Fbln7

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Brain gene expression Fbln7 0.19 0.1 8.9e-16 0.16 0.16 0.16 0.17 3.9e-15 1.2e-14 7.3e-15 1.8e-15
2 NAcc gene expression Fbln7 0.1 0.06 4.7e-11 0.1 0.09 0.09 0.1 1.1e-11 1.8e-10 1.1e-10 3.7e-11
3 pVTA gene expression Fbln7 0.13 0.09 2.3e-04 0.1 0.06 0.11 0.01 3.8e-05 1.1e-03 1.9e-05 8.8e-02
4 IL gene expression Fbln7 0.32 0.17 4.8e-04 0.11 0.08 0.08 0.1 1.1e-03 6.1e-03 6.2e-03 2.1e-03
5 BLA gene expression Fbln7 0.22 0.14 1.8e-07 0.11 0.13 0.15 0.14 1.2e-06 3.0e-07 2.7e-08 1.1e-07

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4 5
Bone: apparent density2.13.44.4-2.12.11.71.61.8
Area under the delay curve0.50.50.70.7-0.6-0.5-0.8-0.7
BMI with tail0.92.84.8-1.71.22.21.61.6
BMI without tail3.36.810.3-2.62.03.22.72.4
Body weight5.020.827.3-4.83.95.24.54.2
Weight adjusted by age5.46.17.7-2.72.82.12.22.5
Bone surface1.32.33.2-1.61.81.31.31.5
Bone volume1.52.53.7-1.81.91.41.21.5
Breakpoint value in progressive ratio session0.70.81.4-0.70.41.11.20.7
Number of licking bursts0.30.40.7-0.60.30.50.80.7
Context. condit. distance diff. score2.02.44.4-1.72.10.81.21.6
Locomotion velocity, session 10.10.10.30.3-0.3-0.4-0.5-0.2
Locomotion distance, session 10.81.02.0-1.21.40.70.60.9
Locomotion velocity, session 20.30.30.60.4-0.6-0.1-0.5-0.8
Locomotion distance, session 22.23.14.5-2.12.11.51.11.8
Locomotion velocity, session 30.60.71.7-0.4-0.11.31.3-0.0
Locomotion distance, session 35.76.310.3-2.31.53.23.11.9
Stereotopy head waving bouts, day 31.41.63.41.0-0.2-1.8-1.8-0.9
Stereotopy head waving duration, day 31.51.82.81.3-0.8-1.7-1.5-1.2
Locomotion velocity, session 71.71.92.5-1.31.31.51.61.1
Locomotion distance, session 74.75.98.1-2.72.81.82.12.6
Stereotopy head waving bouts, day 70.10.10.30.2-0.50.30.1-0.5
Stereotopy head waving duration, day 70.60.71.40.9-1.2-0.2-0.5-1.0
Locomotion velocity, session 80.60.71.0-0.91.00.80.60.8
Locomotion distance, session 86.29.113.8-3.43.72.42.33.1
Degree of sensitization distance0.70.71.5-0.10.9-1.2-1.00.4
Degree of sensitization stereotypy0.50.61.7-0.5-0.21.31.00.1
Conditioned locomotion2.02.43.6-1.71.91.21.21.7
Cocaine response after cond. corrected0.10.10.30.2-0.0-0.5-0.5-0.2
Cocaine response after cond. not corrected0.30.30.70.4-0.3-0.6-0.8-0.5
Cocaine response before conditioning0.30.30.40.5-0.6-0.4-0.6-0.6
Saline control response3.74.95.7-2.32.12.42.41.9
Bone: connectivity density1.11.72.4-1.51.51.11.11.2
Bone: cortical apparent density0.00.10.1-0.0-0.20.30.10.3
Bone: cortical area2.33.54.5-2.11.82.11.71.6
Bone: cortical porosity1.81.94.01.5-2.0-0.2-0.6-1.7
Bone: cortical porosity0.91.02.40.9-1.60.40.1-1.2
Bone: cortical thickness0.50.71.2-1.00.71.10.50.9
Bone: cortical thickness0.10.10.3-0.20.00.50.10.0
Bone: cortical tissue density0.00.00.10.1-0.30.1-0.00.2
Condit. Reinf. active minus inactive responses0.40.40.6-0.70.40.70.60.8
Condit. Reinf. active-inactive response ratio0.91.01.4-1.11.00.80.91.2
Condit. Reinf. active responses0.10.10.3-0.50.20.50.10.4
Condit. Reinf. inactive responses0.10.10.5-0.00.1-0.2-0.7-0.1
Incentive salience index mean0.30.40.6-0.70.60.40.30.8
Condit. Reinf. lever presses0.10.10.2-0.40.50.3-0.10.3
Condit. Reinf. active minus inactive responses3.44.25.1-2.32.11.92.01.8
Condit. Reinf. active-inactive response ratio4.24.55.3-2.22.12.02.31.9
Condit. Reinf. active responses3.85.36.4-2.52.32.32.42.0
Condit. Reinf. inactive responses0.40.50.7-0.90.80.70.50.6
Condit. Reinf. lever presses1.21.72.3-1.41.01.51.51.0
Condit. Reinf. lever reinforcers received3.34.65.7-2.42.22.12.11.8
Conditioned reinforcement - actives0.80.81.3-0.90.80.90.71.1
Conditioned reinforcement - inactives3.33.77.0-2.32.61.30.62.1
Conditioned locomotion0.40.50.8-0.70.70.70.60.9
Patch foraging indifference point 0 sec0.20.20.7-0.70.9-0.00.00.2
Patch foraging indifference point AUC0.40.50.7-0.70.70.60.60.9
Delay disc. indifference point, 0s delay6.36.99.72.5-2.5-2.3-3.1-2.6
Delay disc. indifference point, 16s delay0.40.40.80.6-0.5-0.8-0.9-0.4
Delay disc. indifference point, 2s delay0.20.20.50.5-0.3-0.2-0.7-0.6
Delay disc. indifference point, 24s delay1.51.52.11.3-1.0-1.1-1.1-1.5
Delay disc. indifference point, 4s delay0.20.20.40.4-0.50.1-0.6-0.3
Delay disc. indifference point, 8s delay0.20.20.40.6-0.6-0.3-0.3-0.4
Indifference point function ln k0.30.40.8-0.80.90.50.30.3
Indifference point function log k0.30.40.8-0.80.90.50.30.3
Patch foraging total patch changes 0 sec0.20.30.9-0.71.0-0.0-0.00.3
Patch foraging total patch changes 12 sec0.00.00.20.1-0.20.00.1-0.4
Patch foraging total patch changes 18 sec0.30.41.20.30.1-1.1-0.8-0.5
Patch foraging total patch changes 24 sec0.50.71.70.00.7-1.3-1.10.1
Patch foraging total patch changes 6 sec0.71.12.0-1.21.40.50.61.1
Patch foraging time to switch 0 sec3.65.58.52.7-2.9-1.8-1.4-2.6
Patch foraging water rate 0 sec5.28.411.6-3.33.42.32.13.1
Patch foraging water rate 12 sec1.11.72.9-1.61.71.00.61.3
Patch foraging water rate 18 sec0.40.50.7-0.80.50.80.60.7
Patch foraging water rate 24 sec0.70.91.3-1.10.81.11.00.8
Patch foraging water rate 6 sec1.92.84.0-2.01.71.71.31.5
Seeking ratio, delayed vs. immediate footshock0.10.20.50.3-0.1-0.4-0.7-0.1
Distance traveled before self-admin5.65.97.5-2.62.72.12.32.4
Distance traveled after self-admin3.03.33.6-1.81.81.91.91.7
Extensor digitorum longus weight0.10.40.8-0.60.30.90.80.5
Bone: elastic displacement0.30.41.00.6-1.00.30.4-0.6
Bone: elastic work0.10.10.20.2-0.40.30.4-0.2
Bone: endosteal estimation0.91.92.9-1.41.41.41.70.9
Bone: endosteal perimeter2.14.35.1-2.22.12.02.31.7
Epididymis fat weight0.61.52.1-1.21.01.31.41.2
Delta time in closed arm before/after self-admin0.40.40.50.6-0.7-0.5-0.7-0.7
Delta time in open arm before/after self-admin1.51.51.9-1.31.41.11.11.1
Diff in mean of infusions in LGA sessions1.11.21.61.3-1.3-1.1-0.8-1.1
Delay discount exponential model param0.40.40.6-0.80.60.50.70.7
Extinction: sum of active levers before priming0.00.00.10.1-0.30.20.1-0.1
Active lever presses in extinction session 60.20.20.40.5-0.2-0.6-0.5-0.5
Bone: final force3.25.26.1-2.52.22.42.22.1
Bone: final moment2.54.14.9-2.21.92.22.01.8
Food consumed during 24 hour testing period0.30.30.90.5-0.2-0.9-0.6-0.4
Glucose0.30.50.7-0.70.80.70.80.5
Heart weight6.18.711.2-3.33.42.52.03.2
Delay discount hyperbolic model param0.40.40.5-0.70.60.40.70.7
Intermittent access intake day 1-15 change3.03.03.7-1.91.81.81.11.8
Intermittent access intake escalation2.42.42.9-1.71.61.61.01.7
Intermittent access intake escalation 20.70.70.9-0.90.90.80.40.9
Intermitt. access day 1 inactive lever presses1.51.62.5-1.51.61.10.71.3
Intermitt. access day 15 inactive lever presses1.21.33.3-1.31.80.30.21.2
Intermitt. access escalation Index0.90.81.51.0-1.2-0.4-0.6-1.1
Intermittent access day 1 total infusions0.20.20.30.5-0.5-0.5-0.5-0.2
Intermittent access day 15 total infusions1.11.31.9-1.21.21.10.51.4
Intermittent access terminal intake (last 3 days)1.01.12.0-1.21.30.70.21.4
Intermittent access total infusions0.30.40.7-0.60.80.2-0.20.8
Intermittent access day 1 locomotion0.40.50.8-0.60.60.40.80.9
Intermittent access day 15 total locomotion1.61.83.1-1.41.80.60.51.7
Intermittent access total locomotion1.41.52.5-1.31.50.80.81.6
Intermittent access standard deviation0.60.61.2-0.80.70.70.31.1
Left kidney weight0.92.64.6-1.92.21.21.01.5
Right kidney weight0.71.93.5-1.81.91.10.61.2
Cocaine induced anxiety3.54.19.82.1-1.3-3.1-1.3-1.6
Post-drug Anxiety1.51.74.01.4-1.0-2.0-0.7-1.0
Baseline Anxiety0.70.81.8-0.90.61.30.40.8
Tail length3.911.917.0-3.32.74.14.02.8
Length with tail3.512.814.8-3.83.53.83.53.2
Length without tail0.81.82.5-1.61.51.21.01.3
Times rat made contact with spout0.00.00.10.2-0.1-0.40.00.1
Lifetime Intake0.40.51.1-0.70.80.40.21.0
Liver weight, left0.40.71.6-0.91.3-0.0-0.01.0
Liver weight, right0.00.10.2-0.0-0.1-0.4-0.20.1
Locomotor activity0.60.91.7-0.80.71.31.30.4
Locomotor testing distance0.10.10.2-0.20.40.20.4-0.1
Locomotor testing rearing0.71.12.1-1.11.40.80.90.8
Locomotion in novel chamber0.60.71.7-0.50.50.81.30.8
Locomotion in novel chamber post-restriction1.01.22.9-0.70.51.41.70.6
Fecal boli incidents, locomotor time 10.10.10.30.3-0.50.10.3-0.4
Change in fecal boli incidents, locomotor task0.00.00.10.1-0.1-0.1-0.4-0.1
Time >=10cm from walls, locomotor time 10.20.20.6-0.3-0.10.80.30.4
Bouts of movement, locomotor time 15.86.38.72.4-2.6-2.2-3.0-2.4
Total resting periods, locomotor time 15.35.87.72.3-2.6-2.0-2.8-2.3
Rest time, locomotor task time 10.60.60.90.9-1.0-0.6-0.7-0.8
Distance moved, locomotor task time 10.00.00.1-0.10.20.10.10.3
Vertical activity count, locomotor time 10.30.30.4-0.50.60.40.60.7
Time >=10cm from walls, locomotor time 20.10.10.2-0.20.30.5-0.00.4
Bouts of movement, locomotor time 20.80.91.81.0-1.4-0.5-0.8-0.8
Total resting periods, locomotor time 20.70.82.00.9-1.4-0.3-0.7-0.8
Rest time, locomotor task time 20.40.51.10.7-1.1-0.3-0.4-0.6
Distance moved, locomotor task time 20.10.20.40.10.4-0.5-0.6-0.0
Vertical activity count, locomotor time 20.20.20.7-0.30.8-0.1-0.10.3
Light reinforcement 10.81.42.0-1.31.11.21.40.9
Light reinforcement 20.50.71.0-0.80.70.70.81.0
Bone: marrow area0.91.92.8-1.41.51.31.70.9
Bone: maximum diameter3.66.78.0-2.82.62.72.52.2
Bone: maximum force0.61.01.3-1.11.10.90.90.8
Bone: maximum moment0.30.40.6-0.80.80.60.60.5
Mean time between licks in bursts0.40.61.20.9-0.9-0.1-0.2-1.1
Mean num. licks in bursts0.40.50.90.6-0.2-0.8-0.9-0.5
Cd content in liver0.40.40.7-0.70.70.50.50.8
Co content in liver0.80.91.3-1.00.91.20.90.8
Cu content in liver1.11.32.4-1.00.81.61.30.8
Fe content in liver0.20.30.5-0.60.70.40.60.3
K content in liver0.10.10.20.1-0.10.5-0.0-0.3
Mg content in liver0.60.71.4-0.80.71.20.70.5
Mn content in liver1.01.12.3-1.00.71.51.20.7
Na content in liver0.20.20.40.3-0.2-0.4-0.5-0.7
Rb content in liver2.73.43.5-1.81.91.91.91.7
Se content in liver2.12.63.4-1.81.81.41.51.4
Sr content in liver0.80.81.1-0.80.91.10.80.7
Zn content in liver0.10.10.3-0.40.60.1-0.40.3
Bone: minimum diameter0.81.52.4-1.31.11.61.10.9
Time in familiar zone, hab. session 10.80.81.11.1-1.1-0.6-0.7-0.9
Time in novel zone, hab. session 11.11.11.9-1.21.40.20.51.3
Total zone transitions, hab. session 10.60.91.6-1.21.30.80.40.8
Total locomotion distance, hab. session 11.01.43.4-1.51.80.70.20.9
Locomotion velocity, hab. session 11.01.43.3-1.51.80.70.20.9
Time in familiar zone, hab. session 20.90.91.41.1-0.8-1.2-1.0-0.7
Time in novel zone, hab. session 21.01.01.4-1.10.81.21.00.8
Total zone transitions, hab. session 22.43.14.0-2.01.62.01.61.5
Total locomotion distance, hab. session 22.22.96.0-2.12.40.90.41.8
Locomotion velocity, hab. session 21.52.04.8-1.72.20.5-0.11.5
Novel to familiar place preference ratio0.10.10.2-0.10.4-0.4-0.40.2
Novelty place preference0.10.10.40.20.1-0.6-0.5-0.1
Time in novel zone, NPP test0.10.10.20.00.3-0.5-0.40.1
Total zone transitions, NPP test0.71.01.3-1.11.00.90.81.0
Total locomotion distance, NPP test2.33.26.4-2.12.50.90.61.9
Locomotion velocity, NPP test1.52.14.7-1.72.20.60.31.6
Intraocular pressure0.10.10.40.0-0.20.50.6-0.1
Delta distance traveled before/after self-admin0.10.20.40.5-0.6-0.0-0.1-0.4
Delta ambulatory time before/after self-admin2.93.14.11.9-2.0-1.4-1.6-1.8
Parametrial fat weight0.40.72.50.6-0.6-0.6-1.6-0.3
Pavlov. Cond. lever latency0.20.30.60.2-0.50.50.8-0.2
Pavlov. Cond. magazine entry latency0.60.81.4-1.01.20.50.11.1
Pavlov. Cond. change in total contacts0.40.40.8-0.70.90.20.10.8
Pavlov. Cond. index score0.20.20.4-0.40.6-0.1-0.40.6
Pavlov. Cond. latency score0.30.30.5-0.40.7-0.4-0.70.6
Pavlov. Cond. lever contacts0.20.30.6-0.50.8-0.1-0.40.6
Pavlov. Cond. magazine entry number0.40.50.80.8-0.6-0.9-0.6-0.8
Pavlov. Cond. intertrial magazine entries0.20.20.5-0.40.40.70.50.4
Pavlov. Cond. lever-magazine prob. diff.0.10.10.3-0.30.5-0.1-0.30.5
Pavlov. Cond. response bias0.50.60.8-0.90.90.70.40.8
Pavlov. Cond. lever latency3.04.15.12.3-1.8-2.2-2.1-1.6
Pavlov. Cond. magazine entry latency0.10.10.2-0.30.30.30.40.2
Pavlov. Cond. change in total contacts1.62.23.3-1.51.11.81.81.1
Pavlov. Cond. index score2.02.63.8-1.71.31.91.91.2
Pavlov. Cond. latency score1.51.82.5-1.41.11.61.51.0
Pavlov. Cond. lever contacts2.93.94.9-2.21.82.22.01.6
Pavlov. Cond. magazine entry number0.60.71.20.8-0.6-1.1-1.1-0.6
Pavlov. Cond. intertrial magazine entries0.10.10.30.00.2-0.6-0.30.1
Pavlov. Cond. lever-magazine prob. diff.1.52.02.9-1.41.11.71.61.0
Pavlov. Cond. response bias3.14.35.4-2.21.82.32.21.7
Time in closed arm before self-admin0.70.81.20.9-0.9-0.8-0.6-1.1
Time in closed arm after self-admin2.22.23.31.6-1.8-1.0-1.1-1.7
Time in open arm before self-admin0.10.10.10.4-0.4-0.2-0.2-0.2
Time in open arm after self-admin1.01.02.1-1.21.50.60.70.9
Bone: periosteal estimation2.04.15.1-2.12.02.32.21.5
Bone: periosteal perimeter2.33.94.5-2.12.02.01.91.8
Bone: post-yield work1.01.31.81.1-0.9-1.1-1.1-1.3
Progressive ratio test 1 active lever presses2.52.73.5-1.61.51.61.61.9
Progressive ratio test 1 breakpoint2.93.04.0-1.81.51.71.72.0
Progressive ratio test 1 inactive lever presses1.31.52.6-1.41.60.90.51.3
Progressive ratio test 2 active lever presses0.60.61.1-0.81.00.4-0.60.9
Progressive ratio test 2 breakpoint0.40.40.6-0.60.80.3-0.80.7
Progressive ratio test 2 inactive lever presses2.22.54.3-1.82.11.00.71.9
Incentive Sensitization - Responses0.20.21.10.0-0.00.1-1.0-0.3
Incentive Sensitization - Breakpoint0.40.41.70.1-0.0-0.0-1.3-0.4
Sum of active levers in priming session hrs 5-60.30.30.5-0.60.70.30.50.5
Progressive ratio4.95.77.02.6-2.4-2.6-2.0-2.1
Food seeking constrained by brief footshock0.70.82.1-1.01.50.2-0.30.9
Seeking ratio, punishment vs. effort4.95.98.2-2.82.92.41.62.3
Retroperitoneal fat weight0.00.10.3-0.40.5-0.0-0.60.2
Reaction time number correct0.10.10.3-0.20.50.1-0.2-0.0
Reaction time mean minus median0.71.01.60.9-0.9-1.3-1.1-0.6
Reaction time mean minus median AUC0.20.30.70.5-0.4-0.9-0.6-0.0
Reaction time num false alarms2.63.54.8-2.22.21.61.51.8
Reaction time num false alarms AUC2.12.93.7-1.91.81.71.71.4
Reaction time trials correct on left0.10.10.3-0.20.50.1-0.2-0.0
Reaction time trials on left0.10.10.4-0.30.60.1-0.10.1
Reaction time mean0.10.20.3-0.30.20.40.50.5
Reaction time mean AUC0.10.10.3-0.20.10.30.50.5
Median of all reaction times0.40.61.0-0.60.60.81.00.8
Reaction time omissions0.60.81.5-0.90.90.60.61.2
Reaction time false alarm rate1.42.02.5-1.61.41.41.41.3
Reaction time premature initiation rate0.10.20.4-0.40.20.70.40.4
Reaction time premature initiations0.10.10.2-0.30.30.40.00.2
Std. dev. reaction times0.20.20.4-0.50.30.50.40.6
Reaction time trials completed0.10.10.4-0.30.60.1-0.10.1
Reaction time trials AUC0.10.10.3-0.30.50.1-0.1-0.0
Run reversals in cocaine runway, females1.21.21.6-1.31.20.91.10.9
Run reversals in cocaine runway, males1.91.82.4-1.51.31.30.91.5
Latency to leave start box in cocaine runway1.82.02.41.6-1.5-1.2-1.3-1.4
Latency to leave start box in cocaine runway, F3.13.44.82.0-2.2-1.4-1.5-1.9
Latency to leave start box in cocaine runway, M0.10.10.4-0.10.6-0.3-0.4-0.0
Std. dev. time between licks in bursts0.81.01.5-1.00.91.11.20.7
Total sessions with >9 infusions0.20.20.5-0.1-0.10.10.70.6
Short access day 1 total inactive lever presses0.30.30.5-0.70.60.50.30.7
Short access day 10 total inactive lever presses0.91.03.30.10.6-1.2-1.8-0.3
Short access day 1 total infusions0.00.00.1-0.0-0.0-0.00.20.3
Short access day 10 total infusions0.00.00.10.1-0.1-0.1-0.30.2
Short access total infusions0.10.10.5-0.20.10.10.30.7
Short access day 1 locomotion0.10.10.30.2-0.0-0.6-0.20.3
Short access day 10 total locomotion1.41.62.9-1.10.91.21.71.3
Short access total locomotion1.01.11.8-0.80.90.61.31.3
One hour access (0.3 mA shock)1.01.11.7-1.21.31.00.11.2
Compulsive drug intake1.11.11.71.3-1.3-0.8-0.5-1.2
One hour access (shock baseline)0.40.50.7-0.80.80.5-0.40.8
Social response proportion0.40.40.7-0.80.80.40.30.6
Social responses1.51.92.8-1.51.21.71.51.0
Social time0.00.10.2-0.2-0.10.40.30.1
Soleus weight0.20.71.1-0.81.10.70.70.7
Bone: stiffness1.11.72.3-1.51.51.21.11.3
Tibialis anterior weight1.34.45.5-2.11.72.42.22.0
Time to tail flick, vehicle, before self-admin0.30.30.60.00.5-0.8-0.8-0.1
Time to tail flick, vehicle, after self-admin0.00.00.10.1-0.10.10.30.2
Time to tail flick, test, before self-admin0.40.40.7-0.50.20.80.90.5
Time to tail flick, test, after self-admin1.21.22.00.9-0.4-1.3-1.4-1.2
Delta time to tail flick, vehicle, before/after SA1.31.32.0-1.00.61.41.41.1
Delta time to tail flick, test, before/after SA0.70.71.30.50.1-1.2-1.1-0.7
Tibia length2.46.814.0-2.00.93.73.71.3
Ambulatory time before self-admin4.04.24.6-2.02.21.92.12.0
Ambulatory time after self-admin1.21.32.0-1.00.91.41.40.9
Bone: tissue strength0.40.40.7-0.70.80.30.20.8
Total heroin consumption1.61.83.1-1.31.21.21.81.2
Bone: trabecular number2.74.25.3-2.32.22.01.81.8
Bone: trabecular spacing0.40.51.00.6-0.7-0.8-1.0-0.4
Bone: trabecular thickness0.70.81.0-1.01.00.80.90.9
Bone: trabecular tissue density1.42.03.4-1.51.60.91.01.9
Water consumed over 24 hours0.00.00.10.1-0.2-0.00.3-0.0
Number of responses in last shaping day0.00.00.00.2-0.2-0.1-0.1-0.0