Zfp950

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 NAcc gene expression Zfp950 0.07 0.04 1.4e-09 0.06 0.07 0.08 0.06 2.8e-07 4.6e-09 3.7e-09 2.2e-07
2 PL gene expression Zfp950 0.04 0.03 4.1e-04 0.03 0.03 0.02 0.03 7.5e-04 3.5e-04 2.3e-03 7.8e-04
3 Adipose gene expression Zfp950 0.03 0.02 3.1e-04 0.03 0.03 0.03 0.03 6.1e-04 8.5e-04 7.6e-04 8.3e-04
4 Brain gene expression Zfp950 0.06 0.05 9.5e-05 0.03 0.05 0.03 0.04 6.0e-04 3.2e-05 1.3e-03 1.3e-04

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density1.52.55.8-2.41.1-1.60.7
Area under the delay curve1.21.22.4-0.31.4-0.71.6
BMI with tail24.980.7124.6-11.28.3-8.57.5
BMI without tail17.235.650.9-7.16.0-5.45.2
Body weight22.895.5149.1-12.29.1-9.28.1
Weight adjusted by age5.25.99.1-3.02.4-2.02.2
Bone surface1.83.26.2-2.51.3-2.01.0
Bone volume4.27.112.3-3.52.1-2.91.8
Breakpoint value in progressive ratio session2.42.74.3-1.42.1-1.01.9
Number of licking bursts0.20.20.50.30.30.7-0.0
Context. condit. distance diff. score0.10.10.20.2-0.30.2-0.5
Locomotion velocity, session 11.51.62.31.3-1.11.5-1.1
Locomotion distance, session 11.31.72.61.6-1.50.8-1.1
Locomotion velocity, session 20.91.01.71.0-1.30.6-1.0
Locomotion distance, session 20.50.71.7-1.00.1-1.30.4
Locomotion velocity, session 31.72.03.21.8-1.51.0-1.2
Locomotion distance, session 31.01.11.41.1-1.20.7-1.0
Stereotopy head waving bouts, day 30.10.10.20.5-0.3-0.1-0.0
Stereotopy head waving duration, day 30.10.10.30.50.10.00.4
Locomotion velocity, session 70.10.10.20.4-0.30.1-0.3
Locomotion distance, session 70.30.30.6-0.8-0.2-0.8-0.2
Stereotopy head waving bouts, day 70.50.60.90.90.90.60.7
Stereotopy head waving duration, day 70.70.91.91.40.80.70.6
Locomotion velocity, session 82.32.83.61.5-1.81.4-1.9
Locomotion distance, session 80.81.22.10.6-1.40.6-1.4
Degree of sensitization distance1.31.33.0-1.70.9-1.00.7
Degree of sensitization stereotypy0.80.91.80.51.30.41.1
Conditioned locomotion0.10.10.40.20.00.60.1
Cocaine response after cond. corrected2.22.55.90.9-2.40.0-1.8
Cocaine response after cond. not corrected3.74.17.41.5-2.71.1-2.3
Cocaine response before conditioning1.31.64.71.0-0.12.2-0.7
Saline control response0.10.10.20.30.10.20.4
Bone: connectivity density0.10.20.3-0.6-0.2-0.4-0.4
Bone: cortical apparent density5.57.29.73.0-3.11.9-2.6
Bone: cortical area10.716.223.3-4.83.9-3.83.5
Bone: cortical porosity0.80.91.5-1.21.0-0.90.7
Bone: cortical porosity1.92.02.7-1.61.6-1.21.2
Bone: cortical thickness7.412.117.6-4.23.0-3.62.9
Bone: cortical thickness9.110.513.2-3.42.8-3.63.1
Bone: cortical tissue density6.38.310.93.2-3.32.1-2.8
Condit. Reinf. active minus inactive responses2.52.84.71.2-1.91.1-2.2
Condit. Reinf. active-inactive response ratio2.52.73.51.5-1.71.5-1.9
Condit. Reinf. active responses0.60.71.6-0.4-1.0-0.4-1.3
Condit. Reinf. inactive responses1.31.63.4-1.80.5-1.60.2
Incentive salience index mean1.51.93.70.7-1.80.3-1.9
Condit. Reinf. lever presses0.70.91.70.2-1.3-0.7-1.2
Condit. Reinf. active minus inactive responses1.11.32.3-1.41.5-0.51.0
Condit. Reinf. active-inactive response ratio2.42.54.2-1.52.0-0.91.6
Condit. Reinf. active responses1.11.62.6-1.51.6-0.61.0
Condit. Reinf. inactive responses0.20.30.6-0.80.6-0.00.2
Condit. Reinf. lever presses1.11.52.8-1.71.2-0.80.9
Condit. Reinf. lever reinforcers received0.40.61.1-1.11.0-0.10.5
Conditioned reinforcement - actives5.05.05.72.4-2.22.1-2.2
Conditioned reinforcement - inactives0.30.30.40.7-0.60.3-0.6
Conditioned locomotion4.25.15.92.1-2.42.1-2.4
Patch foraging indifference point 0 sec5.48.610.9-3.32.9-2.82.7
Patch foraging indifference point AUC0.60.71.4-0.41.0-0.61.2
Delay disc. indifference point, 0s delay1.21.31.8-1.11.0-1.31.1
Delay disc. indifference point, 16s delay0.60.61.30.21.10.11.1
Delay disc. indifference point, 2s delay0.30.40.70.00.5-0.80.8
Delay disc. indifference point, 24s delay1.00.91.6-0.31.2-0.71.3
Delay disc. indifference point, 4s delay0.70.81.4-0.21.1-0.71.2
Delay disc. indifference point, 8s delay0.40.40.90.10.7-0.30.9
Indifference point function ln k0.20.30.7-0.9-0.2-0.6-0.2
Indifference point function log k0.20.30.7-0.9-0.2-0.6-0.2
Patch foraging total patch changes 0 sec6.510.513.4-3.73.2-3.03.0
Patch foraging total patch changes 12 sec3.95.05.7-2.42.3-2.02.2
Patch foraging total patch changes 18 sec2.22.83.7-1.91.7-1.51.6
Patch foraging total patch changes 24 sec0.70.81.1-0.71.1-0.61.1
Patch foraging total patch changes 6 sec4.66.87.7-2.82.7-2.22.7
Patch foraging time to switch 0 sec1.52.32.81.7-1.51.5-1.5
Patch foraging water rate 0 sec3.35.36.8-2.62.1-2.32.2
Patch foraging water rate 12 sec2.74.15.3-2.32.2-1.62.0
Patch foraging water rate 18 sec1.72.23.2-1.81.1-1.61.4
Patch foraging water rate 24 sec5.37.410.6-3.32.1-2.92.4
Patch foraging water rate 6 sec2.13.15.3-2.31.4-1.81.5
Seeking ratio, delayed vs. immediate footshock8.59.812.13.3-3.52.3-3.3
Distance traveled before self-admin0.20.20.50.4-0.2-0.70.4
Distance traveled after self-admin0.60.71.31.1-1.00.3-0.6
Extensor digitorum longus weight1.55.810.1-3.22.4-1.82.0
Bone: elastic displacement0.40.50.9-0.50.7-0.60.9
Bone: elastic work4.55.78.1-2.31.9-2.82.4
Bone: endosteal estimation1.73.75.4-2.31.8-1.91.6
Bone: endosteal perimeter3.36.87.9-2.72.8-2.32.6
Epididymis fat weight26.261.197.5-9.97.7-6.86.5
Delta time in closed arm before/after self-admin0.40.40.90.1-1.00.0-0.8
Delta time in open arm before/after self-admin0.60.51.80.10.61.3-0.2
Diff in mean of infusions in LGA sessions0.70.81.8-0.21.4-0.21.2
Delay discount exponential model param1.31.42.80.3-1.50.7-1.7
Extinction: sum of active levers before priming0.10.10.20.40.30.50.1
Active lever presses in extinction session 63.23.14.5-1.32.0-1.62.1
Bone: final force8.613.819.9-4.53.2-3.93.1
Bone: final moment8.814.321.1-4.63.3-3.93.2
Food consumed during 24 hour testing period0.30.31.0-1.00.3-0.20.3
Glucose5.88.714.9-2.73.9-1.63.2
Heart weight8.211.715.5-3.93.6-2.73.3
Delay discount hyperbolic model param1.21.32.40.2-1.40.8-1.6
Intermittent access intake day 1-15 change0.10.10.3-0.20.5-0.00.5
Intermittent access intake escalation0.10.10.1-0.30.2-0.20.3
Intermittent access intake escalation 20.20.20.4-0.60.4-0.20.4
Intermitt. access day 1 inactive lever presses0.80.81.2-0.91.1-0.60.9
Intermitt. access day 15 inactive lever presses2.62.93.8-1.51.7-1.61.9
Intermitt. access escalation Index0.20.20.30.1-0.40.3-0.5
Intermittent access day 1 total infusions0.40.40.80.9-0.60.5-0.5
Intermittent access day 15 total infusions0.10.10.30.5-0.30.3-0.2
Intermittent access terminal intake (last 3 days)0.00.00.10.3-0.00.30.1
Intermittent access total infusions0.70.71.21.1-0.70.9-0.6
Intermittent access day 1 locomotion2.02.13.01.7-1.71.1-1.3
Intermittent access day 15 total locomotion0.10.10.20.20.50.20.4
Intermittent access total locomotion1.01.11.71.3-1.20.7-0.9
Intermittent access standard deviation0.40.41.00.7-0.11.0-0.3
Left kidney weight10.429.353.5-7.34.0-5.64.0
Right kidney weight10.028.151.5-7.23.8-5.54.0
Cocaine induced anxiety3.74.24.92.1-2.21.9-2.0
Post-drug Anxiety1.11.31.71.3-0.91.3-1.0
Baseline Anxiety1.21.32.5-0.91.6-0.71.2
Tail length0.82.43.6-1.71.9-0.91.5
Length with tail2.710.115.4-3.93.1-2.82.7
Length without tail3.67.914.7-3.82.3-2.72.0
Times rat made contact with spout1.01.12.2-1.51.0-0.90.8
Lifetime Intake0.80.91.51.2-0.90.8-0.7
Liver weight, left5.18.111.5-3.42.8-2.62.4
Liver weight, right6.911.418.2-4.33.3-3.02.7
Locomotor activity0.10.20.40.3-0.40.6-0.5
Locomotor testing distance0.20.40.70.4-0.90.2-0.7
Locomotor testing rearing0.10.20.5-0.20.50.00.7
Locomotion in novel chamber1.11.43.0-1.30.4-1.70.9
Locomotion in novel chamber post-restriction0.50.72.1-0.5-0.1-1.40.6
Fecal boli incidents, locomotor time 10.30.30.8-0.00.90.50.5
Change in fecal boli incidents, locomotor task0.30.30.9-1.0-0.0-0.6-0.1
Time >=10cm from walls, locomotor time 10.30.30.40.6-0.50.6-0.6
Bouts of movement, locomotor time 10.10.10.2-0.30.40.10.1
Total resting periods, locomotor time 10.10.10.3-0.50.4-0.10.2
Rest time, locomotor task time 10.60.71.8-1.3-0.1-0.90.1
Distance moved, locomotor task time 10.10.20.50.70.2-0.10.3
Vertical activity count, locomotor time 10.30.31.01.0-0.3-0.0-0.1
Time >=10cm from walls, locomotor time 20.20.20.4-0.50.0-0.70.1
Bouts of movement, locomotor time 20.10.10.20.3-0.10.4-0.1
Total resting periods, locomotor time 20.10.10.20.4-0.10.4-0.1
Rest time, locomotor task time 20.10.10.30.2-0.20.6-0.2
Distance moved, locomotor task time 20.20.20.8-0.2-0.1-0.90.1
Vertical activity count, locomotor time 20.20.20.30.3-0.6-0.3-0.4
Light reinforcement 10.30.51.3-0.3-0.6-1.1-0.2
Light reinforcement 20.30.40.50.7-0.60.1-0.7
Bone: marrow area1.94.16.0-2.51.9-2.01.7
Bone: maximum diameter4.68.411.2-3.33.2-2.32.6
Bone: maximum force6.912.018.5-4.32.8-3.92.6
Bone: maximum moment6.912.019.0-4.42.8-3.82.6
Mean time between licks in bursts1.31.84.10.8-0.92.0-1.4
Mean num. licks in bursts0.91.02.1-1.30.2-1.50.5
Cd content in liver2.12.23.31.1-1.81.1-1.8
Co content in liver0.30.41.0-0.5-0.4-1.0-0.2
Cu content in liver0.30.30.5-0.70.7-0.30.6
Fe content in liver0.10.10.10.3-0.10.3-0.2
K content in liver0.40.40.7-0.50.80.20.8
Mg content in liver0.90.91.9-0.51.2-0.21.4
Mn content in liver0.40.50.8-0.80.3-0.90.6
Na content in liver3.13.35.5-1.52.3-0.72.2
Rb content in liver0.20.30.70.9-0.20.5-0.0
Se content in liver0.10.20.40.5-0.10.6-0.1
Sr content in liver1.21.12.01.4-1.30.6-0.7
Zn content in liver0.50.50.8-0.80.3-0.90.8
Bone: minimum diameter5.310.013.5-3.73.2-2.92.8
Time in familiar zone, hab. session 12.72.53.3-1.41.8-1.41.7
Time in novel zone, hab. session 15.65.56.42.4-2.12.5-2.3
Total zone transitions, hab. session 10.20.20.5-0.10.2-0.70.6
Total locomotion distance, hab. session 10.30.40.60.7-0.40.7-0.5
Locomotion velocity, hab. session 10.10.20.30.4-0.40.5-0.5
Time in familiar zone, hab. session 20.80.91.30.9-0.51.1-1.1
Time in novel zone, hab. session 20.30.30.5-0.60.4-0.60.7
Total zone transitions, hab. session 20.30.30.6-0.40.4-0.70.7
Total locomotion distance, hab. session 20.20.30.5-0.70.6-0.40.4
Locomotion velocity, hab. session 20.40.60.8-0.90.8-0.60.7
Novel to familiar place preference ratio0.60.71.10.5-0.61.1-1.0
Novelty place preference0.70.71.30.6-0.61.1-1.0
Time in novel zone, NPP test0.91.02.10.6-0.51.5-1.1
Total zone transitions, NPP test0.60.81.7-1.10.2-1.30.4
Total locomotion distance, NPP test0.10.20.4-0.6-0.2-0.6-0.1
Locomotion velocity, NPP test0.40.61.5-0.8-0.4-1.2-0.0
Intraocular pressure0.00.10.10.30.1-0.1-0.3
Delta distance traveled before/after self-admin1.11.21.51.0-1.21.0-1.2
Delta ambulatory time before/after self-admin1.01.11.50.9-1.20.9-1.2
Parametrial fat weight19.137.355.6-7.56.1-5.45.2
Pavlov. Cond. lever latency1.01.22.71.2-0.61.6-0.7
Pavlov. Cond. magazine entry latency0.60.81.3-1.10.6-1.10.5
Pavlov. Cond. change in total contacts1.31.42.4-1.61.3-0.90.8
Pavlov. Cond. index score0.91.22.0-1.40.8-1.30.7
Pavlov. Cond. latency score0.81.01.7-1.30.8-1.20.6
Pavlov. Cond. lever contacts1.21.41.9-1.31.1-1.40.9
Pavlov. Cond. magazine entry number0.50.61.31.1-0.50.8-0.3
Pavlov. Cond. intertrial magazine entries1.41.73.9-2.00.5-1.50.4
Pavlov. Cond. lever-magazine prob. diff.0.91.11.9-1.40.8-1.20.6
Pavlov. Cond. response bias0.81.01.7-1.20.7-1.30.6
Pavlov. Cond. lever latency0.30.41.21.1-0.60.2-0.2
Pavlov. Cond. magazine entry latency0.40.40.80.9-0.20.8-0.5
Pavlov. Cond. change in total contacts0.10.20.4-0.30.40.70.1
Pavlov. Cond. index score0.00.00.1-0.20.10.3-0.2
Pavlov. Cond. latency score0.00.00.1-0.20.10.3-0.1
Pavlov. Cond. lever contacts0.20.30.7-0.80.5-0.00.2
Pavlov. Cond. magazine entry number0.10.10.2-0.40.1-0.30.2
Pavlov. Cond. intertrial magazine entries4.05.28.0-2.81.8-2.51.9
Pavlov. Cond. lever-magazine prob. diff.0.00.00.1-0.00.10.3-0.2
Pavlov. Cond. response bias0.10.10.3-0.20.20.6-0.3
Time in closed arm before self-admin0.10.10.30.50.30.20.3
Time in closed arm after self-admin0.20.20.40.6-0.60.2-0.3
Time in open arm before self-admin0.60.60.80.9-0.80.7-0.7
Time in open arm after self-admin0.70.82.50.70.31.6-0.3
Bone: periosteal estimation7.014.521.2-4.63.5-3.83.2
Bone: periosteal perimeter9.716.219.7-4.44.2-3.63.8
Bone: post-yield work0.40.61.3-1.10.3-1.0-0.0
Progressive ratio test 1 active lever presses0.70.71.21.1-1.00.5-0.7
Progressive ratio test 1 breakpoint0.50.51.21.1-0.70.5-0.4
Progressive ratio test 1 inactive lever presses0.50.60.80.8-0.90.6-0.7
Progressive ratio test 2 active lever presses0.80.81.3-0.70.9-0.81.1
Progressive ratio test 2 breakpoint0.80.91.4-0.70.9-1.01.2
Progressive ratio test 2 inactive lever presses0.00.00.1-0.3-0.10.0-0.1
Incentive Sensitization - Responses2.32.42.6-1.51.6-1.41.6
Incentive Sensitization - Breakpoint1.91.92.2-1.41.5-1.31.5
Sum of active levers in priming session hrs 5-60.00.00.10.10.10.3-0.0
Progressive ratio1.92.23.41.8-1.41.4-1.1
Food seeking constrained by brief footshock5.36.511.23.4-2.22.4-2.0
Seeking ratio, punishment vs. effort0.10.10.10.2-0.3-0.1-0.3
Retroperitoneal fat weight33.7110.7165.2-12.99.9-10.28.7
Reaction time number correct0.30.50.8-0.80.9-0.20.7
Reaction time mean minus median0.20.30.60.10.5-0.50.7
Reaction time mean minus median AUC0.81.02.1-0.31.0-1.01.5
Reaction time num false alarms0.70.91.9-1.3-0.1-1.4-0.0
Reaction time num false alarms AUC1.11.53.0-1.60.4-1.70.4
Reaction time trials correct on left0.30.50.8-0.80.9-0.20.7
Reaction time trials on left0.30.40.8-0.70.9-0.10.7
Reaction time mean0.81.13.51.9-0.60.7-0.2
Reaction time mean AUC0.81.13.71.9-0.60.7-0.2
Median of all reaction times1.01.34.22.0-0.70.7-0.3
Reaction time omissions0.40.61.21.1-0.31.0-0.4
Reaction time false alarm rate0.60.82.2-1.0-0.2-1.5-0.1
Reaction time premature initiation rate0.10.10.40.1-0.1-0.60.3
Reaction time premature initiations0.30.50.6-0.50.6-0.80.8
Std. dev. reaction times0.10.20.30.30.4-0.30.6
Reaction time trials completed0.30.40.8-0.70.9-0.10.7
Reaction time trials AUC0.50.71.1-1.01.1-0.30.8
Run reversals in cocaine runway, females0.40.30.80.9-0.10.7-0.2
Run reversals in cocaine runway, males0.10.10.30.1-0.5-0.40.1
Latency to leave start box in cocaine runway0.80.91.91.00.81.40.4
Latency to leave start box in cocaine runway, F0.40.40.70.10.90.80.5
Latency to leave start box in cocaine runway, M0.40.40.70.80.40.60.4
Std. dev. time between licks in bursts2.63.13.71.4-1.71.9-1.9
Total sessions with >9 infusions0.20.30.70.5-0.9-0.1-0.3
Short access day 1 total inactive lever presses1.71.92.71.0-1.61.1-1.7
Short access day 10 total inactive lever presses2.42.65.0-2.21.0-1.91.1
Short access day 1 total infusions1.01.11.91.1-1.40.5-1.0
Short access day 10 total infusions1.41.62.81.7-1.11.2-1.0
Short access total infusions0.91.11.81.3-1.20.6-0.8
Short access day 1 locomotion0.20.20.30.6-0.50.2-0.2
Short access day 10 total locomotion0.60.61.11.0-0.80.7-0.6
Short access total locomotion0.60.61.31.1-1.10.2-0.4
One hour access (0.3 mA shock)0.40.50.91.0-0.40.8-0.4
Compulsive drug intake0.10.10.2-0.2-0.3-0.2-0.5
One hour access (shock baseline)0.60.71.31.2-0.51.0-0.4
Social response proportion0.40.40.6-0.8-0.5-0.7-0.6
Social responses1.31.72.9-1.71.4-1.11.0
Social time0.20.20.5-0.40.7-0.00.6
Soleus weight4.011.814.7-3.82.9-3.83.2
Bone: stiffness2.84.47.3-2.71.6-2.41.5
Tibialis anterior weight0.10.50.9-1.00.8-0.20.5
Time to tail flick, vehicle, before self-admin0.10.20.3-0.3-0.20.5-0.5
Time to tail flick, vehicle, after self-admin0.60.60.8-0.90.8-0.50.8
Time to tail flick, test, before self-admin0.30.30.50.7-0.7-0.1-0.3
Time to tail flick, test, after self-admin0.10.10.3-0.10.10.6-0.2
Delta time to tail flick, vehicle, before/after SA3.73.75.4-1.52.2-1.52.3
Delta time to tail flick, test, before/after SA0.50.51.2-1.10.80.20.1
Tibia length0.30.91.6-1.30.7-1.00.6
Ambulatory time before self-admin0.20.20.50.10.0-0.70.5
Ambulatory time after self-admin1.21.32.31.5-1.30.5-0.9
Bone: tissue strength0.60.61.40.9-0.21.2-0.4
Total heroin consumption5.86.89.0-2.33.0-2.22.8
Bone: trabecular number1.01.63.0-1.71.0-1.30.7
Bone: trabecular spacing4.15.37.12.7-1.92.5-2.1
Bone: trabecular thickness11.513.717.9-4.23.6-3.63.4
Bone: trabecular tissue density2.12.93.71.5-1.91.5-1.8
Water consumed over 24 hours0.20.20.4-0.70.2-0.30.4
Number of responses in last shaping day0.80.81.11.0-1.10.7-0.9