Epm2aip1

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 IL gene expression Epm2aip1 0.13 0.1 7.0e-03 0.08 0.09 0.09 0.08 4.8e-03 3.0e-03 3.7e-03 6.5e-03
2 PL gene expression Epm2aip1 0.16 0.08 0.0e+00 0.16 0.16 0.17 0.17 9.8e-18 9.1e-18 2.2e-18 3.3e-18
3 OFC gene expression Epm2aip1 0.23 0.12 1.4e-04 0.15 0.08 0.12 0.11 1.7e-04 5.6e-03 1.1e-03 1.5e-03
4 BLA gene expression Epm2aip1 0.12 0.07 2.2e-07 0.11 0.13 0.12 0.11 1.9e-06 2.8e-07 7.5e-07 2.2e-06

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density0.00.10.1-0.30.2-0.10.3
Area under the delay curve2.42.63.61.5-1.6-1.41.9
BMI with tail0.82.65.2-1.31.12.3-1.6
BMI without tail2.04.15.7-1.91.82.4-1.8
Body weight7.430.832.2-5.55.45.7-5.6
Weight adjusted by age0.50.61.0-0.60.60.9-1.0
Bone surface0.10.10.20.2-0.2-0.40.3
Bone volume0.00.00.1-0.0-0.0-0.20.3
Breakpoint value in progressive ratio session0.10.10.1-0.30.3-0.40.1
Number of licking bursts0.10.10.20.4-0.4-0.1-0.1
Context. condit. distance diff. score0.10.10.2-0.10.1-0.5-0.2
Locomotion velocity, session 10.00.10.10.2-0.2-0.00.4
Locomotion distance, session 10.70.91.4-1.21.10.8-0.5
Locomotion velocity, session 20.20.20.30.4-0.4-0.50.5
Locomotion distance, session 20.10.10.3-0.10.10.20.6
Locomotion velocity, session 30.10.10.2-0.40.40.40.2
Locomotion distance, session 30.80.91.80.7-0.8-0.81.3
Stereotopy head waving bouts, day 30.30.41.2-0.10.20.5-1.1
Stereotopy head waving duration, day 30.50.61.2-0.40.50.8-1.1
Locomotion velocity, session 70.30.30.4-0.70.60.60.1
Locomotion distance, session 70.60.71.60.7-0.8-0.51.2
Stereotopy head waving bouts, day 70.30.30.70.3-0.4-0.50.8
Stereotopy head waving duration, day 70.10.10.2-0.50.40.2-0.0
Locomotion velocity, session 80.30.30.6-0.80.70.3-0.3
Locomotion distance, session 80.20.30.6-0.80.70.40.1
Degree of sensitization distance1.01.01.2-1.01.01.0-1.1
Degree of sensitization stereotypy0.20.30.80.1-0.1-0.50.9
Conditioned locomotion3.43.94.41.9-1.9-2.02.1
Cocaine response after cond. corrected0.70.71.6-0.40.31.3-1.0
Cocaine response after cond. not corrected2.42.73.9-1.31.32.0-1.9
Cocaine response before conditioning1.01.21.7-1.31.30.7-1.0
Saline control response1.11.41.9-1.41.31.2-0.8
Bone: connectivity density0.50.71.20.6-0.6-1.01.1
Bone: cortical apparent density0.71.02.40.6-0.6-1.50.9
Bone: cortical area0.10.20.50.3-0.3-0.7-0.3
Bone: cortical porosity0.30.31.00.2-0.2-0.41.0
Bone: cortical porosity0.40.51.20.5-0.5-0.51.1
Bone: cortical thickness0.20.41.1-0.50.5-0.2-1.1
Bone: cortical thickness0.00.00.0-0.10.1-0.1-0.1
Bone: cortical tissue density0.81.02.50.6-0.6-1.60.9
Condit. Reinf. active minus inactive responses0.10.10.2-0.20.30.2-0.4
Condit. Reinf. active-inactive response ratio0.30.30.5-0.40.40.5-0.7
Condit. Reinf. active responses0.00.00.10.3-0.3-0.10.2
Condit. Reinf. inactive responses0.70.91.20.9-1.0-0.71.1
Incentive salience index mean0.00.10.10.3-0.3-0.10.2
Condit. Reinf. lever presses1.31.82.11.4-1.4-1.11.4
Condit. Reinf. active minus inactive responses2.32.93.3-1.81.71.5-1.8
Condit. Reinf. active-inactive response ratio2.12.23.1-1.31.21.8-1.6
Condit. Reinf. active responses1.92.63.1-1.61.61.4-1.8
Condit. Reinf. inactive responses0.10.10.30.1-0.0-0.6-0.0
Condit. Reinf. lever presses2.43.33.9-2.01.91.5-1.9
Condit. Reinf. lever reinforcers received2.13.03.5-1.81.81.4-1.9
Conditioned reinforcement - actives0.30.30.90.3-0.3-1.00.3
Conditioned reinforcement - inactives0.70.81.31.0-1.0-1.10.2
Conditioned locomotion0.50.60.90.6-0.6-0.80.9
Patch foraging indifference point 0 sec0.91.52.1-1.51.41.0-0.9
Patch foraging indifference point AUC0.10.20.3-0.40.2-0.40.5
Delay disc. indifference point, 0s delay0.00.00.10.1-0.20.20.2
Delay disc. indifference point, 16s delay1.21.21.71.0-1.0-0.91.3
Delay disc. indifference point, 2s delay0.40.40.50.6-0.6-0.60.7
Delay disc. indifference point, 24s delay1.11.01.21.0-1.0-1.01.1
Delay disc. indifference point, 4s delay2.42.52.81.5-1.6-1.61.7
Delay disc. indifference point, 8s delay2.22.33.21.5-1.5-1.21.8
Indifference point function ln k0.00.10.10.3-0.30.2-0.1
Indifference point function log k0.00.10.10.3-0.30.2-0.1
Patch foraging total patch changes 0 sec1.22.02.5-1.61.61.2-1.2
Patch foraging total patch changes 12 sec0.50.61.1-1.01.0-0.2-0.6
Patch foraging total patch changes 18 sec2.22.94.4-2.12.10.9-1.4
Patch foraging total patch changes 24 sec2.53.13.9-2.01.91.3-1.7
Patch foraging total patch changes 6 sec0.10.10.2-0.40.3-0.10.3
Patch foraging time to switch 0 sec0.10.20.40.7-0.6-0.30.1
Patch foraging water rate 0 sec0.20.40.5-0.70.7-0.0-0.7
Patch foraging water rate 12 sec0.40.60.8-0.70.60.9-0.8
Patch foraging water rate 18 sec0.40.51.5-0.20.11.2-0.7
Patch foraging water rate 24 sec0.71.01.3-0.90.91.2-1.0
Patch foraging water rate 6 sec0.30.40.6-0.80.70.3-0.5
Seeking ratio, delayed vs. immediate footshock2.12.43.51.6-1.7-0.71.9
Distance traveled before self-admin0.20.20.7-0.20.10.5-0.8
Distance traveled after self-admin0.30.30.80.5-0.4-0.90.2
Extensor digitorum longus weight0.10.40.70.8-0.8-0.20.3
Bone: elastic displacement0.20.20.5-0.30.3-0.3-0.7
Bone: elastic work0.71.01.7-1.01.00.2-1.3
Bone: endosteal estimation0.20.40.9-0.50.51.0-0.3
Bone: endosteal perimeter0.91.92.31.5-1.5-0.91.4
Epididymis fat weight0.40.91.8-0.80.81.3-0.7
Delta time in closed arm before/after self-admin0.20.20.20.3-0.30.50.5
Delta time in open arm before/after self-admin0.30.30.4-0.60.6-0.7-0.2
Diff in mean of infusions in LGA sessions0.10.10.30.2-0.1-0.1-0.5
Delay discount exponential model param2.82.93.8-1.71.71.5-1.9
Extinction: sum of active levers before priming0.10.10.4-0.30.20.60.2
Active lever presses in extinction session 60.50.51.2-0.60.61.1-0.2
Bone: final force0.91.52.2-1.21.21.0-1.5
Bone: final moment1.22.03.0-1.41.31.2-1.7
Food consumed during 24 hour testing period1.72.02.5-1.31.31.6-1.5
Glucose0.20.30.5-0.60.50.70.0
Heart weight2.33.25.2-1.71.71.4-2.3
Delay discount hyperbolic model param2.83.03.8-1.71.71.6-2.0
Intermittent access intake day 1-15 change0.40.40.60.7-0.7-0.8-0.2
Intermittent access intake escalation0.30.30.50.5-0.5-0.7-0.2
Intermittent access intake escalation 20.30.31.1-0.10.2-0.3-1.0
Intermitt. access day 1 inactive lever presses0.00.00.00.1-0.20.00.0
Intermitt. access day 15 inactive lever presses0.60.60.91.0-1.0-0.80.3
Intermitt. access escalation Index0.20.10.4-0.10.00.60.4
Intermittent access day 1 total infusions0.00.00.00.00.00.00.2
Intermittent access day 15 total infusions0.10.10.20.4-0.4-0.40.1
Intermittent access terminal intake (last 3 days)0.00.00.00.2-0.2-0.2-0.0
Intermittent access total infusions0.10.20.20.4-0.4-0.30.3
Intermittent access day 1 locomotion0.20.20.30.4-0.4-0.50.5
Intermittent access day 15 total locomotion0.60.60.90.7-0.7-0.70.9
Intermittent access total locomotion1.11.31.81.1-1.1-0.91.4
Intermittent access standard deviation0.60.72.0-0.50.5-0.5-1.4
Left kidney weight0.51.53.0-1.31.21.7-0.3
Right kidney weight0.20.72.0-0.60.61.40.2
Cocaine induced anxiety0.50.60.80.9-0.9-0.80.4
Post-drug Anxiety0.40.40.60.7-0.8-0.60.4
Baseline Anxiety0.20.20.30.4-0.4-0.30.5
Tail length5.918.020.9-4.64.63.7-4.1
Length with tail8.832.335.7-6.06.05.2-5.6
Length without tail6.814.915.6-3.93.93.7-3.8
Times rat made contact with spout0.40.50.8-0.50.50.9-0.7
Lifetime Intake0.20.20.20.4-0.4-0.40.4
Liver weight, left0.10.10.4-0.10.10.20.6
Liver weight, right1.01.62.3-1.41.31.5-0.8
Locomotor activity5.99.411.2-3.23.32.4-3.2
Locomotor testing distance5.69.311.0-3.23.32.5-3.2
Locomotor testing rearing0.40.60.8-0.70.80.5-0.9
Locomotion in novel chamber0.10.10.30.3-0.4-0.50.0
Locomotion in novel chamber post-restriction0.50.71.1-1.01.00.4-0.6
Fecal boli incidents, locomotor time 10.50.60.7-0.80.70.7-0.8
Change in fecal boli incidents, locomotor task0.00.00.1-0.20.30.20.0
Time >=10cm from walls, locomotor time 10.30.30.60.4-0.5-0.20.8
Bouts of movement, locomotor time 10.00.00.1-0.10.1-0.3-0.1
Total resting periods, locomotor time 10.00.00.0-0.10.1-0.2-0.2
Rest time, locomotor task time 10.50.50.70.7-0.8-0.50.8
Distance moved, locomotor task time 11.71.92.4-1.31.41.1-1.5
Vertical activity count, locomotor time 10.60.60.8-0.80.90.6-0.8
Time >=10cm from walls, locomotor time 21.51.61.8-1.31.31.3-1.1
Bouts of movement, locomotor time 20.10.20.3-0.30.40.3-0.5
Total resting periods, locomotor time 20.00.00.1-0.00.10.0-0.2
Rest time, locomotor task time 20.00.10.20.00.0-0.40.3
Distance moved, locomotor task time 20.80.91.3-0.80.81.1-1.1
Vertical activity count, locomotor time 20.00.00.1-0.10.00.3-0.2
Light reinforcement 10.50.91.0-1.01.01.0-0.8
Light reinforcement 20.30.41.00.5-0.50.31.0
Bone: marrow area0.20.41.0-0.50.51.0-0.3
Bone: maximum diameter0.30.50.70.8-0.8-0.80.4
Bone: maximum force0.81.41.6-1.21.21.1-1.3
Bone: maximum moment1.01.72.0-1.21.21.2-1.4
Mean time between licks in bursts0.81.11.41.2-1.2-1.00.7
Mean num. licks in bursts0.40.40.6-0.80.70.7-0.3
Cd content in liver2.42.73.6-1.61.61.4-1.9
Co content in liver0.10.10.3-0.20.30.4-0.6
Cu content in liver4.04.95.4-2.32.32.1-2.0
Fe content in liver1.72.02.5-1.41.51.0-1.6
K content in liver0.60.61.0-1.00.90.3-0.5
Mg content in liver0.00.00.1-0.20.2-0.30.1
Mn content in liver0.60.61.2-1.11.00.4-0.4
Na content in liver0.30.30.4-0.60.7-0.6-0.3
Rb content in liver1.21.52.5-1.11.20.9-1.6
Se content in liver0.00.00.0-0.10.1-0.1-0.0
Sr content in liver0.10.10.2-0.10.10.50.1
Zn content in liver5.25.87.6-2.42.42.8-1.9
Bone: minimum diameter0.20.40.60.7-0.7-0.30.5
Time in familiar zone, hab. session 11.11.01.51.1-1.0-1.20.5
Time in novel zone, hab. session 10.50.51.0-0.50.51.0-0.5
Total zone transitions, hab. session 10.71.02.1-0.90.91.5-0.3
Total locomotion distance, hab. session 10.20.30.7-0.60.50.8-0.2
Locomotion velocity, hab. session 10.20.30.5-0.70.60.7-0.1
Time in familiar zone, hab. session 20.40.41.00.5-0.4-1.00.1
Time in novel zone, hab. session 20.10.10.3-0.00.00.50.1
Total zone transitions, hab. session 20.10.10.3-0.30.20.60.0
Total locomotion distance, hab. session 20.20.20.4-0.60.60.3-0.2
Locomotion velocity, hab. session 20.10.10.3-0.50.40.10.0
Novel to familiar place preference ratio0.70.81.1-1.01.01.00.1
Novelty place preference0.70.71.1-1.00.91.00.1
Time in novel zone, NPP test0.91.01.5-1.11.11.2-0.1
Total zone transitions, NPP test2.33.35.1-1.91.82.2-1.1
Total locomotion distance, NPP test0.91.21.4-1.21.11.2-0.8
Locomotion velocity, NPP test0.91.31.7-1.31.21.2-0.7
Intraocular pressure1.01.41.9-1.11.21.4-1.0
Delta distance traveled before/after self-admin0.50.51.00.5-0.4-1.00.8
Delta ambulatory time before/after self-admin0.10.10.3-0.40.6-0.1-0.0
Parametrial fat weight0.71.41.6-1.31.31.2-0.9
Pavlov. Cond. lever latency4.86.16.2-2.42.52.5-2.5
Pavlov. Cond. magazine entry latency6.48.310.92.8-2.8-3.32.5
Pavlov. Cond. change in total contacts1.71.83.21.1-1.1-1.81.2
Pavlov. Cond. index score6.37.910.22.7-2.8-3.22.5
Pavlov. Cond. latency score6.17.79.42.7-2.7-3.12.6
Pavlov. Cond. lever contacts2.83.33.51.8-1.8-1.81.9
Pavlov. Cond. magazine entry number7.49.311.8-3.03.03.4-2.8
Pavlov. Cond. intertrial magazine entries0.40.50.5-0.70.70.6-0.7
Pavlov. Cond. lever-magazine prob. diff.5.56.99.42.6-2.6-3.12.2
Pavlov. Cond. response bias6.88.310.42.9-2.9-3.22.5
Pavlov. Cond. lever latency0.50.70.91.0-0.9-0.60.9
Pavlov. Cond. magazine entry latency0.10.20.60.1-0.2-0.80.1
Pavlov. Cond. change in total contacts2.63.54.4-2.12.01.3-2.1
Pavlov. Cond. index score0.20.20.3-0.50.4-0.1-0.6
Pavlov. Cond. latency score0.10.10.2-0.40.4-0.2-0.5
Pavlov. Cond. lever contacts1.01.41.8-1.31.21.0-1.1
Pavlov. Cond. magazine entry number0.30.41.0-0.40.51.0-0.3
Pavlov. Cond. intertrial magazine entries0.30.40.50.7-0.6-0.50.6
Pavlov. Cond. lever-magazine prob. diff.0.10.20.3-0.50.4-0.1-0.6
Pavlov. Cond. response bias0.10.20.2-0.50.40.1-0.5
Time in closed arm before self-admin1.92.12.7-1.51.51.1-1.7
Time in closed arm after self-admin0.20.20.6-0.20.20.8-0.3
Time in open arm before self-admin1.11.21.71.3-1.3-0.51.1
Time in open arm after self-admin0.80.91.80.4-0.4-1.31.2
Bone: periosteal estimation0.10.10.2-0.30.20.4-0.4
Bone: periosteal perimeter0.91.51.81.3-1.3-1.11.1
Bone: post-yield work0.10.20.6-0.20.20.8-0.1
Progressive ratio test 1 active lever presses0.00.00.1-0.1-0.00.00.3
Progressive ratio test 1 breakpoint0.00.10.20.0-0.20.10.4
Progressive ratio test 1 inactive lever presses0.40.51.00.6-0.7-1.00.1
Progressive ratio test 2 active lever presses0.70.80.90.9-0.9-0.90.8
Progressive ratio test 2 breakpoint0.50.60.70.8-0.8-0.70.7
Progressive ratio test 2 inactive lever presses1.51.72.41.4-1.5-1.50.6
Incentive Sensitization - Responses1.51.52.01.4-1.3-1.20.9
Incentive Sensitization - Breakpoint1.41.41.91.4-1.3-1.20.9
Sum of active levers in priming session hrs 5-60.20.20.3-0.60.60.3-0.3
Progressive ratio3.44.04.6-2.12.21.9-1.7
Food seeking constrained by brief footshock0.40.50.80.9-0.9-0.20.7
Seeking ratio, punishment vs. effort4.65.67.12.7-2.7-1.92.1
Retroperitoneal fat weight0.61.92.8-1.41.41.7-0.9
Reaction time number correct0.20.30.50.7-0.6-0.30.4
Reaction time mean minus median0.00.00.0-0.1-0.00.10.1
Reaction time mean minus median AUC0.10.10.3-0.40.30.6-0.2
Reaction time num false alarms0.30.40.50.6-0.5-0.50.7
Reaction time num false alarms AUC0.10.10.30.3-0.2-0.20.6
Reaction time trials correct on left0.20.30.50.7-0.6-0.30.4
Reaction time trials on left0.20.30.60.8-0.6-0.30.5
Reaction time mean0.00.00.0-0.10.1-0.2-0.1
Reaction time mean AUC0.00.00.00.0-0.1-0.00.1
Median of all reaction times0.00.00.1-0.10.1-0.2-0.1
Reaction time omissions0.40.60.70.8-0.8-0.80.6
Reaction time false alarm rate0.10.10.20.2-0.1-0.20.4
Reaction time premature initiation rate1.21.62.4-1.51.50.6-1.3
Reaction time premature initiations0.50.81.2-0.91.10.5-0.9
Std. dev. reaction times0.00.10.1-0.30.30.3-0.0
Reaction time trials completed0.20.30.60.8-0.6-0.30.5
Reaction time trials AUC0.30.40.70.8-0.7-0.40.5
Run reversals in cocaine runway, females1.61.62.11.5-1.4-1.01.1
Run reversals in cocaine runway, males0.40.40.7-0.50.5-0.5-0.8
Latency to leave start box in cocaine runway0.20.20.3-0.50.5-0.2-0.6
Latency to leave start box in cocaine runway, F1.21.32.7-1.11.10.2-1.6
Latency to leave start box in cocaine runway, M0.60.61.30.6-0.5-0.61.2
Std. dev. time between licks in bursts2.42.94.02.0-2.0-1.51.1
Total sessions with >9 infusions0.10.10.20.2-0.10.3-0.5
Short access day 1 total inactive lever presses2.22.43.11.8-1.7-1.51.3
Short access day 10 total inactive lever presses0.10.20.20.3-0.2-0.5-0.5
Short access day 1 total infusions0.70.70.91.0-0.9-0.80.7
Short access day 10 total infusions0.00.10.2-0.10.00.40.1
Short access total infusions0.30.40.50.6-0.6-0.40.7
Short access day 1 locomotion0.10.10.10.2-0.20.30.2
Short access day 10 total locomotion0.10.10.2-0.30.20.50.3
Short access total locomotion0.10.10.30.1-0.10.20.5
One hour access (0.3 mA shock)0.10.10.20.2-0.3-0.30.4
Compulsive drug intake0.10.10.40.1-0.20.20.6
One hour access (shock baseline)0.10.10.40.0-0.1-0.6-0.2
Social response proportion0.10.10.3-0.40.50.1-0.3
Social responses0.30.30.5-0.60.60.7-0.2
Social time0.70.91.41.2-1.1-0.90.2
Soleus weight4.312.615.4-3.43.43.9-3.4
Bone: stiffness0.10.20.3-0.40.40.5-0.3
Tibialis anterior weight0.10.41.1-0.20.21.1-0.5
Time to tail flick, vehicle, before self-admin2.12.12.9-1.41.31.7-1.4
Time to tail flick, vehicle, after self-admin0.50.51.0-0.70.7-0.2-1.0
Time to tail flick, test, before self-admin0.20.20.50.2-0.30.40.7
Time to tail flick, test, after self-admin0.10.10.10.3-0.4-0.30.1
Delta time to tail flick, vehicle, before/after SA0.90.92.40.7-0.6-1.50.3
Delta time to tail flick, test, before/after SA0.00.00.10.1-0.1-0.4-0.1
Tibia length6.819.321.0-4.64.54.3-4.2
Ambulatory time before self-admin0.10.10.30.1-0.20.3-0.5
Ambulatory time after self-admin0.10.10.20.2-0.1-0.40.2
Bone: tissue strength3.63.54.7-1.91.91.4-2.2
Total heroin consumption1.11.32.0-1.21.20.6-1.4
Bone: trabecular number0.71.11.80.8-0.9-1.11.3
Bone: trabecular spacing1.41.82.6-1.21.31.2-1.6
Bone: trabecular thickness0.10.10.2-0.30.2-0.40.4
Bone: trabecular tissue density0.10.20.3-0.50.50.6-0.2
Water consumed over 24 hours0.10.10.20.1-0.10.5-0.5
Number of responses in last shaping day0.30.30.70.7-0.8-0.20.2