Lima1

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Liver alternative TSS XM_006257354.4 0.05 0.05 1.0e-05 0.04 0.04 0.04 0.04 8.9e-05 3.4e-05 2.7e-05 5.2e-05
2 Liver gene expression Lima1 0.03 0.03 8.3e-04 0.02 0.02 0.02 0.01 5.3e-03 2.9e-03 6.3e-03 7.4e-03
3 Adipose gene expression Lima1 0.09 0.08 2.7e-09 0.06 0.07 0.06 0.06 9.9e-08 4.7e-08 1.2e-07 1.1e-07
4 Liver isoform ratio XM_006257354.4 0.05 0.05 2.2e-05 0.03 0.04 0.04 0.03 9.4e-05 8.7e-05 4.3e-05 1.0e-04
5 Liver alternative TSS NM_001191615.3 0.05 0.05 2.2e-05 0.03 0.04 0.04 0.03 1.9e-04 5.8e-05 7.6e-05 1.3e-04
6 Liver isoform ratio NM_001191615.3 0.05 0.05 3.6e-05 0.03 0.03 0.04 0.03 1.2e-04 1.2e-04 6.2e-05 1.2e-04
7 NAcc intron excision ratio chr7_130908211_130917240 0.03 0.03 5.7e-03 0.02 0.02 0.02 0.02 2.4e-03 5.5e-03 3.7e-03 2.1e-03
8 Liver intron excision ratio chr7_130967692_130985745 0.04 0.05 2.6e-04 0.03 0.03 0.03 0.03 9.5e-05 2.9e-04 1.6e-04 2.2e-04
9 Liver intron excision ratio chr7_130967692_131001423 0.04 0.04 2.3e-04 0.04 0.03 0.03 0.03 8.3e-05 5.3e-04 2.6e-04 1.9e-04
10 Brain gene expression Lima1 0.06 0.05 1.1e-05 0.06 0.06 0.06 0.06 6.4e-06 2.9e-06 2.0e-06 3.1e-06
11 Eye gene expression Lima1 0.35 0.2 8.2e-05 0.36 0.26 0.35 0.35 1.5e-06 6.5e-05 2.1e-06 2.5e-06
12 Brain mRNA stability Lima1 0.04 0.04 5.1e-03 0.01 0.02 0.02 0.02 1.4e-02 7.6e-03 6.5e-03 5.2e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4 5 6 7 8 9 10 11 12
Bone: apparent density6.811.412.3-3.4-3.5-3.5-3.4-3.53.4-3.4-3.33.43.43.42.8
Area under the delay curve1.31.31.6-1.3-1.1-1.1-1.2-1.11.2-1.1-1.31.01.21.11.1
BMI with tail4.313.815.3-3.7-3.8-3.8-3.7-3.83.7-3.7-3.63.73.63.73.9
BMI without tail0.20.50.6-0.7-0.7-0.7-0.7-0.70.7-0.6-0.70.70.60.70.8
Body weight4.920.523.0-4.5-4.6-4.6-4.5-4.64.4-4.7-4.44.34.84.44.6
Weight adjusted by age0.30.30.8-0.3-0.6-0.6-0.3-0.60.4-0.9-0.20.40.90.30.7
Bone surface9.316.317.6-4.1-4.2-4.2-4.1-4.24.1-4.0-4.04.14.04.13.5
Bone volume8.614.715.4-3.9-3.9-3.9-3.9-3.93.9-3.8-3.83.93.83.93.4
Breakpoint value in progressive ratio session0.00.10.2-0.1-0.2-0.2-0.1-0.20.1-0.5-0.10.10.40.30.2
Number of licking bursts1.11.32.21.01.11.11.01.1-1.01.51.0-1.2-1.5-1.2-0.8
Context. condit. distance diff. score0.20.30.4-0.6-0.5-0.5-0.6-0.50.6-0.4-0.60.40.50.4-0.2
Locomotion velocity, session 14.34.65.32.32.12.12.32.1-2.32.12.2-2.1-1.9-2.1-2.3
Locomotion distance, session 12.83.63.91.92.02.01.92.0-1.91.91.9-1.9-1.8-1.9-1.8
Locomotion velocity, session 20.30.40.70.60.60.60.60.6-0.60.50.6-0.6-0.6-0.6-0.8
Locomotion distance, session 23.14.35.52.12.12.12.12.1-2.12.02.0-2.1-2.0-2.0-2.3
Locomotion velocity, session 34.55.36.02.42.42.42.42.4-2.32.42.3-2.3-2.4-2.2-1.6
Locomotion distance, session 32.83.13.51.81.91.91.81.9-1.81.71.7-1.8-1.6-1.8-1.6
Stereotopy head waving bouts, day 30.00.00.20.0-0.1-0.10.0-0.1-0.0-0.20.00.10.20.20.4
Stereotopy head waving duration, day 30.00.10.10.30.20.20.30.2-0.30.10.3-0.2-0.1-0.10.3
Locomotion velocity, session 73.03.33.71.91.81.81.91.8-1.91.61.9-1.8-1.4-1.8-1.9
Locomotion distance, session 74.05.15.52.32.32.32.32.3-2.32.22.3-2.3-1.9-2.3-2.2
Stereotopy head waving bouts, day 70.50.50.8-0.7-0.8-0.8-0.7-0.80.7-0.7-0.70.90.70.90.5
Stereotopy head waving duration, day 71.01.31.6-1.1-1.2-1.2-1.1-1.11.1-1.1-1.11.21.01.21.1
Locomotion velocity, session 80.60.71.30.90.70.70.90.7-0.90.71.0-0.7-0.8-0.7-1.1
Locomotion distance, session 81.21.83.81.21.31.31.21.3-1.21.41.2-1.3-1.3-1.3-2.0
Degree of sensitization distance0.00.00.00.0-0.1-0.10.0-0.0-0.0-0.00.0-0.00.1-0.0-0.1
Degree of sensitization stereotypy0.60.70.9-0.8-0.8-0.8-0.8-0.80.8-0.8-0.81.00.70.90.6
Conditioned locomotion0.00.00.10.10.10.10.10.1-0.10.20.1-0.1-0.3-0.10.3
Cocaine response after cond. corrected0.00.00.20.00.00.00.00.0-0.0-0.20.00.00.3-0.00.4
Cocaine response after cond. not corrected0.20.20.20.50.50.50.50.5-0.50.40.5-0.5-0.3-0.50.1
Cocaine response before conditioning2.02.43.31.51.61.61.51.6-1.51.81.5-1.5-1.8-1.5-1.4
Saline control response0.00.00.20.00.00.00.00.0-0.00.20.1-0.1-0.4-0.1-0.5
Bone: connectivity density3.55.56.1-2.3-2.5-2.5-2.3-2.42.3-2.4-2.32.42.42.42.0
Bone: cortical apparent density0.20.30.50.70.60.60.70.6-0.70.40.7-0.5-0.3-0.50.1
Bone: cortical area5.68.59.2-2.9-3.0-3.0-2.9-3.02.9-2.9-2.92.92.92.82.7
Bone: cortical porosity0.10.10.1-0.3-0.2-0.2-0.4-0.20.4-0.1-0.30.2-0.00.20.3
Bone: cortical porosity0.00.00.1-0.10.10.1-0.10.10.10.2-0.0-0.1-0.2-0.10.0
Bone: cortical thickness1.52.42.8-1.5-1.6-1.6-1.5-1.61.5-1.5-1.51.51.51.51.7
Bone: cortical thickness0.30.30.50.60.50.50.60.5-0.60.60.6-0.6-0.6-0.7-0.5
Bone: cortical tissue density0.30.40.70.80.70.70.80.7-0.80.50.8-0.6-0.4-0.6-0.1
Condit. Reinf. active minus inactive responses0.10.10.20.20.30.30.20.3-0.20.40.2-0.3-0.2-0.4-0.4
Condit. Reinf. active-inactive response ratio0.20.20.2-0.5-0.4-0.4-0.5-0.40.5-0.3-0.50.30.40.20.3
Condit. Reinf. active responses0.80.91.01.00.90.91.00.9-1.01.01.0-1.0-0.9-1.0-1.0
Condit. Reinf. inactive responses2.93.53.92.01.91.92.01.9-2.01.72.0-1.8-1.8-1.7-1.8
Incentive salience index mean0.00.00.0-0.1-0.1-0.1-0.1-0.10.10.0-0.1-0.00.1-0.1-0.1
Condit. Reinf. lever presses0.50.60.7-0.8-0.8-0.8-0.8-0.80.8-0.9-0.80.80.80.70.5
Condit. Reinf. active minus inactive responses0.91.11.3-1.1-1.1-1.1-1.1-1.11.1-0.8-1.11.10.51.21.1
Condit. Reinf. active-inactive response ratio0.70.71.1-0.9-0.9-0.9-0.9-0.90.9-0.7-0.91.00.31.10.7
Condit. Reinf. active responses0.10.10.3-0.3-0.3-0.3-0.3-0.30.4-0.2-0.30.4-0.00.40.5
Condit. Reinf. inactive responses0.80.91.11.01.01.01.01.0-1.00.91.0-1.0-0.8-1.0-0.6
Condit. Reinf. lever presses0.00.00.10.1-0.0-0.00.1-0.0-0.1-0.00.10.0-0.30.00.1
Condit. Reinf. lever reinforcers received0.00.00.30.10.10.10.10.1-0.10.30.2-0.1-0.5-0.10.1
Conditioned reinforcement - actives1.01.01.31.01.11.11.01.1-1.00.91.0-1.0-0.9-0.8-1.1
Conditioned reinforcement - inactives2.02.22.81.61.51.51.61.5-1.51.51.7-1.4-1.5-1.2-1.4
Conditioned locomotion0.10.20.20.40.40.40.40.4-0.40.50.4-0.4-0.5-0.2-0.4
Patch foraging indifference point 0 sec6.210.010.93.23.13.13.13.1-3.13.33.2-3.3-3.0-3.3-3.2
Patch foraging indifference point AUC0.20.30.60.60.50.40.60.4-0.60.40.6-0.3-0.8-0.4-0.3
Delay disc. indifference point, 0s delay2.12.32.6-1.5-1.5-1.5-1.5-1.51.5-1.4-1.51.61.41.61.5
Delay disc. indifference point, 16s delay1.01.01.3-1.0-1.0-1.0-1.0-1.01.0-1.1-1.10.81.11.11.0
Delay disc. indifference point, 2s delay2.02.22.7-1.6-1.5-1.5-1.6-1.51.6-1.5-1.61.51.61.21.1
Delay disc. indifference point, 24s delay0.70.71.4-0.8-0.8-0.8-0.8-0.80.8-0.8-0.80.70.80.61.2
Delay disc. indifference point, 4s delay1.21.21.8-1.1-1.1-1.1-1.1-1.11.1-1.1-1.01.21.11.30.9
Delay disc. indifference point, 8s delay1.61.72.1-1.4-1.3-1.3-1.4-1.31.3-1.3-1.41.01.41.21.2
Indifference point function ln k5.17.17.7-2.8-2.6-2.6-2.8-2.62.8-2.6-2.82.52.72.52.6
Indifference point function log k5.17.17.7-2.8-2.6-2.6-2.8-2.62.8-2.6-2.82.52.72.52.6
Patch foraging total patch changes 0 sec5.89.310.23.03.03.03.03.0-3.03.23.1-3.2-3.0-3.2-3.2
Patch foraging total patch changes 12 sec6.28.08.72.92.82.82.92.8-2.92.82.9-2.9-2.6-2.8-3.0
Patch foraging total patch changes 18 sec7.810.010.73.33.13.13.23.1-3.23.13.3-3.0-3.3-3.0-3.2
Patch foraging total patch changes 24 sec4.65.66.12.42.32.32.42.3-2.42.52.4-2.4-2.4-2.3-2.3
Patch foraging total patch changes 6 sec7.110.511.63.43.23.23.43.2-3.43.33.4-3.2-3.1-3.2-2.9
Patch foraging time to switch 0 sec2.43.64.32.12.02.02.12.0-2.01.82.0-1.9-1.7-1.7-1.5
Patch foraging water rate 0 sec3.25.25.8-2.4-2.3-2.3-2.4-2.32.4-2.1-2.42.32.12.12.0
Patch foraging water rate 12 sec2.74.14.7-2.2-2.1-2.1-2.2-2.12.1-1.8-2.22.01.81.82.0
Patch foraging water rate 18 sec0.50.71.0-1.0-0.7-0.7-1.0-0.71.0-0.6-1.00.60.90.60.6
Patch foraging water rate 24 sec4.76.67.2-2.7-2.5-2.5-2.7-2.52.7-2.5-2.72.72.32.52.4
Patch foraging water rate 6 sec5.68.29.0-3.0-2.9-2.9-3.0-2.93.0-2.9-3.02.92.72.72.5
Seeking ratio, delayed vs. immediate footshock0.60.71.0-1.0-0.9-0.9-1.0-0.91.0-0.6-0.90.90.40.80.7
Distance traveled before self-admin2.52.73.11.71.61.61.71.7-1.71.61.8-1.6-1.2-1.6-1.7
Distance traveled after self-admin0.50.60.70.80.80.80.80.8-0.80.80.8-0.7-0.5-0.8-0.7
Extensor digitorum longus weight4.618.120.0-4.2-4.3-4.3-4.2-4.34.2-4.5-4.14.34.24.44.1
Bone: elastic displacement6.87.78.62.92.82.82.92.8-2.92.82.9-2.7-2.7-2.8-2.2
Bone: elastic work0.00.00.10.20.10.10.20.1-0.2-0.00.2-0.00.2-0.10.4
Bone: endosteal estimation7.015.216.6-4.1-4.1-4.0-4.1-4.04.1-3.9-4.03.93.83.82.8
Bone: endosteal perimeter6.513.514.7-3.8-3.8-3.8-3.8-3.83.8-3.6-3.83.73.43.63.0
Epididymis fat weight0.00.00.0-0.0-0.2-0.2-0.0-0.20.0-0.1-0.00.20.10.20.1
Delta time in closed arm before/after self-admin0.10.10.1-0.4-0.3-0.3-0.4-0.30.4-0.2-0.40.20.30.20.2
Delta time in open arm before/after self-admin3.73.64.81.91.91.91.91.9-1.92.11.9-1.7-2.2-1.8-1.8
Diff in mean of infusions in LGA sessions1.41.52.1-1.2-1.3-1.3-1.2-1.31.2-1.4-1.21.01.41.11.0
Delay discount exponential model param1.21.31.61.21.11.11.21.1-1.21.11.3-1.0-1.2-1.1-1.1
Extinction: sum of active levers before priming0.80.80.9-0.9-0.9-0.9-0.9-0.90.9-0.8-0.80.81.00.90.8
Active lever presses in extinction session 60.10.10.2-0.1-0.2-0.2-0.1-0.20.1-0.5-0.10.20.30.30.2
Bone: final force10.516.917.7-4.2-4.2-4.2-4.2-4.24.2-4.1-4.14.14.14.03.8
Bone: final moment12.019.420.2-4.5-4.5-4.5-4.5-4.54.5-4.4-4.44.44.34.34.1
Food consumed during 24 hour testing period1.72.02.5-1.6-1.5-1.5-1.6-1.51.6-1.3-1.61.31.31.21.0
Glucose0.30.51.00.60.60.60.60.6-0.61.00.5-0.7-0.9-0.6-0.7
Heart weight0.10.10.3-0.3-0.3-0.3-0.3-0.30.3-0.3-0.30.30.30.50.4
Delay discount hyperbolic model param1.31.41.71.31.21.11.31.1-1.31.11.3-1.1-1.3-1.1-1.1
Intermittent access intake day 1-15 change0.10.10.20.30.50.50.30.5-0.30.30.2-0.2-0.4-0.10.0
Intermittent access intake escalation0.00.00.1-0.10.20.2-0.00.20.0-0.1-0.10.1-0.00.20.3
Intermittent access intake escalation 20.10.10.10.20.40.30.20.3-0.20.20.2-0.1-0.4-0.20.1
Intermitt. access day 1 inactive lever presses0.30.30.40.40.60.60.50.6-0.50.60.4-0.5-0.5-0.5-0.4
Intermitt. access day 15 inactive lever presses0.00.10.10.10.30.30.10.3-0.10.20.1-0.2-0.2-0.2-0.3
Intermitt. access escalation Index0.80.70.90.70.80.80.80.8-0.81.00.7-0.8-0.8-0.9-0.8
Intermittent access day 1 total infusions1.31.52.01.21.21.21.21.2-1.11.21.3-1.2-1.1-1.1-1.4
Intermittent access day 15 total infusions1.51.72.11.31.51.51.31.4-1.31.31.2-1.3-1.2-1.1-1.3
Intermittent access terminal intake (last 3 days)1.51.62.01.21.41.41.21.4-1.21.31.2-1.2-1.2-1.1-1.4
Intermittent access total infusions1.51.72.01.31.41.41.31.4-1.21.31.3-1.3-1.3-1.0-1.4
Intermittent access day 1 locomotion1.51.62.01.31.31.31.21.3-1.21.21.3-1.4-1.1-1.1-1.4
Intermittent access day 15 total locomotion1.01.11.41.01.11.11.01.1-1.01.21.0-1.1-1.1-0.9-0.9
Intermittent access total locomotion3.74.24.82.02.12.12.02.1-2.02.22.0-2.1-2.0-1.9-2.0
Intermittent access standard deviation0.00.00.10.00.00.0-0.00.00.0-0.20.10.00.10.2-0.1
Left kidney weight1.02.94.3-1.6-1.6-1.7-1.6-1.71.6-1.8-1.51.62.11.81.7
Right kidney weight2.26.28.6-2.4-2.5-2.5-2.4-2.52.4-2.5-2.42.42.92.42.4
Cocaine induced anxiety0.91.01.5-1.1-1.0-1.0-1.0-1.01.0-1.2-1.10.91.21.10.3
Post-drug Anxiety5.05.66.1-2.5-2.4-2.4-2.4-2.42.4-2.4-2.52.32.52.41.9
Baseline Anxiety0.70.81.9-0.7-0.9-0.9-0.8-0.90.8-0.8-0.60.90.80.61.4
Tail length0.00.00.10.00.20.20.10.2-0.10.2-0.0-0.20.1-0.3-0.2
Length with tail1.76.18.0-2.5-2.5-2.5-2.5-2.52.5-2.5-2.52.32.82.22.4
Length without tail4.710.211.4-3.1-3.3-3.3-3.1-3.33.1-3.3-3.13.13.43.13.2
Times rat made contact with spout0.00.00.00.10.10.10.10.1-0.10.10.1-0.1-0.1-0.1-0.2
Lifetime Intake2.22.52.91.61.71.71.61.7-1.61.51.6-1.6-1.5-1.4-1.6
Liver weight, left1.62.62.9-1.7-1.7-1.6-1.7-1.61.7-1.4-1.71.61.41.51.6
Liver weight, right1.52.52.8-1.6-1.6-1.6-1.6-1.61.6-1.6-1.61.51.71.41.5
Locomotor activity1.11.72.31.41.31.31.41.3-1.31.31.4-1.5-0.7-1.4-1.2
Locomotor testing distance3.15.26.22.32.32.32.32.3-2.32.42.3-2.5-1.8-2.3-2.0
Locomotor testing rearing2.23.43.91.81.81.81.81.8-1.81.81.8-2.0-1.6-1.9-1.8
Locomotion in novel chamber2.73.44.0-1.9-1.8-1.8-1.9-1.81.9-1.9-1.81.91.42.01.9
Locomotion in novel chamber post-restriction0.40.50.6-0.7-0.7-0.7-0.7-0.70.7-0.8-0.60.80.50.40.8
Fecal boli incidents, locomotor time 11.01.11.90.91.11.10.91.1-0.91.40.9-1.1-1.2-0.8-0.8
Change in fecal boli incidents, locomotor task0.30.30.5-0.4-0.6-0.6-0.4-0.60.4-0.7-0.50.50.70.40.7
Time >=10cm from walls, locomotor time 10.30.30.40.60.50.50.60.5-0.60.50.6-0.6-0.5-0.5-0.6
Bouts of movement, locomotor time 10.00.00.1-0.1-0.1-0.1-0.1-0.10.10.1-0.10.00.10.10.3
Total resting periods, locomotor time 10.30.40.60.60.60.60.60.6-0.60.80.6-0.7-0.6-0.7-0.3
Rest time, locomotor task time 10.70.71.00.80.90.90.80.9-0.81.00.8-1.0-0.8-0.8-0.9
Distance moved, locomotor task time 10.00.00.00.10.10.10.10.1-0.1-0.00.10.0-0.10.10.0
Vertical activity count, locomotor time 11.01.01.4-1.0-1.0-1.0-1.0-1.01.0-0.9-1.01.11.01.20.8
Time >=10cm from walls, locomotor time 20.40.40.90.60.60.60.60.6-0.60.60.6-0.5-0.5-0.1-1.0
Bouts of movement, locomotor time 23.23.53.7-1.9-1.9-1.9-1.9-1.91.9-1.7-1.91.91.81.71.9
Total resting periods, locomotor time 23.74.04.6-2.0-2.0-2.0-2.0-2.02.0-1.9-2.02.11.91.82.1
Rest time, locomotor task time 20.10.20.40.40.30.30.40.3-0.40.50.4-0.3-0.4-0.60.2
Distance moved, locomotor task time 20.10.10.70.30.30.30.30.3-0.30.20.3-0.2-0.10.0-0.9
Vertical activity count, locomotor time 20.10.10.4-0.4-0.3-0.3-0.3-0.30.3-0.3-0.40.50.40.7-0.1
Light reinforcement 10.81.42.11.11.21.21.11.2-1.11.51.0-1.1-1.4-1.1-1.3
Light reinforcement 20.00.10.1-0.3-0.1-0.1-0.3-0.10.2-0.1-0.30.30.30.2-0.3
Bone: marrow area6.514.215.5-3.9-3.9-3.9-3.9-3.93.9-3.7-3.93.83.73.72.7
Bone: maximum diameter1.52.83.1-1.7-1.8-1.8-1.7-1.71.7-1.6-1.71.61.71.61.4
Bone: maximum force13.723.624.8-4.9-5.0-5.0-4.9-5.04.9-4.9-4.84.84.94.74.4
Bone: maximum moment15.526.627.8-5.2-5.3-5.3-5.2-5.35.2-5.2-5.25.15.25.04.7
Mean time between licks in bursts0.00.00.10.20.20.20.20.2-0.20.00.2-0.00.1-0.1-0.3
Mean num. licks in bursts0.40.51.1-0.6-0.7-0.7-0.6-0.70.6-1.1-0.60.81.00.80.4
Cd content in liver0.50.50.70.70.70.70.70.7-0.70.80.7-0.7-0.9-0.7-0.5
Co content in liver0.40.50.60.80.70.70.80.7-0.80.70.7-0.7-0.5-0.7-0.3
Cu content in liver0.20.20.6-0.5-0.5-0.5-0.5-0.50.5-0.4-0.50.30.30.20.8
Fe content in liver1.01.11.41.21.11.11.21.1-1.21.01.2-1.0-0.9-1.1-0.8
K content in liver0.10.10.20.30.20.30.30.3-0.30.20.3-0.3-0.2-0.4-0.1
Mg content in liver0.20.20.40.50.50.50.40.5-0.40.40.5-0.5-0.5-0.6-0.1
Mn content in liver0.10.20.3-0.4-0.4-0.4-0.4-0.40.4-0.4-0.50.30.40.10.5
Na content in liver0.30.30.40.60.50.50.60.5-0.60.50.6-0.5-0.5-0.5-0.3
Rb content in liver2.22.83.31.71.61.61.71.6-1.71.71.6-1.8-1.6-1.8-1.5
Se content in liver2.12.62.91.71.61.61.71.6-1.71.61.7-1.6-1.7-1.6-1.2
Sr content in liver0.00.00.0-0.1-0.1-0.1-0.1-0.10.1-0.0-0.10.1-0.10.20.0
Zn content in liver2.73.03.41.71.71.71.71.7-1.71.81.7-1.8-1.7-1.8-1.9
Bone: minimum diameter8.015.016.0-4.0-4.0-4.0-4.0-4.04.0-3.9-3.93.93.83.83.4
Time in familiar zone, hab. session 10.00.00.0-0.1-0.0-0.1-0.1-0.10.1-0.1-0.10.20.00.2-0.1
Time in novel zone, hab. session 10.00.00.1-0.2-0.2-0.1-0.2-0.10.20.0-0.20.00.10.10.3
Total zone transitions, hab. session 10.10.10.20.30.30.30.30.3-0.30.40.3-0.2-0.4-0.2-0.3
Total locomotion distance, hab. session 10.30.40.50.60.60.70.60.7-0.60.70.6-0.7-0.5-0.7-0.1
Locomotion velocity, hab. session 10.20.20.30.50.50.50.50.5-0.50.50.4-0.6-0.4-0.6-0.1
Time in familiar zone, hab. session 21.51.61.8-1.3-1.3-1.3-1.3-1.31.3-1.3-1.31.31.21.30.8
Time in novel zone, hab. session 21.71.72.11.31.31.31.31.3-1.31.51.3-1.4-1.2-1.4-0.9
Total zone transitions, hab. session 20.20.30.30.50.50.50.50.5-0.50.60.5-0.6-0.6-0.6-0.4
Total locomotion distance, hab. session 20.40.50.70.60.70.70.70.7-0.70.80.6-0.8-0.7-0.8-0.4
Locomotion velocity, hab. session 20.20.30.40.50.50.50.50.5-0.50.60.4-0.6-0.5-0.7-0.2
Novel to familiar place preference ratio1.51.52.5-1.3-1.3-1.3-1.3-1.31.3-1.0-1.31.11.01.11.6
Novelty place preference0.90.91.8-1.0-1.0-1.0-1.0-1.01.0-0.7-1.00.80.70.81.3
Time in novel zone, NPP test0.60.61.5-0.8-0.8-0.8-0.8-0.80.8-0.5-0.80.70.60.71.2
Total zone transitions, NPP test2.73.84.12.02.02.02.02.0-2.02.01.9-2.0-1.8-2.0-1.9
Total locomotion distance, NPP test3.54.85.32.22.22.22.22.2-2.22.22.1-2.3-2.1-2.3-1.9
Locomotion velocity, NPP test2.33.23.61.81.81.81.81.8-1.81.81.8-1.9-1.8-1.9-1.5
Intraocular pressure5.07.07.62.62.72.72.62.7-2.62.72.6-2.5-2.7-2.6-2.8
Delta distance traveled before/after self-admin0.20.20.4-0.6-0.5-0.5-0.6-0.50.6-0.3-0.60.50.20.40.5
Delta ambulatory time before/after self-admin0.10.10.2-0.5-0.3-0.3-0.4-0.30.4-0.2-0.50.30.10.30.3
Parametrial fat weight1.22.43.01.61.61.61.51.6-1.51.61.6-1.5-1.7-1.5-1.5
Pavlov. Cond. lever latency0.20.20.60.40.40.40.40.4-0.40.50.4-0.4-0.3-0.4-0.8
Pavlov. Cond. magazine entry latency1.01.31.6-1.2-1.1-1.1-1.2-1.11.3-1.1-1.21.11.11.10.9
Pavlov. Cond. change in total contacts1.31.41.5-1.2-1.1-1.2-1.2-1.21.2-1.2-1.11.21.11.21.2
Pavlov. Cond. index score0.81.01.2-1.0-1.0-1.0-1.0-1.01.0-1.0-1.00.90.90.91.1
Pavlov. Cond. latency score0.60.71.1-0.9-0.8-0.8-0.9-0.90.9-0.9-0.80.80.70.81.0
Pavlov. Cond. lever contacts0.10.10.3-0.3-0.2-0.2-0.3-0.20.3-0.4-0.20.30.20.20.6
Pavlov. Cond. magazine entry number0.40.40.60.70.70.70.80.7-0.80.70.7-0.6-0.7-0.6-0.3
Pavlov. Cond. intertrial magazine entries4.95.96.62.62.42.42.62.4-2.62.32.5-2.5-2.2-2.5-2.1
Pavlov. Cond. lever-magazine prob. diff.1.11.41.6-1.2-1.2-1.2-1.2-1.21.2-1.2-1.11.11.11.11.3
Pavlov. Cond. response bias0.30.30.4-0.6-0.6-0.6-0.6-0.60.6-0.6-0.60.60.60.50.5
Pavlov. Cond. lever latency1.11.42.2-1.3-1.1-1.1-1.3-1.11.2-1.1-1.31.11.51.11.3
Pavlov. Cond. magazine entry latency0.10.20.50.40.20.20.40.2-0.40.40.4-0.2-0.6-0.2-0.7
Pavlov. Cond. change in total contacts0.30.50.7-0.7-0.9-0.9-0.7-0.90.7-0.7-0.60.70.40.70.3
Pavlov. Cond. index score0.50.71.40.90.60.60.90.6-0.80.80.9-0.7-1.1-0.7-1.2
Pavlov. Cond. latency score0.50.71.50.80.60.60.80.6-0.80.80.8-0.7-1.1-0.7-1.2
Pavlov. Cond. lever contacts0.91.32.21.21.01.01.21.0-1.11.11.2-1.0-1.5-1.0-1.2
Pavlov. Cond. magazine entry number0.00.10.4-0.20.10.1-0.20.10.2-0.2-0.2-0.00.4-0.00.6
Pavlov. Cond. intertrial magazine entries1.82.32.81.51.71.71.51.6-1.51.51.5-1.7-1.4-1.6-1.0
Pavlov. Cond. lever-magazine prob. diff.0.20.30.70.50.30.30.50.3-0.50.50.6-0.4-0.8-0.4-0.8
Pavlov. Cond. response bias0.50.71.40.90.70.70.80.7-0.80.90.9-0.7-1.2-0.7-0.9
Time in closed arm before self-admin0.91.01.2-0.9-1.1-1.1-0.9-1.00.9-1.1-0.91.10.91.01.0
Time in closed arm after self-admin0.40.40.6-0.7-0.7-0.7-0.7-0.70.6-0.8-0.70.60.70.60.6
Time in open arm before self-admin0.20.21.0-0.4-0.3-0.3-0.4-0.30.4-0.5-0.40.11.00.20.3
Time in open arm after self-admin0.20.20.30.50.50.50.50.5-0.50.40.5-0.5-0.3-0.6-0.5
Bone: periosteal estimation9.018.520.1-4.4-4.5-4.5-4.4-4.54.4-4.3-4.44.34.34.23.5
Bone: periosteal perimeter9.015.016.0-4.0-4.0-4.0-4.0-4.04.0-3.7-3.93.83.73.83.4
Bone: post-yield work8.111.012.2-3.5-3.4-3.4-3.5-3.43.5-3.3-3.53.33.33.22.2
Progressive ratio test 1 active lever presses8.38.69.62.93.03.02.93.0-2.93.12.9-3.0-2.8-2.8-2.9
Progressive ratio test 1 breakpoint6.97.38.12.72.82.82.72.8-2.72.92.6-2.8-2.6-2.6-2.7
Progressive ratio test 1 inactive lever presses2.02.22.61.51.61.61.51.6-1.51.41.4-1.5-1.4-1.3-1.3
Progressive ratio test 2 active lever presses1.92.12.31.41.51.51.41.5-1.41.51.4-1.4-1.4-1.3-1.5
Progressive ratio test 2 breakpoint2.12.42.71.51.61.61.51.6-1.51.61.5-1.5-1.6-1.6-1.5
Progressive ratio test 2 inactive lever presses1.01.21.41.11.21.21.11.2-1.11.11.1-1.0-1.1-0.8-1.1
Incentive Sensitization - Responses0.30.30.4-0.6-0.6-0.6-0.6-0.60.7-0.5-0.60.60.40.60.5
Incentive Sensitization - Breakpoint0.20.20.3-0.6-0.5-0.5-0.6-0.50.6-0.4-0.50.60.30.50.5
Sum of active levers in priming session hrs 5-60.40.40.50.70.70.70.70.7-0.70.60.7-0.6-0.7-0.5-0.5
Progressive ratio1.01.11.41.11.01.01.11.1-1.11.11.1-1.1-1.0-1.2-0.9
Food seeking constrained by brief footshock1.72.12.41.51.51.51.51.5-1.51.31.4-1.5-1.1-1.5-1.4
Seeking ratio, punishment vs. effort0.10.10.2-0.3-0.3-0.3-0.3-0.30.3-0.4-0.40.40.40.30.2
Retroperitoneal fat weight1.13.64.22.01.91.92.01.9-1.91.82.0-1.9-1.7-1.8-2.0
Reaction time number correct1.11.61.8-1.3-1.3-1.3-1.3-1.31.3-1.3-1.31.21.21.20.8
Reaction time mean minus median5.67.48.52.72.82.82.72.7-2.72.92.6-2.7-2.9-2.6-2.6
Reaction time mean minus median AUC4.15.36.22.32.32.32.32.3-2.32.52.2-2.2-2.5-2.2-2.2
Reaction time num false alarms1.41.92.21.31.41.41.31.4-1.31.51.4-1.4-1.5-1.2-1.4
Reaction time num false alarms AUC1.52.12.61.41.51.51.41.5-1.41.61.5-1.5-1.6-1.3-1.3
Reaction time trials correct on left1.11.61.8-1.3-1.3-1.3-1.3-1.31.3-1.3-1.31.21.21.20.8
Reaction time trials on left0.91.21.4-1.2-1.2-1.1-1.2-1.11.2-1.2-1.21.11.11.00.7
Reaction time mean0.60.81.10.91.01.00.91.0-0.91.10.9-0.9-0.9-0.8-0.6
Reaction time mean AUC0.30.40.60.70.70.70.70.7-0.70.80.7-0.6-0.6-0.6-0.3
Median of all reaction times0.00.00.10.00.10.10.00.1-0.00.20.0-0.00.00.00.4
Reaction time omissions7.710.511.13.33.33.33.33.3-3.33.23.3-3.1-3.1-3.1-3.1
Reaction time false alarm rate1.72.43.01.61.61.61.61.6-1.51.71.6-1.6-1.7-1.4-1.1
Reaction time premature initiation rate4.56.06.62.62.52.52.52.5-2.52.22.6-2.4-2.1-2.5-2.5
Reaction time premature initiations1.92.73.71.71.71.71.71.7-1.71.31.7-1.6-1.3-1.7-1.9
Std. dev. reaction times4.86.77.72.62.62.62.62.6-2.62.82.5-2.5-2.7-2.5-2.4
Reaction time trials completed0.91.21.4-1.2-1.2-1.1-1.2-1.11.2-1.2-1.21.11.11.00.7
Reaction time trials AUC1.42.12.3-1.5-1.5-1.5-1.5-1.51.5-1.5-1.51.41.41.31.0
Run reversals in cocaine runway, females0.50.50.9-0.7-0.6-0.6-0.7-0.60.7-0.9-0.60.70.60.70.8
Run reversals in cocaine runway, males1.01.01.81.00.90.91.00.9-0.91.01.1-0.8-1.4-1.2-0.4
Latency to leave start box in cocaine runway0.00.00.1-0.20.00.0-0.20.00.2-0.1-0.2-0.10.3-0.2-0.3
Latency to leave start box in cocaine runway, F1.51.62.11.31.31.31.21.3-1.21.21.2-1.3-0.8-1.4-1.4
Latency to leave start box in cocaine runway, M2.32.22.6-1.6-1.6-1.6-1.6-1.61.6-1.4-1.51.51.31.41.3
Std. dev. time between licks in bursts1.31.62.41.21.31.31.21.3-1.21.31.2-1.1-1.1-1.3-1.6
Total sessions with >9 infusions1.41.51.71.21.31.31.21.3-1.21.31.2-1.3-1.2-0.9-1.2
Short access day 1 total inactive lever presses1.11.21.41.11.21.21.11.2-1.11.21.0-1.2-1.1-1.0-1.2
Short access day 10 total inactive lever presses0.10.10.1-0.3-0.2-0.2-0.3-0.20.3-0.2-0.30.30.20.20.3
Short access day 1 total infusions0.50.60.80.70.80.80.70.8-0.70.80.7-0.9-0.7-0.6-0.9
Short access day 10 total infusions2.73.03.21.81.81.81.81.8-1.71.71.8-1.7-1.6-1.6-1.6
Short access total infusions1.71.92.01.41.41.41.41.4-1.41.31.4-1.4-1.3-1.2-1.4
Short access day 1 locomotion0.20.20.30.50.50.50.40.5-0.40.50.5-0.5-0.5-0.4-0.3
Short access day 10 total locomotion0.20.20.40.60.40.40.50.4-0.50.40.7-0.5-0.5-0.3-0.5
Short access total locomotion0.60.60.90.90.80.80.80.8-0.80.71.0-0.7-0.8-0.6-0.7
One hour access (0.3 mA shock)0.10.10.2-0.2-0.2-0.2-0.2-0.20.2-0.4-0.20.20.20.40.4
Compulsive drug intake2.02.02.4-1.5-1.4-1.4-1.4-1.41.4-1.5-1.51.31.31.41.5
One hour access (shock baseline)0.00.00.0-0.00.00.0-0.00.00.0-0.10.00.10.00.2-0.0
Social response proportion0.10.10.20.30.30.30.30.3-0.30.10.3-0.3-0.1-0.4-0.1
Social responses5.06.47.22.52.62.62.52.5-2.52.72.5-2.5-2.7-2.7-2.2
Social time0.30.41.0-0.6-0.6-0.6-0.6-0.60.6-0.7-0.60.50.80.61.0
Soleus weight1.03.03.3-1.8-1.7-1.7-1.8-1.71.8-1.8-1.81.81.71.81.6
Bone: stiffness18.028.530.2-5.5-5.4-5.4-5.5-5.45.5-5.4-5.45.35.45.24.5
Tibialis anterior weight3.010.111.3-3.1-3.2-3.2-3.1-3.23.1-3.4-3.03.23.03.33.2
Time to tail flick, vehicle, before self-admin0.70.70.80.90.80.80.90.8-0.90.70.9-0.8-0.7-0.7-0.8
Time to tail flick, vehicle, after self-admin0.60.61.1-0.7-0.8-0.8-0.7-0.80.7-1.0-0.70.70.90.70.7
Time to tail flick, test, before self-admin0.10.10.20.40.40.40.40.4-0.40.10.4-0.3-0.1-0.3-0.3
Time to tail flick, test, after self-admin0.80.91.2-0.9-0.9-0.9-0.9-0.90.8-1.0-0.90.91.11.00.9
Delta time to tail flick, vehicle, before/after SA0.70.70.9-0.8-0.9-0.9-0.8-0.90.8-1.0-0.80.80.80.70.8
Delta time to tail flick, test, before/after SA0.80.70.8-0.9-0.9-0.9-0.9-0.90.9-0.7-0.80.90.60.80.8
Tibia length4.111.612.9-3.5-3.6-3.6-3.5-3.63.5-3.4-3.43.43.53.32.7
Ambulatory time before self-admin4.34.44.72.22.12.12.22.1-2.22.12.2-2.0-1.9-2.0-2.1
Ambulatory time after self-admin1.71.82.51.31.41.41.31.4-1.31.61.3-1.2-1.5-1.2-1.2
Bone: tissue strength2.12.12.4-1.5-1.4-1.4-1.5-1.41.5-1.5-1.51.41.51.41.3
Total heroin consumption1.21.41.9-1.2-1.2-1.2-1.2-1.21.2-1.3-1.31.01.41.10.8
Bone: trabecular number3.75.76.2-2.4-2.5-2.5-2.4-2.52.4-2.4-2.32.52.42.41.9
Bone: trabecular spacing1.11.42.31.11.21.21.11.2-1.11.41.1-1.2-1.5-1.2-0.7
Bone: trabecular thickness0.60.71.2-0.8-0.7-0.7-0.8-0.70.8-0.9-0.80.80.90.81.1
Bone: trabecular tissue density0.81.22.1-1.1-1.0-1.0-1.1-1.01.1-1.0-1.11.10.81.21.5
Water consumed over 24 hours0.10.10.20.20.30.30.20.3-0.20.30.2-0.4-0.3-0.4-0.2
Number of responses in last shaping day0.40.50.7-0.8-0.6-0.6-0.7-0.60.7-0.7-0.80.70.60.80.6