Hub : Traits

Soleus weight

Muscle

Tags: Physiology · Muscle

Project: lionikas_2014

15 loci · 26 genes with independent associations · 326 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes
1	chr2	47538581	49244363	13	1	2.30e-09	2.46e-08	4.53e-01	Mocs2
2	chr2	111268894	114237500	7	3	6.00e-09	4.44e-10	1.00e+00	Ect2 Fndc3b Pld1
3	chr2	115554411	119595215	52	1	3.67e-10	5.38e-10	1.00e+00	Gnb4
4	chr4	19000780	21703243	15	1	4.23e-12	2.33e-12	1.00e+00	LOC134486713
5	chr5	21900539	23299160	1	1	1.48e-07	9.78e-08	1.00e+00	Bpnt2
6	chr5	31288744	32685560	4	1	2.15e-08	1.94e-08	4.04e-02	Runx1t1
7	chr5	37161074	38681225	4	1	3.56e-08	9.63e-09	4.56e-02	Cpne3
8	chr5	142962736	144036879	3	1	3.39e-09	1.35e-02	1.78e-01	Stk40
9	chr5	170075070	170847497	1	1	9.96e-09	1.72e-02	2.80e-05	Arhgef16
10	chr6	56652686	59547170	7	1	1.56e-08	7.42e-09	2.67e-46	Hdac9
11	chr7	7178376	11501489	54	1	1.16e-07	2.18e-07	2.59e-01	Scamp4
12	chr8	77975074	86331121	152	7	3.77e-14	3.77e-14	1.00e+00	Cgnl1 Dnaaf4 Fam81a LOC120094203 Mindy2 Tmod2 Unc13c
13	chr8	111482194	113166330	2	1	1.01e-07	4.29e-08	1.24e-01	Amotl2
14	chr9	83390749	84777604	1	1	4.46e-76	4.06e-02	1.00e+00	Retreg2
15	chr20	5023775	6935766	10	4	1.61e-08	1.65e-08	1.00e+00	Ilrun LOC108349039 Snrpc Taf11

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes
BMI with tail	15.96	76	15	57.7	0.55	7.51e-35	Adam10 Ahr Aldh1a2 Ap3d1 Apc2 Aqp9 Arhgap45 Atosa Atp5f1d Bnip2 C7h19orf25 Cbarp Ccpg1 Cgnl1 Csnk1g2 Dnaaf4 Fam81a Fgf22 Gamt Gpx4 Grin3b Gtf2a2 Hdac9 Ice2 Izumo4 Khdc3 Lipc LOC103693140 LOC108351405 LOC120093775 LOC120094195 LOC120094203 LOC134479620 LOC134479811 LOC134480205 Midn Mier2 Mindy2 Mir628 Myo1e Myzap Ndufs7 Nedd4 Pcsk4 Pierce2 Pigb Plk5 Polr2m Polrmt Prtg Prtn3 Pwwp3a Pygo1 Rab27a Reep6 Retreg2 Rexo1 Rfx7 Rnf111 Rora Rpl37a-ps11 Rps15 Rsl24d1 Scamp4 Sf3a2 Sltm Spmap2 Tcf12 Tex9 Unc13c Wdr72 Zfp280d Zfp347 Zfp709l3 Zfp77 Znf431l4
BMI without tail	20575.43	6	1	3.8	0.84	1.78e-02	Amotl2 Itga1 Mocs2 Pelo Retreg2 Slco2a1
Body weight	4.56	40	1	3.8	0.99	2.33e-277	Adam10 Aldh1a2 Amotl2 Aqp9 Bnip2 Ccpg1 Cgnl1 Dnaaf4 Fam81a Gtf2a2 Ice2 Khdc3 Lipc LOC103693140 LOC120094195 LOC120094203 LOC134480205 Mindy2 Myo1e Myzap Nedd4 Pierce2 Pigb Polr2m Prtg Pygo1 Rab27a Retreg2 Rnf111 Rora Rpl37a-ps11 Rsl24d1 Slco2a1 Sltm Stk40 Tcf12 Tex9 Wdr72 Wwp1 Zfp280d
Epididymis fat weight	7240.22	7	6	23.1	0.63	1.14e-02	Ahr Ilrun LOC108349039 Pacsin1 Retreg2 Snrpc Taf11
Glucose	603.02	2	1	3.8	-0.95	5.26e-02	Retreg2 Stk40
Heart weight	13509	1	1	3.8	0	1.00e+00	Retreg2
Left kidney weight	141259.46	1	1	3.8	0	1.00e+00	Retreg2
Right kidney weight	116847.14	1	1	3.8	0	1.00e+00	Retreg2
Tail length	6144.67	8	1	3.8	0.67	6.31e-03	Amotl2 Ilrun LOC108349039 Pacsin1 Retreg2 Slco2a1 Snrpc Taf11
Length with tail	478.95	6	5	19.2	0.76	2.57e-03	Ilrun LOC108349039 Pacsin1 Retreg2 Snrpc Taf11
Length without tail	43106.49	3	1	3.8	0	1.00e+00	Adam10 Ilrun Retreg2
Liver weight, left	3638.11	2	1	3.8	-0.87	1.34e-01	Retreg2 Stk40
Liver weight, right	29.92	6	1	3.8	-0.11	7.15e-01	Ilrun LOC108349039 Pacsin1 Retreg2 Snrpc Taf11
Parametrial fat weight	615.65	1	1	3.8	0	1.00e+00	Retreg2
Retroperitoneal fat weight	16055.76	1	1	3.8	0	1.00e+00	Retreg2
Intraocular pressure	40071.91	1	1	3.8	0	1.00e+00	Retreg2
Extensor digitorum longus weight	17.76	77	37	142.3	0.74	3.28e-77	Adam10 Ahr Aldh1a2 Ap3d1 Apc2 Aqp9 Arhgap45 Arhgef16 Atp5f1d Bnip2 C7h19orf25 Cbarp Ccpg1 Cgnl1 Crppa Csnk1g2 Dnaaf4 Fam81a Fgf22 Gamt Gpx4 Grin3b Gtf2a2 Ice2 Izumo4 Khdc3 Lipc LOC103693140 LOC108351405 LOC120093775 LOC120094195 LOC120094203 LOC134479620 LOC134479811 LOC134480205 Midn Mier2 Mindy2 Mir628 Myo1e Myzap Ndufs7 Nedd4 Pcsk4 Pierce2 Pigb Plk5 Polr2m Polrmt Prtg Prtn3 Pwwp3a Pygo1 Rab27a Reep6 Retreg2 Rexo1 Rfx7 Rnf111 Rora Rpl37a-ps11 Rps15 Rsl24d1 Scamp4 Sf3a2 Sltm Spmap2 Stk40 Tcf12 Tex9 Unc13c Wdr72 Zfp280d Zfp347 Zfp709l3 Zfp77 Znf431l4
Tibialis anterior weight	23.37	55	41	157.7	0.62	4.81e-49	Adam10 Ahr Aldh1a2 Aqp9 Arhgef16 Atosa Bnip2 Ccpg1 Cgnl1 Crppa Dnaaf4 Fam81a Gtf2a2 Hdac9 Hmgcll1 Ice2 Khdc3 Leo1 Lipc LOC100912347 LOC103693140 LOC120094195 LOC120094203 LOC134480205 Lysmd2 Mindy2 Mir628 Myo1e Myo5c Myzap Nedd4 Onecut1 Pierce2 Pigb Polr2m Prtg Pygo1 Rab27a Retreg2 Rfx7 Rnf111 Rora Rpl37a-ps11 Rsl24d1 Runx1t1l Scg3 Sltm Stk40 Tcf12 Tex9 Tmod2 Tmod3 Unc13c Wdr72 Zfp280d
Tibia length	1633.98	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Number of licking bursts	157119.65	1	1	3.8	0	1.00e+00	Retreg2
Food consumed during 24 hour testing period	53116.13	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Times rat made contact with spout	305.36	1	1	3.8	0	1.00e+00	Retreg2
Mean time between licks in bursts	99756.16	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Mean num. licks in bursts	142600.29	1	1	3.8	0	1.00e+00	Retreg2
Std. dev. time between licks in bursts	94042.02	1	1	3.8	0	1.00e+00	Retreg2
Water consumed over 24 hours	103408.69	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging indifference point 0 sec	115003.89	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging indifference point AUC	133114.6	1	1	3.8	0	1.00e+00	Retreg2
Indifference point function ln k	142006.4	1	1	3.8	0	1.00e+00	Retreg2
Indifference point function log k	142006.4	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging total patch changes 0 sec	120264.14	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging total patch changes 12 sec	10848.8	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging total patch changes 18 sec	39260.73	2	1	3.8	0	1.00e+00	Retreg2 Stk40
Patch foraging total patch changes 24 sec	167090.22	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging total patch changes 6 sec	32639.62	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging time to switch 0 sec	156618.53	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging water rate 0 sec	148807.58	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging water rate 12 sec	161858.08	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging water rate 18 sec	103280.07	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging water rate 24 sec	4691.77	1	1	3.8	0	1.00e+00	Retreg2
Patch foraging water rate 6 sec	3954.86	1	1	3.8	0	1.00e+00	Retreg2
Locomotor activity	12.34	1	0	0	0	1.00e+00	Retreg2
Locomotor testing distance	44727.67	2	1	3.8	0	1.00e+00	Retreg2 Runx1t1
Locomotor testing rearing	38108.41	2	1	3.8	-0.9	1.03e-01	Retreg2 Stk40
Light reinforcement 1	155242.72	1	1	3.8	0	1.00e+00	Retreg2
Light reinforcement 2	107899.08	1	1	3.8	0	1.00e+00	Retreg2
Reaction time number correct	25581.66	4	1	3.8	-0.79	5.96e-02	Cpne3 Retreg2 Runx1t1l Wwp1
Reaction time mean minus median	205810.62	1	1	3.8	0	1.00e+00	Retreg2
Reaction time mean minus median AUC	104199.98	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Reaction time num false alarms	57075.22	1	1	3.8	0	1.00e+00	Retreg2
Reaction time num false alarms AUC	53251.82	2	1	3.8	0	1.00e+00	Retreg2 Stk40
Reaction time trials correct on left	25581.66	4	1	3.8	-0.79	5.96e-02	Cpne3 Retreg2 Runx1t1l Wwp1
Reaction time trials on left	30002.29	3	1	3.8	-0.83	8.44e-02	Cpne3 Retreg2 Wwp1
Reaction time mean	94380.53	1	1	3.8	0	1.00e+00	Retreg2
Reaction time mean AUC	113341.21	1	1	3.8	0	1.00e+00	Retreg2
Median of all reaction times	15718.31	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Reaction time omissions	34267.91	1	1	3.8	0	1.00e+00	Retreg2
Reaction time false alarm rate	891.26	1	1	3.8	0	1.00e+00	Retreg2
Reaction time premature initiation rate	18448.02	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Reaction time premature initiations	69362.44	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Std. dev. reaction times	74746.3	2	1	3.8	0	1.00e+00	Pacsin1 Retreg2
Reaction time trials completed	30002.29	3	1	3.8	-0.83	8.44e-02	Cpne3 Retreg2 Wwp1
Reaction time trials AUC	30343.37	3	1	3.8	-0.83	8.44e-02	Cpne3 Retreg2 Wwp1
Social response proportion	35302.65	1	1	3.8	0	1.00e+00	Retreg2
Social responses	2847.14	2	1	3.8	0	1.00e+00	Retreg2 Zfp347
Social time	44238.34	1	1	3.8	0	1.00e+00	Retreg2
Conditioned locomotion	3051.71	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Cocaine response after cond. corrected	65812.39	1	1	3.8	0	1.00e+00	Retreg2
Cocaine response after cond. not corrected	32130.37	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Cocaine response before conditioning	2800.41	1	1	3.8	0	1.00e+00	Retreg2
Saline control response	12962.78	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. active minus inactive responses	53410.48	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. active-inactive response ratio	91582.24	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. active responses	9691.24	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. inactive responses	42106.18	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. lever presses	15873.43	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. lever reinforcers received	2000.77	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. lever latency	10912.53	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. magazine entry latency	49418.79	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. change in total contacts	114781.94	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. index score	47988.08	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. latency score	58476.16	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. lever contacts	22069.78	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. magazine entry number	16773.11	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. intertrial magazine entries	104933.78	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. lever-magazine prob. diff.	22441.38	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Pavlov. Cond. response bias	2590.7	2	1	3.8	0	1.00e+00	Itga1 Retreg2
Conditioned reinforcement - actives	191492.54	1	1	3.8	0	1.00e+00	Retreg2
Conditioned reinforcement - inactives	155032.91	1	1	3.8	0	1.00e+00	Retreg2
Conditioned locomotion	41346.85	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access intake day 1-15 change	210605.99	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access intake escalation	209543.53	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access intake escalation 2	107995.31	1	1	3.8	0	1.00e+00	Retreg2
Intermitt. access day 1 inactive lever presses	236542.72	1	1	3.8	0	1.00e+00	Retreg2
Intermitt. access day 15 inactive lever presses	208241.66	1	1	3.8	0	1.00e+00	Retreg2
Intermitt. access escalation Index	184996.65	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access day 1 total infusions	77765.54	2	1	3.8	0	1.00e+00	Pld1 Retreg2
Intermittent access day 15 total infusions	131485.34	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access terminal intake (last 3 days)	83205.14	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access total infusions	675.9	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access day 1 locomotion	104459.41	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access day 15 total locomotion	177836.92	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access total locomotion	711.59	1	1	3.8	0	1.00e+00	Retreg2
Intermittent access standard deviation	201906.25	1	1	3.8	0	1.00e+00	Retreg2
Cocaine induced anxiety	80144.15	2	1	3.8	0	1.00e+00	Retreg2 Runx1t1
Post-drug Anxiety	20460.83	1	1	3.8	0	1.00e+00	Retreg2
Baseline Anxiety	103471.3	1	1	3.8	0	1.00e+00	Retreg2
Lifetime Intake	6830.03	1	1	3.8	0	1.00e+00	Retreg2
Incentive Sensitization - Responses	163579.25	1	1	3.8	0	1.00e+00	Retreg2
Incentive Sensitization - Breakpoint	142790.8	1	1	3.8	0	1.00e+00	Retreg2
Progressive ratio test 1 active lever presses	99872.69	1	1	3.8	0	1.00e+00	Retreg2
Progressive ratio test 1 breakpoint	96247.61	1	1	3.8	0	1.00e+00	Retreg2
Progressive ratio test 1 inactive lever presses	151100.07	1	1	3.8	0	1.00e+00	Retreg2
Progressive ratio test 2 active lever presses	57222.6	1	1	3.8	0	1.00e+00	Retreg2
Progressive ratio test 2 breakpoint	34975.96	1	1	3.8	0	1.00e+00	Retreg2
Progressive ratio test 2 inactive lever presses	164104.71	1	1	3.8	0	1.00e+00	Retreg2
Total sessions with >9 infusions	7953.9	1	1	3.8	0	1.00e+00	Retreg2
Short access day 1 total inactive lever presses	114392.27	1	1	3.8	0	1.00e+00	Retreg2
Short access day 10 total inactive lever presses	217140.65	1	1	3.8	0	1.00e+00	Retreg2
Short access day 1 total infusions	111479.43	1	1	3.8	0	1.00e+00	Retreg2
Short access day 10 total infusions	76293.54	1	1	3.8	0	1.00e+00	Retreg2
Short access total infusions	33946.03	1	1	3.8	0	1.00e+00	Retreg2
Short access day 1 locomotion	84055.65	1	1	3.8	0	1.00e+00	Retreg2
Short access day 10 total locomotion	181597.84	1	1	3.8	0	1.00e+00	Retreg2
Short access total locomotion	68266.59	1	1	3.8	0	1.00e+00	Retreg2
Compulsive drug intake	65439.45	1	1	3.8	0	1.00e+00	Retreg2
One hour access (0.3 mA shock)	9669.44	1	1	3.8	0	1.00e+00	Retreg2
One hour access (shock baseline)	140263.4	1	1	3.8	0	1.00e+00	Retreg2
Number of responses in last shaping day	51289.19	1	1	3.8	0	1.00e+00	Retreg2
Context. condit. distance diff. score	970.59	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, session 1	14615.25	1	1	3.8	0	1.00e+00	Retreg2
Locomotion distance, session 1	4416.18	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, session 2	9358	1	1	3.8	0	1.00e+00	Retreg2
Locomotion distance, session 2	2393.66	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, session 3	2332.53	1	1	3.8	0	1.00e+00	Retreg2
Locomotion distance, session 3	16615.78	1	1	3.8	0	1.00e+00	Retreg2
Stereotopy head waving bouts, day 3	5866.4	1	1	3.8	0	1.00e+00	Retreg2
Stereotopy head waving duration, day 3	12131.92	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, session 7	1310.17	1	1	3.8	0	1.00e+00	Retreg2
Locomotion distance, session 7	3744.54	1	1	3.8	0	1.00e+00	Retreg2
Stereotopy head waving bouts, day 7	10466.92	1	1	3.8	0	1.00e+00	Retreg2
Stereotopy head waving duration, day 7	8847.36	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, session 8	1892.98	1	1	3.8	0	1.00e+00	Retreg2
Locomotion distance, session 8	673.32	1	1	3.8	0	1.00e+00	Retreg2
Degree of sensitization distance	15309.16	1	1	3.8	0	1.00e+00	Retreg2
Degree of sensitization stereotypy	8496.38	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. active minus inactive responses	4120.78	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. active-inactive response ratio	1097.66	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. active responses	11664.93	1	1	3.8	0	1.00e+00	Retreg2
Condit. Reinf. inactive responses	19375.3	1	1	3.8	0	1.00e+00	Retreg2
Incentive salience index mean	3710.6	2	2	7.7	0.92	7.92e-02	Retreg2 Stk40
Condit. Reinf. lever presses	5369.74	2	1	3.8	0.91	8.69e-02	Retreg2 Stk40
Time in familiar zone, hab. session 1	41873.03	1	1	3.8	0	1.00e+00	Retreg2
Time in novel zone, hab. session 1	35522.88	1	1	3.8	0	1.00e+00	Retreg2
Total zone transitions, hab. session 1	1818.53	1	1	3.8	0	1.00e+00	Retreg2
Total locomotion distance, hab. session 1	1687	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, hab. session 1	1131.06	1	1	3.8	0	1.00e+00	Retreg2
Time in familiar zone, hab. session 2	23379.25	1	1	3.8	0	1.00e+00	Retreg2
Time in novel zone, hab. session 2	24924.95	1	1	3.8	0	1.00e+00	Retreg2
Total zone transitions, hab. session 2	280.53	1	1	3.8	0	1.00e+00	Retreg2
Total locomotion distance, hab. session 2	96.8	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, hab. session 2	145.53	1	1	3.8	0	1.00e+00	Retreg2
Novel to familiar place preference ratio	55508.81	1	1	3.8	0	1.00e+00	Retreg2
Novelty place preference	13605.77	4	1	3.8	1	1.19e-04	LOC120100791 Pld1 Retreg2 Tnik
Time in novel zone, NPP test	5118.47	5	1	3.8	0.85	7.36e-03	Egfem1 LOC120100791 Pld1 Retreg2 Tnik
Total zone transitions, NPP test	8230.03	1	1	3.8	0	1.00e+00	Retreg2
Total locomotion distance, NPP test	7114	1	1	3.8	0	1.00e+00	Retreg2
Locomotion velocity, NPP test	4041.22	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. lever latency	2195.61	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. change in total contacts	4539.35	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. index score	1769.33	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. latency score	1841.19	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. lever contacts	3029.77	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. magazine entry number	2162.19	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. intertrial magazine entries	524.02	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. lever-magazine prob. diff.	1940.27	1	1	3.8	0	1.00e+00	Retreg2
Pavlov. Cond. response bias	2606.99	1	1	3.8	0	1.00e+00	Retreg2
Bone: apparent density	7428.9	2	1	3.8	0	1.00e+00	Retreg2 Stk40
Bone surface	6288.69	2	1	3.8	0.91	9.23e-02	Retreg2 Stk40
Bone volume	8472.13	2	2	7.7	0.91	8.91e-02	Retreg2 Stk40
Bone: connectivity density	7098.55	1	1	3.8	0	1.00e+00	Retreg2
Bone: cortical apparent density	45266.32	1	1	3.8	0	1.00e+00	Retreg2
Bone: cortical area	18930.98	1	1	3.8	0	1.00e+00	Retreg2
Bone: cortical porosity	1837.29	1	1	3.8	0	1.00e+00	Retreg2
Bone: cortical porosity	4807.78	1	1	3.8	0	1.00e+00	Retreg2
Bone: cortical thickness	1627.26	1	1	3.8	0	1.00e+00	Retreg2
Bone: cortical thickness	12190.6	1	1	3.8	0	1.00e+00	Retreg2
Bone: cortical tissue density	48453.42	1	1	3.8	0	1.00e+00	Retreg2
Bone: elastic displacement	29626.25	1	1	3.8	0	1.00e+00	Retreg2
Bone: elastic work	1494.59	1	1	3.8	0	1.00e+00	Retreg2
Bone: endosteal estimation	5882.75	3	1	3.8	0.83	4.25e-02	Ilrun LOC108349039 Retreg2
Bone: endosteal perimeter	44697.39	1	1	3.8	0	1.00e+00	Retreg2
Bone: final force	7031.22	1	1	3.8	0	1.00e+00	Retreg2
Bone: final moment	1042.62	1	1	3.8	0	1.00e+00	Retreg2
Bone: marrow area	6184.31	3	1	3.8	0.83	4.29e-02	Ilrun LOC108349039 Retreg2
Bone: maximum diameter	12205.42	2	1	3.8	0	1.00e+00	Retreg2 Runx1t1l
Bone: maximum force	34553.99	1	1	3.8	0	1.00e+00	Retreg2
Bone: maximum moment	24715.64	1	1	3.8	0	1.00e+00	Retreg2
Bone: minimum diameter	17196.64	1	1	3.8	0	1.00e+00	Retreg2
Bone: periosteal estimation	38190.5	1	1	3.8	0	1.00e+00	Retreg2
Bone: periosteal perimeter	43183.28	1	1	3.8	0	1.00e+00	Retreg2
Bone: post-yield work	50847.58	1	1	3.8	0	1.00e+00	Retreg2
Bone: stiffness	35564.91	1	1	3.8	0	1.00e+00	Retreg2
Bone: tissue strength	12264.67	1	1	3.8	0	1.00e+00	Retreg2
Bone: trabecular number	41138.39	1	1	3.8	0	1.00e+00	Retreg2
Bone: trabecular spacing	31287.85	1	1	3.8	0	1.00e+00	Retreg2
Bone: trabecular thickness	33264.33	1	1	3.8	0	1.00e+00	Retreg2
Bone: trabecular tissue density	5370.97	5	1	3.8	0.71	2.05e-02	Ccpg1 Nedd4 Pigb Retreg2 Tex9
Breakpoint value in progressive ratio session	112428.06	1	1	3.8	0	1.00e+00	Retreg2
Distance traveled before self-admin	134013.73	1	1	3.8	0	1.00e+00	Retreg2
Distance traveled after self-admin	100820.36	1	1	3.8	0	1.00e+00	Retreg2
Delta time in closed arm before/after self-admin	1271.86	1	1	3.8	0	1.00e+00	Retreg2
Delta time in open arm before/after self-admin	54811.83	1	1	3.8	0	1.00e+00	Retreg2
Diff in mean of infusions in LGA sessions	108490.77	1	1	3.8	0	1.00e+00	Retreg2
Extinction: sum of active levers before priming	45807.87	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Active lever presses in extinction session 6	3117.3	1	1	3.8	0	1.00e+00	Retreg2
Delta distance traveled before/after self-admin	12434.77	1	1	3.8	0	1.00e+00	Retreg2
Delta ambulatory time before/after self-admin	96034.01	1	1	3.8	0	1.00e+00	Retreg2
Time in closed arm before self-admin	88239.28	1	1	3.8	0	1.00e+00	Retreg2
Time in closed arm after self-admin	19471.75	1	1	3.8	0	1.00e+00	Retreg2
Time in open arm before self-admin	34587.99	1	1	3.8	0	1.00e+00	Retreg2
Time in open arm after self-admin	1894.09	1	1	3.8	0	1.00e+00	Retreg2
Sum of active levers in priming session hrs 5-6	3877.89	1	1	3.8	0	1.00e+00	Retreg2
Time to tail flick, vehicle, before self-admin	51335.42	1	1	3.8	0	1.00e+00	Retreg2
Time to tail flick, vehicle, after self-admin	118286.85	1	1	3.8	0	1.00e+00	Retreg2
Time to tail flick, test, before self-admin	16425.15	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Time to tail flick, test, after self-admin	2925.35	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Delta time to tail flick, vehicle, before/after SA	36533.83	1	1	3.8	0	1.00e+00	Retreg2
Delta time to tail flick, test, before/after SA	56832.34	1	1	3.8	0	1.00e+00	Retreg2
Ambulatory time before self-admin	171079.71	1	1	3.8	0	1.00e+00	Retreg2
Ambulatory time after self-admin	88230.17	1	1	3.8	0	1.00e+00	Retreg2
Total heroin consumption	495.21	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Area under the delay curve	40819.59	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Delay disc. indifference point, 0s delay	9477.47	1	1	3.8	0	1.00e+00	Retreg2
Delay disc. indifference point, 16s delay	37410.18	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Delay disc. indifference point, 2s delay	425.55	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Delay disc. indifference point, 24s delay	99983.64	1	1	3.8	0	1.00e+00	Retreg2
Delay disc. indifference point, 4s delay	2525.7	1	1	3.8	0	1.00e+00	Retreg2
Delay disc. indifference point, 8s delay	50743.74	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Delay discount exponential model param	30131.71	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Delay discount hyperbolic model param	22878.48	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Fecal boli incidents, locomotor time 1	150160.89	1	1	3.8	0	1.00e+00	Retreg2
Change in fecal boli incidents, locomotor task	23481.3	1	1	3.8	0	1.00e+00	Retreg2
Time >=10cm from walls, locomotor time 1	49255.61	1	1	3.8	0	1.00e+00	Retreg2
Bouts of movement, locomotor time 1	41590.88	1	1	3.8	0	1.00e+00	Retreg2
Total resting periods, locomotor time 1	11802.64	1	1	3.8	0	1.00e+00	Retreg2
Rest time, locomotor task time 1	75951.88	1	1	3.8	0	1.00e+00	Retreg2
Distance moved, locomotor task time 1	159283.67	1	1	3.8	0	1.00e+00	Retreg2
Vertical activity count, locomotor time 1	219061.96	1	1	3.8	0	1.00e+00	Retreg2
Time >=10cm from walls, locomotor time 2	161986.9	1	1	3.8	0	1.00e+00	Retreg2
Bouts of movement, locomotor time 2	174298.32	1	1	3.8	0	1.00e+00	Retreg2
Total resting periods, locomotor time 2	190079.87	1	1	3.8	0	1.00e+00	Retreg2
Rest time, locomotor task time 2	83778.18	1	1	3.8	0	1.00e+00	Retreg2
Distance moved, locomotor task time 2	34268.85	1	1	3.8	0	1.00e+00	Retreg2
Vertical activity count, locomotor time 2	138414.05	1	1	3.8	0	1.00e+00	Retreg2
Weight adjusted by age	161973.18	1	1	3.8	0	1.00e+00	Retreg2
Seeking ratio, delayed vs. immediate footshock	49395.56	1	1	3.8	0	1.00e+00	Retreg2
Locomotion in novel chamber	16301.47	1	1	3.8	0	1.00e+00	Retreg2
Locomotion in novel chamber post-restriction	154642.04	1	1	3.8	0	1.00e+00	Retreg2
Progressive ratio	157894.89	1	1	3.8	0	1.00e+00	Retreg2
Food seeking constrained by brief footshock	7338.76	1	1	3.8	0	1.00e+00	Retreg2
Seeking ratio, punishment vs. effort	118281.2	1	1	3.8	0	1.00e+00	Retreg2
Run reversals in cocaine runway, females	37174.37	1	1	3.8	0	1.00e+00	Retreg2
Run reversals in cocaine runway, males	29861.56	1	1	3.8	0	1.00e+00	Retreg2
Latency to leave start box in cocaine runway	58575.8	1	1	3.8	0	1.00e+00	Retreg2
Latency to leave start box in cocaine runway, F	14200.04	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Latency to leave start box in cocaine runway, M	7140.1	1	1	3.8	0	1.00e+00	Retreg2
Co content in liver	4721.74	1	1	3.8	0	1.00e+00	Retreg2
Cu content in liver	92.59	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Fe content in liver	5656.2	1	1	3.8	0	1.00e+00	Retreg2
K content in liver	3343.42	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Mg content in liver	12257.29	2	1	3.8	0	1.00e+00	Arhgef16 Retreg2
Mn content in liver	4374.36	1	1	3.8	0	1.00e+00	Retreg2
Na content in liver	8336.38	2	2	7.7	0	1.00e+00	Arhgef16 Retreg2
Rb content in liver	120.8	2	1	3.8	-0.99	7.65e-03	Retreg2 Stk40
Sr content in liver	87.89	2	2	7.7	0.72	2.84e-01	Arhgef16 Stk40
Zn content in liver	15755.62	1	1	3.8	0	1.00e+00	Retreg2

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	10	0.3	2.77
Adipose	alternative TSS	15	0.4	2.89
Adipose	gene expression	25	0.3	2.9
Adipose	isoform ratio	16	0.3	2.87
Adipose	intron excision ratio	5	0.2	3.47
Adipose	mRNA stability	18	0.4	2.95
BLA	alternative polyA	9	0.4	3
BLA	alternative TSS	5	0.2	2.92
BLA	gene expression	19	0.3	3
BLA	isoform ratio	15	0.5	3.11
BLA	intron excision ratio	6	0.2	3.05
BLA	mRNA stability	12	0.5	3.1
Brain	alternative polyA	14	0.4	2.98
Brain	alternative TSS	10	0.2	3.06
Brain	gene expression	33	0.3	2.93
Brain	isoform ratio	18	0.3	3.02
Brain	intron excision ratio	13	0.2	3.17
Brain	mRNA stability	14	0.3	2.95
Eye	alternative polyA	0	0	3.31
Eye	alternative TSS	3	0.7	3.2
Eye	gene expression	3	0.2	3.15
Eye	isoform ratio	1	0.2	3.05
Eye	intron excision ratio	3	0.3	3.23
Eye	mRNA stability	0	0	2.83
IC	alternative polyA	6	0.3	2.83
IC	alternative TSS	4	0.2	3.08
IC	gene expression	17	0.3	3.04
IC	isoform ratio	7	0.3	2.89
IC	intron excision ratio	6	0.2	3
IC	mRNA stability	6	0.4	2.97
IL	alternative polyA	3	0.3	3
IL	alternative TSS	0	0	2.72
IL	gene expression	11	0.3	2.99
IL	isoform ratio	5	0.4	3.15
IL	intron excision ratio	0	0	2.74
IL	mRNA stability	5	0.4	3.06
LHb	alternative polyA	4	0.4	2.88
LHb	alternative TSS	0	0	2.57
LHb	gene expression	12	0.3	3.02
LHb	isoform ratio	3	0.2	2.65
LHb	intron excision ratio	4	0.3	2.96
LHb	mRNA stability	3	0.2	3
Liver	alternative polyA	9	0.4	2.76
Liver	alternative TSS	11	0.4	2.88
Liver	gene expression	23	0.3	2.92
Liver	isoform ratio	11	0.3	2.91
Liver	intron excision ratio	4	0.1	3.03
Liver	mRNA stability	9	0.3	3
NAcc	alternative polyA	9	0.3	2.98
NAcc	alternative TSS	6	0.2	2.97
NAcc	gene expression	33	0.3	3.04
NAcc	isoform ratio	20	0.4	3.08
NAcc	intron excision ratio	19	0.3	2.91
NAcc	mRNA stability	14	0.4	3.08
OFC	alternative polyA	1	0.1	2.92
OFC	alternative TSS	2	0.3	3.18
OFC	gene expression	8	0.2	2.98
OFC	isoform ratio	6	0.4	2.83
OFC	intron excision ratio	1	0.1	3.1
OFC	mRNA stability	6	0.5	3.09
PL	alternative polyA	13	0.4	2.94
PL	alternative TSS	9	0.3	3.02
PL	gene expression	23	0.2	2.93
PL	isoform ratio	19	0.4	3.06
PL	intron excision ratio	9	0.2	2.83
PL	mRNA stability	15	0.4	3.07
pVTA	alternative polyA	7	0.3	2.99
pVTA	alternative TSS	6	0.2	3.11
pVTA	gene expression	24	0.3	3.05
pVTA	isoform ratio	13	0.4	3.01
pVTA	intron excision ratio	9	0.2	2.84
pVTA	mRNA stability	7	0.3	3.09
RMTg	alternative polyA	6	0.9	3.26
RMTg	alternative TSS	1	0.2	2.69
RMTg	gene expression	14	0.7	3.1
RMTg	isoform ratio	4	0.5	3.03
RMTg	intron excision ratio	0	0	3.13
RMTg	mRNA stability	4	0.6	2.98