Hub : Traits

Conditioned reinforcement - inactives

Tags: Behavior · Conditioned reinforcement

Project: p50_paul_meyer_2020

6 loci · 6 genes with independent associations · 7 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes
1	chr3	166876190	168274701	1	1	1.73e-07	2.07e-05	2.01e-01	Adig
2	chr5	118282290	119677504	1	1	1.48e-07	2.81e-01	1.00e+00	Atg4c
3	chr7	92127461	93066096	1	1	6.79e-16	2.51e-01	1.00e+00	Ndufb9
4	chr8	117463629	118343328	1	1	3.39e-34	2.59e-03	1.00e+00	Mst1
5	chr9	83390749	84777604	2	1	0.00e+00	3.62e-01	1.00e+00	Retreg2
6	chr17	61510864	62906219	1	1	1.14e-12	4.04e-02	5.30e-01	Ccny

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes
BMI with tail	1925.3	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
BMI without tail	36014.74	3	3	50	1	1.61e-04	Ccny Ndufb9 Retreg2
Body weight	8.23	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Epididymis fat weight	21707.58	4	3	50	1	5.64e-05	Ccny Mst1 Ndufb9 Retreg2
Glucose	622.62	4	2	33.3	-0.96	3.86e-02	Atg4c Mst1 Ndufb9 Retreg2
Heart weight	4511.78	3	2	33.3	0	1.00e+00	Ccny Ndufb9 Retreg2
Left kidney weight	35320.16	3	2	33.3	-1	1.39e-04	Ccny Ndufb9 Retreg2
Right kidney weight	23377.96	4	4	66.7	-1	3.97e-05	Ccny Mst1 Ndufb9 Retreg2
Tail length	23038.49	3	2	33.3	1	4.91e-04	Ccny Mst1 Retreg2
Length with tail	1540.27	3	3	50	1	8.27e-04	Mst1 Ndufb9 Retreg2
Length without tail	25871.02	4	3	50	-1	3.40e-05	Ccny Mst1 Ndufb9 Retreg2
Liver weight, left	3639.22	4	3	50	-1	3.36e-03	Ccny Mst1 Ndufb9 Retreg2
Liver weight, right	75	4	2	33.3	-0.88	1.22e-01	Ccny Mst1 Ndufb9 Retreg2
Parametrial fat weight	311.74	2	1	16.7	0	1.00e+00	Ccny Retreg2
Retroperitoneal fat weight	4023.77	3	3	50	1	1.65e-03	Atg4c Mst1 Retreg2
Intraocular pressure	20040.92	1	1	16.7	0	1.00e+00	Retreg2
Extensor digitorum longus weight	2342.82	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Soleus weight	40.94	3	1	16.7	0	1.00e+00	Ccny Ndufb9 Retreg2
Tibialis anterior weight	4881.94	1	1	16.7	0	1.00e+00	Retreg2
Tibia length	1094.3	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Number of licking bursts	52378.83	2	1	16.7	0	1.00e+00	Ccny Retreg2
Food consumed during 24 hour testing period	26556	3	1	16.7	-1	4.81e-05	Ccny Mst1 Retreg2
Times rat made contact with spout	158.46	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Mean time between licks in bursts	49879.82	3	1	16.7	1	1.59e-04	Ccny Ndufb9 Retreg2
Mean num. licks in bursts	47539.71	2	1	16.7	0	1.00e+00	Ccny Retreg2
Std. dev. time between licks in bursts	31350.49	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Water consumed over 24 hours	34477.35	2	1	16.7	0	1.00e+00	Ccny Retreg2
Patch foraging indifference point 0 sec	38337.12	3	1	16.7	0	1.00e+00	Atg4c Mst1 Retreg2
Patch foraging indifference point AUC	26652.18	4	3	50	-1	2.10e-05	Ccny Mst1 Ndufb9 Retreg2
Indifference point function ln k	28439.09	4	4	66.7	1	2.07e-05	Ccny Mst1 Ndufb9 Retreg2
Indifference point function log k	28439.09	4	4	66.7	1	2.07e-05	Ccny Mst1 Ndufb9 Retreg2
Patch foraging total patch changes 0 sec	30068.49	3	1	16.7	1	1.77e-04	Atg4c Mst1 Retreg2
Patch foraging total patch changes 12 sec	2223	5	4	66.7	1	2.23e-04	Atg4c Ccny Mst1 Ndufb9 Retreg2
Patch foraging total patch changes 18 sec	19633.85	5	1	16.7	1	3.13e-07	Atg4c Ccny Mst1 Ndufb9 Retreg2
Patch foraging total patch changes 24 sec	33437.22	4	4	66.7	1	1.86e-05	Ccny Mst1 Ndufb9 Retreg2
Patch foraging total patch changes 6 sec	8182.17	4	3	50	1	7.95e-04	Atg4c Ccny Ndufb9 Retreg2
Patch foraging time to switch 0 sec	39161.76	3	2	33.3	1	4.32e-04	Mst1 Ndufb9 Retreg2
Patch foraging water rate 0 sec	49608.69	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Patch foraging water rate 12 sec	40481.31	3	2	33.3	-1	7.43e-05	Ccny Mst1 Retreg2
Patch foraging water rate 18 sec	20660	4	1	16.7	-1	1.18e-05	Ccny Mst1 Ndufb9 Retreg2
Patch foraging water rate 24 sec	1575.07	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Patch foraging water rate 6 sec	1363.06	3	3	50	0	1.00e+00	Ccny Ndufb9 Retreg2
Locomotor activity	29.73	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Locomotor testing distance	17920.45	4	3	50	-1	2.30e-05	Ccny Mst1 Ndufb9 Retreg2
Locomotor testing rearing	38114.58	3	2	33.3	-1	2.17e-04	Mst1 Ndufb9 Retreg2
Light reinforcement 1	38840.3	3	2	33.3	-1	8.44e-04	Atg4c Ccny Retreg2
Light reinforcement 2	21617.95	4	3	50	-1	1.27e-04	Ccny Mst1 Ndufb9 Retreg2
Reaction time number correct	38379.7	3	3	50	-1	2.49e-04	Ccny Ndufb9 Retreg2
Reaction time mean minus median	41167.02	4	1	16.7	1	7.54e-06	Ccny Mst1 Ndufb9 Retreg2
Reaction time mean minus median AUC	52107.27	3	3	50	1	3.20e-04	Mst1 Ndufb9 Retreg2
Reaction time num false alarms	19041.41	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Reaction time num false alarms AUC	26636.31	3	2	33.3	-1	1.02e-03	Ccny Mst1 Retreg2
Reaction time trials correct on left	38379.7	3	3	50	-1	2.49e-04	Ccny Ndufb9 Retreg2
Reaction time trials on left	37513.48	3	3	50	-1	2.81e-04	Ccny Ndufb9 Retreg2
Reaction time mean	23601.36	3	1	16.7	1	1.49e-04	Atg4c Ccny Retreg2
Reaction time mean AUC	28341.95	3	1	16.7	1	1.11e-04	Atg4c Ccny Retreg2
Median of all reaction times	10477.75	2	1	16.7	0	1.00e+00	Atg4c Retreg2
Reaction time omissions	11426.44	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Reaction time false alarm rate	302.63	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Reaction time premature initiation rate	18442.81	2	1	16.7	0	1.00e+00	Ccny Retreg2
Reaction time premature initiations	46245.52	2	1	16.7	0	1.00e+00	Ccny Retreg2
Std. dev. reaction times	37378.33	3	1	16.7	1	2.92e-04	Mst1 Ndufb9 Retreg2
Reaction time trials completed	37513.48	3	3	50	-1	2.81e-04	Ccny Ndufb9 Retreg2
Reaction time trials AUC	37939.65	3	2	33.3	-1	2.86e-04	Ccny Ndufb9 Retreg2
Social response proportion	11777.32	3	1	16.7	0	1.00e+00	Atg4c Mst1 Retreg2
Social responses	1433	4	2	33.3	-1	9.24e-04	Ccny Mst1 Ndufb9 Retreg2
Social time	14749.63	3	1	16.7	0	1.00e+00	Ccny Mst1 Retreg2
Conditioned locomotion	3044.63	2	1	16.7	0	1.00e+00	Ccny Retreg2
Cocaine response after cond. corrected	16463.61	3	1	16.7	1	2.39e-04	Atg4c Ccny Retreg2
Cocaine response after cond. not corrected	16069.67	3	1	16.7	1	2.47e-04	Atg4c Ccny Retreg2
Cocaine response before conditioning	1409.02	2	1	16.7	0	1.00e+00	Ccny Retreg2
Saline control response	4350.34	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. active minus inactive responses	26712.34	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. active-inactive response ratio	45793.79	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Condit. Reinf. active responses	4856.3	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Condit. Reinf. inactive responses	14046.99	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Condit. Reinf. lever presses	5308.92	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Condit. Reinf. lever reinforcers received	1007.39	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. lever latency	5465.68	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. magazine entry latency	16518.76	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Pavlov. Cond. change in total contacts	38264.3	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Pavlov. Cond. index score	16014.27	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Pavlov. Cond. latency score	19509.23	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Pavlov. Cond. lever contacts	11053	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. magazine entry number	5638.23	3	2	33.3	0	1.00e+00	Atg4c Mst1 Retreg2
Pavlov. Cond. intertrial magazine entries	35003.89	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. lever-magazine prob. diff.	14975.97	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Pavlov. Cond. response bias	2629.8	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Conditioned reinforcement - actives	47885.1	3	3	50	1	7.09e-06	Ccny Ndufb9 Retreg2
Conditioned locomotion	10384.72	4	3	50	1	1.08e-04	Ccny Mst1 Ndufb9 Retreg2
Intermittent access intake day 1-15 change	42126.53	4	2	33.3	1	8.33e-06	Atg4c Ccny Mst1 Retreg2
Intermittent access intake escalation	52390.51	3	1	16.7	1	5.41e-05	Atg4c Mst1 Retreg2
Intermittent access intake escalation 2	36035.56	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Intermitt. access day 1 inactive lever presses	39430.13	5	2	33.3	1	7.19e-08	Adig Ccny Mst1 Ndufb9 Retreg2
Intermitt. access day 15 inactive lever presses	69437.6	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Intermitt. access escalation Index	37011.11	4	2	33.3	-1	5.42e-06	Ccny Mst1 Ndufb9 Retreg2
Intermittent access day 1 total infusions	31111.23	4	1	16.7	-1	8.78e-06	Atg4c Ccny Mst1 Retreg2
Intermittent access day 15 total infusions	43834.25	2	1	16.7	0	1.00e+00	Ccny Retreg2
Intermittent access terminal intake (last 3 days)	41604.86	2	1	16.7	0	1.00e+00	Ccny Retreg2
Intermittent access total infusions	345.81	2	1	16.7	0	1.00e+00	Ccny Retreg2
Intermittent access day 1 locomotion	34835.54	2	2	33.3	0	1.00e+00	Ccny Retreg2
Intermittent access day 15 total locomotion	44477.15	3	2	33.3	1	5.98e-04	Atg4c Ccny Retreg2
Intermittent access total locomotion	243.62	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Intermittent access standard deviation	50495.28	3	3	50	1	4.29e-05	Ccny Mst1 Retreg2
Cocaine induced anxiety	40090.29	3	3	50	-1	2.51e-04	Ccny Ndufb9 Retreg2
Post-drug Anxiety	6831.14	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Baseline Anxiety	25921.06	3	3	50	1	1.25e-03	Ccny Ndufb9 Retreg2
Lifetime Intake	3437.35	2	2	33.3	0	1.00e+00	Ccny Retreg2
Incentive Sensitization - Responses	32729.3	4	4	66.7	-1	5.84e-06	Atg4c Ccny Ndufb9 Retreg2
Incentive Sensitization - Breakpoint	28571.69	4	4	66.7	-1	5.12e-06	Atg4c Ccny Ndufb9 Retreg2
Progressive ratio test 1 active lever presses	24987.93	3	2	33.3	1	1.04e-04	Ccny Ndufb9 Retreg2
Progressive ratio test 1 breakpoint	24081.17	3	2	33.3	1	8.36e-05	Ccny Ndufb9 Retreg2
Progressive ratio test 1 inactive lever presses	21595.19	6	4	66.7	1	5.44e-11	Adig Atg4c Ccny Mst1 Ndufb9 Retreg2
Progressive ratio test 2 active lever presses	11457.74	4	2	33.3	-1	1.64e-05	Atg4c Ccny Ndufb9 Retreg2
Progressive ratio test 2 breakpoint	8764.12	3	2	33.3	-1	9.89e-04	Atg4c Ccny Retreg2
Progressive ratio test 2 inactive lever presses	32828.24	4	2	33.3	1	7.69e-06	Ccny Mst1 Ndufb9 Retreg2
Total sessions with >9 infusions	1619.35	5	3	50	-0.99	2.15e-03	Adig Atg4c Ccny Mst1 Retreg2
Short access day 1 total inactive lever presses	19081.06	5	4	66.7	-1	3.01e-06	Adig Ccny Mst1 Ndufb9 Retreg2
Short access day 10 total inactive lever presses	54320.96	3	3	50	1	4.55e-05	Ccny Mst1 Retreg2
Short access day 1 total infusions	22349.97	4	2	33.3	-1	1.34e-04	Adig Ccny Mst1 Retreg2
Short access day 10 total infusions	10907.85	6	3	50	-1	2.37e-07	Adig Atg4c Ccny Mst1 Ndufb9 Retreg2
Short access total infusions	11353.34	3	2	33.3	0	1.00e+00	Adig Ccny Retreg2
Short access day 1 locomotion	21036.9	3	3	50	1	6.43e-05	Ccny Ndufb9 Retreg2
Short access day 10 total locomotion	45407.68	3	2	33.3	1	1.06e-04	Ccny Mst1 Retreg2
Short access total locomotion	17075.38	3	2	33.3	1	4.41e-06	Mst1 Ndufb9 Retreg2
Compulsive drug intake	13094.66	4	1	16.7	-1	2.37e-07	Ccny Mst1 Ndufb9 Retreg2
One hour access (0.3 mA shock)	3241.22	3	2	33.3	0	1.00e+00	Ccny Ndufb9 Retreg2
One hour access (shock baseline)	46761.01	2	1	16.7	0	1.00e+00	Ccny Retreg2
Number of responses in last shaping day	17140.86	2	2	33.3	0	1.00e+00	Ccny Retreg2
Context. condit. distance diff. score	970.59	1	1	16.7	0	1.00e+00	Retreg2
Locomotion velocity, session 1	7315.11	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Locomotion distance, session 1	2213.01	2	1	16.7	0	1.00e+00	Ccny Retreg2
Locomotion velocity, session 2	3137.81	3	2	33.3	0	1.00e+00	Atg4c Mst1 Retreg2
Locomotion distance, session 2	806.64	3	1	16.7	0	1.00e+00	Ccny Mst1 Retreg2
Locomotion velocity, session 3	2332.53	1	1	16.7	0	1.00e+00	Retreg2
Locomotion distance, session 3	16615.78	1	1	16.7	0	1.00e+00	Retreg2
Stereotopy head waving bouts, day 3	2943.11	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Stereotopy head waving duration, day 3	6074.03	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Locomotion velocity, session 7	708.6	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Locomotion distance, session 7	1294.52	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Stereotopy head waving bouts, day 7	5257.18	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Stereotopy head waving duration, day 7	4446.48	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Locomotion velocity, session 8	950.4	2	1	16.7	0	1.00e+00	Ccny Retreg2
Locomotion distance, session 8	673.32	1	1	16.7	0	1.00e+00	Retreg2
Degree of sensitization distance	7696.03	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Degree of sensitization stereotypy	2841.03	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Condit. Reinf. active minus inactive responses	1382.49	3	1	16.7	0	1.00e+00	Atg4c Ccny Retreg2
Condit. Reinf. active-inactive response ratio	555.67	2	1	16.7	0	1.00e+00	Atg4c Retreg2
Condit. Reinf. active responses	3898.02	3	1	16.7	0	1.00e+00	Atg4c Ccny Retreg2
Condit. Reinf. inactive responses	6466.37	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Incentive salience index mean	3705.62	4	1	16.7	1	2.65e-04	Atg4c Ccny Mst1 Retreg2
Condit. Reinf. lever presses	10735.09	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Time in familiar zone, hab. session 1	13965.11	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Time in novel zone, hab. session 1	8889.29	3	1	16.7	-1	6.19e-06	Atg4c Mst1 Retreg2
Total zone transitions, hab. session 1	916.07	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Total locomotion distance, hab. session 1	849.35	2	1	16.7	0	1.00e+00	Ccny Retreg2
Locomotion velocity, hab. session 1	571.33	2	1	16.7	0	1.00e+00	Ccny Retreg2
Time in familiar zone, hab. session 2	7807.02	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Time in novel zone, hab. session 2	6253.41	3	2	33.3	-1	3.06e-04	Atg4c Mst1 Retreg2
Total zone transitions, hab. session 2	99.53	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Total locomotion distance, hab. session 2	51.92	2	1	16.7	0	1.00e+00	Ccny Retreg2
Locomotion velocity, hab. session 2	77.91	2	1	16.7	0	1.00e+00	Ccny Retreg2
Novel to familiar place preference ratio	11109.91	4	1	16.7	1	1.91e-05	Atg4c Ccny Mst1 Retreg2
Novelty place preference	13605.44	4	1	16.7	1	6.61e-04	Atg4c Ccny Mst1 Retreg2
Time in novel zone, NPP test	13624.5	3	1	16.7	0	1.00e+00	Atg4c Mst1 Retreg2
Total zone transitions, NPP test	4127.68	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Total locomotion distance, NPP test	3566.83	2	2	33.3	0	1.00e+00	Ccny Retreg2
Locomotion velocity, NPP test	2031.76	2	2	33.3	0	1.00e+00	Ccny Retreg2
Pavlov. Cond. lever latency	749.58	3	2	33.3	0	1.00e+00	Atg4c Mst1 Retreg2
Pavlov. Cond. magazine entry latency	8.04	1	0	0	0	1.00e+00	Ccny
Pavlov. Cond. change in total contacts	2273.55	2	1	16.7	0	1.00e+00	Ccny Retreg2
Pavlov. Cond. index score	601.98	3	2	33.3	0	1.00e+00	Atg4c Mst1 Retreg2
Pavlov. Cond. latency score	935.96	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Pavlov. Cond. lever contacts	775.26	4	2	33.3	-0.98	1.75e-02	Atg4c Mst1 Ndufb9 Retreg2
Pavlov. Cond. magazine entry number	726.35	3	1	16.7	0	1.00e+00	Ccny Mst1 Retreg2
Pavlov. Cond. intertrial magazine entries	190.08	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Pavlov. Cond. lever-magazine prob. diff.	654.9	3	1	16.7	0	1.00e+00	Atg4c Mst1 Retreg2
Pavlov. Cond. response bias	876.8	3	1	16.7	0	1.00e+00	Atg4c Mst1 Retreg2
Bone: apparent density	11138.75	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Bone surface	12570.47	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone volume	16919.6	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Bone: connectivity density	2373.11	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: cortical apparent density	15092.86	3	1	16.7	0	1.00e+00	Ccny Ndufb9 Retreg2
Bone: cortical area	6332.51	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: cortical porosity	618.67	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: cortical porosity	2407.81	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Bone: cortical thickness	566.34	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: cortical thickness	4081.28	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: cortical tissue density	16155.62	3	1	16.7	0	1.00e+00	Ccny Ndufb9 Retreg2
Bone: elastic displacement	14817.48	1	1	16.7	0	1.00e+00	Retreg2
Bone: elastic work	757.88	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: endosteal estimation	11756.25	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: endosteal perimeter	14902.52	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Bone: final force	3544.85	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: final moment	548.75	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: marrow area	12360.31	3	1	16.7	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: maximum diameter	8150.69	3	2	33.3	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: maximum force	17305.93	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: maximum moment	12386.14	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: minimum diameter	8606.13	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: periosteal estimation	19111.51	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: periosteal perimeter	21606.9	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: post-yield work	25428.45	2	1	16.7	0	1.00e+00	Mst1 Retreg2
Bone: stiffness	17808.98	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: tissue strength	12264.67	1	1	16.7	0	1.00e+00	Retreg2
Bone: trabecular number	20584.56	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Bone: trabecular spacing	10445.17	3	3	50	0	1.00e+00	Mst1 Ndufb9 Retreg2
Bone: trabecular thickness	16647.3	2	2	33.3	0	1.00e+00	Mst1 Retreg2
Bone: trabecular tissue density	13418.39	4	4	66.7	1	5.83e-04	Ccny Mst1 Ndufb9 Retreg2
Breakpoint value in progressive ratio session	28115.02	3	1	16.7	1	4.41e-05	Ccny Mst1 Retreg2
Distance traveled before self-admin	26823.23	4	3	50	1	1.04e-05	Atg4c Ccny Ndufb9 Retreg2
Distance traveled after self-admin	33660.24	3	3	50	0	1.00e+00	Atg4c Ccny Retreg2
Delta time in closed arm before/after self-admin	522.76	4	2	33.3	0.84	1.60e-01	Atg4c Ccny Ndufb9 Retreg2
Delta time in open arm before/after self-admin	13728.65	3	2	33.3	1	4.87e-04	Atg4c Ccny Retreg2
Diff in mean of infusions in LGA sessions	21708.45	4	2	33.3	-1	3.92e-06	Atg4c Mst1 Ndufb9 Retreg2
Extinction: sum of active levers before priming	18365.57	4	4	66.7	1	5.40e-05	Ccny Mst1 Ndufb9 Retreg2
Active lever presses in extinction session 6	1124.21	3	2	33.3	0	1.00e+00	Ccny Mst1 Retreg2
Delta distance traveled before/after self-admin	3156.2	3	3	50	-0.99	7.98e-03	Ccny Ndufb9 Retreg2
Delta ambulatory time before/after self-admin	19227.54	4	2	33.3	-1	3.43e-05	Atg4c Ccny Ndufb9 Retreg2
Time in closed arm before self-admin	17665.37	4	3	50	-1	3.18e-05	Atg4c Ccny Mst1 Retreg2
Time in closed arm after self-admin	6616.57	3	3	50	0	1.00e+00	Ccny Mst1 Retreg2
Time in open arm before self-admin	5805.31	5	3	50	-1	2.86e-05	Atg4c Ccny Mst1 Ndufb9 Retreg2
Time in open arm after self-admin	518.44	4	4	66.7	0.95	4.94e-02	Ccny Mst1 Ndufb9 Retreg2
Sum of active levers in priming session hrs 5-6	1945.79	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Time to tail flick, vehicle, before self-admin	10379.27	4	2	33.3	1	4.16e-04	Ccny Mst1 Ndufb9 Retreg2
Time to tail flick, vehicle, after self-admin	29588.56	3	2	33.3	1	2.72e-04	Ccny Ndufb9 Retreg2
Time to tail flick, test, before self-admin	8218.7	4	2	33.3	-1	2.12e-03	Atg4c Ccny Ndufb9 Retreg2
Time to tail flick, test, after self-admin	2022.59	3	3	50	0	1.00e+00	Ccny Ndufb9 Retreg2
Delta time to tail flick, vehicle, before/after SA	9235.71	3	3	50	1	3.54e-03	Ccny Mst1 Retreg2
Delta time to tail flick, test, before/after SA	14216.41	4	1	16.7	1	1.11e-03	Ccny Mst1 Ndufb9 Retreg2
Ambulatory time before self-admin	42793.01	3	3	50	1	4.17e-04	Atg4c Ccny Retreg2
Ambulatory time after self-admin	22091.14	4	3	50	1	1.48e-03	Atg4c Ccny Mst1 Retreg2
Total heroin consumption	279.5	4	2	33.3	0.93	6.88e-02	Adig Atg4c Ccny Retreg2
Area under the delay curve	20413.22	3	2	33.3	-1	2.50e-04	Atg4c Ccny Retreg2
Delay disc. indifference point, 0s delay	9477.47	1	1	16.7	0	1.00e+00	Retreg2
Delay disc. indifference point, 16s delay	18726.93	3	3	50	-1	2.51e-04	Atg4c Ccny Retreg2
Delay disc. indifference point, 2s delay	282.83	3	1	16.7	0	1.00e+00	Atg4c Ccny Retreg2
Delay disc. indifference point, 24s delay	25014.94	3	2	33.3	-1	6.43e-05	Atg4c Ccny Retreg2
Delay disc. indifference point, 4s delay	661.39	4	3	50	-0.97	2.87e-02	Atg4c Ccny Ndufb9 Retreg2
Delay disc. indifference point, 8s delay	33815.67	2	1	16.7	0	1.00e+00	Atg4c Retreg2
Delay discount exponential model param	20083.03	2	2	33.3	0	1.00e+00	Atg4c Retreg2
Delay discount hyperbolic model param	15250.3	2	2	33.3	0	1.00e+00	Atg4c Retreg2
Fecal boli incidents, locomotor time 1	37546.11	3	1	16.7	-1	1.88e-04	Atg4c Ccny Retreg2
Change in fecal boli incidents, locomotor task	7889.79	3	3	50	0	1.00e+00	Ccny Ndufb9 Retreg2
Time >=10cm from walls, locomotor time 1	9866.97	4	2	33.3	-1	9.07e-06	Atg4c Ccny Ndufb9 Retreg2
Bouts of movement, locomotor time 1	20842.46	2	2	33.3	0	1.00e+00	Ccny Retreg2
Total resting periods, locomotor time 1	5936.78	2	2	33.3	0	1.00e+00	Ccny Retreg2
Rest time, locomotor task time 1	18996.61	3	1	16.7	1	3.13e-04	Ccny Ndufb9 Retreg2
Distance moved, locomotor task time 1	39837.96	3	3	50	-1	2.53e-04	Ccny Ndufb9 Retreg2
Vertical activity count, locomotor time 1	109540.42	1	1	16.7	0	1.00e+00	Retreg2
Time >=10cm from walls, locomotor time 2	53999.89	2	1	16.7	0	1.00e+00	Ccny Retreg2
Bouts of movement, locomotor time 2	58114.39	2	2	33.3	0	1.00e+00	Ccny Retreg2
Total resting periods, locomotor time 2	63372.9	2	2	33.3	0	1.00e+00	Ccny Retreg2
Rest time, locomotor task time 2	16764.22	4	2	33.3	-1	1.20e-05	Atg4c Ccny Ndufb9 Retreg2
Distance moved, locomotor task time 2	11481.53	3	2	33.3	0	1.00e+00	Atg4c Ccny Retreg2
Vertical activity count, locomotor time 2	34622.46	3	2	33.3	-1	5.15e-04	Atg4c Ccny Retreg2
Weight adjusted by age	40522.05	3	3	50	1	5.40e-04	Ccny Ndufb9 Retreg2
Seeking ratio, delayed vs. immediate footshock	24709.08	2	2	33.3	0	1.00e+00	Ccny Retreg2
Locomotion in novel chamber	5467.09	3	3	50	0	1.00e+00	Ccny Ndufb9 Retreg2
Locomotion in novel chamber post-restriction	38665.63	3	1	16.7	-1	1.34e-04	Ccny Ndufb9 Retreg2
Progressive ratio	39495.34	3	3	50	-1	4.39e-04	Ccny Ndufb9 Retreg2
Food seeking constrained by brief footshock	2451.95	3	1	16.7	0	1.00e+00	Atg4c Ndufb9 Retreg2
Seeking ratio, punishment vs. effort	29579.13	3	3	50	1	2.74e-04	Ccny Ndufb9 Retreg2
Run reversals in cocaine runway, females	18598.36	2	1	16.7	0	1.00e+00	Ccny Retreg2
Run reversals in cocaine runway, males	7496.92	3	2	33.3	1	8.96e-04	Ccny Ndufb9 Retreg2
Latency to leave start box in cocaine runway	29317.55	2	2	33.3	0	1.00e+00	Ccny Retreg2
Latency to leave start box in cocaine runway, F	14201.52	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Latency to leave start box in cocaine runway, M	2456.15	3	2	33.3	0	1.00e+00	Ccny Ndufb9 Retreg2
Co content in liver	4721.74	1	1	16.7	0	1.00e+00	Retreg2
Cu content in liver	89.33	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Fe content in liver	5656.2	1	1	16.7	0	1.00e+00	Retreg2
K content in liver	6593.53	1	1	16.7	0	1.00e+00	Retreg2
Mg content in liver	24493.99	1	1	16.7	0	1.00e+00	Retreg2
Mn content in liver	2219.37	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Na content in liver	8325.4	2	1	16.7	0	1.00e+00	Ndufb9 Retreg2
Rb content in liver	241.33	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2
Se content in liver	8.64	1	0	0	0	1.00e+00	Ndufb9
Zn content in liver	7891.81	2	2	33.3	0	1.00e+00	Ndufb9 Retreg2

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1.08
Adipose	alternative TSS	0	0	1.1
Adipose	gene expression	1	0	1.08
Adipose	isoform ratio	0	0	1.06
Adipose	intron excision ratio	0	0	1.02
Adipose	mRNA stability	1	0	1.08
BLA	alternative polyA	0	0	1.14
BLA	alternative TSS	0	0	1.01
BLA	gene expression	0	0	1.07
BLA	isoform ratio	0	0	1.14
BLA	intron excision ratio	0	0	1.06
BLA	mRNA stability	0	0	1.11
Brain	alternative polyA	0	0	1.18
Brain	alternative TSS	0	0	1.04
Brain	gene expression	0	0	1.1
Brain	isoform ratio	0	0	1.12
Brain	intron excision ratio	0	0	1.06
Brain	mRNA stability	0	0	1.11
Eye	alternative polyA	0	0	1.36
Eye	alternative TSS	0	0	0.91
Eye	gene expression	0	0	1.1
Eye	isoform ratio	0	0	1.39
Eye	intron excision ratio	0	0	0.98
Eye	mRNA stability	0	0	1.09
IC	alternative polyA	0	0	1.22
IC	alternative TSS	0	0	1.04
IC	gene expression	0	0	1.11
IC	isoform ratio	0	0	1.1
IC	intron excision ratio	1	0	1.07
IC	mRNA stability	0	0	1.1
IL	alternative polyA	0	0	1.29
IL	alternative TSS	0	0	0.91
IL	gene expression	0	0	1.04
IL	isoform ratio	0	0	1.1
IL	intron excision ratio	0	0	0.97
IL	mRNA stability	0	0	1.11
LHb	alternative polyA	0	0	1.28
LHb	alternative TSS	0	0	1.04
LHb	gene expression	0	0	1.08
LHb	isoform ratio	0	0	1.14
LHb	intron excision ratio	0	0	0.91
LHb	mRNA stability	0	0	1.09
Liver	alternative polyA	0	0	1.12
Liver	alternative TSS	0	0	1.16
Liver	gene expression	0	0	1.09
Liver	isoform ratio	1	0	1.18
Liver	intron excision ratio	0	0	1.04
Liver	mRNA stability	0	0	1.14
NAcc	alternative polyA	2	0.1	119.74
NAcc	alternative TSS	0	0	1.08
NAcc	gene expression	0	0	1.09
NAcc	isoform ratio	0	0	1.11
NAcc	intron excision ratio	0	0	1.09
NAcc	mRNA stability	0	0	1.12
OFC	alternative polyA	0	0	1.28
OFC	alternative TSS	0	0	1.04
OFC	gene expression	0	0	1.06
OFC	isoform ratio	0	0	1.12
OFC	intron excision ratio	0	0	1.07
OFC	mRNA stability	0	0	1.03
PL	alternative polyA	0	0	1.21
PL	alternative TSS	0	0	1.13
PL	gene expression	0	0	1.1
PL	isoform ratio	0	0	1.09
PL	intron excision ratio	0	0	1.09
PL	mRNA stability	0	0	1.12
pVTA	alternative polyA	0	0	1.3
pVTA	alternative TSS	0	0	1.1
pVTA	gene expression	1	0	1.12
pVTA	isoform ratio	0	0	1.19
pVTA	intron excision ratio	0	0	1.06
pVTA	mRNA stability	0	0	1.13
RMTg	alternative polyA	0	0	1.06
RMTg	alternative TSS	0	0	1.07
RMTg	gene expression	0	0	1.08
RMTg	isoform ratio	0	0	1.15
RMTg	intron excision ratio	0	0	0.94
RMTg	mRNA stability	0	0	1.11