2b
Food consumed during 24 hour testing period	15.78	1	0	0	0	1.00e+00	Zfand2b
Times rat made contact with spout	9.25	1	0	0	0	1.00e+00	Zfand2b
Mean time between licks in bursts	9.22	1	0	0	0	1.00e+00	Zfand2b
Mean num. licks in bursts	18.13	1	0	0	0	1.00e+00	Zfand2b
Std. dev. time between licks in bursts	9.9	2	0	0	0	1.00e+00	Fbxo42 Zfand2b
Water consumed over 24 hours	34.33	1	1	33.3	0	1.00e+00	Zfand2b
Patch foraging indifference point 0 sec	7.17	5	0	0	0.99	7.65e-09	Crocc LOC102554609 Necap2 Sdhb Zfand2b
Patch foraging indifference point AUC	18.44	2	1	33.3	0	1.00e+00	Fbxo42 Zfand2b
Indifference point function ln k	30.79	2	1	33.3	0	1.00e+00	Fbxo42 Zfand2b
Indifference point function log k	30.79	2	1	33.3	0	1.00e+00	Fbxo42 Zfand2b
Patch foraging total patch changes 0 sec	9.58	5	1	33.3	0.99	1.97e-05	Crocc LOC102554609 Necap2 Sdhb Zfand2b
Patch foraging total patch changes 12 sec	10.09	5	0	0	1	5.30e-13	Crocc Fbxo42 LOC102554609 Necap2 Sdhb
Patch foraging total patch changes 24 sec	16.25	6	1	33.3	0.96	2.38e-06	Crocc Fbxo42 LOC102554609 Necap2 Sdhb Zfand2b
Patch foraging total patch changes 6 sec	10.7	6	1	33.3	1	1.58e-12	Crocc Fbxo42 LOC102554609 Necap2 Sdhb Zfand2b
Patch foraging time to switch 0 sec	33.47	1	1	33.3	0	1.00e+00	Zfand2b
Patch foraging water rate 0 sec	39.47	1	1	33.3	0	1.00e+00	Zfand2b
Patch foraging water rate 12 sec	69.49	1	1	33.3	0	1.00e+00	Zfand2b
Patch foraging water rate 18 sec	9.71	1	0	0	0	1.00e+00	Zfand2b
Patch foraging water rate 24 sec	12.61	1	0	0	0	1.00e+00	Zfand2b
Patch foraging water rate 6 sec	35.43	1	1	33.3	0	1.00e+00	Zfand2b
Locomotor activity	8.95	2	0	0	0	1.00e+00	Fbxo42 Zfand2b
Locomotor testing distance	26.23	2	1	33.3	0	1.00e+00	Fbxo42 Zfand2b
Locomotor testing rearing	53.76	2	1	33.3	0	1.00e+00	Fbxo42 Zfand2b
Light reinforcement 1	19.25	1	1	33.3	0	1.00e+00	Zfand2b
Light reinforcement 2	6.57	1	0	0	0	1.00e+00	Zfand2b
Reaction time number correct	114.79	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time mean minus median	179.03	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time mean minus median AUC	232.47	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time num false alarms AUC	27.43	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time trials correct on left	114.79	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time trials on left	106.69	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time mean	36.11	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time mean AUC	33.75	1	1	33.3	0	1.00e+00	Zfand2b
Median of all reaction times	17.65	1	0	0	0	1.00e+00	Zfand2b
Reaction time omissions	46.56	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time premature initiations	41.6	1	1	33.3	0	1.00e+00	Zfand2b
Std. dev. reaction times	72.92	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time trials completed	106.69	1	1	33.3	0	1.00e+00	Zfand2b
Reaction time trials AUC	108.76	1	1	33.3	0	1.00e+00	Zfand2b
Cocaine response after cond. corrected	8.95	5	0	0	-0.65	5.57e-02	Crocc Fbxo42 Necap2 Sdhb Zfand2b
Cocaine response after cond. not corrected	10.73	1	0	0	0	1.00e+00	Zfand2b
Cocaine response before conditioning	6.75	1	0	0	0	1.00e+00	Fbxo42
Saline control response	12.57	2	0	0	0	1.00e+00	LOC102554609 Zfand2b
Conditioned reinforcement - actives	152.54	1	1	33.3	0	1.00e+00	Zfand2b
Conditioned reinforcement - inactives	135.63	1	1	33.3	0	1.00e+00	Zfand2b
Conditioned locomotion	13.93	1	0	0	0	1.00e+00	Zfand2b
Intermittent access intake day 1-15 change	156.77	1	1	33.3	0	1.00e+00	Zfand2b
Intermittent access intake escalation	117.41	1	1	33.3	0	1.00e+00	Zfand2b
Intermitt. access day 1 inactive lever presses	169.63	1	1	33.3	0	1.00e+00	Zfand2b
Intermitt. access day 15 inactive lever presses	294.26	1	1	33.3	0	1.00e+00	Zfand2b
Intermittent access day 1 total infusions	71.42	1	1	33.3	0	1.00e+00	Zfand2b
Intermittent access day 15 total infusions	35.39	1	1	33.3	0	1.00e+00	Zfand2b
Intermittent access terminal intake (last 3 days)	25.82	1	1	33.3	0	1.00e+00	Zfand2b
Intermittent access day 1 locomotion	26.47	1	1	33.3	0	1.00e+00	Zfand2b
Intermittent access day 15 total locomotion	93.08	1	1	33.3	0	1.00e+00	Zfand2b
Intermittent access total locomotion	12.43	1	0	0	0	1.00e+00	Zfand2b
Intermittent access standard deviation	442.51	1	1	33.3	0	1.00e+00	Zfand2b
Cocaine induced anxiety	125.35	1	1	33.3	0	1.00e+00	Zfand2b
Baseline Anxiety	393.92	1	1	33.3	0	1.00e+00	Zfand2b
Incentive Sensitization - Responses	309.83	1	1	33.3	0	1.00e+00	Zfand2b
Incentive Sensitization - Breakpoint	300.45	1	1	33.3	0	1.00e+00	Zfand2b
Progressive ratio test 1 active lever presses	26.41	1	1	33.3	0	1.00e+00	Zfand2b
Progressive ratio test 1 breakpoint	19.19	1	0	0	0	1.00e+00	Zfand2b
Progressive ratio test 2 active lever presses	109.22	1	1	33.3	0	1.00e+00	Zfand2b
Progressive ratio test 2 breakpoint	106.65	1	1	33.3	0	1.00e+00	Zfand2b
Progressive ratio test 2 inactive lever presses	63.47	1	1	33.3	0	1.00e+00	Zfand2b
Short access day 1 total inactive lever presses	21.93	1	0	0	0	1.00e+00	Zfand2b
Short access day 10 total inactive lever presses	43.04	1	1	33.3	0	1.00e+00	Zfand2b
Short access day 10 total infusions	9.63	1	0	0	0	1.00e+00	Fbxo42
Short access day 1 locomotion	129.19	1	1	33.3	0	1.00e+00	Zfand2b
Short access day 10 total locomotion	432.47	1	1	33.3	0	1.00e+00	Zfand2b
Short access total locomotion	209.96	1	1	33.3	0	1.00e+00	Zfand2b
Compulsive drug intake	68.39	1	1	33.3	0	1.00e+00	Zfand2b
One hour access (0.3 mA shock)	22.58	1	0	0	0	1.00e+00	Zfand2b
Number of responses in last shaping day	67.75	1	1	33.3	0	1.00e+00	Zfand2b
Bone: cortical thickness	5.69	3	0	0	1	5.07e-08	Crocc Necap2 Sdhb
Bone: cortical thickness	7.14	1	0	0	0	1.00e+00	LOC102554609
Bone: elastic work	6.74	2	0	0	1	7.74e-08	Crocc Necap2
Distance traveled after self-admin	8.9	1	0	0	0	1.00e+00	Zfand2b
Delta time in open arm before/after self-admin	26.67	1	0	0	0	1.00e+00	Zfand2b
Active lever presses in extinction session 6	26.41	1	0	0	0	1.00e+00	Zfand2b
Time in closed arm before self-admin	44.32	1	1	33.3	0	1.00e+00	Zfand2b
Time in open arm before self-admin	24.67	1	0	0	0	1.00e+00	Zfand2b
Time to tail flick, vehicle, after self-admin	75.62	1	1	33.3	0	1.00e+00	Zfand2b
Time to tail flick, test, before self-admin	10.68	1	0	0	0	1.00e+00	Zfand2b
Delta time to tail flick, vehicle, before/after SA	74.6	1	1	33.3	0	1.00e+00	Zfand2b
Ambulatory time before self-admin	25.36	1	0	0	0	1.00e+00	Zfand2b
Area under the delay curve	31.15	1	1	33.3	0	1.00e+00	Zfand2b
Delay disc. indifference point, 16s delay	69.03	1	1	33.3	0	1.00e+00	Zfand2b
Delay disc. indifference point, 24s delay	27.43	1	0	0	0	1.00e+00	Zfand2b
Delay disc. indifference point, 8s delay	74.24	1	1	33.3	0	1.00e+00	Zfand2b
Delay discount exponential model param	16.14	1	0	0	0	1.00e+00	Zfand2b
Delay discount hyperbolic model param	15.89	1	0	0	0	1.00e+00	Zfand2b
Fecal boli incidents, locomotor time 1	176.47	1	1	33.3	0	1.00e+00	Zfand2b
Time >=10cm from walls, locomotor time 1	79.04	1	1	33.3	0	1.00e+00	Zfand2b
Rest time, locomotor task time 1	11.47	1	0	0	0	1.00e+00	Zfand2b
Vertical activity count, locomotor time 1	97.7	1	1	33.3	0	1.00e+00	Zfand2b
Bouts of movement, locomotor time 2	23.9	1	0	0	0	1.00e+00	Zfand2b
Total resting periods, locomotor time 2	36.28	1	1	33.3	0	1.00e+00	Zfand2b
Rest time, locomotor task time 2	44.91	1	1	33.3	0	1.00e+00	Zfand2b
Distance moved, locomotor task time 2	83.87	1	1	33.3	0	1.00e+00	Zfand2b
Vertical activity count, locomotor time 2	13.16	1	0	0	0	1.00e+00	Zfand2b
Weight adjusted by age	9.91	1	0	0	0	1.00e+00	Zfand2b
Seeking ratio, delayed vs. immediate footshock	8.74	1	0	0	0	1.00e+00	Zfand2b
Locomotion in novel chamber post-restriction	14.04	1	0	0	0	1.00e+00	Zfand2b
Food seeking constrained by brief footshock	14.98	1	0	0	0	1.00e+00	Zfand2b
Run reversals in cocaine runway, females	36.45	1	1	33.3	0	1.00e+00	Zfand2b
Latency to leave start box in cocaine runway	34.23	1	1	33.3	0	1.00e+00	Zfand2b
Latency to leave start box in cocaine runway, F	31.9	1	1	33.3	0	1.00e+00	Zfand2b

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.26
Adipose	alternative TSS	0	0	1.33
Adipose	gene expression	0	0	1.28
Adipose	isoform ratio	0	0	1.31
Adipose	intron excision ratio	0	0	1.66
Adipose	mRNA stability	0	0	1.29
BLA	alternative polyA	0	0	1.16
BLA	alternative TSS	0	0	1.24
BLA	gene expression	0	0	1.29
BLA	isoform ratio	0	0	1.25
BLA	intron excision ratio	0	0	1.36
BLA	mRNA stability	2	0.1	1.31
Brain	alternative polyA	2	0.1	1.21
Brain	alternative TSS	0	0	1.28
Brain	gene expression	0	0	1.29
Brain	isoform ratio	0	0	1.28
Brain	intron excision ratio	0	0	1.36
Brain	mRNA stability	0	0	1.27
Eye	alternative polyA	0	0	1.25
Eye	alternative TSS	0	0	0.93
Eye	gene expression	0	0	1.33
Eye	isoform ratio	0	0	1.23
Eye	intron excision ratio	0	0	1.5
Eye	mRNA stability	0	0	1.47
IL	alternative polyA	0	0	1.14
IL	alternative TSS	0	0	1.22
IL	gene expression	0	0	1.26
IL	isoform ratio	0	0	1.32
IL	intron excision ratio	0	0	1.25
IL	mRNA stability	0	0	1.3
LHb	alternative polyA	0	0	1.12
LHb	alternative TSS	0	0	1.24
LHb	gene expression	0	0	1.27
LHb	isoform ratio	0	0	1.23
LHb	intron excision ratio	0	0	1.19
LHb	mRNA stability	0	0	1.24
Liver	alternative polyA	0	0	1.23
Liver	alternative TSS	0	0	1.29
Liver	gene expression	0	0	1.28
Liver	isoform ratio	0	0	1.26
Liver	intron excision ratio	0	0	1.34
Liver	mRNA stability	0	0	1.28
NAcc	alternative polyA	0	0	1.19
NAcc	alternative TSS	0	0	1.27
NAcc	gene expression	0	0	1.28
NAcc	isoform ratio	1	0	1.29
NAcc	intron excision ratio	0	0	1.31
NAcc	mRNA stability	1	0	1.31
OFC	alternative polyA	0	0	1.1
OFC	alternative TSS	0	0	1.27
OFC	gene expression	0	0	1.25
OFC	isoform ratio	0	0	1.21
OFC	intron excision ratio	0	0	1.38
OFC	mRNA stability	0	0	1.26
PL	alternative polyA	0	0	1.23
PL	alternative TSS	0	0	1.32
PL	gene expression	0	0	1.28
PL	isoform ratio	3	0.1	1.28
PL	intron excision ratio	1	0	1.33
PL	mRNA stability	0	0	1.31
pVTA	alternative polyA	0	0	1.24
pVTA	alternative TSS	0	0	1.31
pVTA	gene expression	0	0	1.27
pVTA	isoform ratio	0	0	1.27
pVTA	intron excision ratio	0	0	1.28
pVTA	mRNA stability	0	0	1.3
RMTg	alternative polyA	0	0	1.22
RMTg	alternative TSS	0	0	1.25
RMTg	gene expression	1	0.1	1.26
RMTg	isoform ratio	0	0	1.28
RMTg	intron excision ratio	0	0	1.46
RMTg	mRNA stability	0	0	1.24