Zfp513

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 PL gene expression Zfp513 0.06 0.06 1.9e-04 0.03 0.03 0.02 0.03 2.6e-04 3.9e-04 2.4e-03 3.0e-04
2 NAcc gene expression Zfp513 0.05 0.04 1.3e-06 0.05 0.05 0.04 0.05 4.7e-06 1.8e-06 5.5e-06 2.9e-06
3 BLA gene expression Zfp513 0.09 0.09 9.1e-04 0.04 0.04 0.02 0.04 2.3e-03 2.5e-03 2.1e-02 2.9e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
Bone: apparent density5.08.49.73.1-3.02.5
Area under the delay curve0.00.00.0-0.1-0.2-0.2
BMI with tail0.31.11.3-1.01.1-1.1
BMI without tail0.20.30.5-0.70.6-0.4
Body weight1.87.68.2-2.92.8-2.6
Weight adjusted by age0.00.00.10.1-0.00.2
Bone surface2.54.45.72.4-2.21.6
Bone volume2.74.65.82.4-2.21.7
Breakpoint value in progressive ratio session1.11.21.80.8-1.11.3
Number of licking bursts0.10.10.30.3-0.2-0.5
Context. condit. distance diff. score0.00.00.0-0.10.1-0.2
Locomotion velocity, session 10.00.00.10.00.1-0.3
Locomotion distance, session 11.62.12.81.7-1.60.9
Locomotion velocity, session 20.30.30.5-0.50.5-0.7
Locomotion distance, session 20.00.00.00.1-0.0-0.2
Locomotion velocity, session 30.80.91.30.8-0.81.1
Locomotion distance, session 30.91.01.21.1-1.00.9
Stereotopy head waving bouts, day 32.12.53.11.5-1.51.8
Stereotopy head waving duration, day 30.20.20.50.3-0.40.7
Locomotion velocity, session 71.11.21.41.2-1.11.0
Locomotion distance, session 70.00.10.10.4-0.20.0
Stereotopy head waving bouts, day 70.00.00.0-0.10.1-0.1
Stereotopy head waving duration, day 70.40.40.60.6-0.60.8
Locomotion velocity, session 80.20.20.30.6-0.40.5
Locomotion distance, session 80.20.30.50.7-0.70.2
Degree of sensitization distance0.80.80.9-0.90.9-1.0
Degree of sensitization stereotypy0.20.20.3-0.50.4-0.5
Conditioned locomotion3.13.73.81.9-2.01.9
Cocaine response after cond. corrected0.70.81.11.0-1.00.5
Cocaine response after cond. not corrected1.61.82.31.5-1.50.9
Cocaine response before conditioning1.31.61.81.2-1.21.3
Saline control response0.70.91.21.1-1.00.8
Bone: connectivity density4.87.68.52.9-2.92.4
Bone: cortical apparent density0.20.30.40.6-0.70.4
Bone: cortical area0.30.40.70.8-0.70.3
Bone: cortical porosity1.61.82.41.2-1.21.5
Bone: cortical porosity1.31.41.71.1-1.11.3
Bone: cortical thickness0.10.20.4-0.10.2-0.7
Bone: cortical thickness1.41.61.91.4-1.41.0
Bone: cortical tissue density0.20.20.30.5-0.60.3
Condit. Reinf. active minus inactive responses0.60.70.7-0.80.8-0.8
Condit. Reinf. active-inactive response ratio0.60.70.9-0.90.9-0.6
Condit. Reinf. active responses0.10.10.20.4-0.50.1
Condit. Reinf. inactive responses1.51.82.21.5-1.50.9
Incentive salience index mean0.00.00.00.1-0.1-0.0
Condit. Reinf. lever presses0.40.60.80.9-0.90.5
Condit. Reinf. active minus inactive responses4.25.26.22.1-2.22.5
Condit. Reinf. active-inactive response ratio1.01.11.21.0-1.01.1
Condit. Reinf. active responses3.44.75.92.0-2.12.4
Condit. Reinf. inactive responses1.82.32.71.4-1.51.6
Condit. Reinf. lever presses1.82.52.81.6-1.71.4
Condit. Reinf. lever reinforcers received3.04.35.51.8-2.02.3
Conditioned reinforcement - actives1.51.52.11.1-1.01.5
Conditioned reinforcement - inactives3.33.73.92.0-1.82.0
Conditioned locomotion0.40.51.40.2-0.31.2
Patch foraging indifference point 0 sec0.30.40.6-0.70.8-0.5
Patch foraging indifference point AUC2.42.83.31.8-1.71.5
Delay disc. indifference point, 0s delay3.74.15.3-1.91.8-2.3
Delay disc. indifference point, 16s delay0.10.10.30.3-0.50.1
Delay disc. indifference point, 2s delay0.30.40.5-0.50.5-0.7
Delay disc. indifference point, 24s delay0.90.91.50.8-1.20.7
Delay disc. indifference point, 4s delay0.00.00.10.1-0.0-0.2
Delay disc. indifference point, 8s delay0.00.00.10.0-0.3-0.0
Indifference point function ln k0.00.00.0-0.10.2-0.2
Indifference point function log k0.00.00.0-0.10.2-0.2
Patch foraging total patch changes 0 sec0.20.40.4-0.60.7-0.5
Patch foraging total patch changes 12 sec0.70.91.0-0.91.0-0.9
Patch foraging total patch changes 18 sec0.00.00.00.10.1-0.0
Patch foraging total patch changes 24 sec0.70.81.0-0.91.0-0.9
Patch foraging total patch changes 6 sec0.00.00.1-0.20.20.1
Patch foraging time to switch 0 sec0.00.00.0-0.20.00.1
Patch foraging water rate 0 sec0.00.00.00.1-0.00.0
Patch foraging water rate 12 sec1.72.52.7-1.61.6-1.6
Patch foraging water rate 18 sec0.60.80.9-0.90.9-0.9
Patch foraging water rate 24 sec2.23.03.7-1.91.7-1.6
Patch foraging water rate 6 sec1.42.02.3-1.31.4-1.5
Seeking ratio, delayed vs. immediate footshock0.00.00.10.20.10.3
Distance traveled before self-admin0.00.00.10.1-0.1-0.3
Distance traveled after self-admin0.91.11.6-0.90.9-1.3
Extensor digitorum longus weight4.417.418.24.2-4.34.0
Bone: elastic displacement0.80.91.30.8-0.91.1
Bone: elastic work1.11.41.51.1-1.21.2
Bone: endosteal estimation0.40.91.11.0-1.00.9
Bone: endosteal perimeter0.10.30.40.6-0.60.5
Epididymis fat weight14.233.136.7-6.15.9-5.3
Delta time in closed arm before/after self-admin0.10.00.1-0.20.2-0.3
Delta time in open arm before/after self-admin0.40.40.60.6-0.60.8
Diff in mean of infusions in LGA sessions0.20.20.30.3-0.50.5
Delay discount exponential model param0.10.10.2-0.20.5-0.1
Extinction: sum of active levers before priming0.30.30.40.4-0.70.5
Active lever presses in extinction session 60.70.71.60.4-0.61.2
Bone: final force0.10.20.30.5-0.40.1
Bone: final moment0.10.20.40.6-0.50.2
Food consumed during 24 hour testing period0.20.20.40.6-0.50.0
Glucose0.20.20.3-0.50.6-0.4
Heart weight9.213.014.4-3.33.7-3.8
Delay discount hyperbolic model param0.10.10.2-0.30.5-0.2
Intermittent access intake day 1-15 change0.10.10.20.5-0.30.1
Intermittent access intake escalation0.00.00.00.2-0.1-0.2
Intermittent access intake escalation 20.20.20.6-0.10.4-0.8
Intermitt. access day 1 inactive lever presses0.30.30.60.8-0.30.4
Intermitt. access day 15 inactive lever presses9.810.713.33.6-3.03.1
Intermitt. access escalation Index0.10.10.2-0.00.3-0.4
Intermittent access day 1 total infusions5.66.57.02.5-2.52.6
Intermittent access day 15 total infusions2.52.83.01.7-1.71.6
Intermittent access terminal intake (last 3 days)2.12.32.41.6-1.51.5
Intermittent access total infusions2.32.53.01.5-1.51.7
Intermittent access day 1 locomotion2.22.42.41.5-1.61.5
Intermittent access day 15 total locomotion0.80.80.90.9-0.90.9
Intermittent access total locomotion0.30.40.60.5-0.60.8
Intermittent access standard deviation0.20.20.30.3-0.40.5
Left kidney weight0.00.10.1-0.10.1-0.4
Right kidney weight1.33.74.5-1.81.8-2.1
Cocaine induced anxiety0.40.50.60.8-0.60.6
Post-drug Anxiety0.91.01.6-0.80.8-1.3
Baseline Anxiety1.71.82.2-1.31.2-1.5
Tail length0.10.40.8-0.90.5-0.4
Length with tail1.65.86.6-2.62.3-2.3
Length without tail0.71.61.9-1.21.2-1.4
Times rat made contact with spout1.71.92.41.5-1.61.1
Lifetime Intake3.33.74.61.8-1.82.1
Liver weight, left1.42.22.8-1.31.4-1.7
Liver weight, right9.215.416.4-3.83.9-4.1
Locomotor activity0.30.50.6-0.70.6-0.7
Locomotor testing distance0.10.10.20.3-0.40.4
Locomotor testing rearing0.91.42.50.9-1.01.6
Locomotion in novel chamber0.91.11.8-1.41.1-0.6
Locomotion in novel chamber post-restriction2.12.53.3-1.81.6-1.2
Fecal boli incidents, locomotor time 10.30.30.40.6-0.50.6
Change in fecal boli incidents, locomotor task4.54.34.6-2.22.1-2.0
Time >=10cm from walls, locomotor time 10.10.10.1-0.40.2-0.3
Bouts of movement, locomotor time 12.22.42.81.6-1.71.3
Total resting periods, locomotor time 12.62.83.11.8-1.81.5
Rest time, locomotor task time 10.10.10.30.2-0.20.5
Distance moved, locomotor task time 11.31.41.5-1.11.2-1.2
Vertical activity count, locomotor time 10.70.71.0-0.70.7-1.0
Time >=10cm from walls, locomotor time 20.10.10.20.3-0.30.4
Bouts of movement, locomotor time 20.20.20.4-0.30.3-0.7
Total resting periods, locomotor time 20.00.00.10.1-0.0-0.3
Rest time, locomotor task time 21.41.61.71.3-1.31.2
Distance moved, locomotor task time 20.91.11.1-1.11.1-1.0
Vertical activity count, locomotor time 20.40.50.6-0.70.7-0.6
Light reinforcement 14.27.69.13.0-2.82.4
Light reinforcement 23.75.06.32.5-2.31.8
Bone: marrow area0.51.01.11.1-1.00.9
Bone: maximum diameter0.81.51.91.4-1.31.0
Bone: maximum force0.00.00.10.3-0.1-0.0
Bone: maximum moment0.00.10.10.4-0.30.1
Mean time between licks in bursts2.73.84.3-1.91.9-2.1
Mean num. licks in bursts0.20.30.50.4-0.40.7
Cd content in liver0.00.00.00.1-0.0-0.0
Co content in liver5.16.06.52.6-2.52.2
Cu content in liver0.00.00.10.1-0.20.3
Fe content in liver0.00.10.2-0.10.10.4
K content in liver0.20.20.4-0.10.2-0.7
Mg content in liver0.20.30.5-0.30.4-0.7
Mn content in liver0.60.70.80.8-0.80.9
Na content in liver0.50.50.70.8-0.70.6
Rb content in liver0.00.00.0-0.10.1-0.1
Se content in liver0.20.30.4-0.60.6-0.4
Sr content in liver0.20.20.5-0.30.3-0.7
Zn content in liver1.51.61.8-1.31.2-1.3
Bone: minimum diameter0.10.10.2-0.30.4-0.4
Time in familiar zone, hab. session 10.70.60.7-0.70.8-0.8
Time in novel zone, hab. session 10.50.50.9-0.90.8-0.3
Total zone transitions, hab. session 10.10.10.10.4-0.40.0
Total locomotion distance, hab. session 10.10.20.30.5-0.50.3
Locomotion velocity, hab. session 10.91.31.71.3-1.20.8
Time in familiar zone, hab. session 20.00.00.00.2-0.1-0.0
Time in novel zone, hab. session 20.50.50.8-0.90.7-0.5
Total zone transitions, hab. session 20.10.10.10.3-0.4-0.1
Total locomotion distance, hab. session 20.20.20.40.6-0.50.1
Locomotion velocity, hab. session 20.30.50.60.8-0.80.3
Novel to familiar place preference ratio1.21.21.3-1.11.0-1.1
Novelty place preference1.81.81.9-1.41.3-1.4
Time in novel zone, NPP test2.02.02.3-1.51.4-1.3
Total zone transitions, NPP test1.31.92.11.5-1.41.2
Total locomotion distance, NPP test1.92.72.91.7-1.71.5
Locomotion velocity, NPP test3.14.44.82.2-2.21.8
Intraocular pressure5.98.28.6-2.92.8-2.9
Delta distance traveled before/after self-admin1.21.31.5-1.01.2-1.1
Delta ambulatory time before/after self-admin0.20.20.2-0.30.5-0.5
Parametrial fat weight6.112.014.8-3.13.4-3.8
Pavlov. Cond. lever latency1.72.22.7-1.61.5-1.2
Pavlov. Cond. magazine entry latency0.00.00.00.2-0.20.1
Pavlov. Cond. change in total contacts0.00.00.10.3-0.20.0
Pavlov. Cond. index score0.70.81.21.1-1.00.6
Pavlov. Cond. latency score0.60.81.21.1-1.00.6
Pavlov. Cond. lever contacts1.01.11.51.2-1.10.7
Pavlov. Cond. magazine entry number0.40.50.7-0.90.8-0.5
Pavlov. Cond. intertrial magazine entries1.21.41.51.2-1.21.2
Pavlov. Cond. lever-magazine prob. diff.1.51.82.21.5-1.41.1
Pavlov. Cond. response bias1.41.72.11.4-1.41.1
Pavlov. Cond. lever latency1.62.22.5-1.51.6-1.3
Pavlov. Cond. magazine entry latency0.30.40.50.7-0.60.5
Pavlov. Cond. change in total contacts0.50.70.90.9-1.00.6
Pavlov. Cond. index score1.11.41.61.3-1.21.0
Pavlov. Cond. latency score1.11.31.61.3-1.21.0
Pavlov. Cond. lever contacts0.71.01.21.0-1.10.8
Pavlov. Cond. magazine entry number0.10.10.2-0.50.4-0.2
Pavlov. Cond. intertrial magazine entries3.44.45.2-2.32.1-1.8
Pavlov. Cond. lever-magazine prob. diff.0.70.91.21.1-1.00.8
Pavlov. Cond. response bias1.52.02.41.5-1.51.2
Time in closed arm before self-admin0.50.50.6-0.80.7-0.7
Time in closed arm after self-admin1.41.41.9-1.41.2-0.9
Time in open arm before self-admin0.10.10.20.1-0.1-0.4
Time in open arm after self-admin1.92.02.51.6-1.51.1
Bone: periosteal estimation0.61.21.61.3-1.10.8
Bone: periosteal perimeter0.20.30.40.7-0.60.2
Bone: post-yield work0.40.60.60.8-0.80.7
Progressive ratio test 1 active lever presses1.81.82.81.1-1.21.7
Progressive ratio test 1 breakpoint1.51.62.51.1-1.11.6
Progressive ratio test 1 inactive lever presses4.85.37.02.2-2.02.6
Progressive ratio test 2 active lever presses0.10.10.30.1-0.20.6
Progressive ratio test 2 breakpoint0.20.20.50.2-0.30.7
Progressive ratio test 2 inactive lever presses2.52.93.41.7-1.51.8
Incentive Sensitization - Responses0.10.10.1-0.30.2-0.1
Incentive Sensitization - Breakpoint0.20.20.2-0.40.4-0.3
Sum of active levers in priming session hrs 5-60.70.70.90.9-1.00.6
Progressive ratio0.10.10.40.1-0.10.6
Food seeking constrained by brief footshock4.75.88.32.1-2.12.9
Seeking ratio, punishment vs. effort0.40.50.60.7-0.80.6
Retroperitoneal fat weight21.269.572.1-8.48.5-8.1
Reaction time number correct0.50.81.11.0-0.90.7
Reaction time mean minus median0.00.00.1-0.10.10.2
Reaction time mean minus median AUC0.00.00.1-0.20.3-0.1
Reaction time num false alarms0.00.10.10.3-0.2-0.0
Reaction time num false alarms AUC0.10.10.10.4-0.3-0.1
Reaction time trials correct on left0.50.81.11.0-0.90.7
Reaction time trials on left0.60.81.11.1-0.90.7
Reaction time mean1.21.61.7-1.21.3-1.3
Reaction time mean AUC1.01.31.4-1.11.2-1.1
Median of all reaction times1.31.82.2-1.21.3-1.5
Reaction time omissions0.10.10.10.4-0.30.3
Reaction time false alarm rate0.10.10.2-0.20.2-0.5
Reaction time premature initiation rate0.20.30.4-0.60.5-0.4
Reaction time premature initiations0.00.00.0-0.0-0.0-0.0
Std. dev. reaction times0.30.40.5-0.60.7-0.6
Reaction time trials completed0.60.81.11.1-0.90.7
Reaction time trials AUC0.81.11.41.2-1.10.9
Run reversals in cocaine runway, females0.20.20.2-0.50.3-0.4
Run reversals in cocaine runway, males0.10.10.20.3-0.40.4
Latency to leave start box in cocaine runway0.50.50.60.7-0.80.7
Latency to leave start box in cocaine runway, F0.50.50.70.7-0.80.6
Latency to leave start box in cocaine runway, M0.80.71.10.7-0.71.1
Std. dev. time between licks in bursts0.20.20.6-0.20.3-0.8
Total sessions with >9 infusions2.83.14.71.5-1.52.2
Short access day 1 total inactive lever presses5.66.27.52.7-2.42.3
Short access day 10 total inactive lever presses1.31.41.91.4-1.11.1
Short access day 1 total infusions5.55.97.42.3-2.22.7
Short access day 10 total infusions4.34.85.52.1-2.12.3
Short access total infusions3.33.74.91.8-1.72.2
Short access day 1 locomotion7.07.69.62.5-2.63.1
Short access day 10 total locomotion0.80.91.01.0-0.90.9
Short access total locomotion0.70.71.00.8-0.71.0
One hour access (0.3 mA shock)1.82.12.31.5-1.51.4
Compulsive drug intake0.50.50.9-0.50.6-1.0
One hour access (shock baseline)1.92.22.81.3-1.41.7
Social response proportion0.30.30.3-0.60.6-0.5
Social responses0.10.10.2-0.10.2-0.4
Social time0.30.40.5-0.50.7-0.6
Soleus weight4.011.612.93.6-3.63.0
Bone: stiffness0.00.00.1-0.10.1-0.3
Tibialis anterior weight3.511.812.63.5-3.53.2
Time to tail flick, vehicle, before self-admin2.52.63.2-1.81.6-1.3
Time to tail flick, vehicle, after self-admin4.34.65.0-2.22.2-1.9
Time to tail flick, test, before self-admin0.60.60.70.6-0.70.9
Time to tail flick, test, after self-admin0.10.10.2-0.40.3-0.3
Delta time to tail flick, vehicle, before/after SA0.00.00.0-0.00.1-0.1
Delta time to tail flick, test, before/after SA0.30.30.40.6-0.60.3
Tibia length2.36.66.9-2.52.6-2.6
Ambulatory time before self-admin0.10.10.10.3-0.3-0.0
Ambulatory time after self-admin0.60.61.1-0.60.7-1.0
Bone: tissue strength1.01.01.1-1.00.9-1.0
Total heroin consumption2.52.93.41.7-1.91.6
Bone: trabecular number3.96.27.12.7-2.62.2
Bone: trabecular spacing3.44.45.3-2.32.1-1.9
Bone: trabecular thickness0.80.91.11.1-1.00.8
Bone: trabecular tissue density0.20.20.30.6-0.50.4
Water consumed over 24 hours1.41.62.31.5-1.40.8
Number of responses in last shaping day0.50.50.80.6-0.60.9