Hub : Traits

Tibia length

Tags: Physiology · Bone

Project: lionikas_2014

12 loci · 37 genes with independent associations · 432 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes
1	chr1	195840684	197231379	2	2	3.72e-08	9.87e-08	8.33e-03	Chst15
2	chr3	75048537	76416396	1	1	1.25e-07	2.63e-07	1.00e+00	Erich2
3	chr3	107934079	108540443	1	1	1.35e-12	3.19e-02	1.09e-78	Prr5l
4	chr7	28462991	32566822	36	15	2.28e-10	2.66e-10	0.00e+00	Cep83 Cfap54 Fgd6 LOC108351432 LOC134479659 LOC134479863 Lta4h Ndufa12 Nedd1 Nr2c1 Ntn4 Tmcc3 Vezt
5	chr8	117463629	118343328	1	1	8.79e-14	6.65e-02	1.00e+00	Mst1
6	chr8	119067995	120669374	2	1	1.58e-07	3.90e-07	3.40e-01	Lrrfip2
7	chr9	83390749	84777604	1	1	0.00e+00	4.41e-01	1.00e+00	Retreg2
8	chr10	103498083	107706829	343	7	4.05e-14	2.37e-14	NaN	Aatk C1qtnf1 Cbx2 Cep131 LOC108352165 Slc25a10 Tbc1d16
9	chr12	5367829	6763187	1	1	1.24e-07	5.01e-06	7.03e-01	LOC134481143
10	chr14	98506917	99904851	1	1	1.91e-07	2.13e-06	1.00e+00	Lgalsl
11	chr14	99985577	101883483	12	1	1.58e-08	3.38e-08	3.53e-01	LOC102552414
12	chr15	53577411	57359085	31	5	7.97e-09	4.05e-09	1.00e+00	Itm2b Lrch1 Nudt15 Rcbtb2

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes
BMI with tail	643.95	5	1	2.7	-1	1.39e-08	Lta4h Plxnc1 Prr5l Retreg2 Vezt
BMI without tail	3352.73	15	2	5.4	0.94	6.22e-21	Cdk17 Cep83 Fgd6 LOC108351432 LOC134479863 LOC134481143 Lta4h Metap2 Mir331 Ndufa12 Nr2c1 Plxnc1 Prr5l Retreg2 Vezt
Body weight	9.32	60	26	70.3	0.63	3.27e-22	Aatk Als2cl Alyref Amdhd1 B3gnt2 B3gntl1 Baiap2 Ccdc137 Ccdc38 Ccdc57 Cdk17 Cep131 Cep83 Cfap54 Eif4a3 Endov Fasn Fgd6 Gaa Gcgr Gps1 LOC102552414 LOC103693493 LOC108351432 LOC108352165 LOC120093559 LOC120095223 LOC120095311 LOC134479659 LOC134479863 LOC134480921 LOC134481143 Lrrfip2 Lta4h Mcrip1 Metap2 Mir331 Mst1 Ndufa12 Nedd1 Nr2c1 Ntn4 Pcyt2 Pde6g Plxnc1 Prr5l Ptchd3 Retreg2 Rnf213 Rpl28l3 Sgsh Slc16a3 Slc25a10 Slc38a10 Snrpf Tmcc3 Tmem17 Tspan10 Vezt Zfp950l6
Epididymis fat weight	54228.13	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Glucose	623.51	4	2	5.4	-0.96	3.92e-02	B3gntl1 Fn3k Mst1 Retreg2
Heart weight	13509	1	1	2.7	0	1.00e+00	Retreg2
Left kidney weight	1704.94	22	8	21.6	-0.86	4.63e-25	Amdhd1 Ccdc38 Cdk17 Cep83 Fgd6 LOC108351432 LOC134479863 LOC134481143 Lta4h Metap2 Mir331 Ndufa12 Nedd1 Nr2c1 Ntn4 Plxnc1 Prr5l Retreg2 Snrpf Tmcc3 Tmem17 Vezt
Right kidney weight	1625.89	23	3	8.1	-0.87	2.79e-23	Amdhd1 B3gnt2 Ccdc38 Cdk17 Cep83 Fgd6 Lgalsl LOC102552414 LOC108351432 LOC134479863 LOC134481143 Lta4h Metap2 Mir331 Mst1 Ndufa12 Nr2c1 Ntn4 Plxnc1 Retreg2 Snrpf Tmem17 Vezt
Tail length	370.35	61	20	54.1	0.81	9.57e-59	Aatk Alyref Amdhd1 Arhgdia Baiap2 Card14 Cbx8 Ccdc137 Ccdc38 Ccdc57 Cd7 Cdk17 Cep131 Cep83 Cfap54 Chmp6 Eif4a3 Endov Fgd6 Fscn2 Gaa Gcgr Hgs LOC100912167 LOC103693493 LOC108351432 LOC108352165 LOC120093559 LOC120095223 LOC120095311 LOC134479659 LOC134479863 LOC134481143 Lta4h Mcrip1 Metap2 Mir331 Ndufa12 Ndufaf8 Nedd1 Npb Nploc4 Nptx1 Nr2c1 Ntn4 Oxld1 Pcyt2 Pde6g Plxnc1 Retreg2 Rfng Rnf213 Rptor Sgsh Slc16a3 Slc25a10 Slc38a10 Snrpf Tmcc3 Tspan10 Vezt
Length with tail	61.69	45	26	70.3	0.98	1.94e-86	Aatk Als2cl Amdhd1 B3gnt2 Baiap2 Cbx8 Ccdc137 Ccdc38 Cdk17 Cep83 Cfap54 Commd1 Eif4a3 Endov Fgd6 Gaa LOC102551272 LOC102552414 LOC108351432 LOC108352165 LOC120093559 LOC134479659 LOC134479863 LOC134481143 Lrrfip2 Lta4h Metap2 Mir331 Mst1 Ndufa12 Nedd1 Nptx1 Nr2c1 Ntn4 Plxnc1 Retreg2 Rnf213 Rptor Sgsh Slc38a10 Snrpf Tbc1d16 Tmcc3 Tmem17 Vezt
Length without tail	1491.77	25	15	40.5	-0.84	1.68e-24	Als2cl Amdhd1 Ccdc38 Cdk17 Cep83 Cfap54 Fgd6 LOC108351432 LOC120093559 LOC134479659 LOC134479863 LOC134481143 Lrrfip2 Lta4h Metap2 Mir331 Mst1 Ndufa12 Nr2c1 Ntn4 Plxnc1 Retreg2 Snrpf Tmcc3 Vezt
Liver weight, left	1824.75	4	2	5.4	-0.97	8.39e-05	Mst1 Ndufa12 Nr2c1 Retreg2
Liver weight, right	143.89	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Parametrial fat weight	615.65	1	1	2.7	0	1.00e+00	Retreg2
Retroperitoneal fat weight	91.29	37	2	5.4	0.9	9.28e-69	Aatk Alyref Anapc11 Arhgdia Baiap2 Card14 Ccdc137 Ccdc57 Cep131 Chmp6 Eif4a3 Endov Fgd6 Gaa Gcgr LOC103693493 LOC108352165 LOC120095223 LOC120095311 Mcrip1 Mst1 Ndufaf8 Npb Nploc4 Nr2c1 Oxld1 Pcyt2 Pde6g Retreg2 Rfng Rnf213 Rptor Sgsh Slc25a10 Slc38a10 Tepsin Tspan10
Intraocular pressure	40071.91	1	1	2.7	0	1.00e+00	Retreg2
Extensor digitorum longus weight	166.06	9	1	2.7	0.9	5.28e-11	Cysltr2 Fndc3a Itm2b LOC134481143 Lpar6 Med4 Nudt15 Rcbtb2 Retreg2
Soleus weight	15.81	4	1	2.7	0.69	1.90e-02	Fndc3a Nudt15 Rcbtb2 Retreg2
Tibialis anterior weight	1634.02	3	2	5.4	0	1.00e+00	LOC134481143 Prr5l Retreg2
Number of licking bursts	157119.65	1	1	2.7	0	1.00e+00	Retreg2
Food consumed during 24 hour testing period	106196.53	1	1	2.7	0	1.00e+00	Retreg2
Times rat made contact with spout	305.36	1	1	2.7	0	1.00e+00	Retreg2
Mean time between licks in bursts	199507.71	1	1	2.7	0	1.00e+00	Retreg2
Mean num. licks in bursts	142600.29	1	1	2.7	0	1.00e+00	Retreg2
Std. dev. time between licks in bursts	94042.02	1	1	2.7	0	1.00e+00	Retreg2
Water consumed over 24 hours	103408.69	1	1	2.7	0	1.00e+00	Retreg2
Patch foraging indifference point 0 sec	115003.89	1	1	2.7	0	1.00e+00	Retreg2
Patch foraging indifference point AUC	44390.72	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Indifference point function ln k	71040.92	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Indifference point function log k	71040.92	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Patch foraging total patch changes 0 sec	120264.14	1	1	2.7	0	1.00e+00	Retreg2
Patch foraging total patch changes 12 sec	3637.8	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Patch foraging total patch changes 18 sec	58889.67	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Patch foraging total patch changes 24 sec	83554.6	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Patch foraging total patch changes 6 sec	16325.11	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Patch foraging time to switch 0 sec	78318.27	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Patch foraging water rate 0 sec	74407.85	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Patch foraging water rate 12 sec	161858.08	1	1	2.7	0	1.00e+00	Retreg2
Patch foraging water rate 18 sec	51645.28	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Patch foraging water rate 24 sec	4691.77	1	1	2.7	0	1.00e+00	Retreg2
Patch foraging water rate 6 sec	3954.86	1	1	2.7	0	1.00e+00	Retreg2
Locomotor activity	15.72	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Locomotor testing distance	44732.22	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Locomotor testing rearing	76214.5	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Light reinforcement 1	155242.72	1	1	2.7	0	1.00e+00	Retreg2
Light reinforcement 2	53965.57	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Reaction time number correct	153465.22	1	1	2.7	0	1.00e+00	Retreg2
Reaction time mean minus median	205810.62	1	1	2.7	0	1.00e+00	Retreg2
Reaction time mean minus median AUC	104201.52	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Reaction time num false alarms	28542.61	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Reaction time num false alarms AUC	106496.51	1	1	2.7	0	1.00e+00	Retreg2
Reaction time trials correct on left	153465.22	1	1	2.7	0	1.00e+00	Retreg2
Reaction time trials on left	149991.58	1	1	2.7	0	1.00e+00	Retreg2
Reaction time mean	94380.53	1	1	2.7	0	1.00e+00	Retreg2
Reaction time mean AUC	113341.21	1	1	2.7	0	1.00e+00	Retreg2
Median of all reaction times	31417.12	1	1	2.7	0	1.00e+00	Retreg2
Reaction time omissions	34267.91	1	1	2.7	0	1.00e+00	Retreg2
Reaction time false alarm rate	891.26	1	1	2.7	0	1.00e+00	Retreg2
Reaction time premature initiation rate	36877.02	1	1	2.7	0	1.00e+00	Retreg2
Reaction time premature initiations	138718.63	1	1	2.7	0	1.00e+00	Retreg2
Std. dev. reaction times	74746.42	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Reaction time trials completed	149991.58	1	1	2.7	0	1.00e+00	Retreg2
Reaction time trials AUC	151696.42	1	1	2.7	0	1.00e+00	Retreg2
Social response proportion	17657.99	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Social responses	1905.06	3	1	2.7	0	1.00e+00	Mst1 Prr5l Retreg2
Social time	22125.12	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Conditioned locomotion	6074.35	1	1	2.7	0	1.00e+00	Retreg2
Cocaine response after cond. corrected	65812.39	1	1	2.7	0	1.00e+00	Retreg2
Cocaine response after cond. not corrected	64247.35	1	1	2.7	0	1.00e+00	Retreg2
Cocaine response before conditioning	2800.41	1	1	2.7	0	1.00e+00	Retreg2
Saline control response	6522.43	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. active minus inactive responses	26712.34	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. active-inactive response ratio	91582.24	1	1	2.7	0	1.00e+00	Retreg2
Condit. Reinf. active responses	4856.3	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. inactive responses	21067.54	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. lever presses	7960.29	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. lever reinforcers received	1007.39	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. lever latency	3648.25	3	1	2.7	0	1.00e+00	Mst1 Prr5l Retreg2
Pavlov. Cond. magazine entry latency	24773.4	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. change in total contacts	114781.94	1	1	2.7	0	1.00e+00	Retreg2
Pavlov. Cond. index score	24017.04	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. latency score	29259.45	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. lever contacts	7372.88	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Pavlov. Cond. magazine entry number	8453.95	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. intertrial magazine entries	52501.71	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. lever-magazine prob. diff.	22461.1	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. response bias	2629.8	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Conditioned reinforcement - actives	191492.54	1	1	2.7	0	1.00e+00	Retreg2
Conditioned reinforcement - inactives	77543.68	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Conditioned locomotion	41346.85	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access intake day 1-15 change	105304.97	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Intermittent access intake escalation	104773.43	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Intermittent access intake escalation 2	107995.31	1	1	2.7	0	1.00e+00	Retreg2
Intermitt. access day 1 inactive lever presses	118279.42	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Intermitt. access day 15 inactive lever presses	208241.66	1	1	2.7	0	1.00e+00	Retreg2
Intermitt. access escalation Index	92516.01	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Intermittent access day 1 total infusions	155525.68	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access day 15 total infusions	131485.34	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access terminal intake (last 3 days)	83205.14	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access total infusions	675.9	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access day 1 locomotion	104459.41	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access day 15 total locomotion	177836.92	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access total locomotion	711.59	1	1	2.7	0	1.00e+00	Retreg2
Intermittent access standard deviation	100956.84	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Cocaine induced anxiety	160280.46	1	1	2.7	0	1.00e+00	Retreg2
Post-drug Anxiety	20460.83	1	1	2.7	0	1.00e+00	Retreg2
Baseline Anxiety	103471.3	1	1	2.7	0	1.00e+00	Retreg2
Lifetime Intake	6830.03	1	1	2.7	0	1.00e+00	Retreg2
Incentive Sensitization - Responses	163579.25	1	1	2.7	0	1.00e+00	Retreg2
Incentive Sensitization - Breakpoint	142790.8	1	1	2.7	0	1.00e+00	Retreg2
Progressive ratio test 1 active lever presses	99872.69	1	1	2.7	0	1.00e+00	Retreg2
Progressive ratio test 1 breakpoint	96247.61	1	1	2.7	0	1.00e+00	Retreg2
Progressive ratio test 1 inactive lever presses	75556.75	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Progressive ratio test 2 active lever presses	57222.6	1	1	2.7	0	1.00e+00	Retreg2
Progressive ratio test 2 breakpoint	34975.96	1	1	2.7	0	1.00e+00	Retreg2
Progressive ratio test 2 inactive lever presses	164104.71	1	1	2.7	0	1.00e+00	Retreg2
Total sessions with >9 infusions	3995.08	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Short access day 1 total inactive lever presses	38149.28	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Short access day 10 total inactive lever presses	108578.43	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Short access day 1 total infusions	111479.43	1	1	2.7	0	1.00e+00	Retreg2
Short access day 10 total infusions	38157.63	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Short access total infusions	33946.03	1	1	2.7	0	1.00e+00	Retreg2
Short access day 1 locomotion	42032.93	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Short access day 10 total locomotion	90801.14	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Short access total locomotion	22766.31	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Compulsive drug intake	65439.45	1	1	2.7	0	1.00e+00	Retreg2
One hour access (0.3 mA shock)	9669.44	1	1	2.7	0	1.00e+00	Retreg2
One hour access (shock baseline)	140263.4	1	1	2.7	0	1.00e+00	Retreg2
Number of responses in last shaping day	25656.23	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Context. condit. distance diff. score	970.59	1	1	2.7	0	1.00e+00	Retreg2
Locomotion velocity, session 1	14615.25	1	1	2.7	0	1.00e+00	Retreg2
Locomotion distance, session 1	4416.18	1	1	2.7	0	1.00e+00	Retreg2
Locomotion velocity, session 2	4702.2	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Locomotion distance, session 2	2393.66	1	1	2.7	0	1.00e+00	Retreg2
Locomotion velocity, session 3	1177.39	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Locomotion distance, session 3	16615.78	1	1	2.7	0	1.00e+00	Retreg2
Stereotopy head waving bouts, day 3	1968.48	3	1	2.7	0	1.00e+00	Mst1 Prr5l Retreg2
Stereotopy head waving duration, day 3	6074.03	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Locomotion velocity, session 7	708.6	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Locomotion distance, session 7	1934.91	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Stereotopy head waving bouts, day 7	10466.92	1	1	2.7	0	1.00e+00	Retreg2
Stereotopy head waving duration, day 7	8847.36	1	1	2.7	0	1.00e+00	Retreg2
Locomotion velocity, session 8	1892.98	1	1	2.7	0	1.00e+00	Retreg2
Locomotion distance, session 8	673.32	1	1	2.7	0	1.00e+00	Retreg2
Degree of sensitization distance	7696.03	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Degree of sensitization stereotypy	8496.38	1	1	2.7	0	1.00e+00	Retreg2
Condit. Reinf. active minus inactive responses	2077.92	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Condit. Reinf. active-inactive response ratio	558.58	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Condit. Reinf. active responses	5847.95	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Condit. Reinf. inactive responses	19375.3	1	1	2.7	0	1.00e+00	Retreg2
Incentive salience index mean	4947.1	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Condit. Reinf. lever presses	7168.4	3	3	8.1	0	1.00e+00	Mst1 Prr5l Retreg2
Time in familiar zone, hab. session 1	41873.03	1	1	2.7	0	1.00e+00	Retreg2
Time in novel zone, hab. session 1	11855.76	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Total zone transitions, hab. session 1	1818.53	1	1	2.7	0	1.00e+00	Retreg2
Total locomotion distance, hab. session 1	1687	1	1	2.7	0	1.00e+00	Retreg2
Locomotion velocity, hab. session 1	1131.06	1	1	2.7	0	1.00e+00	Retreg2
Time in familiar zone, hab. session 2	11707.23	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Time in novel zone, hab. session 2	12499.19	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Total zone transitions, hab. session 2	280.53	1	1	2.7	0	1.00e+00	Retreg2
Total locomotion distance, hab. session 2	55.8	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Locomotion velocity, hab. session 2	79.6	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Novel to familiar place preference ratio	18514.75	3	1	2.7	0	1.00e+00	Mst1 Prr5l Retreg2
Novelty place preference	18140.34	3	1	2.7	0	1.00e+00	Mst1 Prr5l Retreg2
Time in novel zone, NPP test	13626.92	3	1	2.7	0	1.00e+00	Mst1 Prr5l Retreg2
Total zone transitions, NPP test	8230.03	1	1	2.7	0	1.00e+00	Retreg2
Total locomotion distance, NPP test	7114	1	1	2.7	0	1.00e+00	Retreg2
Locomotion velocity, NPP test	4041.22	1	1	2.7	0	1.00e+00	Retreg2
Pavlov. Cond. lever latency	1120.34	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. change in total contacts	2281.88	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Pavlov. Cond. index score	899.58	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. latency score	628.33	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Pavlov. Cond. lever contacts	1539.83	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. magazine entry number	1093.11	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Pavlov. Cond. intertrial magazine entries	198.69	3	3	8.1	0	1.00e+00	Mst1 Prr5l Retreg2
Pavlov. Cond. lever-magazine prob. diff.	979.4	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. response bias	880.36	3	1	2.7	0	1.00e+00	Mst1 Prr5l Retreg2
Bone: apparent density	22268.03	1	1	2.7	0	1.00e+00	Retreg2
Bone surface	8383.75	3	2	5.4	0	1.00e+00	Mst1 Prr5l Retreg2
Bone volume	33831.7	1	1	2.7	0	1.00e+00	Retreg2
Bone: connectivity density	3566.21	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Bone: cortical apparent density	45266.32	1	1	2.7	0	1.00e+00	Retreg2
Bone: cortical area	1472	8	3	8.1	0.99	5.71e-11	B3gntl1 Ccdc57 Fn3k Mst1 Rab40b Retreg2 Slc16a3 Zfp950l6
Bone: cortical porosity	932.97	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Bone: cortical porosity	2417.92	2	2	5.4	0	1.00e+00	Prr5l Retreg2
Bone: cortical thickness	73.67	15	6	16.2	-0.7	3.52e-05	Afmid Ccdc57 Cd7 Cenpx Engase Fasn Mst1 Rab40b Rbfox3 Retreg2 Slc16a3 Timp2 Usp36 Uts2r Zfp950l6
Bone: cortical thickness	6116.53	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Bone: cortical tissue density	48453.42	1	1	2.7	0	1.00e+00	Retreg2
Bone: elastic displacement	29626.25	1	1	2.7	0	1.00e+00	Retreg2
Bone: elastic work	84.3	16	3	8.1	-0.77	5.29e-05	Ccdc137 Ccdc57 Cd7 Cenpx Fasn Gps1 Lrrc45 Mcrip1 Mst1 Narf Rab40b Retreg2 Slc16a3 Slc38a10 Tepsin Uts2r
Bone: endosteal estimation	35257.61	1	1	2.7	0	1.00e+00	Retreg2
Bone: endosteal perimeter	2986.84	9	2	5.4	0.98	4.61e-11	Afmid Birc5 C1qtnf1 Dnah17 Lgals3bp LOC102548046 Pgs1 Retreg2 Tmem235
Bone: final force	483.1	9	3	8.1	1	5.05e-15	B3gntl1 Ccdc57 Fn3k Mst1 Ptchd3 Rab40b Retreg2 Slc16a3 Zfp950l6
Bone: final moment	45.39	17	3	8.1	0.98	2.30e-21	B3gntl1 Ccdc57 Cenpx Csnk1d Dcxr Fasn Fn3k Gps1 LOC134480921 Mcrip1 Mst1 Ptchd3 Rab40b Retreg2 Slc16a3 Tbcd Zfp950l6
Bone: marrow area	37067.95	1	1	2.7	0	1.00e+00	Retreg2
Bone: maximum diameter	287.21	18	2	5.4	0.94	2.05e-43	Afmid Birc5 C1qtnf1 Cyth1 Dnah17 Lgals3bp LOC100912319 LOC102548046 LOC120095218 Mst1 Pgs1 Retreg2 Syngr2 Tha1 Tk1 Tmc6 Tmem235 Tnrc6c
Bone: maximum force	1451.52	13	4	10.8	0.98	6.18e-16	B3gntl1 Ccdc57 Fasn Fn3k Gps1 LOC134480921 Mst1 Ptchd3 Rab40b Retreg2 Slc16a3 Tbcd Zfp950l6
Bone: maximum moment	629.27	18	5	13.5	0.97	3.40e-24	B3gntl1 Ccdc57 Cenpx Csnk1d Dcxr Fasn Fn3k Gps1 LOC134480921 Metrnl Mst1 Ptchd3 Rab40b Retreg2 Slc16a3 Tbcd Zfp950l11 Zfp950l6
Bone: minimum diameter	8606.13	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Bone: periosteal estimation	9560.62	4	2	5.4	1	4.31e-03	B3gntl1 Mst1 Retreg2 Zfp950l6
Bone: periosteal perimeter	1401.96	15	2	5.4	0.97	2.77e-19	Afmid Birc5 Cyth1 Dnah17 LOC120095218 Mst1 Pgs1 Rab40b Retreg2 Syngr2 Tha1 Tmc6 Tmem235 Tnrc6c Zfp950l6
Bone: post-yield work	50847.58	1	1	2.7	0	1.00e+00	Retreg2
Bone: stiffness	17808.98	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Bone: tissue strength	12264.67	1	1	2.7	0	1.00e+00	Retreg2
Bone: trabecular number	41138.39	1	1	2.7	0	1.00e+00	Retreg2
Bone: trabecular spacing	15656.57	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Bone: trabecular thickness	16647.3	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Bone: trabecular tissue density	17883.86	3	3	8.1	0	1.00e+00	Mst1 Prr5l Retreg2
Breakpoint value in progressive ratio session	112428.06	1	1	2.7	0	1.00e+00	Retreg2
Distance traveled before self-admin	134013.73	1	1	2.7	0	1.00e+00	Retreg2
Distance traveled after self-admin	100820.36	1	1	2.7	0	1.00e+00	Retreg2
Delta time in closed arm before/after self-admin	1271.86	1	1	2.7	0	1.00e+00	Retreg2
Delta time in open arm before/after self-admin	54811.83	1	1	2.7	0	1.00e+00	Retreg2
Diff in mean of infusions in LGA sessions	54252.87	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Extinction: sum of active levers before priming	45807.86	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Active lever presses in extinction session 6	1571.88	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Delta distance traveled before/after self-admin	12434.77	1	1	2.7	0	1.00e+00	Retreg2
Delta ambulatory time before/after self-admin	96034.01	1	1	2.7	0	1.00e+00	Retreg2
Time in closed arm before self-admin	44133.6	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Time in closed arm after self-admin	9759.54	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Time in open arm before self-admin	34587.99	1	1	2.7	0	1.00e+00	Retreg2
Time in open arm after self-admin	979.73	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Sum of active levers in priming session hrs 5-6	3877.89	1	1	2.7	0	1.00e+00	Retreg2
Time to tail flick, vehicle, before self-admin	25677.46	2	1	2.7	0	1.00e+00	Mst1 Retreg2
Time to tail flick, vehicle, after self-admin	118286.85	1	1	2.7	0	1.00e+00	Retreg2
Time to tail flick, test, before self-admin	32803.11	1	1	2.7	0	1.00e+00	Retreg2
Time to tail flick, test, after self-admin	5828.87	1	1	2.7	0	1.00e+00	Retreg2
Delta time to tail flick, vehicle, before/after SA	18281.67	2	2	5.4	0	1.00e+00	Mst1 Retreg2
Delta time to tail flick, test, before/after SA	56832.34	1	1	2.7	0	1.00e+00	Retreg2
Ambulatory time before self-admin	171079.71	1	1	2.7	0	1.00e+00	Retreg2
Ambulatory time after self-admin	88230.17	1	1	2.7	0	1.00e+00	Retreg2
Total heroin consumption	961.5	1	1	2.7	0	1.00e+00	Retreg2
Area under the delay curve	81605.23	1	1	2.7	0	1.00e+00	Retreg2
Delay disc. indifference point, 0s delay	9477.47	1	1	2.7	0	1.00e+00	Retreg2
Delay disc. indifference point, 16s delay	74803.61	1	1	2.7	0	1.00e+00	Retreg2
Delay disc. indifference point, 2s delay	825.84	1	1	2.7	0	1.00e+00	Retreg2
Delay disc. indifference point, 24s delay	99983.64	1	1	2.7	0	1.00e+00	Retreg2
Delay disc. indifference point, 4s delay	2525.7	1	1	2.7	0	1.00e+00	Retreg2
Delay disc. indifference point, 8s delay	101423.99	1	1	2.7	0	1.00e+00	Retreg2
Delay discount exponential model param	60214.95	1	1	2.7	0	1.00e+00	Retreg2
Delay discount hyperbolic model param	45715.54	1	1	2.7	0	1.00e+00	Retreg2
Fecal boli incidents, locomotor time 1	150160.89	1	1	2.7	0	1.00e+00	Retreg2
Change in fecal boli incidents, locomotor task	23481.3	1	1	2.7	0	1.00e+00	Retreg2
Time >=10cm from walls, locomotor time 1	49255.61	1	1	2.7	0	1.00e+00	Retreg2
Bouts of movement, locomotor time 1	41590.88	1	1	2.7	0	1.00e+00	Retreg2
Total resting periods, locomotor time 1	11802.64	1	1	2.7	0	1.00e+00	Retreg2
Rest time, locomotor task time 1	75951.88	1	1	2.7	0	1.00e+00	Retreg2
Distance moved, locomotor task time 1	159283.67	1	1	2.7	0	1.00e+00	Retreg2
Vertical activity count, locomotor time 1	219061.96	1	1	2.7	0	1.00e+00	Retreg2
Time >=10cm from walls, locomotor time 2	161986.9	1	1	2.7	0	1.00e+00	Retreg2
Bouts of movement, locomotor time 2	174298.32	1	1	2.7	0	1.00e+00	Retreg2
Total resting periods, locomotor time 2	190079.87	1	1	2.7	0	1.00e+00	Retreg2
Rest time, locomotor task time 2	83778.18	1	1	2.7	0	1.00e+00	Retreg2
Distance moved, locomotor task time 2	34268.85	1	1	2.7	0	1.00e+00	Retreg2
Vertical activity count, locomotor time 2	138414.05	1	1	2.7	0	1.00e+00	Retreg2
Weight adjusted by age	161973.18	1	1	2.7	0	1.00e+00	Retreg2
Seeking ratio, delayed vs. immediate footshock	49395.56	1	1	2.7	0	1.00e+00	Retreg2
Locomotion in novel chamber	8159.66	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Locomotion in novel chamber post-restriction	154642.04	1	1	2.7	0	1.00e+00	Retreg2
Progressive ratio	157894.89	1	1	2.7	0	1.00e+00	Retreg2
Food seeking constrained by brief footshock	444.28	8	1	2.7	-1	1.22e-19	Cysltr2 Fndc3a Itm2b Lpar6 Med4 Nudt15 Rcbtb2 Retreg2
Seeking ratio, punishment vs. effort	118281.2	1	1	2.7	0	1.00e+00	Retreg2
Run reversals in cocaine runway, females	37174.37	1	1	2.7	0	1.00e+00	Retreg2
Run reversals in cocaine runway, males	29861.56	1	1	2.7	0	1.00e+00	Retreg2
Latency to leave start box in cocaine runway	58575.8	1	1	2.7	0	1.00e+00	Retreg2
Latency to leave start box in cocaine runway, F	28379.24	1	1	2.7	0	1.00e+00	Retreg2
Latency to leave start box in cocaine runway, M	7140.1	1	1	2.7	0	1.00e+00	Retreg2
Co content in liver	2368.81	2	1	2.7	0	1.00e+00	Prr5l Retreg2
Cu content in liver	162.43	1	1	2.7	0	1.00e+00	Retreg2
Fe content in liver	5656.2	1	1	2.7	0	1.00e+00	Retreg2
K content in liver	6593.53	1	1	2.7	0	1.00e+00	Retreg2
Mg content in liver	24493.99	1	1	2.7	0	1.00e+00	Retreg2
Mn content in liver	4374.36	1	1	2.7	0	1.00e+00	Retreg2
Na content in liver	16641.94	1	1	2.7	0	1.00e+00	Retreg2
Rb content in liver	428.45	1	1	2.7	0	1.00e+00	Retreg2
Zn content in liver	15755.62	1	1	2.7	0	1.00e+00	Retreg2

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	15	0.4	2.76
Adipose	alternative TSS	16	0.4	2.64
Adipose	gene expression	42	0.4	2.69
Adipose	isoform ratio	17	0.4	2.68
Adipose	intron excision ratio	12	0.4	2.85
Adipose	mRNA stability	21	0.5	2.72
BLA	alternative polyA	5	0.2	2.84
BLA	alternative TSS	6	0.3	2.72
BLA	gene expression	22	0.3	2.69
BLA	isoform ratio	15	0.5	2.75
BLA	intron excision ratio	5	0.2	2.82
BLA	mRNA stability	10	0.4	2.76
Brain	alternative polyA	9	0.2	2.63
Brain	alternative TSS	13	0.3	2.82
Brain	gene expression	24	0.2	2.7
Brain	isoform ratio	19	0.3	2.74
Brain	intron excision ratio	21	0.3	2.95
Brain	mRNA stability	17	0.3	2.72
Eye	alternative polyA	0	0	2.87
Eye	alternative TSS	0	0	2.77
Eye	gene expression	2	0.2	2.88
Eye	isoform ratio	1	0.2	2.77
Eye	intron excision ratio	4	0.4	2.39
Eye	mRNA stability	1	0.3	3.01
IC	alternative polyA	6	0.3	2.82
IC	alternative TSS	7	0.4	2.94
IC	gene expression	19	0.3	2.79
IC	isoform ratio	8	0.3	2.86
IC	intron excision ratio	11	0.3	3.02
IC	mRNA stability	6	0.4	2.71
IL	alternative polyA	6	0.5	2.91
IL	alternative TSS	2	0.3	2.85
IL	gene expression	11	0.3	2.73
IL	isoform ratio	3	0.2	2.89
IL	intron excision ratio	2	0.2	2.98
IL	mRNA stability	5	0.4	2.75
LHb	alternative polyA	3	0.3	2.8
LHb	alternative TSS	1	0.1	2.38
LHb	gene expression	11	0.3	2.81
LHb	isoform ratio	1	0.1	2.85
LHb	intron excision ratio	5	0.4	2.74
LHb	mRNA stability	3	0.2	2.67
Liver	alternative polyA	16	0.6	2.91
Liver	alternative TSS	20	0.7	2.69
Liver	gene expression	32	0.4	2.74
Liver	isoform ratio	28	0.8	2.89
Liver	intron excision ratio	28	0.6	2.78
Liver	mRNA stability	19	0.6	2.88
NAcc	alternative polyA	8	0.2	5.36
NAcc	alternative TSS	9	0.2	2.84
NAcc	gene expression	33	0.3	2.74
NAcc	isoform ratio	24	0.5	2.89
NAcc	intron excision ratio	21	0.3	2.88
NAcc	mRNA stability	12	0.3	2.75
OFC	alternative polyA	0	0	2.86
OFC	alternative TSS	1	0.1	2.91
OFC	gene expression	12	0.3	2.69
OFC	isoform ratio	1	0.1	2.63
OFC	intron excision ratio	0	0	2.94
OFC	mRNA stability	6	0.5	2.81
PL	alternative polyA	13	0.4	2.87
PL	alternative TSS	5	0.1	2.84
PL	gene expression	29	0.3	2.77
PL	isoform ratio	15	0.3	2.78
PL	intron excision ratio	15	0.3	2.96
PL	mRNA stability	17	0.4	2.71
pVTA	alternative polyA	6	0.2	2.75
pVTA	alternative TSS	9	0.4	2.88
pVTA	gene expression	26	0.3	2.79
pVTA	isoform ratio	8	0.2	2.74
pVTA	intron excision ratio	9	0.2	2.87
pVTA	mRNA stability	8	0.3	2.74
RMTg	alternative polyA	0	0	2.7
RMTg	alternative TSS	1	0.2	3.19
RMTg	gene expression	5	0.2	2.68
RMTg	isoform ratio	0	0	2.83
RMTg	intron excision ratio	2	0.2	2.96
RMTg	mRNA stability	1	0.2	2.66