Eps8l1

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 NAcc gene expression Eps8l1 0.09 0.06 3.9e-16 0.11 0.11 0.1 0.11 7.1e-16 9.8e-16 1.3e-15 1.1e-15
2 NAcc alternative TSS NM_001108467.1 0.02 0.02 2.6e-04 0.02 0.02 0.02 0.02 1.2e-03 1.5e-04 4.6e-04 4.7e-04
3 NAcc alternative TSS NM_001108467.1 0.03 0.02 1.3e-05 0.02 0.03 0.03 0.03 4.9e-04 9.1e-06 2.5e-05 3.2e-05

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
Bone: apparent density0.10.10.1-0.3-0.4-0.4
Area under the delay curve0.20.40.40.70.60.6
BMI with tail0.61.92.11.31.41.4
BMI without tail0.00.10.3-0.5-0.2-0.2
Body weight1.14.85.8-2.4-2.1-2.0
Weight adjusted by age0.41.01.3-0.8-1.1-1.1
Bone surface2.95.66.1-2.5-2.3-2.3
Bone volume2.24.34.6-2.1-2.1-2.0
Breakpoint value in progressive ratio session0.20.40.50.70.70.6
Number of licking bursts0.00.10.10.30.30.3
Context. condit. distance diff. score0.10.10.10.40.20.2
Locomotion velocity, session 10.20.20.20.4-0.4-0.5
Locomotion distance, session 12.53.23.9-1.4-1.9-2.0
Locomotion velocity, session 20.10.10.30.60.0-0.0
Locomotion distance, session 21.92.73.0-1.5-1.7-1.7
Locomotion velocity, session 30.00.00.10.30.10.1
Locomotion distance, session 30.20.30.4-0.3-0.6-0.6
Stereotopy head waving bouts, day 30.10.10.20.30.40.4
Stereotopy head waving duration, day 30.10.10.20.30.40.4
Locomotion velocity, session 70.10.10.1-0.1-0.3-0.3
Locomotion distance, session 70.00.00.10.1-0.2-0.3
Stereotopy head waving bouts, day 70.10.10.2-0.5-0.3-0.3
Stereotopy head waving duration, day 70.10.10.2-0.5-0.3-0.3
Locomotion velocity, session 80.00.00.10.3-0.1-0.2
Locomotion distance, session 80.20.30.4-0.3-0.6-0.6
Degree of sensitization distance0.00.00.0-0.1-0.0-0.0
Degree of sensitization stereotypy0.00.00.0-0.2-0.0-0.0
Conditioned locomotion0.10.10.10.1-0.3-0.3
Cocaine response after cond. corrected1.62.42.81.31.61.7
Cocaine response after cond. not corrected0.00.00.1-0.30.00.1
Cocaine response before conditioning8.19.89.8-3.1-3.1-3.1
Saline control response0.10.20.20.2-0.4-0.5
Bone: connectivity density0.00.10.10.30.20.2
Bone: cortical apparent density0.00.10.10.0-0.3-0.4
Bone: cortical area0.91.41.6-1.3-1.2-1.2
Bone: cortical porosity0.70.70.80.80.90.9
Bone: cortical porosity0.20.20.30.30.50.6
Bone: cortical thickness0.30.50.70.80.60.6
Bone: cortical thickness0.10.10.2-0.2-0.4-0.5
Bone: cortical tissue density0.00.10.10.0-0.3-0.3
Condit. Reinf. active minus inactive responses0.20.30.30.50.50.5
Condit. Reinf. active-inactive response ratio1.82.02.01.41.41.4
Condit. Reinf. active responses0.10.10.1-0.3-0.3-0.3
Condit. Reinf. inactive responses3.24.14.2-2.0-2.1-2.1
Incentive salience index mean0.00.10.1-0.2-0.3-0.3
Condit. Reinf. lever presses0.71.11.1-1.0-1.1-1.1
Condit. Reinf. active minus inactive responses3.65.55.6-2.4-2.4-2.3
Condit. Reinf. active-inactive response ratio4.36.88.1-2.8-2.5-2.5
Condit. Reinf. active responses3.44.95.2-2.1-2.3-2.3
Condit. Reinf. inactive responses0.00.00.10.0-0.3-0.3
Condit. Reinf. lever presses0.40.61.1-1.1-0.7-0.6
Condit. Reinf. lever reinforcers received4.56.36.5-2.4-2.5-2.6
Conditioned reinforcement - actives0.00.20.2-0.5-0.4-0.4
Conditioned reinforcement - inactives1.33.63.7-1.9-1.9-1.9
Conditioned locomotion0.00.10.1-0.3-0.2-0.2
Patch foraging indifference point 0 sec0.20.50.90.90.50.5
Patch foraging indifference point AUC0.40.91.00.91.01.0
Delay disc. indifference point, 0s delay0.10.10.10.3-0.2-0.3
Delay disc. indifference point, 16s delay0.71.01.40.61.11.2
Delay disc. indifference point, 2s delay0.50.50.80.90.60.6
Delay disc. indifference point, 24s delay0.50.81.00.71.01.0
Delay disc. indifference point, 4s delay0.10.10.1-0.3-0.2-0.2
Delay disc. indifference point, 8s delay0.00.10.10.30.20.2
Indifference point function ln k2.98.99.7-2.7-3.1-3.1
Indifference point function log k2.98.99.7-2.7-3.1-3.1
Patch foraging total patch changes 0 sec0.10.40.80.90.50.4
Patch foraging total patch changes 12 sec0.30.40.50.60.70.7
Patch foraging total patch changes 18 sec0.30.81.01.00.80.8
Patch foraging total patch changes 24 sec0.00.00.1-0.20.20.3
Patch foraging total patch changes 6 sec0.91.51.51.21.21.2
Patch foraging time to switch 0 sec1.34.96.41.52.42.5
Patch foraging water rate 0 sec0.31.11.5-0.7-1.2-1.2
Patch foraging water rate 12 sec1.04.25.1-1.7-2.2-2.3
Patch foraging water rate 18 sec0.71.72.1-0.9-1.4-1.5
Patch foraging water rate 24 sec1.01.41.7-1.0-1.3-1.3
Patch foraging water rate 6 sec6.29.19.4-3.1-3.0-3.0
Seeking ratio, delayed vs. immediate footshock0.10.20.30.1-0.5-0.6
Distance traveled before self-admin1.43.14.3-1.1-2.0-2.1
Distance traveled after self-admin0.10.20.70.80.10.0
Extensor digitorum longus weight0.20.81.2-1.1-0.8-0.7
Bone: elastic displacement0.30.40.50.70.60.6
Bone: elastic work0.50.70.8-0.8-0.9-0.9
Bone: endosteal estimation2.86.88.2-2.9-2.5-2.4
Bone: endosteal perimeter1.84.45.0-2.2-2.0-2.0
Epididymis fat weight0.00.20.2-0.30.40.5
Delta time in closed arm before/after self-admin0.10.10.10.30.30.3
Delta time in open arm before/after self-admin1.61.92.2-1.2-1.5-1.5
Diff in mean of infusions in LGA sessions0.10.10.20.0-0.4-0.4
Delay discount exponential model param0.20.20.3-0.5-0.5-0.5
Extinction: sum of active levers before priming0.00.00.10.30.20.1
Active lever presses in extinction session 60.20.20.40.00.50.6
Bone: final force2.43.94.3-2.1-2.0-1.9
Bone: final moment3.15.15.3-2.3-2.2-2.2
Food consumed during 24 hour testing period1.32.52.7-1.6-1.6-1.6
Glucose1.52.43.11.71.51.4
Heart weight1.22.02.7-1.6-1.3-1.3
Delay discount hyperbolic model param0.20.30.4-0.6-0.5-0.5
Intermittent access intake day 1-15 change0.21.01.1-1.1-1.0-1.0
Intermittent access intake escalation0.31.72.0-1.4-1.2-1.2
Intermittent access intake escalation 20.10.30.3-0.3-0.6-0.6
Intermitt. access day 1 inactive lever presses0.22.03.0-1.7-1.3-1.2
Intermitt. access day 15 inactive lever presses0.63.14.2-2.1-1.6-1.6
Intermitt. access escalation Index0.20.60.70.80.70.7
Intermittent access day 1 total infusions0.20.50.7-0.8-0.7-0.6
Intermittent access day 15 total infusions0.51.21.7-1.3-1.0-1.0
Intermittent access terminal intake (last 3 days)0.61.11.4-1.2-1.0-1.0
Intermittent access total infusions1.41.62.0-1.4-1.2-1.2
Intermittent access day 1 locomotion0.81.51.8-1.3-1.2-1.1
Intermittent access day 15 total locomotion0.62.42.7-1.3-1.6-1.6
Intermittent access total locomotion3.54.24.2-2.1-2.0-2.0
Intermittent access standard deviation0.00.20.40.60.40.4
Left kidney weight3.226.028.6-5.3-5.0-4.9
Right kidney weight3.524.127.5-5.2-4.8-4.7
Cocaine induced anxiety0.51.31.3-1.1-1.1-1.1
Post-drug Anxiety0.40.40.7-0.9-0.6-0.5
Baseline Anxiety0.50.80.90.81.01.0
Tail length2.413.013.8-3.7-3.6-3.5
Length with tail3.013.115.1-3.9-3.5-3.4
Length without tail0.73.85.3-2.3-1.8-1.7
Times rat made contact with spout0.10.10.10.20.30.4
Lifetime Intake0.91.11.4-1.2-1.0-0.9
Liver weight, left1.01.82.1-1.4-1.3-1.3
Liver weight, right0.00.00.0-0.2-0.1-0.1
Locomotor activity0.10.10.20.20.40.4
Locomotor testing distance0.00.00.1-0.30.10.1
Locomotor testing rearing0.20.70.9-0.9-0.7-0.7
Locomotion in novel chamber1.21.62.21.51.11.1
Locomotion in novel chamber post-restriction0.30.91.01.01.01.0
Fecal boli incidents, locomotor time 10.20.40.5-0.6-0.7-0.7
Change in fecal boli incidents, locomotor task2.93.03.51.91.71.7
Time >=10cm from walls, locomotor time 10.00.00.10.10.30.3
Bouts of movement, locomotor time 10.50.61.0-0.3-0.9-1.0
Total resting periods, locomotor time 10.10.10.10.1-0.3-0.4
Rest time, locomotor task time 11.01.61.9-1.4-1.2-1.2
Distance moved, locomotor task time 10.61.72.11.41.31.2
Vertical activity count, locomotor time 10.42.94.62.21.51.4
Time >=10cm from walls, locomotor time 20.41.11.20.91.11.1
Bouts of movement, locomotor time 20.00.00.0-0.2-0.1-0.1
Total resting periods, locomotor time 20.00.00.0-0.2-0.2-0.2
Rest time, locomotor task time 20.00.10.1-0.0-0.3-0.3
Distance moved, locomotor task time 20.10.20.20.50.40.4
Vertical activity count, locomotor time 20.10.20.30.50.30.3
Light reinforcement 10.00.10.30.6-0.1-0.2
Light reinforcement 20.92.02.91.71.31.2
Bone: marrow area2.86.88.3-2.9-2.5-2.4
Bone: maximum diameter1.02.02.6-1.6-1.3-1.3
Bone: maximum force3.06.07.0-2.6-2.4-2.3
Bone: maximum moment3.77.07.8-2.8-2.6-2.6
Mean time between licks in bursts0.10.60.91.00.70.6
Mean num. licks in bursts0.00.10.2-0.4-0.2-0.2
Cd content in liver2.42.72.8-1.6-1.7-1.7
Co content in liver1.01.21.6-0.7-1.2-1.3
Cu content in liver0.91.01.0-1.0-1.0-1.0
Fe content in liver0.30.30.4-0.6-0.6-0.6
K content in liver0.00.00.00.10.00.0
Mg content in liver0.20.20.20.30.40.5
Mn content in liver0.00.10.10.10.30.3
Na content in liver3.23.64.12.01.81.8
Rb content in liver2.42.83.4-1.8-1.6-1.5
Se content in liver2.42.93.21.51.81.8
Sr content in liver5.54.77.02.61.91.8
Zn content in liver0.60.71.00.60.91.0
Bone: minimum diameter3.56.77.2-2.7-2.6-2.5
Time in familiar zone, hab. session 13.84.24.7-1.8-2.1-2.2
Time in novel zone, hab. session 12.93.23.31.81.81.8
Total zone transitions, hab. session 10.81.21.7-0.5-1.2-1.3
Total locomotion distance, hab. session 10.30.40.6-0.2-0.7-0.8
Locomotion velocity, hab. session 10.20.30.4-0.1-0.6-0.7
Time in familiar zone, hab. session 22.73.14.2-2.0-1.6-1.6
Time in novel zone, hab. session 21.92.12.61.61.41.4
Total zone transitions, hab. session 22.53.23.7-1.5-1.9-1.9
Total locomotion distance, hab. session 20.10.10.20.0-0.3-0.4
Locomotion velocity, hab. session 20.00.10.10.2-0.2-0.3
Novel to familiar place preference ratio0.00.00.0-0.2-0.1-0.1
Novelty place preference0.10.10.2-0.4-0.3-0.3
Time in novel zone, NPP test0.10.20.2-0.5-0.4-0.3
Total zone transitions, NPP test0.30.50.6-0.5-0.8-0.8
Total locomotion distance, NPP test0.30.40.4-0.6-0.7-0.7
Locomotion velocity, NPP test0.40.50.6-0.6-0.7-0.8
Intraocular pressure0.00.00.10.30.10.1
Delta distance traveled before/after self-admin2.42.62.71.61.61.6
Delta ambulatory time before/after self-admin1.11.91.91.41.41.4
Parametrial fat weight1.94.64.62.12.12.1
Pavlov. Cond. lever latency0.10.10.20.40.30.3
Pavlov. Cond. magazine entry latency0.81.01.20.91.11.1
Pavlov. Cond. change in total contacts0.20.30.30.60.50.5
Pavlov. Cond. index score0.30.40.40.60.60.6
Pavlov. Cond. latency score0.20.20.30.40.50.5
Pavlov. Cond. lever contacts0.10.10.2-0.5-0.2-0.2
Pavlov. Cond. magazine entry number0.30.30.4-0.5-0.6-0.6
Pavlov. Cond. intertrial magazine entries0.10.10.10.4-0.2-0.3
Pavlov. Cond. lever-magazine prob. diff.0.30.40.40.60.60.6
Pavlov. Cond. response bias0.00.10.10.00.30.3
Pavlov. Cond. lever latency0.30.40.5-0.7-0.6-0.6
Pavlov. Cond. magazine entry latency0.81.21.30.91.11.1
Pavlov. Cond. change in total contacts0.10.20.2-0.2-0.4-0.5
Pavlov. Cond. index score0.10.10.10.30.30.3
Pavlov. Cond. latency score0.40.60.60.70.80.8
Pavlov. Cond. lever contacts0.10.10.10.40.30.3
Pavlov. Cond. magazine entry number0.50.60.7-0.8-0.8-0.8
Pavlov. Cond. intertrial magazine entries2.34.95.0-2.2-2.2-2.2
Pavlov. Cond. lever-magazine prob. diff.0.10.20.20.40.40.4
Pavlov. Cond. response bias0.10.10.1-0.4-0.3-0.3
Time in closed arm before self-admin0.61.11.1-1.0-1.0-1.0
Time in closed arm after self-admin0.00.00.1-0.3-0.1-0.0
Time in open arm before self-admin2.22.72.81.71.61.6
Time in open arm after self-admin0.10.10.30.60.20.2
Bone: periosteal estimation2.25.26.0-2.4-2.2-2.2
Bone: periosteal perimeter1.83.53.8-2.0-1.9-1.8
Bone: post-yield work2.64.55.8-2.4-2.0-1.9
Progressive ratio test 1 active lever presses0.61.01.2-0.8-1.1-1.1
Progressive ratio test 1 breakpoint0.61.01.1-0.8-1.0-1.1
Progressive ratio test 1 inactive lever presses1.54.04.2-2.1-2.0-2.0
Progressive ratio test 2 active lever presses0.30.50.7-0.8-0.6-0.6
Progressive ratio test 2 breakpoint0.50.60.9-0.9-0.7-0.6
Progressive ratio test 2 inactive lever presses1.54.64.8-2.2-2.2-2.1
Incentive Sensitization - Responses0.61.52.3-1.5-1.1-1.0
Incentive Sensitization - Breakpoint0.41.01.5-1.2-0.8-0.8
Sum of active levers in priming session hrs 5-60.00.00.00.2-0.1-0.1
Progressive ratio0.00.00.0-0.1-0.1-0.2
Food seeking constrained by brief footshock0.60.81.30.2-1.0-1.1
Seeking ratio, punishment vs. effort0.40.81.1-0.6-1.0-1.0
Retroperitoneal fat weight4.520.121.94.14.64.7
Reaction time number correct0.00.10.20.40.40.3
Reaction time mean minus median0.00.00.0-0.0-0.1-0.1
Reaction time mean minus median AUC0.00.00.00.00.10.1
Reaction time num false alarms0.00.00.00.2-0.1-0.1
Reaction time num false alarms AUC0.10.20.60.70.20.2
Reaction time trials correct on left0.00.10.20.40.40.3
Reaction time trials on left0.00.10.20.40.30.3
Reaction time mean0.40.81.1-1.1-0.8-0.8
Reaction time mean AUC0.10.20.4-0.7-0.4-0.3
Median of all reaction times0.50.71.1-1.1-0.8-0.7
Reaction time omissions0.00.00.10.3-0.0-0.1
Reaction time false alarm rate0.00.10.20.4-0.0-0.0
Reaction time premature initiation rate0.00.00.0-0.2-0.1-0.0
Reaction time premature initiations0.00.10.10.10.30.3
Std. dev. reaction times0.20.50.7-0.8-0.7-0.7
Reaction time trials completed0.00.10.20.40.30.3
Reaction time trials AUC0.00.10.10.30.30.3
Run reversals in cocaine runway, females0.20.20.4-0.6-0.3-0.3
Run reversals in cocaine runway, males0.00.00.0-0.2-0.0-0.0
Latency to leave start box in cocaine runway0.40.50.5-0.7-0.7-0.7
Latency to leave start box in cocaine runway, F0.00.10.1-0.3-0.2-0.2
Latency to leave start box in cocaine runway, M1.41.31.5-1.0-1.2-1.2
Std. dev. time between licks in bursts0.10.10.30.5-0.0-0.1
Total sessions with >9 infusions1.01.21.4-1.0-1.2-1.2
Short access day 1 total inactive lever presses0.40.81.2-1.1-0.8-0.7
Short access day 10 total inactive lever presses0.00.20.3-0.5-0.5-0.5
Short access day 1 total infusions0.00.00.0-0.0-0.1-0.1
Short access day 10 total infusions0.00.00.00.10.10.1
Short access total infusions0.00.10.10.30.20.2
Short access day 1 locomotion0.20.40.5-0.7-0.6-0.5
Short access day 10 total locomotion0.31.41.8-0.8-1.3-1.3
Short access total locomotion0.30.50.8-0.3-0.8-0.9
One hour access (0.3 mA shock)4.24.95.4-2.3-2.2-2.1
Compulsive drug intake1.82.62.9-1.7-1.6-1.5
One hour access (shock baseline)0.10.20.4-0.7-0.3-0.3
Social response proportion0.60.71.2-1.1-0.7-0.7
Social responses2.83.74.2-2.0-1.9-1.9
Social time3.45.46.1-2.0-2.4-2.5
Soleus weight0.00.10.1-0.3-0.3-0.3
Bone: stiffness2.64.75.2-2.3-2.1-2.1
Tibialis anterior weight0.82.73.21.41.71.8
Time to tail flick, vehicle, before self-admin0.50.60.7-0.6-0.8-0.9
Time to tail flick, vehicle, after self-admin0.20.30.7-0.8-0.4-0.4
Time to tail flick, test, before self-admin0.10.10.20.5-0.2-0.2
Time to tail flick, test, after self-admin0.30.30.40.50.60.6
Delta time to tail flick, vehicle, before/after SA0.10.10.20.00.40.5
Delta time to tail flick, test, before/after SA0.00.10.1-0.40.10.1
Tibia length3.710.312.3-3.5-3.1-3.0
Ambulatory time before self-admin0.92.63.4-1.1-1.8-1.9
Ambulatory time after self-admin0.10.20.40.2-0.5-0.6
Bone: tissue strength0.30.30.5-0.3-0.7-0.7
Total heroin consumption0.00.00.00.10.10.0
Bone: trabecular number0.10.20.30.50.40.4
Bone: trabecular spacing0.00.00.0-0.10.10.1
Bone: trabecular thickness0.00.00.0-0.0-0.0-0.0
Bone: trabecular tissue density0.71.31.50.91.21.2
Water consumed over 24 hours0.71.41.5-1.1-1.2-1.2
Number of responses in last shaping day0.00.00.0-0.00.20.2