Zfp395

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 pVTA gene expression Zfp395 0.05 0.03 1.1e-03 0.01 0.03 0.02 0.01 1.0e-01 1.2e-03 1.9e-02 3.3e-02
2 Adipose isoform ratio XM_039093334.2 0.03 0.02 4.5e-03 0.02 0.01 0.02 0.02 1.1e-03 2.3e-02 3.0e-03 4.8e-03
3 Adipose gene expression Zfp395 0.09 0.05 1.4e-06 0.05 0.04 0.05 0.05 6.9e-06 1.5e-05 5.5e-06 6.2e-06

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
Bone: apparent density0.71.22.8-1.7-0.70.6
Area under the delay curve3.84.49.41.93.1-0.1
BMI with tail0.10.40.60.80.7-0.4
BMI without tail0.00.10.1-0.4-0.20.4
Body weight0.41.83.11.50.1-1.7
Weight adjusted by age2.23.36.51.4-1.2-2.6
Bone surface0.30.61.4-1.2-0.60.3
Bone volume0.30.51.1-1.10.20.7
Breakpoint value in progressive ratio session0.91.12.80.61.70.2
Number of licking bursts0.20.41.00.11.00.4
Context. condit. distance diff. score2.73.36.3-1.41.32.5
Locomotion velocity, session 10.10.10.1-0.10.30.2
Locomotion distance, session 10.00.00.0-0.10.0-0.0
Locomotion velocity, session 20.30.30.70.30.80.3
Locomotion distance, session 20.10.10.2-0.4-0.5-0.0
Locomotion velocity, session 30.60.61.00.9-0.3-1.0
Locomotion distance, session 30.10.10.20.40.4-0.1
Stereotopy head waving bouts, day 31.11.32.10.1-1.4-1.3
Stereotopy head waving duration, day 31.21.42.41.1-0.7-1.6
Locomotion velocity, session 73.03.35.7-1.71.22.4
Locomotion distance, session 73.84.88.1-2.40.72.8
Stereotopy head waving bouts, day 71.41.52.71.3-0.4-1.6
Stereotopy head waving duration, day 72.63.25.71.9-0.6-2.4
Locomotion velocity, session 80.50.61.10.21.00.8
Locomotion distance, session 81.01.52.9-1.10.71.7
Degree of sensitization distance5.65.79.4-2.70.63.1
Degree of sensitization stereotypy1.01.12.11.50.5-0.9
Conditioned locomotion0.60.71.1-0.80.61.1
Cocaine response after cond. corrected1.51.82.7-0.21.61.6
Cocaine response after cond. not corrected1.31.52.4-0.31.41.6
Cocaine response before conditioning0.50.61.3-0.2-1.1-0.7
Saline control response0.40.61.00.2-0.9-1.0
Bone: connectivity density2.64.16.9-2.6-2.30.0
Bone: cortical apparent density0.20.20.50.40.70.1
Bone: cortical area1.62.45.81.22.40.4
Bone: cortical porosity1.11.11.91.40.9-0.9
Bone: cortical porosity1.21.32.11.50.7-1.2
Bone: cortical thickness2.03.27.21.62.70.3
Bone: cortical thickness4.75.611.71.03.42.0
Bone: cortical tissue density0.10.20.40.40.60.2
Condit. Reinf. active minus inactive responses0.30.40.80.6-0.2-0.9
Condit. Reinf. active-inactive response ratio0.10.10.20.2-0.4-0.5
Condit. Reinf. active responses0.20.30.60.4-0.1-0.8
Condit. Reinf. inactive responses0.10.10.3-0.2-0.2-0.5
Incentive salience index mean1.01.21.81.30.1-1.4
Condit. Reinf. lever presses0.81.11.91.40.4-1.2
Condit. Reinf. active minus inactive responses0.20.20.4-0.40.10.6
Condit. Reinf. active-inactive response ratio0.10.10.1-0.0-0.20.4
Condit. Reinf. active responses0.30.40.7-0.70.10.8
Condit. Reinf. inactive responses0.81.01.8-1.40.11.1
Condit. Reinf. lever presses0.50.71.20.1-1.1-0.9
Condit. Reinf. lever reinforcers received0.10.20.3-0.40.10.5
Conditioned reinforcement - actives2.13.54.2-2.0-1.62.0
Conditioned reinforcement - inactives1.82.64.2-1.8-2.10.6
Conditioned locomotion1.21.63.9-0.40.82.0
Patch foraging indifference point 0 sec0.50.91.4-0.4-1.2-1.0
Patch foraging indifference point AUC0.71.11.80.51.11.3
Delay disc. indifference point, 0s delay0.10.10.2-0.20.4-0.0
Delay disc. indifference point, 16s delay2.93.27.41.32.70.7
Delay disc. indifference point, 2s delay0.40.40.60.70.8-0.3
Delay disc. indifference point, 24s delay4.65.112.11.43.51.2
Delay disc. indifference point, 4s delay2.62.74.22.11.8-0.9
Delay disc. indifference point, 8s delay3.44.08.11.92.8-0.4
Indifference point function ln k0.40.81.80.1-0.7-1.3
Indifference point function log k0.40.81.80.1-0.7-1.3
Patch foraging total patch changes 0 sec0.50.91.60.0-1.0-1.2
Patch foraging total patch changes 12 sec0.00.00.10.30.2-0.0
Patch foraging total patch changes 18 sec0.10.20.6-0.20.20.8
Patch foraging total patch changes 24 sec0.10.10.20.5-0.0-0.3
Patch foraging total patch changes 6 sec0.00.00.00.00.0-0.0
Patch foraging time to switch 0 sec0.20.40.7-0.80.50.4
Patch foraging water rate 0 sec0.30.71.11.1-0.3-0.9
Patch foraging water rate 12 sec0.40.81.30.9-0.6-1.2
Patch foraging water rate 18 sec2.03.05.82.40.8-1.6
Patch foraging water rate 24 sec0.10.20.40.60.4-0.0
Patch foraging water rate 6 sec1.11.62.71.6-0.3-1.4
Seeking ratio, delayed vs. immediate footshock0.20.30.4-0.6-0.4-0.5
Distance traveled before self-admin0.30.40.60.5-0.7-0.7
Distance traveled after self-admin0.60.81.41.20.9-0.4
Extensor digitorum longus weight4.718.738.16.22.8-3.2
Bone: elastic displacement0.10.10.1-0.2-0.3-0.3
Bone: elastic work0.30.40.80.50.4-0.9
Bone: endosteal estimation0.00.10.1-0.4-0.20.2
Bone: endosteal perimeter0.20.30.6-0.8-0.60.1
Epididymis fat weight0.10.40.9-0.00.90.5
Delta time in closed arm before/after self-admin0.70.61.5-1.2-0.30.5
Delta time in open arm before/after self-admin0.20.20.30.50.2-0.5
Diff in mean of infusions in LGA sessions2.53.05.91.60.7-2.4
Delay discount exponential model param4.65.19.9-2.3-3.20.2
Extinction: sum of active levers before priming0.00.00.1-0.30.2-0.0
Active lever presses in extinction session 60.60.61.3-0.40.51.1
Bone: final force0.81.32.81.11.7-0.0
Bone: final moment0.60.91.51.01.2-0.4
Food consumed during 24 hour testing period0.30.40.50.6-0.7-0.7
Glucose0.61.01.50.91.20.8
Heart weight0.10.20.4-0.6-0.3-0.2
Delay discount hyperbolic model param3.94.38.1-2.2-2.90.3
Intermittent access intake day 1-15 change0.40.81.4-1.2-0.50.9
Intermittent access intake escalation0.20.40.7-0.9-0.40.6
Intermittent access intake escalation 20.00.10.2-0.4-0.10.1
Intermitt. access day 1 inactive lever presses0.52.03.7-1.5-1.90.2
Intermitt. access day 15 inactive lever presses0.71.53.0-0.1-1.7-1.2
Intermitt. access escalation Index0.20.20.4-0.60.10.6
Intermittent access day 1 total infusions0.30.61.6-0.2-0.21.3
Intermittent access day 15 total infusions0.91.32.2-1.2-0.41.5
Intermittent access terminal intake (last 3 days)0.70.92.0-0.8-0.21.4
Intermittent access total infusions1.72.04.2-1.3-0.12.0
Intermittent access day 1 locomotion0.00.00.1-0.00.20.3
Intermittent access day 15 total locomotion0.10.10.3-0.0-0.10.5
Intermittent access total locomotion0.10.10.1-0.2-0.00.4
Intermittent access standard deviation0.10.20.30.60.30.3
Left kidney weight0.52.45.01.2-0.9-2.2
Right kidney weight1.04.810.51.0-1.7-3.2
Cocaine induced anxiety0.60.91.70.90.3-1.3
Post-drug Anxiety1.21.32.6-0.2-1.1-1.6
Baseline Anxiety0.40.40.9-0.9-0.70.1
Tail length0.51.94.1-0.8-2.0-1.0
Length with tail0.41.94.20.3-1.2-2.1
Length without tail1.13.65.42.30.4-2.3
Times rat made contact with spout0.10.10.2-0.20.30.4
Lifetime Intake1.41.73.8-1.2-0.21.9
Liver weight, left1.83.05.31.7-1.0-2.3
Liver weight, right0.91.63.61.91.0-0.6
Locomotor activity2.64.18.71.9-0.5-2.9
Locomotor testing distance0.91.72.9-0.4-1.4-1.7
Locomotor testing rearing2.44.99.2-0.9-3.0-2.2
Locomotion in novel chamber0.00.00.1-0.10.3-0.0
Locomotion in novel chamber post-restriction0.71.22.10.91.40.7
Fecal boli incidents, locomotor time 10.70.92.11.40.8-0.3
Change in fecal boli incidents, locomotor task1.01.02.3-0.6-1.5-0.5
Time >=10cm from walls, locomotor time 11.11.11.7-0.5-1.2-1.3
Bouts of movement, locomotor time 10.40.40.90.60.90.2
Total resting periods, locomotor time 10.80.91.80.51.30.8
Rest time, locomotor task time 10.91.11.70.11.31.2
Distance moved, locomotor task time 10.40.51.0-0.7-1.0-0.4
Vertical activity count, locomotor time 10.51.21.80.5-1.2-1.3
Time >=10cm from walls, locomotor time 20.50.81.5-0.1-1.2-0.9
Bouts of movement, locomotor time 21.32.04.01.42.0-0.3
Total resting periods, locomotor time 21.42.54.51.72.1-0.3
Rest time, locomotor task time 23.14.07.32.02.70.8
Distance moved, locomotor task time 21.01.22.1-1.2-1.5-0.2
Vertical activity count, locomotor time 20.20.30.8-0.2-0.9-0.4
Light reinforcement 10.10.20.4-0.70.30.4
Light reinforcement 20.40.61.0-0.60.61.0
Bone: marrow area0.00.10.2-0.4-0.10.3
Bone: maximum diameter1.12.04.61.12.10.7
Bone: maximum force1.52.65.41.52.30.1
Bone: maximum moment1.11.93.31.51.8-0.3
Mean time between licks in bursts1.84.37.2-2.7-2.40.3
Mean num. licks in bursts0.10.20.5-0.2-0.70.0
Cd content in liver1.82.04.00.9-1.1-2.0
Co content in liver1.41.62.71.61.4-0.1
Cu content in liver0.40.50.70.90.7-0.4
Fe content in liver1.01.22.2-1.5-1.1-0.1
K content in liver0.60.61.4-1.2-0.10.6
Mg content in liver1.31.32.7-1.6-0.51.0
Mn content in liver1.11.22.2-1.5-0.41.1
Na content in liver3.74.06.42.30.2-2.5
Rb content in liver1.01.12.5-0.8-1.6-0.4
Se content in liver1.21.42.8-0.8-1.7-0.9
Sr content in liver0.70.60.8-0.9-0.7-0.7
Zn content in liver0.40.40.9-0.9-0.6-0.1
Bone: minimum diameter0.51.01.81.11.3-0.0
Time in familiar zone, hab. session 10.80.71.3-0.40.91.1
Time in novel zone, hab. session 11.01.02.01.40.4-0.9
Total zone transitions, hab. session 10.50.61.20.81.10.3
Total locomotion distance, hab. session 10.30.40.70.10.80.7
Locomotion velocity, hab. session 10.10.10.1-0.20.30.4
Time in familiar zone, hab. session 20.10.10.2-0.40.10.5
Time in novel zone, hab. session 20.10.10.10.30.30.1
Total zone transitions, hab. session 20.30.40.90.90.1-0.6
Total locomotion distance, hab. session 20.10.10.20.30.50.3
Locomotion velocity, hab. session 20.20.30.40.60.60.1
Novel to familiar place preference ratio0.20.30.6-0.20.40.8
Novelty place preference0.10.20.3-0.30.10.6
Time in novel zone, NPP test0.00.00.1-0.20.00.3
Total zone transitions, NPP test0.00.10.1-0.30.10.2
Total locomotion distance, NPP test1.31.83.8-2.0-0.81.0
Locomotion velocity, NPP test1.31.83.6-1.9-0.71.2
Intraocular pressure1.52.13.2-1.8-1.80.3
Delta distance traveled before/after self-admin0.80.81.51.01.2-0.2
Delta ambulatory time before/after self-admin0.91.12.11.01.40.1
Parametrial fat weight1.33.05.2-2.3-0.12.0
Pavlov. Cond. lever latency0.50.61.1-1.1-0.40.7
Pavlov. Cond. magazine entry latency0.40.51.00.5-0.4-1.0
Pavlov. Cond. change in total contacts1.92.04.42.10.9-1.0
Pavlov. Cond. index score1.31.62.51.60.3-1.5
Pavlov. Cond. latency score0.91.21.81.30.2-1.3
Pavlov. Cond. lever contacts0.50.71.11.10.3-0.9
Pavlov. Cond. magazine entry number1.21.52.4-1.5-0.11.5
Pavlov. Cond. intertrial magazine entries0.10.20.3-0.2-0.5-0.4
Pavlov. Cond. lever-magazine prob. diff.1.51.93.11.70.3-1.5
Pavlov. Cond. response bias1.11.32.41.50.3-1.2
Pavlov. Cond. lever latency1.72.34.0-1.21.22.0
Pavlov. Cond. magazine entry latency0.70.81.31.10.5-0.9
Pavlov. Cond. change in total contacts2.43.96.42.1-0.9-2.5
Pavlov. Cond. index score1.82.44.21.6-0.7-2.1
Pavlov. Cond. latency score1.92.54.71.4-0.9-2.2
Pavlov. Cond. lever contacts1.62.23.61.2-1.2-1.9
Pavlov. Cond. magazine entry number0.20.30.5-0.7-0.50.3
Pavlov. Cond. intertrial magazine entries4.36.513.4-3.7-1.61.9
Pavlov. Cond. lever-magazine prob. diff.1.62.13.51.6-0.4-1.9
Pavlov. Cond. response bias1.31.82.91.5-0.5-1.7
Time in closed arm before self-admin0.71.01.60.8-0.8-1.3
Time in closed arm after self-admin0.20.20.3-0.4-0.5-0.3
Time in open arm before self-admin0.50.50.7-0.90.20.8
Time in open arm after self-admin0.10.10.2-0.3-0.4-0.3
Bone: periosteal estimation0.30.71.70.41.30.4
Bone: periosteal perimeter0.10.20.60.00.70.2
Bone: post-yield work5.98.715.90.64.03.1
Progressive ratio test 1 active lever presses0.81.02.8-0.20.31.7
Progressive ratio test 1 breakpoint0.80.92.6-0.10.41.6
Progressive ratio test 1 inactive lever presses1.21.72.3-1.5-1.50.7
Progressive ratio test 2 active lever presses0.30.40.8-0.3-0.90.6
Progressive ratio test 2 breakpoint0.30.30.8-0.1-0.90.4
Progressive ratio test 2 inactive lever presses1.32.24.2-1.3-2.10.8
Incentive Sensitization - Responses0.91.33.00.1-1.7-0.9
Incentive Sensitization - Breakpoint1.11.43.20.0-1.8-0.9
Sum of active levers in priming session hrs 5-60.30.30.4-0.70.30.5
Progressive ratio0.71.01.81.1-0.1-1.3
Food seeking constrained by brief footshock0.30.40.7-0.20.70.8
Seeking ratio, punishment vs. effort0.50.71.5-0.50.71.2
Retroperitoneal fat weight0.31.11.8-1.40.11.2
Reaction time number correct0.20.30.6-0.6-0.80.1
Reaction time mean minus median0.30.81.80.5-0.7-1.3
Reaction time mean minus median AUC0.30.81.30.1-1.0-1.1
Reaction time num false alarms0.30.41.30.20.2-1.1
Reaction time num false alarms AUC0.40.61.20.60.4-1.1
Reaction time trials correct on left0.20.30.6-0.6-0.80.1
Reaction time trials on left0.20.40.8-0.7-0.90.1
Reaction time mean0.50.81.60.0-1.2-1.0
Reaction time mean AUC0.81.21.90.2-1.4-1.3
Median of all reaction times0.50.71.6-0.1-1.3-0.8
Reaction time omissions1.62.34.0-2.0-1.70.3
Reaction time false alarm rate0.40.60.70.70.8-0.8
Reaction time premature initiation rate0.50.61.21.10.8-0.3
Reaction time premature initiations0.10.20.40.70.5-0.0
Std. dev. reaction times0.20.40.60.1-0.8-0.7
Reaction time trials completed0.20.40.8-0.7-0.90.1
Reaction time trials AUC0.30.51.0-0.7-1.00.1
Run reversals in cocaine runway, females0.70.71.3-0.90.41.1
Run reversals in cocaine runway, males3.43.47.62.81.2-1.0
Latency to leave start box in cocaine runway0.40.51.2-0.2-1.10.4
Latency to leave start box in cocaine runway, F0.30.40.60.8-0.6-0.4
Latency to leave start box in cocaine runway, M1.31.22.2-1.1-1.50.4
Std. dev. time between licks in bursts1.82.43.9-2.0-1.8-0.1
Total sessions with >9 infusions0.50.60.7-0.7-0.80.7
Short access day 1 total inactive lever presses0.30.40.60.70.30.8
Short access day 10 total inactive lever presses0.10.20.3-0.6-0.30.5
Short access day 1 total infusions0.91.33.0-0.8-0.21.7
Short access day 10 total infusions0.20.30.40.50.20.7
Short access total infusions0.30.31.0-0.10.01.0
Short access day 1 locomotion0.10.10.20.4-0.4-0.2
Short access day 10 total locomotion0.10.20.6-0.0-0.4-0.7
Short access total locomotion0.20.20.40.4-0.4-0.7
One hour access (0.3 mA shock)1.41.74.1-0.60.72.0
Compulsive drug intake0.60.71.2-1.10.30.8
One hour access (shock baseline)0.40.61.6-0.4-0.01.3
Social response proportion1.01.11.7-1.3-1.00.8
Social responses2.12.85.7-2.4-1.21.1
Social time2.02.75.8-0.7-2.4-1.4
Soleus weight0.41.32.41.21.50.3
Bone: stiffness0.71.11.71.31.2-0.4
Tibialis anterior weight4.013.626.95.22.0-3.1
Time to tail flick, vehicle, before self-admin0.10.10.20.40.4-0.2
Time to tail flick, vehicle, after self-admin0.60.81.41.20.8-0.6
Time to tail flick, test, before self-admin0.50.50.9-1.0-0.70.3
Time to tail flick, test, after self-admin4.04.17.0-2.7-1.71.5
Delta time to tail flick, vehicle, before/after SA0.00.00.0-0.1-0.20.1
Delta time to tail flick, test, before/after SA1.71.82.8-1.7-1.21.1
Tibia length2.05.59.00.0-2.7-3.0
Ambulatory time before self-admin0.10.10.30.5-0.3-0.3
Ambulatory time after self-admin1.61.93.71.91.2-0.8
Bone: tissue strength0.10.10.2-0.3-0.5-0.0
Total heroin consumption1.31.53.01.71.0-0.7
Bone: trabecular number1.21.94.0-2.0-1.30.3
Bone: trabecular spacing1.92.54.32.11.8-0.2
Bone: trabecular thickness0.10.10.30.00.6-0.0
Bone: trabecular tissue density1.62.44.32.10.7-1.5
Water consumed over 24 hours0.60.71.41.20.2-0.9
Number of responses in last shaping day1.21.32.41.61.1-0.4