Zfp513

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 PL gene expression Zfp513 0.04 0.04 1.7e-04 0.03 0.04 0.04 0.04 1.3e-04 6.7e-05 8.4e-05 5.4e-05
2 NAcc gene expression Zfp513 0.05 0.04 1.0e-07 0.05 0.05 0.05 0.05 4.6e-08 4.8e-08 3.3e-08 3.5e-08
3 BLA gene expression Zfp513 0.1 0.1 4.2e-04 0.05 0.05 0.05 0.05 9.7e-04 1.4e-03 1.1e-03 1.0e-03
4 IC gene expression Zfp513 0.36 0.28 6.8e-03 0.05 0.04 0.07 0.05 4.1e-03 1.1e-02 9.7e-04 4.5e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density4.27.39.1-3.0-2.9-2.4-2.4
Area under the delay curve0.20.20.6-0.3-0.2-0.10.8
BMI with tail0.31.01.80.80.90.91.3
BMI without tail0.41.31.91.31.31.40.0
Body weight2.19.19.93.13.03.12.8
Weight adjusted by age0.10.10.3-0.1-0.2-0.6-0.1
Bone surface3.15.68.8-2.4-2.3-1.5-3.0
Bone volume3.15.58.3-2.4-2.3-1.6-2.9
Breakpoint value in progressive ratio session0.70.81.3-0.7-0.9-1.10.8
Number of licking bursts0.00.10.1-0.3-0.20.2-0.3
Context. condit. distance diff. score0.00.00.0-0.0-0.0-0.00.1
Locomotion velocity, session 13.43.714.7-0.0-0.00.2-3.8
Locomotion distance, session 13.24.09.8-1.7-1.6-1.0-3.1
Locomotion velocity, session 20.20.30.60.50.50.7-0.2
Locomotion distance, session 21.01.45.7-0.1-0.10.1-2.4
Locomotion velocity, session 30.81.01.6-0.8-0.9-1.3-0.9
Locomotion distance, session 31.01.11.6-1.0-1.0-0.9-1.3
Stereotopy head waving bouts, day 31.61.93.3-1.4-1.5-1.80.0
Stereotopy head waving duration, day 30.20.30.6-0.3-0.3-0.80.5
Locomotion velocity, session 72.62.97.2-1.2-1.2-1.1-2.7
Locomotion distance, session 71.41.87.0-0.4-0.4-0.1-2.7
Stereotopy head waving bouts, day 70.10.20.6-0.1-0.1-0.10.8
Stereotopy head waving duration, day 70.60.81.9-0.5-0.5-0.81.4
Locomotion velocity, session 81.11.34.5-0.5-0.6-0.5-2.1
Locomotion distance, session 80.71.13.1-0.7-0.7-0.3-1.8
Degree of sensitization distance0.80.81.00.90.91.0-0.8
Degree of sensitization stereotypy0.70.82.30.50.50.51.5
Conditioned locomotion2.32.73.5-1.9-1.9-1.80.6
Cocaine response after cond. corrected0.40.50.8-0.9-0.8-0.60.4
Cocaine response after cond. not corrected1.01.21.9-1.4-1.3-1.0-0.4
Cocaine response before conditioning1.82.13.0-1.4-1.4-1.3-1.7
Saline control response0.50.71.0-1.0-0.9-0.8-0.4
Bone: connectivity density3.96.17.7-2.8-2.7-2.4-2.0
Bone: cortical apparent density0.30.40.7-0.8-0.8-0.5-0.2
Bone: cortical area0.60.91.4-1.2-1.1-0.5-0.8
Bone: cortical porosity1.01.11.4-1.1-1.1-1.2-0.7
Bone: cortical porosity1.31.41.6-1.2-1.2-1.3-1.0
Bone: cortical thickness0.10.20.6-0.2-0.10.5-0.8
Bone: cortical thickness1.41.71.9-1.4-1.4-1.1-1.3
Bone: cortical tissue density0.20.30.4-0.7-0.7-0.4-0.3
Condit. Reinf. active minus inactive responses0.50.60.80.80.90.90.2
Condit. Reinf. active-inactive response ratio0.70.70.90.91.00.70.8
Condit. Reinf. active responses0.10.10.2-0.4-0.4-0.1-0.1
Condit. Reinf. inactive responses1.21.52.2-1.5-1.5-1.0-0.8
Incentive salience index mean0.00.00.1-0.1-0.10.0-0.4
Condit. Reinf. lever presses0.50.71.0-1.0-0.9-0.7-0.6
Condit. Reinf. active minus inactive responses3.54.56.0-2.1-2.1-2.51.8
Condit. Reinf. active-inactive response ratio1.61.94.2-1.0-1.0-1.12.1
Condit. Reinf. active responses2.53.65.7-2.0-2.0-2.40.8
Condit. Reinf. inactive responses1.31.72.3-1.4-1.4-1.5-0.7
Condit. Reinf. lever presses1.82.52.7-1.6-1.6-1.51.5
Condit. Reinf. lever reinforcers received2.33.25.2-1.9-1.9-2.30.8
Conditioned reinforcement - actives1.01.63.6-1.1-1.3-1.90.3
Conditioned reinforcement - inactives3.14.55.7-2.1-1.9-2.1-2.4
Conditioned locomotion1.72.37.9-0.1-0.3-1.0-2.8
Patch foraging indifference point 0 sec0.20.40.70.70.90.5-0.2
Patch foraging indifference point AUC2.13.05.5-1.6-1.6-1.0-2.3
Delay disc. indifference point, 0s delay2.73.04.51.81.92.10.6
Delay disc. indifference point, 16s delay0.60.62.4-0.3-0.2-0.11.5
Delay disc. indifference point, 2s delay0.40.51.20.40.40.5-1.1
Delay disc. indifference point, 24s delay4.24.716.6-0.9-0.9-0.84.1
Delay disc. indifference point, 4s delay0.10.10.2-0.2-0.10.1-0.4
Delay disc. indifference point, 8s delay0.40.41.7-0.1-0.1-0.11.3
Indifference point function ln k0.10.10.3-0.10.0-0.20.6
Indifference point function log k0.10.10.3-0.10.0-0.20.6
Patch foraging total patch changes 0 sec0.20.40.70.60.80.6-0.4
Patch foraging total patch changes 12 sec0.71.01.21.11.11.0-0.7
Patch foraging total patch changes 18 sec0.30.51.90.10.10.3-1.4
Patch foraging total patch changes 24 sec0.71.11.21.11.01.1-1.1
Patch foraging total patch changes 6 sec0.40.72.50.30.30.1-1.6
Patch foraging time to switch 0 sec0.71.55.70.40.3-0.02.4
Patch foraging water rate 0 sec0.30.62.3-0.3-0.2-0.1-1.5
Patch foraging water rate 12 sec0.81.62.21.51.41.40.3
Patch foraging water rate 18 sec0.40.61.01.01.00.70.2
Patch foraging water rate 24 sec2.43.44.51.91.81.52.1
Patch foraging water rate 6 sec0.91.41.81.41.31.30.4
Seeking ratio, delayed vs. immediate footshock2.73.313.00.10.2-0.1-3.6
Distance traveled before self-admin0.20.20.70.0-0.10.50.8
Distance traveled after self-admin1.72.03.61.41.31.91.0
Extensor digitorum longus weight3.313.117.9-4.2-4.2-4.00.7
Bone: elastic displacement0.60.71.0-0.7-0.7-1.01.0
Bone: elastic work1.01.31.6-1.1-1.0-1.11.3
Bone: endosteal estimation0.61.31.8-1.3-1.3-1.1-0.7
Bone: endosteal perimeter0.20.50.7-0.8-0.8-0.60.4
Epididymis fat weight14.148.262.67.97.77.04.7
Delta time in closed arm before/after self-admin0.70.72.6-0.1-0.2-0.01.6
Delta time in open arm before/after self-admin0.10.10.3-0.3-0.2-0.6-0.0
Diff in mean of infusions in LGA sessions0.30.41.50.0-0.2-0.2-1.2
Delay discount exponential model param0.30.40.70.60.50.4-0.8
Extinction: sum of active levers before priming0.20.30.4-0.4-0.6-0.60.5
Active lever presses in extinction session 60.70.71.7-0.5-0.7-1.3-0.5
Bone: final force0.10.20.3-0.5-0.5-0.2-0.4
Bone: final moment0.10.20.4-0.6-0.5-0.2-0.4
Food consumed during 24 hour testing period0.20.30.5-0.6-0.5-0.3-0.7
Glucose0.30.40.80.50.50.6-0.9
Heart weight2.33.65.52.02.02.3-1.1
Delay discount hyperbolic model param0.10.10.20.40.40.3-0.3
Intermittent access intake day 1-15 change0.10.10.4-0.2-0.6-0.10.1
Intermittent access intake escalation0.00.00.10.1-0.30.20.1
Intermittent access intake escalation 21.71.97.3-0.1-0.40.3-2.7
Intermitt. access day 1 inactive lever presses0.62.23.8-1.3-1.1-1.4-1.9
Intermitt. access day 15 inactive lever presses6.313.026.0-3.3-2.9-2.6-5.1
Intermitt. access escalation Index0.70.92.90.30.30.8-1.7
Intermittent access day 1 total infusions2.64.26.4-2.2-2.0-2.5-1.3
Intermittent access day 15 total infusions1.31.92.4-1.4-1.6-1.5-1.0
Intermittent access terminal intake (last 3 days)1.92.53.3-1.6-1.8-1.8-1.0
Intermittent access total infusions1.82.13.7-1.3-1.4-1.91.0
Intermittent access day 1 locomotion1.21.62.8-1.3-1.3-1.70.1
Intermittent access day 15 total locomotion0.20.40.7-0.4-0.4-0.7-0.9
Intermittent access total locomotion0.20.30.9-0.3-0.4-1.0-0.0
Intermittent access standard deviation0.91.82.8-1.1-1.2-1.3-1.7
Left kidney weight0.10.41.30.30.30.11.2
Right kidney weight0.73.46.41.61.51.52.5
Cocaine induced anxiety0.71.03.1-0.6-0.7-0.5-1.8
Post-drug Anxiety1.01.01.61.11.11.30.3
Baseline Anxiety3.94.55.72.02.11.92.4
Tail length0.41.42.21.51.21.3-0.2
Length with tail1.77.49.93.22.92.81.9
Length without tail0.82.64.21.51.51.32.1
Times rat made contact with spout1.61.82.3-1.5-1.5-1.21.1
Lifetime Intake1.82.24.3-1.5-1.4-2.10.5
Liver weight, left2.94.76.72.52.62.40.4
Liver weight, right7.513.018.04.24.24.00.8
Locomotor activity0.30.50.70.80.80.60.8
Locomotor testing distance0.10.30.5-0.3-0.4-0.60.7
Locomotor testing rearing0.81.62.8-0.7-0.9-1.51.7
Locomotion in novel chamber0.81.03.30.50.5-0.11.8
Locomotion in novel chamber post-restriction2.84.66.12.52.41.81.8
Fecal boli incidents, locomotor time 10.40.51.2-0.6-0.5-0.61.1
Change in fecal boli incidents, locomotor task3.33.34.62.12.12.00.5
Time >=10cm from walls, locomotor time 12.32.49.30.40.30.33.1
Bouts of movement, locomotor time 11.92.23.0-1.5-1.5-1.11.7
Total resting periods, locomotor time 12.02.32.7-1.6-1.6-1.31.4
Rest time, locomotor task time 10.10.10.10.20.20.1-0.4
Distance moved, locomotor task time 10.91.42.01.11.11.11.4
Vertical activity count, locomotor time 10.51.33.60.70.70.81.9
Time >=10cm from walls, locomotor time 20.20.30.6-0.4-0.5-0.4-0.8
Bouts of movement, locomotor time 20.30.51.40.20.20.61.2
Total resting periods, locomotor time 20.00.10.2-0.2-0.20.30.5
Rest time, locomotor task time 21.72.13.6-1.3-1.3-1.1-1.9
Distance moved, locomotor task time 21.01.21.41.11.11.01.2
Vertical activity count, locomotor time 20.81.12.50.80.80.71.6
Light reinforcement 12.66.38.0-2.8-2.8-2.2-2.1
Light reinforcement 23.35.06.9-2.3-2.3-1.6-2.6
Bone: marrow area0.61.21.7-1.3-1.3-1.1-0.5
Bone: maximum diameter0.91.72.8-1.7-1.6-1.2-0.3
Bone: maximum force0.10.20.4-0.6-0.6-0.40.0
Bone: maximum moment0.20.30.6-0.8-0.7-0.5-0.1
Mean time between licks in bursts1.22.83.81.92.01.90.0
Mean num. licks in bursts0.20.30.8-0.4-0.4-0.50.9
Cd content in liver0.00.00.0-0.0-0.10.0-0.0
Co content in liver4.35.07.5-2.7-2.7-2.2-0.4
Cu content in liver0.10.10.2-0.3-0.3-0.4-0.0
Fe content in liver1.01.32.7-0.9-1.0-1.6-0.8
K content in liver2.42.37.8-0.8-0.9-0.3-2.8
Mg content in liver1.71.75.2-0.9-0.9-0.3-2.3
Mn content in liver0.70.82.9-0.3-0.3-0.4-1.7
Na content in liver1.11.22.8-0.8-0.8-0.8-1.7
Rb content in liver0.10.10.2-0.1-0.1-0.2-0.4
Se content in liver0.20.30.90.40.3-0.0-0.9
Sr content in liver0.20.20.30.40.40.50.5
Zn content in liver0.91.01.40.90.81.1-1.2
Bone: minimum diameter0.20.30.90.10.10.4-1.0
Time in familiar zone, hab. session 10.40.40.60.70.70.8-0.1
Time in novel zone, hab. session 10.70.71.00.90.90.31.0
Total zone transitions, hab. session 10.10.10.2-0.4-0.4-0.1-0.4
Total locomotion distance, hab. session 10.40.61.8-0.5-0.5-0.2-1.3
Locomotion velocity, hab. session 11.11.62.3-1.3-1.3-0.8-1.5
Time in familiar zone, hab. session 20.10.10.2-0.1-0.10.1-0.5
Time in novel zone, hab. session 20.60.60.80.80.80.50.9
Total zone transitions, hab. session 20.20.31.0-0.4-0.3-0.0-1.0
Total locomotion distance, hab. session 20.50.61.8-0.6-0.6-0.1-1.4
Locomotion velocity, hab. session 20.50.71.4-0.8-0.8-0.3-1.2
Novel to familiar place preference ratio1.11.21.41.11.11.21.0
Novelty place preference1.61.72.01.41.41.41.1
Time in novel zone, NPP test1.82.02.21.51.51.41.2
Total zone transitions, NPP test1.52.22.7-1.5-1.5-1.3-1.6
Total locomotion distance, NPP test1.72.32.9-1.7-1.7-1.5-1.1
Locomotion velocity, NPP test2.53.54.8-2.2-2.2-1.8-1.1
Intraocular pressure5.78.19.42.93.12.82.6
Delta distance traveled before/after self-admin1.11.11.51.11.21.2-0.5
Delta ambulatory time before/after self-admin0.30.41.20.20.30.5-1.1
Parametrial fat weight8.720.634.14.84.95.8-0.7
Pavlov. Cond. lever latency1.92.43.21.61.61.21.8
Pavlov. Cond. magazine entry latency0.50.72.4-0.4-0.4-0.3-1.6
Pavlov. Cond. change in total contacts0.30.31.0-0.3-0.2-0.1-1.0
Pavlov. Cond. index score1.51.94.9-1.1-1.0-0.7-2.2
Pavlov. Cond. latency score1.62.05.3-1.1-1.0-0.7-2.3
Pavlov. Cond. lever contacts1.51.83.2-1.3-1.2-0.9-1.8
Pavlov. Cond. magazine entry number1.41.85.40.90.80.62.3
Pavlov. Cond. intertrial magazine entries1.21.41.6-1.2-1.1-1.31.2
Pavlov. Cond. lever-magazine prob. diff.1.72.13.3-1.4-1.4-1.1-1.8
Pavlov. Cond. response bias1.82.33.8-1.4-1.4-1.2-1.9
Pavlov. Cond. lever latency1.31.81.91.31.41.2-1.3
Pavlov. Cond. magazine entry latency0.50.61.3-0.6-0.6-0.4-1.1
Pavlov. Cond. change in total contacts0.71.12.0-0.9-0.9-0.81.4
Pavlov. Cond. index score0.81.11.5-1.2-1.2-1.10.4
Pavlov. Cond. latency score0.81.11.6-1.2-1.3-1.00.0
Pavlov. Cond. lever contacts1.11.52.6-1.1-1.1-1.01.6
Pavlov. Cond. magazine entry number0.10.10.30.50.50.3-0.1
Pavlov. Cond. intertrial magazine entries3.04.65.92.42.42.21.4
Pavlov. Cond. lever-magazine prob. diff.0.50.71.1-1.0-1.0-0.80.1
Pavlov. Cond. response bias1.42.02.2-1.5-1.5-1.41.3
Time in closed arm before self-admin0.91.21.31.11.10.9-1.1
Time in closed arm after self-admin1.01.11.81.31.30.90.4
Time in open arm before self-admin0.50.62.0-0.2-0.40.11.4
Time in open arm after self-admin1.11.21.8-1.3-1.3-1.1-0.4
Bone: periosteal estimation0.91.92.9-1.7-1.6-1.1-0.9
Bone: periosteal perimeter0.40.61.0-1.0-1.0-0.60.3
Bone: post-yield work0.81.11.4-1.1-1.1-1.20.8
Progressive ratio test 1 active lever presses1.01.22.6-1.1-0.9-1.60.3
Progressive ratio test 1 breakpoint1.01.22.6-1.1-0.9-1.60.6
Progressive ratio test 1 inactive lever presses2.43.45.8-2.0-1.9-2.4-0.7
Progressive ratio test 2 active lever presses0.30.40.7-0.2-0.3-0.80.8
Progressive ratio test 2 breakpoint0.20.30.5-0.1-0.3-0.70.7
Progressive ratio test 2 inactive lever presses1.32.22.8-1.3-1.4-1.7-1.5
Incentive Sensitization - Responses0.10.10.3-0.2-0.5-0.40.3
Incentive Sensitization - Breakpoint0.10.10.2-0.1-0.4-0.3-0.4
Sum of active levers in priming session hrs 5-61.41.33.7-0.8-0.8-0.4-1.9
Progressive ratio0.10.10.40.00.3-0.1-0.6
Food seeking constrained by brief footshock4.35.36.7-2.0-2.0-2.5-2.6
Seeking ratio, punishment vs. effort0.30.40.7-0.6-0.8-0.7-0.5
Retroperitoneal fat weight16.369.494.39.79.79.41.3
Reaction time number correct0.40.81.2-1.1-1.0-0.7-0.8
Reaction time mean minus median0.00.00.00.10.1-0.1-0.2
Reaction time mean minus median AUC0.00.10.10.30.40.3-0.2
Reaction time num false alarms0.00.00.1-0.10.00.3-0.2
Reaction time num false alarms AUC0.00.00.1-0.1-0.00.4-0.2
Reaction time trials correct on left0.40.81.2-1.1-1.0-0.7-0.8
Reaction time trials on left0.50.91.3-1.1-1.0-0.7-0.9
Reaction time mean0.91.42.21.21.41.5-0.1
Reaction time mean AUC0.81.21.81.11.31.3-0.5
Median of all reaction times1.11.62.81.31.41.7-0.1
Reaction time omissions0.50.82.8-0.3-0.3-0.3-1.7
Reaction time false alarm rate0.20.20.40.40.50.7-0.2
Reaction time premature initiation rate0.20.30.50.70.50.3-0.6
Reaction time premature initiations0.10.20.80.1-0.1-0.0-0.9
Std. dev. reaction times0.30.50.60.60.70.7-0.8
Reaction time trials completed0.50.91.3-1.1-1.0-0.7-0.9
Reaction time trials AUC0.51.01.5-1.2-1.1-0.8-0.8
Run reversals in cocaine runway, females0.10.10.30.30.30.30.6
Run reversals in cocaine runway, males4.04.016.0-0.0-0.0-0.34.0
Latency to leave start box in cocaine runway0.91.02.1-0.7-0.9-0.8-1.5
Latency to leave start box in cocaine runway, F0.20.20.4-0.4-0.7-0.4-0.1
Latency to leave start box in cocaine runway, M1.41.34.9-0.2-0.2-0.4-2.2
Std. dev. time between licks in bursts0.30.41.40.10.10.6-1.2
Total sessions with >9 infusions0.60.71.8-0.7-0.7-1.30.3
Short access day 1 total inactive lever presses6.89.010.1-3.2-3.0-3.0-2.8
Short access day 10 total inactive lever presses1.53.74.6-2.1-1.9-2.0-1.5
Short access day 1 total infusions3.03.96.8-2.0-2.0-2.6-0.9
Short access day 10 total infusions1.41.83.3-1.5-1.3-1.80.3
Short access total infusions0.91.12.5-1.0-0.9-1.6-0.3
Short access day 1 locomotion2.02.44.7-1.5-1.6-2.2-0.4
Short access day 10 total locomotion1.01.82.1-1.3-1.2-1.4-1.4
Short access total locomotion0.20.20.5-0.2-0.1-0.7-0.4
One hour access (0.3 mA shock)1.01.21.4-1.2-1.1-1.2-0.9
Compulsive drug intake1.01.22.00.60.91.31.4
One hour access (shock baseline)1.21.82.8-1.3-1.5-1.7-0.7
Social response proportion0.30.30.40.60.60.5-0.4
Social responses0.30.41.30.20.30.4-1.1
Social time1.41.96.50.70.60.6-2.6
Soleus weight3.39.614.2-3.7-3.8-3.20.2
Bone: stiffness0.00.10.2-0.2-0.20.10.4
Tibialis anterior weight2.79.113.3-3.6-3.6-3.20.0
Time to tail flick, vehicle, before self-admin1.21.31.81.31.20.71.2
Time to tail flick, vehicle, after self-admin3.24.25.62.32.42.01.4
Time to tail flick, test, before self-admin0.10.10.4-0.0-0.1-0.40.7
Time to tail flick, test, after self-admin0.20.20.8-0.1-0.2-0.2-0.9
Delta time to tail flick, vehicle, before/after SA0.10.10.10.20.30.3-0.1
Delta time to tail flick, test, before/after SA1.51.51.8-1.3-1.3-0.9-1.3
Tibia length2.05.47.32.62.72.7-0.8
Ambulatory time before self-admin0.10.20.5-0.1-0.20.30.7
Ambulatory time after self-admin0.91.12.31.00.91.50.4
Bone: tissue strength1.61.63.61.01.01.01.9
Total heroin consumption2.22.53.8-1.7-2.0-1.6-0.8
Bone: trabecular number3.55.86.6-2.6-2.5-2.1-2.4
Bone: trabecular spacing3.64.86.52.22.11.82.5
Bone: trabecular thickness1.41.73.6-1.1-1.1-0.8-1.9
Bone: trabecular tissue density0.30.40.6-0.8-0.8-0.6-0.2
Water consumed over 24 hours0.50.70.9-1.0-0.9-0.4-0.8
Number of responses in last shaping day0.20.20.4-0.2-0.4-0.60.5