Tmem150b

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression Tmem150b 0.06 0.04 5.4e-07 0.04 0.04 0.03 0.04 2.2e-05 1.8e-05 1.2e-04 1.3e-05
2 Adipose alternative TSS XM_039111106.2 0.03 0.02 3.6e-03 0.01 0.02 0.01 0.01 1.6e-02 3.9e-03 1.8e-02 1.7e-02
3 pVTA alternative TSS NM_001107476.1 0.05 0.04 7.4e-03 0 0.01 -0 0 1.1e-01 8.7e-02 8.1e-01 2.7e-01
4 Brain mRNA stability Tmem150b 0.06 0.06 3.7e-03 0.02 0.02 0.01 0.02 2.8e-03 3.3e-03 2.5e-02 6.7e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density0.10.10.20.30.3-0.40.4
Area under the delay curve0.30.40.4-0.6-0.60.6-0.5
BMI with tail0.61.92.2-1.4-1.31.4-1.5
BMI without tail0.10.20.30.50.6-0.3-0.0
Body weight1.15.06.52.42.6-2.21.6
Weight adjusted by age0.60.91.50.80.7-1.01.2
Bone surface3.15.66.32.52.5-2.42.1
Bone volume2.44.44.82.12.2-2.11.9
Breakpoint value in progressive ratio session0.40.50.5-0.7-0.70.7-0.6
Number of licking bursts0.00.10.1-0.3-0.30.3-0.2
Context. condit. distance diff. score0.10.10.3-0.4-0.50.3-0.1
Locomotion velocity, session 10.40.51.0-0.4-0.9-0.11.0
Locomotion distance, session 12.32.85.01.51.1-1.72.2
Locomotion velocity, session 20.20.20.5-0.5-0.70.20.4
Locomotion distance, session 21.82.53.31.51.3-1.61.8
Locomotion velocity, session 30.00.10.1-0.3-0.30.2-0.0
Locomotion distance, session 30.20.20.60.30.1-0.40.8
Stereotopy head waving bouts, day 30.10.10.2-0.3-0.30.4-0.4
Stereotopy head waving duration, day 30.10.10.2-0.3-0.20.4-0.5
Locomotion velocity, session 70.00.10.20.1-0.0-0.20.4
Locomotion distance, session 70.00.10.2-0.1-0.3-0.10.4
Stereotopy head waving bouts, day 70.10.20.30.50.5-0.40.2
Stereotopy head waving duration, day 70.10.20.30.40.5-0.40.2
Locomotion velocity, session 80.10.10.2-0.2-0.50.00.4
Locomotion distance, session 80.10.20.50.30.0-0.50.7
Degree of sensitization distance0.00.00.00.0-0.0-0.00.0
Degree of sensitization stereotypy0.00.00.10.20.3-0.1-0.1
Conditioned locomotion0.10.10.20.0-0.1-0.20.5
Cocaine response after cond. corrected1.72.03.5-1.2-0.91.5-1.9
Cocaine response after cond. not corrected0.10.10.30.30.6-0.2-0.3
Cocaine response before conditioning7.69.19.73.12.8-3.13.1
Saline control response0.10.20.6-0.2-0.3-0.20.8
Bone: connectivity density0.00.00.1-0.3-0.20.2-0.2
Bone: cortical apparent density0.10.10.40.0-0.1-0.20.6
Bone: cortical area0.91.31.41.21.2-1.21.0
Bone: cortical porosity0.60.60.9-0.8-0.60.8-0.9
Bone: cortical porosity0.20.20.5-0.3-0.10.4-0.7
Bone: cortical thickness0.30.60.8-0.8-0.90.7-0.5
Bone: cortical thickness0.10.10.30.20.2-0.40.6
Bone: cortical tissue density0.10.10.3-0.0-0.1-0.20.6
Condit. Reinf. active minus inactive responses0.20.20.3-0.5-0.40.5-0.5
Condit. Reinf. active-inactive response ratio1.81.92.0-1.4-1.31.4-1.4
Condit. Reinf. active responses0.10.10.10.30.3-0.30.3
Condit. Reinf. inactive responses3.24.04.22.01.8-2.12.0
Incentive salience index mean0.10.10.10.20.3-0.30.2
Condit. Reinf. lever presses0.81.11.21.01.0-1.11.0
Condit. Reinf. active minus inactive responses4.05.15.52.32.2-2.32.2
Condit. Reinf. active-inactive response ratio5.96.87.82.82.8-2.72.2
Condit. Reinf. active responses3.14.45.02.11.9-2.22.2
Condit. Reinf. inactive responses0.00.00.10.0-0.2-0.10.4
Condit. Reinf. lever presses0.60.81.41.11.2-0.80.3
Condit. Reinf. lever reinforcers received4.05.66.42.42.1-2.52.5
Conditioned reinforcement - actives0.20.30.50.60.7-0.50.2
Conditioned reinforcement - inactives2.33.43.71.91.8-1.91.8
Conditioned locomotion0.10.10.20.40.5-0.30.1
Patch foraging indifference point 0 sec0.30.61.0-0.9-1.00.7-0.4
Patch foraging indifference point AUC0.50.80.9-0.9-0.90.9-0.8
Delay disc. indifference point, 0s delay0.10.10.3-0.3-0.4-0.10.6
Delay disc. indifference point, 16s delay0.80.92.0-0.6-0.51.0-1.4
Delay disc. indifference point, 2s delay0.50.50.8-0.9-0.90.7-0.3
Delay disc. indifference point, 24s delay0.70.81.3-0.7-0.70.9-1.1
Delay disc. indifference point, 4s delay0.10.10.10.30.3-0.20.2
Delay disc. indifference point, 8s delay0.10.10.1-0.3-0.40.3-0.1
Indifference point function ln k4.68.09.02.82.6-2.93.0
Indifference point function log k4.68.09.02.82.6-2.93.0
Patch foraging total patch changes 0 sec0.30.61.0-0.9-1.00.7-0.3
Patch foraging total patch changes 12 sec0.30.30.4-0.5-0.50.6-0.7
Patch foraging total patch changes 18 sec0.60.81.0-1.0-1.00.9-0.7
Patch foraging total patch changes 24 sec0.00.10.20.20.30.0-0.4
Patch foraging total patch changes 6 sec0.91.41.5-1.2-1.21.2-1.1
Patch foraging time to switch 0 sec2.14.39.1-1.5-1.12.1-3.0
Patch foraging water rate 0 sec0.51.02.20.70.5-1.01.5
Patch foraging water rate 12 sec1.73.66.61.61.2-1.92.6
Patch foraging water rate 18 sec0.91.42.80.90.7-1.21.7
Patch foraging water rate 24 sec0.91.22.01.00.8-1.21.4
Patch foraging water rate 6 sec6.08.79.33.13.0-3.02.8
Seeking ratio, delayed vs. immediate footshock0.20.30.9-0.1-0.3-0.30.9
Distance traveled before self-admin2.12.86.61.10.8-1.72.6
Distance traveled after self-admin0.40.51.1-0.8-1.00.40.4
Extensor digitorum longus weight0.20.91.41.11.2-0.90.5
Bone: elastic displacement0.40.40.7-0.7-0.90.6-0.3
Bone: elastic work0.50.60.90.70.6-0.81.0
Bone: endosteal estimation3.16.88.12.82.9-2.62.1
Bone: endosteal perimeter2.04.24.72.22.2-2.11.7
Epididymis fat weight0.10.30.90.20.50.2-0.9
Delta time in closed arm before/after self-admin0.10.10.1-0.2-0.30.3-0.2
Delta time in open arm before/after self-admin1.71.72.31.21.1-1.41.5
Diff in mean of infusions in LGA sessions0.10.20.6-0.0-0.2-0.20.8
Delay discount exponential model param0.20.20.30.50.5-0.50.4
Extinction: sum of active levers before priming0.10.10.2-0.3-0.40.2-0.1
Active lever presses in extinction session 60.30.31.0-0.10.20.3-1.0
Bone: final force2.43.94.12.02.0-2.01.8
Bone: final moment3.04.85.12.22.2-2.32.1
Food consumed during 24 hour testing period1.82.52.71.61.6-1.61.5
Glucose1.72.73.6-1.8-1.91.6-1.2
Heart weight1.42.23.01.61.7-1.41.0
Delay discount hyperbolic model param0.30.30.40.60.6-0.60.4
Intermittent access intake day 1-15 change0.51.01.21.11.1-1.00.9
Intermittent access intake escalation0.81.72.01.41.4-1.31.0
Intermittent access intake escalation 20.20.20.50.30.2-0.50.7
Intermitt. access day 1 inactive lever presses0.52.12.81.61.7-1.40.9
Intermitt. access day 15 inactive lever presses1.83.64.82.12.2-1.91.2
Intermitt. access escalation Index0.40.50.6-0.7-0.70.7-0.7
Intermittent access day 1 total infusions0.40.60.90.90.9-0.80.5
Intermittent access day 15 total infusions0.91.42.01.31.4-1.10.7
Intermittent access terminal intake (last 3 days)0.91.21.61.21.3-1.10.8
Intermittent access total infusions1.51.82.31.51.5-1.30.9
Intermittent access day 1 locomotion1.21.51.81.31.3-1.21.0
Intermittent access day 15 total locomotion1.12.13.01.31.2-1.51.7
Intermittent access total locomotion3.34.04.22.02.0-2.01.9
Intermittent access standard deviation0.10.20.3-0.5-0.50.5-0.3
Left kidney weight5.525.528.15.35.3-5.14.5
Right kidney weight5.525.029.15.45.4-5.04.1
Cocaine induced anxiety0.91.21.31.11.1-1.11.0
Post-drug Anxiety0.50.50.90.90.9-0.70.3
Baseline Anxiety0.60.70.9-0.8-0.80.9-1.0
Tail length3.413.214.73.83.8-3.73.2
Length with tail3.213.716.74.04.1-3.73.0
Length without tail1.44.77.22.42.7-2.01.2
Times rat made contact with spout0.10.10.2-0.2-0.10.3-0.5
Lifetime Intake1.01.21.61.21.3-1.10.7
Liver weight, left1.11.82.11.41.4-1.31.2
Liver weight, right0.00.00.00.10.1-0.10.0
Locomotor activity0.10.10.3-0.2-0.20.4-0.6
Locomotor testing distance0.10.10.20.30.4-0.0-0.4
Locomotor testing rearing0.40.71.01.01.0-0.80.6
Locomotion in novel chamber1.31.72.3-1.5-1.41.3-0.9
Locomotion in novel chamber post-restriction0.60.91.2-0.9-0.81.0-1.1
Fecal boli incidents, locomotor time 10.30.40.50.60.5-0.60.7
Change in fecal boli incidents, locomotor task3.13.13.5-1.9-1.91.7-1.5
Time >=10cm from walls, locomotor time 10.00.10.2-0.1-0.10.2-0.4
Bouts of movement, locomotor time 10.50.61.60.30.1-0.71.3
Total resting periods, locomotor time 10.10.10.4-0.1-0.3-0.20.6
Rest time, locomotor task time 11.31.61.91.41.3-1.31.0
Distance moved, locomotor task time 11.21.82.1-1.4-1.41.4-1.1
Vertical activity count, locomotor time 11.43.45.0-2.2-2.21.8-0.9
Time >=10cm from walls, locomotor time 20.71.01.5-0.9-0.91.0-1.2
Bouts of movement, locomotor time 20.00.00.00.20.1-0.10.0
Total resting periods, locomotor time 20.00.00.00.20.1-0.20.2
Rest time, locomotor task time 20.10.10.20.0-0.1-0.20.5
Distance moved, locomotor task time 20.20.20.2-0.5-0.50.5-0.4
Vertical activity count, locomotor time 20.20.20.3-0.5-0.60.4-0.1
Light reinforcement 10.10.30.4-0.5-0.70.10.6
Light reinforcement 21.42.12.9-1.7-1.61.4-0.9
Bone: marrow area3.16.88.22.82.9-2.62.1
Bone: maximum diameter1.12.02.71.61.6-1.41.0
Bone: maximum force3.35.96.72.62.6-2.52.1
Bone: maximum moment3.96.87.42.72.7-2.72.3
Mean time between licks in bursts0.30.71.3-1.0-1.10.8-0.4
Mean num. licks in bursts0.10.10.30.40.5-0.30.1
Cd content in liver2.32.62.71.61.5-1.61.6
Co content in liver0.91.02.30.70.6-1.11.5
Cu content in liver0.91.11.31.01.1-1.10.9
Fe content in liver0.30.30.40.50.6-0.60.5
K content in liver0.00.00.0-0.1-0.00.0-0.0
Mg content in liver0.10.10.4-0.2-0.10.4-0.6
Mn content in liver0.00.10.2-0.10.10.2-0.4
Na content in liver3.33.54.0-2.0-1.91.9-1.7
Rb content in liver2.63.03.91.92.0-1.71.3
Se content in liver2.32.73.6-1.6-1.41.7-1.9
Sr content in liver6.05.27.2-2.6-2.72.2-1.3
Zn content in liver0.60.61.5-0.6-0.30.8-1.2
Bone: minimum diameter3.56.47.12.72.6-2.62.3
Time in familiar zone, hab. session 13.73.65.11.71.5-2.02.3
Time in novel zone, hab. session 12.92.93.1-1.7-1.61.8-1.7
Total zone transitions, hab. session 10.81.12.80.60.2-1.01.7
Total locomotion distance, hab. session 10.30.41.20.2-0.1-0.51.1
Locomotion velocity, hab. session 10.20.30.90.2-0.1-0.40.9
Time in familiar zone, hab. session 23.23.34.62.02.1-1.81.2
Time in novel zone, hab. session 22.12.22.7-1.6-1.61.5-1.2
Total zone transitions, hab. session 22.22.94.31.61.3-1.72.1
Total locomotion distance, hab. session 20.10.10.40.0-0.2-0.20.6
Locomotion velocity, hab. session 20.10.10.3-0.2-0.4-0.10.6
Novel to familiar place preference ratio0.00.00.00.20.2-0.10.0
Novelty place preference0.10.10.20.40.4-0.30.3
Time in novel zone, NPP test0.20.20.20.40.5-0.40.3
Total zone transitions, NPP test0.30.40.90.60.3-0.61.0
Total locomotion distance, NPP test0.30.40.50.70.6-0.60.6
Locomotion velocity, NPP test0.30.50.70.70.5-0.70.8
Intraocular pressure0.00.00.1-0.3-0.30.20.0
Delta distance traveled before/after self-admin2.42.52.7-1.6-1.51.7-1.6
Delta ambulatory time before/after self-admin1.51.92.0-1.4-1.41.4-1.3
Parametrial fat weight1.84.24.5-2.0-2.02.1-2.1
Pavlov. Cond. lever latency0.10.10.2-0.4-0.40.3-0.2
Pavlov. Cond. magazine entry latency0.70.91.3-0.8-0.71.0-1.2
Pavlov. Cond. change in total contacts0.20.30.3-0.5-0.60.5-0.4
Pavlov. Cond. index score0.30.30.4-0.5-0.50.6-0.6
Pavlov. Cond. latency score0.20.20.3-0.4-0.40.5-0.5
Pavlov. Cond. lever contacts0.10.10.30.50.5-0.30.1
Pavlov. Cond. magazine entry number0.20.30.50.50.4-0.60.7
Pavlov. Cond. intertrial magazine entries0.20.20.4-0.4-0.60.00.7
Pavlov. Cond. lever-magazine prob. diff.0.30.30.4-0.6-0.50.6-0.6
Pavlov. Cond. response bias0.00.10.20.00.10.2-0.4
Pavlov. Cond. lever latency0.30.40.40.60.6-0.60.6
Pavlov. Cond. magazine entry latency0.81.01.2-1.0-0.91.0-1.1
Pavlov. Cond. change in total contacts0.10.10.30.30.2-0.40.5
Pavlov. Cond. index score0.00.10.1-0.2-0.20.3-0.3
Pavlov. Cond. latency score0.40.50.5-0.7-0.60.7-0.7
Pavlov. Cond. lever contacts0.10.10.1-0.3-0.30.3-0.3
Pavlov. Cond. magazine entry number0.50.60.60.80.7-0.80.8
Pavlov. Cond. intertrial magazine entries3.24.85.02.22.2-2.22.1
Pavlov. Cond. lever-magazine prob. diff.0.10.10.1-0.4-0.40.4-0.4
Pavlov. Cond. response bias0.10.10.20.40.4-0.30.2
Time in closed arm before self-admin0.81.01.11.01.0-1.01.0
Time in closed arm after self-admin0.10.10.20.40.4-0.2-0.0
Time in open arm before self-admin2.32.62.6-1.6-1.61.6-1.6
Time in open arm after self-admin0.20.20.3-0.6-0.60.3-0.1
Bone: periosteal estimation2.45.05.72.42.4-2.31.9
Bone: periosteal perimeter1.93.33.51.91.9-1.91.7
Bone: post-yield work3.34.86.52.42.5-2.21.5
Progressive ratio test 1 active lever presses0.70.91.40.80.7-1.01.2
Progressive ratio test 1 breakpoint0.70.91.30.80.7-1.01.2
Progressive ratio test 1 inactive lever presses2.73.94.22.01.9-2.11.9
Progressive ratio test 2 active lever presses0.60.71.10.91.0-0.80.3
Progressive ratio test 2 breakpoint0.70.81.31.01.1-0.80.4
Progressive ratio test 2 inactive lever presses2.94.75.12.32.2-2.22.0
Incentive Sensitization - Responses1.41.93.11.61.7-1.30.7
Incentive Sensitization - Breakpoint1.01.32.21.31.5-1.00.4
Sum of active levers in priming session hrs 5-60.00.00.1-0.2-0.30.10.2
Progressive ratio0.00.00.10.0-0.2-0.10.3
Food seeking constrained by brief footshock1.11.34.2-0.3-0.8-0.52.1
Seeking ratio, punishment vs. effort0.50.71.60.60.5-0.91.3
Retroperitoneal fat weight4.418.623.1-4.1-3.84.5-4.8
Reaction time number correct0.10.20.3-0.4-0.60.4-0.3
Reaction time mean minus median0.00.00.00.00.0-0.00.1
Reaction time mean minus median AUC0.00.00.0-0.10.00.1-0.2
Reaction time num false alarms0.00.00.0-0.10.0-0.0-0.1
Reaction time num false alarms AUC0.20.20.4-0.7-0.60.3-0.2
Reaction time trials correct on left0.10.20.3-0.4-0.60.4-0.3
Reaction time trials on left0.10.20.3-0.4-0.60.4-0.2
Reaction time mean0.60.91.41.01.2-0.90.6
Reaction time mean AUC0.20.30.60.60.8-0.50.2
Median of all reaction times0.60.81.31.01.2-0.90.5
Reaction time omissions0.10.10.2-0.3-0.40.10.3
Reaction time false alarm rate0.00.10.1-0.4-0.30.1-0.0
Reaction time premature initiation rate0.00.00.10.20.2-0.1-0.0
Reaction time premature initiations0.00.00.1-0.1-0.10.2-0.3
Std. dev. reaction times0.30.60.90.81.0-0.80.5
Reaction time trials completed0.10.20.3-0.4-0.60.4-0.2
Reaction time trials AUC0.10.10.2-0.3-0.40.4-0.3
Run reversals in cocaine runway, females0.30.30.60.60.8-0.50.1
Run reversals in cocaine runway, males0.00.00.00.10.1-0.1-0.0
Latency to leave start box in cocaine runway0.60.70.70.90.8-0.80.7
Latency to leave start box in cocaine runway, F0.10.10.10.30.3-0.30.2
Latency to leave start box in cocaine runway, M1.61.51.71.31.3-1.21.1
Std. dev. time between licks in bursts0.20.30.7-0.5-0.90.20.5
Total sessions with >9 infusions1.01.21.51.01.0-1.11.2
Short access day 1 total inactive lever presses0.70.91.51.11.2-0.90.5
Short access day 10 total inactive lever presses0.10.20.30.50.5-0.50.4
Short access day 1 total infusions0.00.00.00.00.0-0.10.1
Short access day 10 total infusions0.00.00.0-0.1-0.10.1-0.0
Short access total infusions0.00.00.0-0.2-0.20.2-0.2
Short access day 1 locomotion0.30.40.60.70.8-0.60.4
Short access day 10 total locomotion0.61.22.50.80.6-1.11.6
Short access total locomotion0.40.51.40.30.1-0.61.2
One hour access (0.3 mA shock)4.55.15.92.42.4-2.31.9
Compulsive drug intake2.02.42.71.61.6-1.61.4
One hour access (shock baseline)0.30.40.70.80.9-0.50.0
Social response proportion0.80.91.51.11.2-0.90.4
Social responses3.03.94.52.12.1-2.01.7
Social time3.54.86.42.11.8-2.32.5
Soleus weight0.00.10.20.40.4-0.30.2
Bone: stiffness2.94.75.22.22.3-2.21.9
Tibialis anterior weight0.82.63.9-1.4-1.31.7-2.0
Time to tail flick, vehicle, before self-admin0.50.50.90.60.4-0.71.0
Time to tail flick, vehicle, after self-admin0.30.40.70.80.8-0.60.2
Time to tail flick, test, before self-admin0.30.30.5-0.5-0.70.10.6
Time to tail flick, test, after self-admin0.30.30.6-0.4-0.40.5-0.8
Delta time to tail flick, vehicle, before/after SA0.10.10.4-0.10.00.3-0.6
Delta time to tail flick, test, before/after SA0.20.20.30.40.5-0.1-0.5
Tibia length3.810.512.33.53.5-3.22.6
Ambulatory time before self-admin1.52.35.01.10.9-1.52.2
Ambulatory time after self-admin0.30.41.2-0.2-0.4-0.21.1
Bone: tissue strength0.30.30.80.30.0-0.50.9
Total heroin consumption0.00.00.1-0.2-0.20.1-0.0
Bone: trabecular number0.10.20.3-0.5-0.50.4-0.2
Bone: trabecular spacing0.00.00.00.10.10.0-0.2
Bone: trabecular thickness0.00.00.00.00.1-0.10.1
Bone: trabecular tissue density0.71.11.7-0.9-0.71.1-1.3
Water consumed over 24 hours0.91.31.71.10.9-1.21.3
Number of responses in last shaping day0.00.00.10.10.20.0-0.3