Adcy7

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression Adcy7 0.03 0.02 1.9e-03 0.01 0.01 0.01 0.02 7.8e-03 7.1e-03 1.2e-02 3.4e-03
2 Eye isoform ratio XM_017601390.2 0.53 0.23 6.0e-03 0.16 0.09 0.19 0.12 1.8e-03 1.8e-02 6.5e-04 6.9e-03
3 PL gene expression Adcy7 0.1 0.06 6.4e-08 0.06 0.06 0.05 0.06 7.6e-07 1.1e-07 3.4e-06 7.1e-07
4 Adipose isoform ratio XM_017601390.2 0.04 0.03 2.4e-03 0 0 0.01 0.01 1.8e-01 9.4e-02 2.9e-02 6.8e-02

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density1.11.84.01.4-2.01.1-0.4
Area under the delay curve0.20.20.5-0.50.7-0.3-0.2
BMI with tail1.13.76.4-2.52.2-1.3-1.3
BMI without tail0.10.30.6-0.10.70.70.3
Body weight0.52.05.2-1.62.3-0.40.2
Weight adjusted by age2.62.95.5-2.42.0-0.6-1.3
Bone surface0.40.81.11.1-0.91.00.1
Bone volume1.11.93.11.7-1.01.80.7
Breakpoint value in progressive ratio session0.30.40.70.8-0.8-0.10.4
Number of licking bursts0.30.30.60.8-0.50.10.7
Context. condit. distance diff. score3.94.710.5-1.8-0.5-3.2-2.2
Locomotion velocity, session 10.80.92.00.9-0.40.81.4
Locomotion distance, session 10.30.41.0-0.0-1.0-0.8-0.1
Locomotion velocity, session 20.30.31.00.2-1.0-0.3-0.3
Locomotion distance, session 20.40.51.1-0.5-0.5-1.0-0.7
Locomotion velocity, session 31.21.43.0-1.41.7-0.6-0.6
Locomotion distance, session 30.30.30.6-0.50.8-0.40.3
Stereotopy head waving bouts, day 30.40.50.9-0.71.0-0.6-0.5
Stereotopy head waving duration, day 30.70.91.1-1.00.8-0.9-0.9
Locomotion velocity, session 72.12.34.4-0.9-0.6-2.1-2.0
Locomotion distance, session 71.52.03.60.4-1.9-1.4-1.4
Stereotopy head waving bouts, day 70.91.03.2-0.61.80.00.6
Stereotopy head waving duration, day 71.61.93.40.31.71.11.8
Locomotion velocity, session 82.42.96.2-0.6-1.1-2.5-1.9
Locomotion distance, session 82.63.89.6-1.0-1.0-3.1-1.8
Degree of sensitization distance1.71.73.40.5-1.8-0.9-1.6
Degree of sensitization stereotypy1.31.44.2-0.82.00.40.7
Conditioned locomotion0.10.10.30.1-0.30.50.1
Cocaine response after cond. corrected1.71.92.9-1.5-0.6-1.5-1.7
Cocaine response after cond. not corrected0.80.91.7-1.3-0.0-0.9-1.0
Cocaine response before conditioning2.22.75.21.20.81.82.3
Saline control response2.33.08.41.6-2.9-0.9-0.5
Bone: connectivity density1.62.57.11.3-2.70.3-1.2
Bone: cortical apparent density0.70.91.7-0.3-0.8-1.0-1.3
Bone: cortical area0.10.20.20.50.00.40.5
Bone: cortical porosity0.30.41.0-0.11.0-0.10.7
Bone: cortical porosity0.80.91.80.21.30.31.3
Bone: cortical thickness0.00.10.1-0.10.40.30.1
Bone: cortical thickness0.40.51.2-0.2-0.5-0.7-1.1
Bone: cortical tissue density0.81.02.0-0.4-0.9-1.1-1.4
Condit. Reinf. active minus inactive responses0.70.71.6-0.90.2-1.3-0.6
Condit. Reinf. active-inactive response ratio1.01.12.8-1.10.2-1.7-0.7
Condit. Reinf. active responses0.10.10.20.20.30.10.4
Condit. Reinf. inactive responses2.63.14.92.2-0.62.11.6
Incentive salience index mean0.20.20.40.5-0.4-0.20.6
Condit. Reinf. lever presses1.21.62.91.7-0.70.91.5
Condit. Reinf. active minus inactive responses0.10.10.1-0.40.40.00.0
Condit. Reinf. active-inactive response ratio0.91.02.0-0.61.11.40.5
Condit. Reinf. active responses0.00.10.1-0.00.4-0.20.2
Condit. Reinf. inactive responses0.50.62.3-0.0-0.0-1.5-0.5
Condit. Reinf. lever presses0.30.40.7-0.80.6-0.6-0.5
Condit. Reinf. lever reinforcers received0.20.20.7-0.40.9-0.20.2
Conditioned reinforcement - actives0.70.71.4-0.90.5-1.2-0.7
Conditioned reinforcement - inactives1.41.55.4-0.80.1-2.3-0.3
Conditioned locomotion0.20.20.5-0.1-0.2-0.5-0.7
Patch foraging indifference point 0 sec0.61.02.7-0.7-0.1-1.6-0.9
Patch foraging indifference point AUC1.01.11.71.3-1.30.70.7
Delay disc. indifference point, 0s delay1.11.22.71.3-0.20.81.6
Delay disc. indifference point, 16s delay0.50.51.1-0.81.1-0.3-0.5
Delay disc. indifference point, 2s delay0.60.61.6-0.81.30.4-0.4
Delay disc. indifference point, 24s delay0.10.10.2-0.20.40.00.3
Delay disc. indifference point, 4s delay0.50.50.8-0.1-0.7-0.9-0.9
Delay disc. indifference point, 8s delay0.60.61.0-1.01.0-0.8-0.0
Indifference point function ln k1.01.42.3-1.50.6-1.0-1.3
Indifference point function log k1.01.42.3-1.50.6-1.0-1.3
Patch foraging total patch changes 0 sec0.71.12.9-0.80.1-1.7-0.9
Patch foraging total patch changes 12 sec1.21.54.11.0-2.0-1.1-0.0
Patch foraging total patch changes 18 sec1.82.36.01.7-2.5-0.20.2
Patch foraging total patch changes 24 sec0.91.12.01.2-1.4-0.90.5
Patch foraging total patch changes 6 sec0.20.30.50.6-0.7-0.50.3
Patch foraging time to switch 0 sec0.10.10.30.10.3-0.50.5
Patch foraging water rate 0 sec0.10.20.70.2-0.20.80.1
Patch foraging water rate 12 sec0.30.41.00.7-0.21.00.3
Patch foraging water rate 18 sec2.93.98.21.50.62.92.2
Patch foraging water rate 24 sec0.10.10.50.1-0.10.70.0
Patch foraging water rate 6 sec2.13.05.62.4-2.01.50.8
Seeking ratio, delayed vs. immediate footshock3.03.56.0-2.51.0-1.8-1.9
Distance traveled before self-admin1.21.23.2-1.21.80.50.3
Distance traveled after self-admin1.41.53.4-0.01.31.81.0
Extensor digitorum longus weight0.31.33.7-0.10.91.90.8
Bone: elastic displacement0.20.20.4-0.2-0.2-0.6-0.7
Bone: elastic work0.00.00.1-0.10.30.20.0
Bone: endosteal estimation0.00.10.2-0.2-0.2-0.4-0.2
Bone: endosteal perimeter0.30.61.4-0.2-0.7-1.2-0.7
Epididymis fat weight0.10.20.6-0.3-0.1-0.8-0.4
Delta time in closed arm before/after self-admin0.90.91.6-1.31.0-0.4-0.8
Delta time in open arm before/after self-admin1.61.63.01.7-1.70.30.5
Diff in mean of infusions in LGA sessions0.91.01.70.1-1.1-1.3-1.0
Delay discount exponential model param0.20.20.30.5-0.50.40.3
Extinction: sum of active levers before priming2.22.23.5-1.90.9-1.3-1.6
Active lever presses in extinction session 60.00.00.10.1-0.00.3-0.2
Bone: final force1.72.85.01.30.52.12.2
Bone: final moment1.32.14.01.00.71.82.0
Food consumed during 24 hour testing period3.94.78.42.9-2.61.11.6
Glucose0.30.40.70.80.40.40.8
Heart weight1.11.62.9-1.71.5-0.7-0.9
Delay discount hyperbolic model param0.20.20.30.5-0.50.40.4
Intermittent access intake day 1-15 change2.72.74.62.2-1.70.61.7
Intermittent access intake escalation4.04.06.82.6-2.00.92.1
Intermittent access intake escalation 22.92.94.92.1-2.2-0.21.5
Intermitt. access day 1 inactive lever presses0.30.30.9-0.40.1-1.0-0.4
Intermitt. access day 15 inactive lever presses1.31.43.3-0.7-0.4-1.8-1.4
Intermitt. access escalation Index0.40.41.00.7-1.0-0.00.2
Intermittent access day 1 total infusions2.12.44.4-2.11.6-1.1-1.2
Intermittent access day 15 total infusions0.00.00.00.00.0-0.10.0
Intermittent access terminal intake (last 3 days)0.30.30.9-0.3-0.2-0.9-0.5
Intermittent access total infusions0.10.20.3-0.40.3-0.5-0.3
Intermittent access day 1 locomotion1.01.02.8-1.01.70.6-0.3
Intermittent access day 15 total locomotion0.90.92.1-0.71.41.10.1
Intermittent access total locomotion0.91.02.4-0.81.50.90.4
Intermittent access standard deviation0.20.30.40.6-0.6-0.00.6
Left kidney weight0.41.02.30.30.81.01.5
Right kidney weight0.51.32.8-0.51.70.21.4
Cocaine induced anxiety3.33.810.3-0.8-1.1-3.2-1.7
Post-drug Anxiety1.41.63.4-0.7-0.6-1.8-1.4
Baseline Anxiety2.02.16.00.40.92.41.1
Tail length1.44.16.22.5-0.92.02.3
Length with tail0.20.82.10.60.50.71.4
Length without tail1.12.44.1-2.02.0-1.1-0.4
Times rat made contact with spout0.20.20.70.2-0.00.80.4
Lifetime Intake0.20.20.7-0.40.1-0.8-0.3
Liver weight, left0.20.41.30.0-0.2-1.2-0.3
Liver weight, right0.10.10.3-0.3-0.1-0.5-0.1
Locomotor activity0.50.72.7-0.41.70.20.2
Locomotor testing distance0.20.30.4-0.30.7-0.5-0.7
Locomotor testing rearing0.60.91.51.2-1.1-0.90.4
Locomotion in novel chamber0.50.71.5-0.71.2-0.30.8
Locomotion in novel chamber post-restriction0.40.51.00.31.00.80.7
Fecal boli incidents, locomotor time 10.70.81.61.2-1.2-0.40.5
Change in fecal boli incidents, locomotor task0.30.30.70.2-0.8-0.5-0.5
Time >=10cm from walls, locomotor time 11.11.11.70.31.11.21.3
Bouts of movement, locomotor time 10.60.71.70.9-1.30.0-0.4
Total resting periods, locomotor time 10.60.71.60.6-1.3-0.3-0.9
Rest time, locomotor task time 10.50.51.30.5-1.20.4-0.5
Distance moved, locomotor task time 10.50.50.8-0.90.5-0.7-0.7
Vertical activity count, locomotor time 10.50.51.20.8-0.10.31.1
Time >=10cm from walls, locomotor time 20.70.81.2-0.81.11.00.5
Bouts of movement, locomotor time 20.30.41.2-0.50.2-0.2-1.1
Total resting periods, locomotor time 20.40.41.3-0.1-0.4-0.5-1.2
Rest time, locomotor task time 22.12.45.00.5-2.2-1.0-1.9
Distance moved, locomotor task time 21.82.15.4-1.62.30.30.6
Vertical activity count, locomotor time 21.31.44.80.50.80.42.2
Light reinforcement 19.316.931.45.6-3.82.63.9
Light reinforcement 26.89.117.54.2-2.82.22.5
Bone: marrow area0.00.10.2-0.2-0.2-0.5-0.3
Bone: maximum diameter0.20.30.4-0.60.6-0.6-0.2
Bone: maximum force0.30.51.00.50.21.00.8
Bone: maximum moment0.20.30.50.30.30.70.7
Mean time between licks in bursts0.30.50.7-0.40.9-0.90.6
Mean num. licks in bursts0.20.30.4-0.60.30.5-0.6
Cd content in liver0.70.82.0-0.6-0.7-1.4-0.6
Co content in liver0.50.61.5-0.81.20.30.4
Cu content in liver0.10.10.2-0.50.5-0.00.0
Fe content in liver1.61.95.70.20.92.41.0
K content in liver0.70.71.6-0.61.30.60.6
Mg content in liver0.70.71.6-1.11.3-0.00.0
Mn content in liver0.91.01.8-1.30.2-0.8-1.3
Na content in liver0.90.91.7-0.11.21.30.8
Rb content in liver1.21.52.50.70.71.61.6
Se content in liver2.53.15.81.40.32.42.1
Sr content in liver0.40.30.7-0.00.70.30.8
Zn content in liver2.52.73.8-1.90.1-1.9-2.0
Bone: minimum diameter0.61.11.51.2-0.61.21.0
Time in familiar zone, hab. session 10.70.61.70.8-0.20.51.3
Time in novel zone, hab. session 10.80.71.7-0.90.60.2-1.3
Total zone transitions, hab. session 10.10.20.4-0.4-0.1-0.6-0.5
Total locomotion distance, hab. session 10.71.02.3-0.8-0.3-1.0-1.5
Locomotion velocity, hab. session 10.60.91.9-0.7-0.4-1.1-1.4
Time in familiar zone, hab. session 21.41.53.11.6-1.8-0.50.2
Time in novel zone, hab. session 22.32.35.2-2.31.5-0.0-1.3
Total zone transitions, hab. session 20.20.30.50.2-0.7-0.6-0.3
Total locomotion distance, hab. session 20.40.50.9-0.2-0.8-0.6-0.9
Locomotion velocity, hab. session 20.20.20.50.1-0.7-0.2-0.6
Novel to familiar place preference ratio0.90.92.0-1.40.6-0.3-1.1
Novelty place preference0.80.81.6-1.20.5-0.2-1.1
Time in novel zone, NPP test0.70.81.5-1.21.00.2-0.8
Total zone transitions, NPP test0.10.10.20.1-0.3-0.40.4
Total locomotion distance, NPP test0.00.00.1-0.40.10.0-0.2
Locomotion velocity, NPP test0.10.10.2-0.1-0.4-0.3-0.2
Intraocular pressure4.15.79.8-2.80.6-2.2-3.1
Delta distance traveled before/after self-admin0.70.81.21.0-0.51.10.8
Delta ambulatory time before/after self-admin1.31.42.01.4-0.91.11.2
Parametrial fat weight0.20.30.80.10.4-0.60.9
Pavlov. Cond. lever latency0.10.20.50.1-0.3-0.7-0.3
Pavlov. Cond. magazine entry latency0.20.20.4-0.60.50.5-0.1
Pavlov. Cond. change in total contacts1.11.23.00.80.01.71.1
Pavlov. Cond. index score0.20.20.3-0.60.50.40.0
Pavlov. Cond. latency score0.10.10.2-0.40.10.1-0.2
Pavlov. Cond. lever contacts0.40.41.0-0.10.71.00.5
Pavlov. Cond. magazine entry number0.70.91.40.4-1.2-1.1-0.8
Pavlov. Cond. intertrial magazine entries0.10.10.3-0.10.2-0.5-0.1
Pavlov. Cond. lever-magazine prob. diff.0.20.30.5-0.70.60.4-0.1
Pavlov. Cond. response bias1.21.42.7-0.41.51.60.9
Pavlov. Cond. lever latency0.50.71.8-0.8-0.3-0.3-1.4
Pavlov. Cond. magazine entry latency0.20.30.80.30.2-0.10.9
Pavlov. Cond. change in total contacts0.60.82.00.20.90.71.4
Pavlov. Cond. index score0.50.61.60.20.80.41.2
Pavlov. Cond. latency score0.40.51.30.20.70.41.1
Pavlov. Cond. lever contacts0.81.12.81.10.20.51.7
Pavlov. Cond. magazine entry number0.20.20.60.1-0.6-0.1-0.8
Pavlov. Cond. intertrial magazine entries0.40.51.21.0-1.1-0.1-0.0
Pavlov. Cond. lever-magazine prob. diff.0.50.61.80.20.80.41.3
Pavlov. Cond. response bias0.71.02.80.60.80.51.7
Time in closed arm before self-admin2.93.24.82.0-0.52.02.2
Time in closed arm after self-admin1.11.13.00.60.41.71.0
Time in open arm before self-admin1.92.13.6-1.91.3-1.4-1.0
Time in open arm after self-admin0.40.40.7-0.80.4-0.8-0.5
Bone: periosteal estimation0.00.00.10.3-0.3-0.00.1
Bone: periosteal perimeter0.20.40.9-0.1-0.5-0.9-0.6
Bone: post-yield work0.30.40.80.2-0.9-0.3-0.8
Progressive ratio test 1 active lever presses1.31.43.6-1.41.90.20.1
Progressive ratio test 1 breakpoint1.01.13.0-1.11.70.30.3
Progressive ratio test 1 inactive lever presses0.20.20.5-0.30.7-0.20.6
Progressive ratio test 2 active lever presses0.30.30.6-0.80.8-0.20.0
Progressive ratio test 2 breakpoint0.30.40.7-0.90.8-0.3-0.2
Progressive ratio test 2 inactive lever presses1.61.92.7-1.70.8-1.6-1.3
Incentive Sensitization - Responses0.20.20.5-0.0-0.5-0.7-0.3
Incentive Sensitization - Breakpoint0.20.20.40.1-0.6-0.7-0.3
Sum of active levers in priming session hrs 5-60.50.40.80.3-0.9-0.8-0.5
Progressive ratio0.81.02.50.3-1.6-0.0-1.1
Food seeking constrained by brief footshock1.62.04.02.0-1.80.50.6
Seeking ratio, punishment vs. effort1.21.43.51.10.60.81.9
Retroperitoneal fat weight0.61.95.5-1.0-0.2-2.4-0.9
Reaction time number correct0.50.81.4-1.20.8-0.4-0.9
Reaction time mean minus median1.21.64.4-1.22.10.60.2
Reaction time mean minus median AUC0.91.22.8-1.41.70.3-0.1
Reaction time num false alarms2.83.96.2-2.41.4-2.5-1.2
Reaction time num false alarms AUC2.53.55.5-2.21.4-2.4-1.3
Reaction time trials correct on left0.50.81.4-1.20.8-0.4-0.9
Reaction time trials on left0.60.91.7-1.30.9-0.5-0.9
Reaction time mean1.92.75.6-2.42.20.2-0.3
Reaction time mean AUC1.92.65.6-2.42.20.1-0.4
Median of all reaction times1.62.25.4-2.31.90.0-0.4
Reaction time omissions1.31.84.0-1.72.0-0.6-0.1
Reaction time false alarm rate1.01.43.2-1.20.7-1.8-0.6
Reaction time premature initiation rate3.34.49.22.6-3.0-0.31.2
Reaction time premature initiations1.52.14.91.6-2.2-0.60.6
Std. dev. reaction times1.11.53.6-1.51.90.30.1
Reaction time trials completed0.60.91.7-1.30.9-0.5-0.9
Reaction time trials AUC0.60.91.7-1.30.9-0.5-0.9
Run reversals in cocaine runway, females0.70.71.6-1.11.3-0.1-0.3
Run reversals in cocaine runway, males0.20.20.6-0.40.80.3-0.3
Latency to leave start box in cocaine runway0.30.30.8-0.5-0.4-0.5-0.9
Latency to leave start box in cocaine runway, F0.70.81.4-1.00.90.3-1.2
Latency to leave start box in cocaine runway, M2.72.66.81.5-2.6-1.00.6
Std. dev. time between licks in bursts0.20.20.50.6-0.20.10.7
Total sessions with >9 infusions0.40.50.8-0.90.9-0.4-0.3
Short access day 1 total inactive lever presses0.30.40.70.7-0.5-0.10.8
Short access day 10 total inactive lever presses0.70.81.80.9-1.3-0.70.4
Short access day 1 total infusions1.11.11.9-1.41.1-0.9-0.7
Short access day 10 total infusions0.30.30.9-0.3-0.0-1.0-0.5
Short access total infusions0.10.10.2-0.20.2-0.40.1
Short access day 1 locomotion1.31.42.4-1.61.1-0.7-1.3
Short access day 10 total locomotion0.20.20.4-0.60.6-0.1-0.2
Short access total locomotion0.70.71.2-1.11.0-0.2-0.9
One hour access (0.3 mA shock)1.31.53.20.0-1.0-1.8-1.3
Compulsive drug intake0.80.81.71.1-1.30.1-0.5
One hour access (shock baseline)1.21.42.5-1.00.1-1.6-1.4
Social response proportion0.40.50.8-0.70.90.60.5
Social responses0.50.61.9-0.5-0.4-1.4-0.3
Social time0.30.41.00.7-0.51.00.3
Soleus weight0.20.61.20.1-0.9-1.1-0.6
Bone: stiffness0.71.11.60.50.91.31.3
Tibialis anterior weight0.41.32.7-1.61.4-0.1-0.6
Time to tail flick, vehicle, before self-admin1.81.83.40.3-1.8-0.9-1.8
Time to tail flick, vehicle, after self-admin1.01.12.71.0-1.6-0.8-0.4
Time to tail flick, test, before self-admin0.40.40.7-0.7-0.1-0.7-0.8
Time to tail flick, test, after self-admin0.30.30.50.7-0.40.60.1
Delta time to tail flick, vehicle, before/after SA0.30.30.60.7-0.5-0.30.8
Delta time to tail flick, test, before/after SA1.71.53.20.60.91.81.3
Tibia length1.23.47.8-0.22.81.81.7
Ambulatory time before self-admin1.11.22.9-1.31.70.3-0.0
Ambulatory time after self-admin1.31.43.40.70.51.81.3
Bone: tissue strength0.30.30.5-0.10.40.60.7
Total heroin consumption0.00.10.1-0.10.1-0.30.3
Bone: trabecular number1.11.73.71.3-1.91.0-0.7
Bone: trabecular spacing0.91.11.9-1.41.3-0.90.1
Bone: trabecular thickness2.02.45.21.7-0.82.30.8
Bone: trabecular tissue density0.20.30.8-0.70.90.2-0.1
Water consumed over 24 hours1.82.23.51.9-1.51.11.3
Number of responses in last shaping day3.43.65.2-2.30.9-2.0-2.0