Zfp395

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Liver gene expression Zfp395 0.02 0.02 3.7e-03 0.02 0.01 0 0.01 5.1e-03 5.6e-02 7.9e-02 4.2e-02
2 pVTA gene expression Zfp395 0.11 0.07 2.4e-03 0.02 0.06 0.03 0.03 4.5e-02 1.4e-03 1.4e-02 1.4e-02
3 Adipose gene expression Zfp395 0.11 0.07 5.3e-07 0.05 0.05 0.05 0.05 2.9e-06 3.8e-06 5.3e-06 5.0e-06
4 Adipose isoform ratio XM_039093334.1 0.03 0.02 2.3e-03 0.03 0.02 0.03 0.02 5.4e-04 5.5e-03 7.2e-04 1.5e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density0.50.81.21.0-1.0-0.21.1
Area under the delay curve3.84.18.4-2.51.2-0.2-2.9
BMI with tail0.61.94.7-2.20.50.3-1.5
BMI without tail0.51.02.40.6-1.5-1.1-0.2
Body weight0.83.69.1-3.01.51.5-0.7
Weight adjusted by age2.93.36.4-1.12.12.51.1
Bone surface0.20.30.60.7-0.2-0.10.8
Bone volume0.00.10.10.3-0.3-0.30.0
Breakpoint value in progressive ratio session1.21.33.5-0.8-0.4-0.9-1.9
Number of licking bursts0.40.51.0-0.7-0.7-0.4-1.0
Context. condit. distance diff. score3.74.57.11.3-2.7-2.6-1.6
Locomotion velocity, session 10.10.10.2-0.30.2-0.5-0.5
Locomotion distance, session 10.10.20.5-0.00.7-0.2-0.3
Locomotion velocity, session 20.40.51.0-0.50.8-0.3-1.0
Locomotion distance, session 20.10.20.60.30.80.00.3
Locomotion velocity, session 30.50.61.1-1.00.51.00.2
Locomotion distance, session 30.30.30.8-0.9-0.10.2-0.6
Stereotopy head waving bouts, day 31.01.22.20.30.51.51.5
Stereotopy head waving duration, day 31.62.03.6-0.81.61.91.0
Locomotion velocity, session 74.04.49.71.2-3.1-2.3-1.1
Locomotion distance, session 74.35.511.51.8-3.4-2.7-0.5
Stereotopy head waving bouts, day 71.51.72.4-1.41.61.5-0.0
Stereotopy head waving duration, day 72.63.15.1-1.82.02.30.4
Locomotion velocity, session 80.40.41.1-0.0-0.3-0.7-1.0
Locomotion distance, session 81.21.73.20.8-1.3-1.8-1.1
Degree of sensitization distance6.66.610.22.7-3.2-3.0-0.2
Degree of sensitization stereotypy1.11.21.9-1.41.40.8-0.7
Conditioned locomotion0.40.51.00.7-1.0-0.5-0.4
Cocaine response after cond. corrected1.21.32.50.0-1.0-1.3-1.6
Cocaine response after cond. not corrected1.21.32.2-0.1-0.9-1.4-1.5
Cocaine response before conditioning0.20.30.5-0.40.50.40.7
Saline control response0.10.10.3-0.00.50.20.3
Bone: connectivity density2.23.46.31.9-1.9-0.02.5
Bone: cortical apparent density0.20.30.5-0.4-0.6-0.3-0.7
Bone: cortical area1.32.05.1-1.30.9-0.6-2.3
Bone: cortical porosity1.82.03.0-1.71.71.4-0.4
Bone: cortical porosity1.61.73.3-1.41.81.2-0.5
Bone: cortical thickness1.83.07.1-2.00.9-0.3-2.7
Bone: cortical thickness4.35.013.3-1.2-0.2-2.3-3.6
Bone: cortical tissue density0.20.20.4-0.3-0.6-0.3-0.6
Condit. Reinf. active minus inactive responses0.60.61.4-0.50.91.20.3
Condit. Reinf. active-inactive response ratio0.30.30.80.20.30.90.6
Condit. Reinf. active responses0.40.50.9-0.60.90.90.1
Condit. Reinf. inactive responses0.10.10.2-0.40.30.10.2
Incentive salience index mean1.51.83.0-1.41.71.4-0.2
Condit. Reinf. lever presses1.52.03.4-1.81.80.9-0.6
Condit. Reinf. active minus inactive responses0.10.10.20.3-0.2-0.3-0.4
Condit. Reinf. active-inactive response ratio0.00.00.10.1-0.10.1-0.4
Condit. Reinf. active responses0.20.20.40.5-0.4-0.6-0.3
Condit. Reinf. inactive responses0.81.01.41.1-1.0-1.20.2
Condit. Reinf. lever presses0.50.61.30.00.90.71.1
Condit. Reinf. lever reinforcers received0.00.10.10.2-0.1-0.3-0.3
Conditioned reinforcement - actives4.74.78.93.0-2.1-2.01.0
Conditioned reinforcement - inactives1.92.13.21.8-1.3-0.61.7
Conditioned locomotion1.72.14.21.3-1.4-2.0-0.6
Patch foraging indifference point 0 sec0.40.71.0-0.31.00.81.0
Patch foraging indifference point AUC1.01.12.40.3-0.1-1.4-1.5
Delay disc. indifference point, 0s delay0.10.10.3-0.20.1-0.3-0.6
Delay disc. indifference point, 16s delay2.52.66.3-1.80.6-0.5-2.5
Delay disc. indifference point, 2s delay0.70.81.4-1.01.20.1-0.8
Delay disc. indifference point, 24s delay4.24.111.3-1.90.6-1.0-3.4
Delay disc. indifference point, 4s delay2.42.54.4-2.11.40.5-1.9
Delay disc. indifference point, 8s delay4.24.47.9-2.81.30.5-2.8
Indifference point function ln k0.71.02.0-0.80.91.40.7
Indifference point function log k0.71.02.0-0.80.91.40.7
Patch foraging total patch changes 0 sec0.50.81.5-0.61.20.90.8
Patch foraging total patch changes 12 sec0.10.20.2-0.40.4-0.5-0.3
Patch foraging total patch changes 18 sec0.40.51.50.6-0.2-1.2-0.4
Patch foraging total patch changes 24 sec0.30.31.2-0.31.10.3-0.1
Patch foraging total patch changes 6 sec0.00.00.0-0.1-0.0-0.10.0
Patch foraging time to switch 0 sec0.20.20.70.2-0.8-0.40.2
Patch foraging water rate 0 sec0.40.71.3-1.01.10.6-0.3
Patch foraging water rate 12 sec0.40.61.7-0.21.30.80.1
Patch foraging water rate 18 sec2.73.66.0-2.52.11.7-1.0
Patch foraging water rate 24 sec0.10.10.5-0.00.2-0.1-0.7
Patch foraging water rate 6 sec1.21.84.7-0.92.21.3-0.2
Seeking ratio, delayed vs. immediate footshock0.10.10.30.1-0.10.30.6
Distance traveled before self-admin0.20.20.40.50.70.10.5
Distance traveled after self-admin0.10.20.40.20.6-0.3-0.3
Extensor digitorum longus weight4.618.230.7-5.55.13.2-2.3
Bone: elastic displacement0.20.20.60.40.70.30.2
Bone: elastic work0.81.12.8-0.71.71.0-0.1
Bone: endosteal estimation0.00.10.10.40.3-0.10.2
Bone: endosteal perimeter0.20.51.11.00.2-0.30.8
Epididymis fat weight0.20.50.70.0-0.8-0.8-0.8
Delta time in closed arm before/after self-admin0.40.40.91.0-0.40.10.6
Delta time in open arm before/after self-admin0.20.20.7-0.1-0.8-0.2-0.1
Diff in mean of infusions in LGA sessions3.33.66.2-2.51.72.2-0.7
Delay discount exponential model param4.34.59.02.7-1.40.03.0
Extinction: sum of active levers before priming0.70.71.60.3-1.2-1.0-0.4
Active lever presses in extinction session 60.60.60.90.7-0.9-0.90.1
Bone: final force0.91.42.9-1.40.90.2-1.7
Bone: final moment0.81.21.7-1.31.20.5-1.2
Food consumed during 24 hour testing period0.40.51.1-0.01.00.50.8
Glucose0.50.81.9-0.3-0.4-1.0-1.4
Heart weight0.20.30.9-0.20.31.00.2
Delay discount hyperbolic model param4.24.57.82.7-1.6-0.22.8
Intermittent access intake day 1-15 change0.30.30.91.0-0.20.10.4
Intermittent access intake escalation0.20.20.90.9-0.1-0.10.1
Intermittent access intake escalation 20.20.20.40.60.10.40.3
Intermitt. access day 1 inactive lever presses1.31.42.41.1-1.40.31.5
Intermitt. access day 15 inactive lever presses1.41.53.50.20.21.61.9
Intermitt. access escalation Index0.70.71.50.5-0.6-1.2-0.7
Intermittent access day 1 total infusions0.60.61.70.5-0.5-1.3-0.5
Intermittent access day 15 total infusions0.91.02.01.4-0.8-1.1-0.4
Intermittent access terminal intake (last 3 days)0.70.71.61.3-0.4-1.0-0.5
Intermittent access total infusions1.82.03.41.4-1.3-1.8-0.9
Intermittent access day 1 locomotion0.30.40.6-0.3-0.6-0.7-0.6
Intermittent access day 15 total locomotion0.20.20.30.5-0.5-0.5-0.2
Intermittent access total locomotion0.20.20.5-0.1-0.5-0.4-0.7
Intermittent access standard deviation0.50.61.41.20.90.20.2
Left kidney weight1.43.88.0-1.91.82.80.6
Right kidney weight1.64.69.4-2.31.53.11.3
Cocaine induced anxiety0.70.81.5-0.31.21.10.6
Post-drug Anxiety1.11.22.8-0.2-0.41.41.7
Baseline Anxiety0.40.41.40.1-1.2-0.50.3
Tail length0.41.32.91.2-0.8-0.31.7
Length with tail0.41.62.6-1.11.21.61.0
Length without tail3.06.69.1-3.02.92.9-0.4
Times rat made contact with spout0.20.20.50.4-0.4-0.7-0.3
Lifetime Intake1.51.72.71.6-1.1-1.6-0.5
Liver weight, left2.03.25.0-2.12.21.6-0.7
Liver weight, right1.01.62.6-1.61.60.6-1.1
Locomotor activity3.45.49.1-2.13.02.80.4
Locomotor testing distance1.11.82.7-0.21.51.61.4
Locomotor testing rearing2.53.99.60.71.22.03.1
Locomotion in novel chamber0.20.30.9-0.90.10.2-0.5
Locomotion in novel chamber post-restriction0.40.51.2-0.50.7-0.4-1.1
Fecal boli incidents, locomotor time 10.80.92.2-0.81.50.5-0.7
Change in fecal boli incidents, locomotor task0.70.61.50.4-0.70.51.2
Time >=10cm from walls, locomotor time 10.80.82.00.0-0.01.11.4
Bouts of movement, locomotor time 10.10.10.20.10.5-0.1-0.4
Total resting periods, locomotor time 10.40.40.90.40.1-0.7-1.0
Rest time, locomotor task time 10.60.61.20.0-0.1-1.1-1.1
Distance moved, locomotor task time 10.20.30.80.3-0.30.30.9
Vertical activity count, locomotor time 10.91.01.6-0.41.21.01.0
Time >=10cm from walls, locomotor time 20.80.92.20.60.30.91.5
Bouts of movement, locomotor time 21.61.74.0-1.60.60.2-2.0
Total resting periods, locomotor time 21.92.14.6-1.80.60.1-2.2
Rest time, locomotor task time 21.92.26.1-1.30.7-0.8-2.5
Distance moved, locomotor task time 20.60.71.91.0-0.2-0.01.4
Vertical activity count, locomotor time 20.30.40.80.30.9-0.10.7
Light reinforcement 10.40.81.70.4-1.3-1.0-0.5
Light reinforcement 20.91.22.80.8-1.7-1.1-0.4
Bone: marrow area0.00.10.20.50.2-0.20.2
Bone: maximum diameter0.71.43.6-0.70.9-0.8-1.9
Bone: maximum force1.32.24.3-1.61.4-0.0-2.1
Bone: maximum moment1.11.92.8-1.51.70.3-1.6
Mean time between licks in bursts2.94.16.42.5-2.1-0.12.4
Mean num. licks in bursts0.30.40.91.00.3-0.20.7
Cd content in liver0.40.40.80.7-0.10.50.9
Co content in liver1.01.23.4-0.90.5-0.6-1.8
Cu content in liver0.20.30.4-0.60.50.70.1
Fe content in liver0.70.91.41.2-0.90.11.1
K content in liver0.70.71.30.5-1.1-1.0-0.4
Mg content in liver0.70.71.20.9-1.1-0.90.1
Mn content in liver1.41.62.61.2-1.5-1.6-0.4
Na content in liver5.05.28.9-2.53.02.40.4
Rb content in liver0.70.91.41.2-1.1-0.40.9
Se content in liver0.30.40.90.10.40.70.9
Sr content in liver1.41.22.21.5-0.9-0.41.3
Zn content in liver2.02.23.3-1.21.81.71.1
Bone: minimum diameter0.61.22.2-0.91.5-0.4-1.3
Time in familiar zone, hab. session 10.70.61.30.3-0.6-1.1-0.9
Time in novel zone, hab. session 10.90.91.4-1.21.01.1-0.5
Total zone transitions, hab. session 10.60.91.6-0.81.0-0.4-1.3
Total locomotion distance, hab. session 10.30.40.9-0.30.5-0.7-1.0
Locomotion velocity, hab. session 10.20.20.4-0.30.6-0.5-0.5
Time in familiar zone, hab. session 20.20.20.80.3-0.9-0.2-0.0
Time in novel zone, hab. session 20.20.20.5-0.10.7-0.4-0.4
Total zone transitions, hab. session 20.60.72.2-0.71.50.5-0.2
Total locomotion distance, hab. session 20.20.30.5-0.40.7-0.2-0.6
Locomotion velocity, hab. session 20.40.51.1-0.71.1-0.0-0.7
Novel to familiar place preference ratio0.40.41.00.60.2-1.0-0.5
Novelty place preference0.30.30.70.60.2-0.8-0.3
Time in novel zone, NPP test0.20.20.30.50.3-0.6-0.2
Total zone transitions, NPP test0.00.00.1-0.00.2-0.1-0.2
Total locomotion distance, NPP test0.71.01.81.3-1.1-0.70.7
Locomotion velocity, NPP test0.81.12.01.4-1.1-0.90.6
Intraocular pressure1.21.73.92.0-1.0-0.31.3
Delta distance traveled before/after self-admin0.20.20.4-0.60.4-0.0-0.6
Delta ambulatory time before/after self-admin0.30.30.7-0.40.6-0.2-0.8
Parametrial fat weight2.54.87.52.4-2.5-2.7-0.4
Pavlov. Cond. lever latency0.60.81.41.0-1.2-0.50.5
Pavlov. Cond. magazine entry latency0.50.61.2-0.90.71.10.2
Pavlov. Cond. change in total contacts2.42.65.4-1.92.30.8-0.9
Pavlov. Cond. index score1.52.03.7-1.91.51.3-0.3
Pavlov. Cond. latency score1.11.52.6-1.61.41.1-0.2
Pavlov. Cond. lever contacts1.01.11.8-1.31.31.0-0.1
Pavlov. Cond. magazine entry number1.21.52.21.5-1.4-1.40.0
Pavlov. Cond. intertrial magazine entries0.10.10.1-0.10.30.30.4
Pavlov. Cond. lever-magazine prob. diff.1.92.44.5-2.11.71.5-0.4
Pavlov. Cond. response bias1.72.03.3-1.81.51.5-0.2
Pavlov. Cond. lever latency1.82.43.71.1-1.9-1.9-1.1
Pavlov. Cond. magazine entry latency1.31.52.5-1.61.21.3-0.5
Pavlov. Cond. change in total contacts3.44.77.2-2.12.62.70.7
Pavlov. Cond. index score2.43.14.9-1.82.12.20.4
Pavlov. Cond. latency score2.43.05.1-1.71.92.30.6
Pavlov. Cond. lever contacts1.72.34.2-0.92.11.71.2
Pavlov. Cond. magazine entry number0.50.71.21.1-0.8-0.60.7
Pavlov. Cond. intertrial magazine entries5.77.413.63.7-3.0-2.11.6
Pavlov. Cond. lever-magazine prob. diff.2.22.94.2-1.82.02.00.3
Pavlov. Cond. response bias1.82.54.9-1.52.21.70.3
Time in closed arm before self-admin1.61.93.9-2.00.91.60.3
Time in closed arm after self-admin0.50.51.0-0.80.51.00.4
Time in open arm before self-admin0.60.61.81.4-0.1-0.80.1
Time in open arm after self-admin0.50.51.10.8-1.1-0.30.5
Bone: periosteal estimation0.20.51.2-0.30.6-0.5-1.1
Bone: periosteal perimeter0.10.20.3-0.00.4-0.5-0.6
Bone: post-yield work3.44.710.7-0.2-0.6-2.8-3.3
Progressive ratio test 1 active lever presses1.11.12.40.4-0.7-1.5-1.2
Progressive ratio test 1 breakpoint1.21.32.50.4-0.8-1.6-1.3
Progressive ratio test 1 inactive lever presses0.80.81.51.0-1.2-0.50.8
Progressive ratio test 2 active lever presses1.41.53.31.8-1.0-1.30.2
Progressive ratio test 2 breakpoint0.91.02.31.5-0.8-1.00.3
Progressive ratio test 2 inactive lever presses1.21.42.91.7-0.9-0.51.3
Incentive Sensitization - Responses1.31.32.81.6-0.00.01.7
Incentive Sensitization - Breakpoint1.51.53.31.6-0.10.11.8
Sum of active levers in priming session hrs 5-61.41.32.30.9-1.5-1.5-0.2
Progressive ratio1.01.21.7-1.21.11.30.6
Food seeking constrained by brief footshock0.60.81.50.4-1.2-1.0-0.7
Seeking ratio, punishment vs. effort0.80.91.30.8-1.0-1.1-0.9
Retroperitoneal fat weight0.72.44.90.9-1.4-2.2-1.3
Reaction time number correct0.30.50.80.9-0.6-0.10.8
Reaction time mean minus median0.71.02.0-1.00.91.40.3
Reaction time mean minus median AUC0.50.71.5-0.70.41.20.8
Reaction time num false alarms0.40.51.1-1.00.40.80.4
Reaction time num false alarms AUC0.40.51.1-1.10.60.70.2
Reaction time trials correct on left0.30.50.80.9-0.6-0.10.8
Reaction time trials on left0.40.61.01.0-0.7-0.10.9
Reaction time mean0.71.02.20.20.31.41.5
Reaction time mean AUC1.21.63.20.00.51.81.7
Median of all reaction times0.91.23.00.7-0.01.21.7
Reaction time omissions1.72.44.01.8-1.50.12.0
Reaction time false alarm rate0.50.72.0-1.40.60.5-0.4
Reaction time premature initiation rate0.40.51.0-0.80.70.3-1.0
Reaction time premature initiations0.10.10.3-0.20.30.1-0.5
Std. dev. reaction times0.20.30.9-0.20.31.00.5
Reaction time trials completed0.40.61.01.0-0.7-0.10.9
Reaction time trials AUC0.50.71.31.2-0.7-0.11.0
Run reversals in cocaine runway, females0.80.81.40.9-1.2-1.00.2
Run reversals in cocaine runway, males2.82.75.1-1.82.30.7-1.4
Latency to leave start box in cocaine runway0.50.61.11.10.30.21.0
Latency to leave start box in cocaine runway, F0.40.51.10.21.00.60.6
Latency to leave start box in cocaine runway, M1.61.53.11.4-0.90.31.8
Std. dev. time between licks in bursts1.01.22.21.4-0.60.31.5
Total sessions with >9 infusions1.01.11.91.3-1.4-0.30.8
Short access day 1 total inactive lever presses0.30.30.50.7-0.7-0.5-0.1
Short access day 10 total inactive lever presses0.70.81.60.8-1.3-0.60.6
Short access day 1 total infusions1.61.83.71.9-1.4-1.00.5
Short access day 10 total infusions1.01.12.30.00.4-1.3-1.5
Short access total infusions0.30.40.70.8-0.4-0.7-0.3
Short access day 1 locomotion0.30.30.50.40.30.70.7
Short access day 10 total locomotion0.20.30.7-0.8-0.30.60.0
Short access total locomotion0.20.20.4-0.4-0.30.60.4
One hour access (0.3 mA shock)1.11.32.60.8-0.5-1.6-1.3
Compulsive drug intake0.70.71.3-0.4-0.5-1.1-1.1
One hour access (shock baseline)0.60.71.71.3-0.4-0.8-0.3
Social response proportion1.51.63.21.8-1.5-0.70.7
Social responses2.02.65.02.2-1.9-1.00.8
Social time1.31.74.80.40.21.42.2
Soleus weight0.30.71.4-1.20.40.0-1.2
Bone: stiffness0.50.81.7-1.30.70.1-1.1
Tibialis anterior weight4.515.527.5-5.24.53.5-1.7
Time to tail flick, vehicle, before self-admin0.60.61.8-1.30.40.6-0.0
Time to tail flick, vehicle, after self-admin0.70.81.5-1.20.70.6-0.9
Time to tail flick, test, before self-admin0.20.20.8-0.30.10.20.9
Time to tail flick, test, after self-admin4.34.58.02.4-2.8-1.31.6
Delta time to tail flick, vehicle, before/after SA0.20.20.60.8-0.2-0.2-0.2
Delta time to tail flick, test, before/after SA4.03.66.12.4-2.5-1.40.9
Tibia length1.44.07.8-1.21.42.82.2
Ambulatory time before self-admin0.10.10.20.20.5-0.3-0.2
Ambulatory time after self-admin0.60.71.6-0.61.30.1-0.9
Bone: tissue strength0.40.40.80.60.20.60.9
Total heroin consumption0.70.81.8-0.91.30.4-0.7
Bone: trabecular number0.81.31.91.3-1.4-0.21.2
Bone: trabecular spacing1.62.13.6-1.91.40.0-1.8
Bone: trabecular thickness0.20.20.5-0.70.20.2-0.6
Bone: trabecular tissue density1.42.04.1-2.01.31.3-0.8
Water consumed over 24 hours0.60.81.4-1.11.20.7-0.1
Number of responses in last shaping day0.50.51.3-0.51.10.70.1