Btbd6

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression Btbd6 0.24 0.15 1.9e-11 0.08 0.09 0.08 0.09 1.5e-09 1.1e-09 9.2e-09 8.8e-10
2 Liver gene expression Btbd6 0.16 0.15 5.6e-06 0.04 0.03 0.03 0.04 2.2e-05 2.1e-04 2.0e-04 4.8e-05
3 BLA gene expression Btbd6 0.06 0.05 3.9e-03 0.04 0.03 0.03 0.03 3.2e-03 7.8e-03 1.1e-02 6.5e-03
4 Brain gene expression Btbd6 0.02 0.02 6.7e-03 0.01 0.01 0.02 0.02 6.3e-02 3.1e-02 3.5e-03 9.7e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density0.00.00.10.2-0.1-0.1-0.0
Area under the delay curve0.70.81.6-1.31.10.5-0.3
BMI with tail1.44.56.6-2.52.02.6-1.1
BMI without tail0.61.11.9-1.41.11.0-0.7
Body weight1.77.29.32.6-2.9-2.13.1
Weight adjusted by age0.20.20.40.4-0.1-0.70.6
Bone surface0.40.81.5-0.80.90.4-1.2
Bone volume0.30.61.3-0.70.70.2-1.1
Breakpoint value in progressive ratio session0.10.10.30.2-0.20.5-0.1
Number of licking bursts1.01.21.8-1.21.30.6-1.0
Context. condit. distance diff. score2.83.44.02.0-2.0-2.01.3
Locomotion velocity, session 10.50.61.70.5-0.3-0.51.3
Locomotion distance, session 10.20.30.4-0.30.50.60.6
Locomotion velocity, session 20.30.30.7-0.60.90.30.4
Locomotion distance, session 20.60.81.2-1.11.10.8-0.4
Locomotion velocity, session 30.10.20.5-0.10.70.10.4
Locomotion distance, session 30.10.10.4-0.10.60.10.3
Stereotopy head waving bouts, day 30.00.00.10.1-0.0-0.3-0.0
Stereotopy head waving duration, day 30.00.10.20.1-0.1-0.5-0.1
Locomotion velocity, session 70.10.10.10.3-0.30.1-0.1
Locomotion distance, session 70.70.91.1-0.91.11.0-0.8
Stereotopy head waving bouts, day 72.32.63.41.8-1.6-1.71.3
Stereotopy head waving duration, day 71.41.72.31.5-1.3-1.21.0
Locomotion velocity, session 81.92.23.01.6-1.7-1.31.3
Locomotion distance, session 80.30.50.50.7-0.7-0.70.7
Degree of sensitization distance0.30.30.7-0.50.20.5-0.9
Degree of sensitization stereotypy1.01.01.51.2-1.1-0.90.8
Conditioned locomotion1.82.12.41.5-1.4-1.31.5
Cocaine response after cond. corrected0.10.20.30.1-0.10.60.5
Cocaine response after cond. not corrected0.40.51.5-0.50.41.20.3
Cocaine response before conditioning2.12.63.5-1.91.51.8-1.3
Saline control response0.10.10.20.30.1-0.30.4
Bone: connectivity density0.30.40.60.8-0.7-0.60.4
Bone: cortical apparent density4.35.77.32.3-2.3-2.72.2
Bone: cortical area0.20.20.40.4-0.2-0.6-0.6
Bone: cortical porosity0.10.10.20.3-0.4-0.5-0.1
Bone: cortical porosity0.10.10.30.4-0.5-0.2-0.0
Bone: cortical thickness0.50.81.31.2-1.0-0.80.3
Bone: cortical thickness0.50.61.20.8-0.5-1.10.4
Bone: cortical tissue density4.35.67.42.3-2.3-2.72.2
Condit. Reinf. active minus inactive responses0.10.20.3-0.40.50.50.1
Condit. Reinf. active-inactive response ratio1.31.42.3-1.21.11.5-0.8
Condit. Reinf. active responses0.30.41.10.4-0.3-0.11.1
Condit. Reinf. inactive responses2.63.14.81.7-1.4-1.72.2
Incentive salience index mean0.20.20.80.2-0.20.20.9
Condit. Reinf. lever presses0.30.50.90.5-0.8-0.10.9
Condit. Reinf. active minus inactive responses0.40.50.80.6-0.5-0.90.8
Condit. Reinf. active-inactive response ratio0.10.10.30.2-0.2-0.50.1
Condit. Reinf. active responses0.00.10.2-0.10.0-0.30.4
Condit. Reinf. inactive responses0.10.20.3-0.60.40.40.3
Condit. Reinf. lever presses1.82.53.1-1.81.71.4-1.4
Condit. Reinf. lever reinforcers received0.10.10.3-0.10.0-0.40.5
Conditioned reinforcement - actives1.11.11.60.9-1.0-1.30.9
Conditioned reinforcement - inactives0.81.02.10.7-0.6-1.01.4
Conditioned locomotion0.00.00.0-0.1-0.10.20.1
Patch foraging indifference point 0 sec5.79.211.23.3-3.1-2.92.8
Patch foraging indifference point AUC6.87.89.53.1-3.0-1.93.0
Delay disc. indifference point, 0s delay0.50.50.60.6-0.7-0.80.8
Delay disc. indifference point, 16s delay1.01.01.7-1.31.20.7-0.5
Delay disc. indifference point, 2s delay3.23.55.1-2.32.31.0-1.6
Delay disc. indifference point, 24s delay0.80.81.6-1.21.00.6-0.2
Delay disc. indifference point, 4s delay0.30.30.6-0.80.6-0.30.1
Delay disc. indifference point, 8s delay0.30.30.5-0.70.70.30.2
Indifference point function ln k0.30.51.30.5-0.5-1.10.1
Indifference point function log k0.30.51.30.5-0.5-1.10.1
Patch foraging total patch changes 0 sec7.011.213.63.7-3.5-3.13.1
Patch foraging total patch changes 12 sec4.05.16.42.4-2.0-2.12.5
Patch foraging total patch changes 18 sec2.73.54.32.1-1.8-1.52.1
Patch foraging total patch changes 24 sec1.31.51.91.3-1.3-0.91.4
Patch foraging total patch changes 6 sec6.29.211.33.4-3.1-2.23.3
Patch foraging time to switch 0 sec11.317.419.0-4.44.34.1-3.9
Patch foraging water rate 0 sec15.625.127.95.3-5.0-5.34.4
Patch foraging water rate 12 sec6.59.913.72.6-2.7-3.73.4
Patch foraging water rate 18 sec3.64.87.21.9-2.0-2.72.1
Patch foraging water rate 24 sec2.94.05.11.8-1.7-2.32.1
Patch foraging water rate 6 sec4.05.86.92.4-2.4-2.62.2
Seeking ratio, delayed vs. immediate footshock0.30.40.50.7-0.5-0.70.5
Distance traveled before self-admin0.70.71.1-1.01.10.8-0.4
Distance traveled after self-admin0.10.20.50.2-0.1-0.70.1
Extensor digitorum longus weight8.734.240.76.4-6.1-6.04.8
Bone: elastic displacement0.10.10.2-0.20.1-0.5-0.4
Bone: elastic work0.81.01.6-1.21.00.4-1.3
Bone: endosteal estimation1.73.75.6-2.02.11.0-2.4
Bone: endosteal perimeter0.40.91.8-0.81.00.4-1.3
Epididymis fat weight1.94.57.5-2.11.82.7-1.7
Delta time in closed arm before/after self-admin0.10.10.20.3-0.5-0.30.2
Delta time in open arm before/after self-admin1.00.91.21.1-0.9-1.00.9
Diff in mean of infusions in LGA sessions0.50.61.11.1-0.9-0.10.5
Delay discount exponential model param0.60.61.31.1-1.0-0.30.2
Extinction: sum of active levers before priming0.00.00.00.0-0.00.1-0.2
Active lever presses in extinction session 61.31.31.41.1-1.1-1.21.1
Bone: final force0.61.03.1-0.60.80.0-1.8
Bone: final moment0.50.82.8-0.40.5-0.1-1.7
Food consumed during 24 hour testing period1.01.21.41.1-0.9-1.11.2
Glucose0.10.10.30.10.2-0.5-0.4
Heart weight0.40.51.3-0.50.60.2-1.1
Delay discount hyperbolic model param0.80.91.71.3-1.2-0.40.3
Intermittent access intake day 1-15 change1.21.21.4-1.21.11.2-0.8
Intermittent access intake escalation1.31.21.4-1.21.11.2-0.9
Intermittent access intake escalation 20.20.20.4-0.30.30.5-0.6
Intermitt. access day 1 inactive lever presses3.33.55.41.8-1.5-1.82.3
Intermitt. access day 15 inactive lever presses0.70.71.20.7-0.5-1.01.1
Intermitt. access escalation Index0.10.10.20.00.4-0.40.1
Intermittent access day 1 total infusions0.10.10.20.3-0.40.10.4
Intermittent access day 15 total infusions0.80.91.4-1.00.91.2-0.6
Intermittent access terminal intake (last 3 days)1.01.11.6-1.11.11.3-0.6
Intermittent access total infusions0.10.10.2-0.20.20.50.0
Intermittent access day 1 locomotion0.10.10.2-0.1-0.10.5-0.2
Intermittent access day 15 total locomotion0.00.00.1-0.2-0.10.2-0.1
Intermittent access total locomotion0.10.10.10.2-0.30.10.3
Intermittent access standard deviation0.60.62.0-0.60.41.40.1
Left kidney weight2.46.88.93.0-3.0-2.51.8
Right kidney weight1.23.34.12.0-2.0-1.91.2
Cocaine induced anxiety0.30.40.90.6-0.4-1.00.2
Post-drug Anxiety0.30.30.50.6-0.4-0.70.4
Baseline Anxiety0.60.71.2-0.80.71.1-0.5
Tail length5.115.517.04.1-4.0-4.13.6
Length with tail9.333.937.76.1-6.1-5.65.4
Length without tail5.612.214.43.8-3.8-3.03.3
Times rat made contact with spout0.40.51.40.6-0.3-0.51.2
Lifetime Intake0.10.10.1-0.40.30.3-0.1
Liver weight, left2.43.84.72.1-2.2-1.81.7
Liver weight, right1.01.63.71.1-1.0-0.61.9
Locomotor activity0.20.20.40.4-0.4-0.50.6
Locomotor testing distance0.10.20.30.3-0.3-0.50.5
Locomotor testing rearing1.72.63.7-1.81.91.8-0.7
Locomotion in novel chamber3.23.95.91.8-1.7-2.41.9
Locomotion in novel chamber post-restriction0.20.30.4-0.50.60.2-0.6
Fecal boli incidents, locomotor time 10.40.41.1-0.40.21.0-0.5
Change in fecal boli incidents, locomotor task1.91.82.41.2-1.2-1.51.4
Time >=10cm from walls, locomotor time 12.62.64.51.8-2.1-0.31.7
Bouts of movement, locomotor time 11.01.11.5-1.11.11.2-0.8
Total resting periods, locomotor time 11.21.31.5-1.21.21.2-0.9
Rest time, locomotor task time 10.30.30.8-0.90.70.1-0.0
Distance moved, locomotor task time 11.01.01.6-1.00.90.9-1.3
Vertical activity count, locomotor time 10.10.10.2-0.00.10.3-0.5
Time >=10cm from walls, locomotor time 22.22.33.31.8-1.8-0.91.5
Bouts of movement, locomotor time 20.40.51.3-0.30.6-1.2-0.2
Total resting periods, locomotor time 20.40.40.9-0.50.7-1.0-0.2
Rest time, locomotor task time 20.10.10.4-0.40.0-0.20.6
Distance moved, locomotor task time 20.60.60.9-0.60.80.9-0.9
Vertical activity count, locomotor time 20.00.00.20.4-0.10.0-0.1
Light reinforcement 10.00.00.00.0-0.1-0.0-0.1
Light reinforcement 21.21.72.9-1.30.81.7-1.2
Bone: marrow area1.73.75.6-2.02.01.0-2.4
Bone: maximum diameter0.30.51.1-0.60.80.4-1.0
Bone: maximum force0.30.51.9-0.20.3-0.2-1.4
Bone: maximum moment0.20.41.6-0.00.1-0.3-1.3
Mean time between licks in bursts0.50.60.9-0.80.70.9-0.6
Mean num. licks in bursts1.51.82.41.5-1.4-0.91.6
Cd content in liver0.91.01.60.8-0.7-1.31.1
Co content in liver1.31.62.11.2-0.9-1.41.3
Cu content in liver2.32.83.1-1.71.71.8-1.4
Fe content in liver1.41.72.9-1.21.11.2-1.7
K content in liver1.41.42.11.0-1.4-0.61.5
Mg content in liver0.30.30.50.3-0.7-0.40.6
Mn content in liver0.20.20.40.3-0.5-0.6-0.4
Na content in liver0.10.10.20.1-0.30.50.1
Rb content in liver0.40.51.00.5-0.3-1.00.8
Se content in liver0.00.10.2-0.0-0.00.20.4
Sr content in liver0.20.10.3-0.20.6-0.30.3
Zn content in liver0.10.10.1-0.20.3-0.30.3
Bone: minimum diameter0.30.61.30.7-0.5-1.1-0.5
Time in familiar zone, hab. session 10.10.10.20.00.30.1-0.4
Time in novel zone, hab. session 10.60.61.0-1.00.90.6-0.3
Total zone transitions, hab. session 10.71.01.6-1.10.90.7-1.3
Total locomotion distance, hab. session 10.10.20.4-0.20.1-0.4-0.6
Locomotion velocity, hab. session 10.30.40.80.5-0.6-0.90.0
Time in familiar zone, hab. session 20.40.50.70.7-0.8-0.20.8
Time in novel zone, hab. session 20.90.91.4-1.11.20.6-0.9
Total zone transitions, hab. session 20.10.20.3-0.40.50.50.3
Total locomotion distance, hab. session 20.30.30.60.5-0.2-0.70.7
Locomotion velocity, hab. session 20.40.50.90.6-0.4-0.90.7
Novel to familiar place preference ratio0.60.61.0-0.81.00.7-0.6
Novelty place preference0.70.81.3-0.91.10.7-0.7
Time in novel zone, NPP test0.20.20.5-0.50.70.4-0.3
Total zone transitions, NPP test1.01.43.60.8-0.8-0.91.9
Total locomotion distance, NPP test0.60.81.40.7-0.7-0.81.2
Locomotion velocity, NPP test0.30.40.70.5-0.5-0.80.8
Intraocular pressure0.20.30.5-0.70.7-0.0-0.1
Delta distance traveled before/after self-admin0.30.40.90.6-0.4-0.9-0.0
Delta ambulatory time before/after self-admin1.01.12.30.9-1.0-1.50.4
Parametrial fat weight0.10.10.2-0.50.50.30.1
Pavlov. Cond. lever latency0.10.20.30.10.2-0.5-0.6
Pavlov. Cond. magazine entry latency0.20.30.9-0.1-0.20.5-0.9
Pavlov. Cond. change in total contacts0.00.00.10.1-0.30.20.1
Pavlov. Cond. index score0.10.10.4-0.1-0.20.6-0.2
Pavlov. Cond. latency score0.10.10.3-0.1-0.20.5-0.1
Pavlov. Cond. lever contacts0.30.30.8-0.50.30.9-0.2
Pavlov. Cond. magazine entry number0.10.10.2-0.00.4-0.50.5
Pavlov. Cond. intertrial magazine entries8.610.411.73.4-3.0-3.23.3
Pavlov. Cond. lever-magazine prob. diff.0.10.10.3-0.1-0.30.6-0.3
Pavlov. Cond. response bias0.10.10.20.1-0.50.5-0.0
Pavlov. Cond. lever latency2.83.74.72.2-2.1-1.81.6
Pavlov. Cond. magazine entry latency3.03.54.9-2.02.22.0-0.9
Pavlov. Cond. change in total contacts6.08.39.9-3.03.12.7-2.6
Pavlov. Cond. index score4.15.36.8-2.52.62.3-1.6
Pavlov. Cond. latency score3.64.55.6-2.32.42.3-1.3
Pavlov. Cond. lever contacts2.93.94.9-2.22.22.0-1.4
Pavlov. Cond. magazine entry number2.73.35.41.9-2.3-1.80.9
Pavlov. Cond. intertrial magazine entries4.76.17.02.4-2.6-2.62.2
Pavlov. Cond. lever-magazine prob. diff.4.86.17.8-2.72.82.5-1.7
Pavlov. Cond. response bias3.04.15.2-2.32.32.0-1.4
Time in closed arm before self-admin7.48.310.1-3.23.12.9-2.3
Time in closed arm after self-admin5.35.48.1-2.82.51.8-2.1
Time in open arm before self-admin6.16.77.32.6-2.5-2.72.5
Time in open arm after self-admin9.210.213.23.6-3.4-2.82.8
Bone: periosteal estimation0.71.53.5-1.01.20.2-1.9
Bone: periosteal perimeter0.10.20.7-0.30.40.1-0.9
Bone: post-yield work1.41.92.71.6-1.4-1.60.5
Progressive ratio test 1 active lever presses0.00.00.1-0.20.2-0.10.2
Progressive ratio test 1 breakpoint0.10.10.1-0.30.40.10.2
Progressive ratio test 1 inactive lever presses2.52.74.21.4-1.2-2.01.8
Progressive ratio test 2 active lever presses0.00.00.1-0.2-0.10.10.1
Progressive ratio test 2 breakpoint0.00.00.0-0.1-0.2-0.10.2
Progressive ratio test 2 inactive lever presses0.20.20.4-0.0-0.1-0.70.6
Incentive Sensitization - Responses0.10.10.2-0.4-0.00.2-0.1
Incentive Sensitization - Breakpoint0.00.00.1-0.4-0.00.1-0.1
Sum of active levers in priming session hrs 5-60.30.30.5-0.40.50.7-0.5
Progressive ratio1.21.42.3-1.51.20.1-1.3
Food seeking constrained by brief footshock0.20.20.60.00.2-0.80.3
Seeking ratio, punishment vs. effort0.81.01.51.2-0.8-0.51.2
Retroperitoneal fat weight0.00.10.2-0.20.30.40.3
Reaction time number correct3.75.36.32.5-2.4-2.41.9
Reaction time mean minus median0.10.10.2-0.20.00.00.5
Reaction time mean minus median AUC0.00.10.2-0.2-0.0-0.20.4
Reaction time num false alarms1.92.63.01.6-1.7-1.61.5
Reaction time num false alarms AUC2.02.83.41.6-1.9-1.81.4
Reaction time trials correct on left3.75.36.32.5-2.4-2.41.9
Reaction time trials on left3.85.46.32.5-2.4-2.41.9
Reaction time mean1.31.83.1-1.81.51.1-1.0
Reaction time mean AUC0.71.01.9-1.41.10.7-0.6
Median of all reaction times1.21.72.8-1.71.40.9-1.1
Reaction time omissions1.31.82.91.0-1.1-1.71.4
Reaction time false alarm rate0.20.20.30.3-0.6-0.60.5
Reaction time premature initiation rate0.10.20.30.5-0.4-0.50.1
Reaction time premature initiations1.72.53.41.8-1.7-1.71.0
Std. dev. reaction times0.71.02.0-1.41.20.7-0.6
Reaction time trials completed3.85.46.32.5-2.4-2.41.9
Reaction time trials AUC3.95.66.52.6-2.5-2.41.9
Run reversals in cocaine runway, females2.82.73.4-1.81.51.4-1.8
Run reversals in cocaine runway, males0.00.00.1-0.20.3-0.0-0.2
Latency to leave start box in cocaine runway0.70.81.5-1.01.20.4-0.7
Latency to leave start box in cocaine runway, F0.30.30.4-0.50.50.6-0.6
Latency to leave start box in cocaine runway, M0.60.61.6-0.81.30.2-0.4
Std. dev. time between licks in bursts0.00.00.10.3-0.0-0.30.1
Total sessions with >9 infusions0.00.00.1-0.20.40.10.1
Short access day 1 total inactive lever presses0.10.10.2-0.30.4-0.20.4
Short access day 10 total inactive lever presses0.50.61.20.3-0.2-1.01.1
Short access day 1 total infusions0.10.10.2-0.10.2-0.40.2
Short access day 10 total infusions0.20.20.3-0.50.40.4-0.2
Short access total infusions0.60.71.0-1.01.00.5-0.7
Short access day 1 locomotion0.30.30.5-0.70.70.5-0.2
Short access day 10 total locomotion0.10.10.20.00.10.40.4
Short access total locomotion0.10.10.1-0.20.30.00.4
One hour access (0.3 mA shock)0.70.81.30.9-0.9-0.51.1
Compulsive drug intake0.50.50.70.8-0.8-0.30.7
One hour access (shock baseline)0.10.10.2-0.30.40.10.1
Social response proportion0.40.40.8-0.90.40.2-0.8
Social responses0.40.61.0-1.00.90.3-0.7
Social time0.20.31.2-0.30.1-1.1-0.2
Soleus weight2.05.87.62.8-2.6-1.82.4
Bone: stiffness0.61.01.61.2-0.8-1.30.3
Tibialis anterior weight0.92.93.82.0-1.6-1.51.7
Time to tail flick, vehicle, before self-admin3.23.36.11.7-1.6-1.32.5
Time to tail flick, vehicle, after self-admin0.90.91.31.1-1.0-0.51.1
Time to tail flick, test, before self-admin0.10.10.4-0.40.6-0.20.0
Time to tail flick, test, after self-admin4.64.86.52.4-2.5-1.52.1
Delta time to tail flick, vehicle, before/after SA0.20.20.20.5-0.4-0.2-0.5
Delta time to tail flick, test, before/after SA5.14.66.92.3-2.6-1.51.9
Tibia length0.10.20.40.3-0.7-0.30.1
Ambulatory time before self-admin1.01.01.5-1.01.21.1-0.5
Ambulatory time after self-admin0.20.20.4-0.40.70.0-0.5
Bone: tissue strength0.70.71.8-0.70.50.4-1.3
Total heroin consumption2.32.63.71.9-1.9-1.21.4
Bone: trabecular number0.20.40.50.7-0.6-0.70.4
Bone: trabecular spacing0.00.00.1-0.30.00.2-0.3
Bone: trabecular thickness0.10.10.20.2-0.4-0.20.4
Bone: trabecular tissue density0.00.00.00.0-0.20.0-0.0
Water consumed over 24 hours1.31.52.81.1-0.9-1.71.1
Number of responses in last shaping day0.60.60.7-0.80.80.7-0.8