Zfp551

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Brain gene expression Zfp551 0.3 0.18 1.1e-03 0.03 0.04 0.03 0.02 6.2e-04 2.1e-04 1.8e-03 2.8e-03
2 PL gene expression Zfp551 0.07 0.06 1.9e-03 0.02 0.02 0.02 0.02 9.9e-04 1.0e-03 4.4e-03 2.0e-03
3 pVTA gene expression Zfp551 0.29 0.17 3.6e-04 0.07 0.07 0.05 0.06 3.8e-04 4.8e-04 3.0e-03 8.8e-04

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
Bone: apparent density0.10.20.3-0.60.40.2
Area under the delay curve0.50.61.0-1.0-0.70.5
BMI with tail0.31.13.3-0.0-1.80.1
BMI without tail0.30.61.5-1.2-0.30.3
Body weight0.62.65.11.50.6-2.3
Weight adjusted by age0.70.82.0-0.81.4-0.0
Bone surface1.42.46.00.42.4-1.1
Bone volume1.11.84.30.52.1-1.0
Breakpoint value in progressive ratio session0.91.01.3-1.0-1.10.9
Number of licking bursts0.00.00.10.30.10.1
Context. condit. distance diff. score0.50.61.1-1.1-0.20.7
Locomotion velocity, session 13.74.06.9-2.10.92.6
Locomotion distance, session 12.43.15.8-1.52.41.1
Locomotion velocity, session 21.21.42.6-1.10.51.6
Locomotion distance, session 21.01.43.8-0.52.00.5
Locomotion velocity, session 30.10.10.4-0.2-0.00.6
Locomotion distance, session 30.80.81.4-1.20.70.8
Stereotopy head waving bouts, day 30.20.20.40.6-0.4-0.3
Stereotopy head waving duration, day 30.30.30.70.8-0.2-0.5
Locomotion velocity, session 70.30.30.4-0.40.60.6
Locomotion distance, session 70.60.81.1-1.00.41.0
Stereotopy head waving bouts, day 70.40.50.80.90.3-0.7
Stereotopy head waving duration, day 70.40.40.70.80.4-0.7
Locomotion velocity, session 81.11.32.0-1.30.51.4
Locomotion distance, session 80.81.11.7-1.30.81.0
Degree of sensitization distance0.00.00.00.0-0.00.1
Degree of sensitization stereotypy0.20.20.40.5-0.0-0.6
Conditioned locomotion0.50.51.0-1.00.30.7
Cocaine response after cond. corrected2.42.75.42.3-1.3-1.1
Cocaine response after cond. not corrected1.61.83.51.90.2-1.3
Cocaine response before conditioning2.73.28.4-1.12.9-0.4
Saline control response1.31.72.4-1.61.01.3
Bone: connectivity density0.10.20.4-0.6-0.10.4
Bone: cortical apparent density0.20.30.60.3-0.30.8
Bone: cortical area0.50.71.6-0.31.3-0.6
Bone: cortical porosity0.40.41.10.4-1.0-0.0
Bone: cortical porosity0.40.50.60.7-0.8-0.6
Bone: cortical thickness0.40.70.9-0.9-0.51.0
Bone: cortical thickness0.40.40.5-0.70.70.7
Bone: cortical tissue density0.20.20.50.4-0.30.7
Condit. Reinf. active minus inactive responses0.10.10.30.6-0.30.1
Condit. Reinf. active-inactive response ratio0.40.51.40.2-1.20.2
Condit. Reinf. active responses0.20.20.60.80.3-0.1
Condit. Reinf. inactive responses0.91.13.00.31.7-0.3
Incentive salience index mean0.10.10.20.30.5-0.0
Condit. Reinf. lever presses0.30.41.1-0.21.1-0.2
Condit. Reinf. active minus inactive responses1.82.26.2-0.42.5-0.7
Condit. Reinf. active-inactive response ratio2.22.34.20.62.0-1.5
Condit. Reinf. active responses2.02.87.0-1.22.60.0
Condit. Reinf. inactive responses1.01.22.2-1.50.80.9
Condit. Reinf. lever presses0.50.72.00.10.5-1.4
Condit. Reinf. lever reinforcers received2.23.17.8-1.22.80.0
Conditioned reinforcement - actives1.11.12.31.5-0.0-1.0
Conditioned reinforcement - inactives2.22.56.9-0.32.6-0.6
Conditioned locomotion1.11.42.81.70.2-1.1
Patch foraging indifference point 0 sec1.11.73.7-1.9-0.21.2
Patch foraging indifference point AUC0.30.41.00.2-1.00.1
Delay disc. indifference point, 0s delay2.32.55.7-2.40.61.2
Delay disc. indifference point, 16s delay2.12.13.31.8-1.4-1.1
Delay disc. indifference point, 2s delay0.70.81.4-1.2-0.11.0
Delay disc. indifference point, 24s delay0.70.71.11.0-1.0-0.4
Delay disc. indifference point, 4s delay0.00.00.1-0.00.3-0.2
Delay disc. indifference point, 8s delay0.50.51.3-1.1-0.30.5
Indifference point function ln k3.54.812.9-1.33.6-0.1
Indifference point function log k3.54.812.9-1.33.6-0.1
Patch foraging total patch changes 0 sec1.01.63.6-1.9-0.21.1
Patch foraging total patch changes 12 sec0.40.51.50.2-1.2-0.0
Patch foraging total patch changes 18 sec0.60.71.3-0.6-1.20.7
Patch foraging total patch changes 24 sec0.81.01.61.3-1.0-0.6
Patch foraging total patch changes 6 sec0.40.51.60.2-1.20.0
Patch foraging time to switch 0 sec6.19.514.03.7-3.3-1.9
Patch foraging water rate 0 sec1.42.33.6-1.91.60.9
Patch foraging water rate 12 sec3.55.47.5-2.72.61.3
Patch foraging water rate 18 sec1.92.63.9-2.01.61.2
Patch foraging water rate 24 sec1.21.62.1-1.41.50.9
Patch foraging water rate 6 sec2.53.610.00.23.2-0.9
Seeking ratio, delayed vs. immediate footshock2.52.96.7-2.60.51.3
Distance traveled before self-admin3.84.06.4-2.52.20.9
Distance traveled after self-admin4.65.111.4-3.41.21.6
Extensor digitorum longus weight0.20.81.80.50.6-1.3
Bone: elastic displacement0.70.81.3-1.1-0.31.0
Bone: elastic work0.81.12.1-1.41.00.3
Bone: endosteal estimation1.83.96.30.92.5-2.1
Bone: endosteal perimeter1.12.44.90.32.2-1.5
Epididymis fat weight0.81.92.71.7-1.4-1.0
Delta time in closed arm before/after self-admin0.10.10.1-0.0-0.40.2
Delta time in open arm before/after self-admin0.90.91.9-0.91.40.2
Diff in mean of infusions in LGA sessions2.22.45.3-2.30.61.3
Delay discount exponential model param0.40.50.80.90.6-0.4
Extinction: sum of active levers before priming2.72.75.5-2.30.41.5
Active lever presses in extinction session 62.01.93.71.9-1.0-1.0
Bone: final force1.01.63.30.51.8-1.2
Bone: final moment1.11.84.40.22.1-1.0
Food consumed during 24 hour testing period0.70.81.90.11.4-0.7
Glucose1.11.62.5-1.6-0.61.5
Heart weight1.31.94.5-1.02.1-0.3
Delay discount hyperbolic model param0.40.40.90.90.4-0.4
Intermittent access intake day 1-15 change0.70.72.1-0.31.5-0.1
Intermittent access intake escalation0.50.51.40.31.2-0.4
Intermittent access intake escalation 20.50.51.5-0.21.2-0.0
Intermitt. access day 1 inactive lever presses3.13.45.92.41.0-1.8
Intermitt. access day 15 inactive lever presses4.24.67.62.81.0-2.3
Intermitt. access escalation Index0.50.50.8-0.6-0.90.6
Intermittent access day 1 total infusions0.30.40.50.70.4-0.7
Intermittent access day 15 total infusions0.80.91.20.91.1-0.9
Intermittent access terminal intake (last 3 days)0.91.01.11.11.0-0.9
Intermittent access total infusions0.91.01.31.10.9-1.0
Intermittent access day 1 locomotion0.30.30.70.20.9-0.4
Intermittent access day 15 total locomotion0.50.51.4-0.41.2-0.2
Intermittent access total locomotion0.70.81.60.51.3-0.7
Intermittent access standard deviation1.61.73.71.9-0.5-1.0
Left kidney weight1.95.210.90.73.3-2.1
Right kidney weight1.84.97.21.22.7-2.5
Cocaine induced anxiety1.31.53.7-0.81.90.2
Post-drug Anxiety1.01.12.41.50.1-0.9
Baseline Anxiety3.13.35.72.4-1.7-1.1
Tail length0.82.45.6-1.22.4-0.5
Length with tail1.24.47.21.22.7-2.2
Length without tail1.43.14.72.20.9-2.0
Times rat made contact with spout0.10.10.3-0.1-0.5-0.4
Lifetime Intake0.40.50.50.70.6-0.7
Liver weight, left2.13.36.42.5-0.9-1.6
Liver weight, right1.22.03.31.8-0.5-1.6
Locomotor activity0.10.20.50.1-0.7-0.3
Locomotor testing distance0.20.30.60.4-0.4-0.8
Locomotor testing rearing0.30.51.30.50.3-1.1
Locomotion in novel chamber0.81.01.9-0.7-1.40.8
Locomotion in novel chamber post-restriction0.30.30.5-0.6-0.70.3
Fecal boli incidents, locomotor time 10.20.30.5-0.50.7-0.1
Change in fecal boli incidents, locomotor task2.22.02.6-1.2-1.61.4
Time >=10cm from walls, locomotor time 10.30.30.60.5-0.7-0.0
Bouts of movement, locomotor time 12.72.95.8-2.41.21.2
Total resting periods, locomotor time 11.31.42.9-1.70.51.1
Rest time, locomotor task time 10.91.01.40.81.2-0.9
Distance moved, locomotor task time 10.40.40.5-0.5-0.70.7
Vertical activity count, locomotor time 13.13.25.9-2.4-0.71.8
Time >=10cm from walls, locomotor time 20.80.82.00.6-1.40.3
Bouts of movement, locomotor time 20.00.00.00.0-0.1-0.1
Total resting periods, locomotor time 20.00.10.1-0.4-0.00.1
Rest time, locomotor task time 20.70.81.8-1.40.20.7
Distance moved, locomotor task time 20.00.00.0-0.0-0.10.1
Vertical activity count, locomotor time 20.50.51.2-1.1-0.00.5
Light reinforcement 11.73.15.0-2.20.62.0
Light reinforcement 21.11.53.0-0.9-0.91.7
Bone: marrow area1.83.96.40.92.5-2.1
Bone: maximum diameter0.81.52.50.31.6-1.4
Bone: maximum force1.42.43.80.62.0-1.8
Bone: maximum moment1.52.65.10.32.3-1.6
Mean time between licks in bursts0.71.01.3-1.1-0.91.0
Mean num. licks in bursts0.20.20.5-0.1-0.3-0.7
Cd content in liver0.90.91.5-1.21.10.2
Co content in liver0.80.91.9-0.70.61.4
Cu content in liver0.40.40.91.00.4-0.5
Fe content in liver0.20.30.7-0.20.30.8
K content in liver0.10.10.2-0.30.10.5
Mg content in liver0.20.20.40.3-0.60.1
Mn content in liver0.20.30.70.3-0.8-0.1
Na content in liver1.51.62.3-0.5-1.51.5
Rb content in liver0.10.10.20.40.3-0.3
Se content in liver1.11.33.80.4-1.9-0.2
Sr content in liver5.85.38.1-2.8-1.72.2
Zn content in liver1.01.12.21.5-0.7-0.8
Bone: minimum diameter1.73.17.2-0.02.7-1.5
Time in familiar zone, hab. session 13.02.84.8-1.92.20.5
Time in novel zone, hab. session 11.71.72.91.4-1.70.3
Total zone transitions, hab. session 12.02.83.2-1.71.61.8
Total locomotion distance, hab. session 11.92.64.3-2.11.01.6
Locomotion velocity, hab. session 11.21.72.7-1.70.81.3
Time in familiar zone, hab. session 22.12.23.31.31.2-1.8
Time in novel zone, hab. session 20.90.91.3-0.3-1.21.1
Total zone transitions, hab. session 21.62.14.3-1.32.10.5
Total locomotion distance, hab. session 21.41.83.8-1.90.61.2
Locomotion velocity, hab. session 21.72.34.7-2.20.61.4
Novel to familiar place preference ratio0.10.10.2-0.30.0-0.4
Novelty place preference0.10.10.1-0.30.3-0.4
Time in novel zone, NPP test0.10.10.2-0.10.3-0.5
Total zone transitions, NPP test0.50.71.2-1.10.70.7
Total locomotion distance, NPP test0.20.30.8-0.90.4-0.1
Locomotion velocity, NPP test0.50.71.6-1.30.60.3
Intraocular pressure0.10.20.5-0.10.10.7
Delta distance traveled before/after self-admin0.80.91.3-1.1-0.80.8
Delta ambulatory time before/after self-admin0.80.91.5-1.2-0.70.9
Parametrial fat weight2.03.811.20.1-3.40.4
Pavlov. Cond. lever latency0.00.00.1-0.1-0.00.4
Pavlov. Cond. magazine entry latency0.60.81.10.6-1.1-0.9
Pavlov. Cond. change in total contacts0.10.10.1-0.2-0.30.3
Pavlov. Cond. index score0.10.10.3-0.1-0.60.0
Pavlov. Cond. latency score0.10.10.3-0.1-0.5-0.1
Pavlov. Cond. lever contacts0.50.61.10.8-0.1-1.1
Pavlov. Cond. magazine entry number0.10.10.40.20.60.1
Pavlov. Cond. intertrial magazine entries1.72.13.3-1.50.71.8
Pavlov. Cond. lever-magazine prob. diff.0.10.10.40.0-0.6-0.1
Pavlov. Cond. response bias0.81.01.61.0-0.6-1.3
Pavlov. Cond. lever latency0.71.02.31.50.7-0.3
Pavlov. Cond. magazine entry latency0.40.51.4-0.2-1.2-0.3
Pavlov. Cond. change in total contacts0.81.12.6-1.60.80.3
Pavlov. Cond. index score0.20.30.5-0.7-0.5-0.3
Pavlov. Cond. latency score0.30.40.5-0.7-0.7-0.2
Pavlov. Cond. lever contacts0.20.30.8-0.9-0.2-0.4
Pavlov. Cond. magazine entry number0.20.20.50.30.70.2
Pavlov. Cond. intertrial magazine entries1.31.74.70.52.2-0.6
Pavlov. Cond. lever-magazine prob. diff.0.20.20.6-0.7-0.3-0.3
Pavlov. Cond. response bias0.20.30.5-0.70.2-0.5
Time in closed arm before self-admin0.40.50.60.80.7-0.7
Time in closed arm after self-admin0.50.51.11.0-0.2-0.5
Time in open arm before self-admin0.60.60.7-0.8-0.80.7
Time in open arm after self-admin0.50.61.2-1.1-0.00.7
Bone: periosteal estimation1.32.75.50.32.4-1.6
Bone: periosteal perimeter1.01.63.80.11.9-1.0
Bone: post-yield work1.92.54.11.51.1-2.0
Progressive ratio test 1 active lever presses0.80.81.8-0.81.30.2
Progressive ratio test 1 breakpoint0.70.71.6-0.71.30.1
Progressive ratio test 1 inactive lever presses1.61.74.20.52.1-0.8
Progressive ratio test 2 active lever presses0.60.61.20.41.1-0.7
Progressive ratio test 2 breakpoint0.80.91.50.71.2-0.8
Progressive ratio test 2 inactive lever presses1.41.63.80.41.9-0.9
Incentive Sensitization - Responses2.62.72.71.61.7-1.6
Incentive Sensitization - Breakpoint2.42.43.11.81.3-1.6
Sum of active levers in priming session hrs 5-61.31.22.7-1.60.40.9
Progressive ratio1.11.32.7-1.6-0.11.0
Food seeking constrained by brief footshock14.918.340.0-6.31.63.5
Seeking ratio, punishment vs. effort1.92.34.5-2.11.21.0
Retroperitoneal fat weight1.96.218.2-0.0-4.30.7
Reaction time number correct0.60.92.2-1.5-0.20.7
Reaction time mean minus median0.30.40.80.9-0.3-0.5
Reaction time mean minus median AUC0.60.81.51.2-0.5-0.8
Reaction time num false alarms0.10.20.4-0.70.10.3
Reaction time num false alarms AUC1.21.63.1-1.7-0.11.4
Reaction time trials correct on left0.60.92.2-1.5-0.20.7
Reaction time trials on left0.60.92.2-1.5-0.20.7
Reaction time mean1.52.14.42.10.4-1.3
Reaction time mean AUC1.62.14.62.2-0.1-1.3
Median of all reaction times1.01.42.91.70.4-1.0
Reaction time omissions0.30.40.7-0.6-0.20.8
Reaction time false alarm rate0.30.50.8-0.8-0.00.9
Reaction time premature initiation rate0.10.20.20.4-0.3-0.5
Reaction time premature initiations0.10.10.3-0.3-0.5-0.2
Std. dev. reaction times0.81.12.21.50.2-1.0
Reaction time trials completed0.60.92.2-1.5-0.20.7
Reaction time trials AUC0.40.61.6-1.3-0.30.4
Run reversals in cocaine runway, females0.60.60.90.90.1-0.9
Run reversals in cocaine runway, males0.20.20.40.70.1-0.4
Latency to leave start box in cocaine runway0.20.20.60.00.8-0.2
Latency to leave start box in cocaine runway, F0.10.10.2-0.30.5-0.1
Latency to leave start box in cocaine runway, M0.60.60.70.80.7-0.7
Std. dev. time between licks in bursts2.42.94.1-2.00.82.0
Total sessions with >9 infusions1.41.51.71.21.2-1.3
Short access day 1 total inactive lever presses2.42.75.32.30.1-1.7
Short access day 10 total inactive lever presses1.21.32.61.60.4-1.1
Short access day 1 total infusions0.00.00.1-0.10.3-0.2
Short access day 10 total infusions0.40.51.01.0-0.3-0.6
Short access total infusions0.10.10.2-0.5-0.40.3
Short access day 1 locomotion0.60.70.91.00.6-0.8
Short access day 10 total locomotion0.60.71.8-0.41.30.0
Short access total locomotion0.80.81.7-1.30.50.7
One hour access (0.3 mA shock)2.12.43.11.51.8-1.4
Compulsive drug intake0.60.61.30.21.1-0.6
One hour access (shock baseline)2.52.96.22.50.2-1.6
Social response proportion1.31.42.31.50.8-1.1
Social responses1.72.23.11.41.8-1.2
Social time3.14.18.0-2.02.80.7
Soleus weight0.00.10.1-0.30.3-0.3
Bone: stiffness1.52.33.01.21.7-1.6
Tibialis anterior weight0.41.43.2-0.1-1.8-1.0
Time to tail flick, vehicle, before self-admin0.20.20.6-0.10.8-0.2
Time to tail flick, vehicle, after self-admin1.21.32.51.60.7-0.9
Time to tail flick, test, before self-admin6.56.312.4-3.51.91.8
Time to tail flick, test, after self-admin0.00.00.10.3-0.1-0.1
Delta time to tail flick, vehicle, before/after SA0.70.71.81.3-0.3-0.6
Delta time to tail flick, test, before/after SA3.33.06.12.5-1.1-1.2
Tibia length1.95.410.00.83.2-2.4
Ambulatory time before self-admin2.52.53.7-1.91.90.7
Ambulatory time after self-admin4.95.411.0-3.31.81.4
Bone: tissue strength2.01.94.4-2.10.61.0
Total heroin consumption0.80.91.0-1.0-0.90.9
Bone: trabecular number0.40.71.5-1.20.00.8
Bone: trabecular spacing0.10.10.20.3-0.4-0.5
Bone: trabecular thickness0.00.10.10.4-0.1-0.1
Bone: trabecular tissue density2.33.25.22.3-1.9-0.8
Water consumed over 24 hours1.01.22.4-1.01.50.5
Number of responses in last shaping day1.21.22.61.60.2-1.0