Hub : Traits

Bone: connectivity density

Tags: Physiology · Bone

Project: r01_doug_adams

0 loci · 0 genes with independent associations · 0 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.54
Adipose	alternative TSS	0	0	1.57
Adipose	gene expression	0	0	1.6
Adipose	isoform ratio	0	0	1.58
Adipose	intron excision ratio	0	0	1.51
Adipose	mRNA stability	0	0	1.57
BLA	alternative polyA	0	0	1.44
BLA	alternative TSS	0	0	1.72
BLA	gene expression	0	0	1.59
BLA	isoform ratio	0	0	1.57
BLA	intron excision ratio	0	0	1.63
BLA	mRNA stability	0	0	1.54
Brain	alternative polyA	0	0	1.55
Brain	alternative TSS	0	0	1.54
Brain	gene expression	0	0	1.56
Brain	isoform ratio	0	0	1.53
Brain	intron excision ratio	0	0	1.63
Brain	mRNA stability	0	0	1.52
Eye	alternative polyA	0	0	1.79
Eye	alternative TSS	0	0	1.53
Eye	gene expression	0	0	1.58
Eye	isoform ratio	0	0	1.67
Eye	intron excision ratio	0	0	1.74
Eye	mRNA stability	0	0	1.75
IL	alternative polyA	0	0	1.4
IL	alternative TSS	0	0	1.66
IL	gene expression	0	0	1.58
IL	isoform ratio	0	0	1.51
IL	intron excision ratio	0	0	1.73
IL	mRNA stability	0	0	1.52
LHb	alternative polyA	0	0	1.56
LHb	alternative TSS	0	0	1.76
LHb	gene expression	0	0	1.6
LHb	isoform ratio	0	0	1.4
LHb	intron excision ratio	0	0	1.62
LHb	mRNA stability	0	0	1.58
Liver	alternative polyA	0	0	1.45
Liver	alternative TSS	0	0	1.61
Liver	gene expression	0	0	1.59
Liver	isoform ratio	0	0	1.62
Liver	intron excision ratio	0	0	1.53
Liver	mRNA stability	0	0	1.56
NAcc	alternative polyA	0	0	1.4
NAcc	alternative TSS	0	0	1.54
NAcc	gene expression	0	0	1.57
NAcc	isoform ratio	0	0	1.65
NAcc	intron excision ratio	0	0	1.64
NAcc	mRNA stability	0	0	1.56
OFC	alternative polyA	0	0	1.45
OFC	alternative TSS	0	0	1.38
OFC	gene expression	0	0	1.57
OFC	isoform ratio	0	0	1.41
OFC	intron excision ratio	0	0	1.7
OFC	mRNA stability	0	0	1.55
PL	alternative polyA	0	0	1.52
PL	alternative TSS	0	0	1.54
PL	gene expression	0	0	1.57
PL	isoform ratio	0	0	1.54
PL	intron excision ratio	0	0	1.61
PL	mRNA stability	0	0	1.56