Zfp523

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose mRNA stability Zfp523 0.04 0.02 1.2e-05 0.04 0.05 0.04 0.03 2.1e-05 7.4e-06 3.5e-05 2.2e-04
2 Eye intron excision ratio chr20_6261412_6262086 0.5 0.2 7.2e-03 -0.01 0 -0 0.02 5.3e-01 3.0e-01 3.3e-01 1.8e-01
3 Liver gene expression Zfp523 0.04 0.03 1.4e-05 0.04 0.04 0.04 0.04 5.7e-05 3.0e-05 6.1e-05 4.0e-05
4 IC intron excision ratio chr20_6257951_6259934 0.12 0.07 6.7e-03 0.01 0.02 0 0.01 1.2e-01 3.6e-02 2.6e-01 1.5e-01

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density0.00.10.10.0-0.30.00.4
Area under the delay curve0.30.51.2-0.10.5-0.61.1
BMI with tail2.06.910.9-3.33.1-2.60.7
BMI without tail0.73.86.0-2.32.4-2.00.4
Body weight2.29.815.2-2.63.9-3.81.6
Weight adjusted by age0.31.02.80.10.6-0.91.7
Bone surface0.10.10.30.5-0.30.1-0.2
Bone volume0.00.00.1-0.00.2-0.30.3
Breakpoint value in progressive ratio session0.30.61.1-1.00.4-0.6-0.8
Number of licking bursts0.51.51.81.1-1.11.3-1.4
Context. condit. distance diff. score1.72.13.41.8-1.51.4-0.9
Locomotion velocity, session 11.82.03.92.0-1.51.40.4
Locomotion distance, session 12.12.74.31.7-1.92.1-0.5
Locomotion velocity, session 21.01.21.31.1-1.01.1-1.1
Locomotion distance, session 20.71.01.41.2-1.11.1-0.0
Locomotion velocity, session 30.30.30.60.50.00.8-0.7
Locomotion distance, session 31.01.12.21.1-0.91.5-0.5
Stereotopy head waving bouts, day 30.10.20.30.10.5-0.4-0.5
Stereotopy head waving duration, day 30.10.10.30.6-0.20.00.1
Locomotion velocity, session 70.50.61.40.8-0.30.31.2
Locomotion distance, session 71.11.42.31.5-1.11.01.1
Stereotopy head waving bouts, day 70.00.00.10.10.30.2-0.2
Stereotopy head waving duration, day 70.10.10.4-0.30.6-0.1-0.3
Locomotion velocity, session 81.51.83.81.9-1.31.1-0.7
Locomotion distance, session 82.13.14.62.2-1.81.9-1.0
Degree of sensitization distance0.30.30.7-0.00.2-0.90.7
Degree of sensitization stereotypy0.20.30.60.3-0.30.8-0.4
Conditioned locomotion1.51.72.6-1.41.6-1.6-0.1
Cocaine response after cond. corrected0.40.60.9-1.00.9-0.6-0.6
Cocaine response after cond. not corrected0.20.30.7-0.30.5-0.3-0.8
Cocaine response before conditioning0.50.61.51.2-0.80.6-0.0
Saline control response2.33.25.0-2.21.8-2.00.8
Bone: connectivity density0.10.10.20.1-0.3-0.10.5
Bone: cortical apparent density0.40.61.5-1.20.8-0.5-0.3
Bone: cortical area0.00.00.00.20.00.10.2
Bone: cortical porosity0.70.81.21.1-0.60.61.1
Bone: cortical porosity1.21.32.81.3-0.70.41.7
Bone: cortical thickness0.10.10.2-0.4-0.00.40.2
Bone: cortical thickness1.01.32.9-1.71.1-0.90.2
Bone: cortical tissue density0.40.61.3-1.10.8-0.5-0.3
Condit. Reinf. active minus inactive responses0.50.51.60.6-0.40.11.3
Condit. Reinf. active-inactive response ratio0.40.40.6-0.80.5-0.70.5
Condit. Reinf. active responses0.50.62.00.00.2-0.51.4
Condit. Reinf. inactive responses0.20.20.8-0.10.2-0.20.9
Incentive salience index mean0.40.61.01.0-0.60.40.8
Condit. Reinf. lever presses0.30.51.21.1-0.70.50.2
Condit. Reinf. active minus inactive responses0.40.61.11.0-0.90.60.2
Condit. Reinf. active-inactive response ratio0.20.20.50.7-0.60.30.1
Condit. Reinf. active responses0.40.61.01.0-0.90.70.1
Condit. Reinf. inactive responses0.00.00.0-0.00.1-0.1-0.0
Condit. Reinf. lever presses1.52.23.91.6-2.01.40.5
Condit. Reinf. lever reinforcers received0.81.21.81.4-1.31.00.2
Conditioned reinforcement - actives0.10.31.20.10.2-0.31.1
Conditioned reinforcement - inactives0.10.20.30.5-0.40.40.5
Conditioned locomotion1.11.64.2-0.11.0-1.12.0
Patch foraging indifference point 0 sec0.41.12.2-1.51.0-1.00.5
Patch foraging indifference point AUC0.61.41.81.4-1.11.2-1.0
Delay disc. indifference point, 0s delay0.10.10.20.3-0.0-0.00.4
Delay disc. indifference point, 16s delay0.20.31.10.10.1-0.21.1
Delay disc. indifference point, 2s delay0.30.40.80.6-0.50.00.9
Delay disc. indifference point, 24s delay1.11.74.3-0.41.1-1.12.1
Delay disc. indifference point, 4s delay0.30.30.5-0.40.7-0.70.2
Delay disc. indifference point, 8s delay0.60.91.8-0.40.9-1.01.3
Indifference point function ln k0.10.40.60.7-0.80.7-0.2
Indifference point function log k0.10.40.60.7-0.80.7-0.2
Patch foraging total patch changes 0 sec0.41.12.1-1.51.0-1.00.5
Patch foraging total patch changes 12 sec0.10.20.5-0.2-0.20.4-0.7
Patch foraging total patch changes 18 sec0.51.32.8-1.71.2-0.9-0.3
Patch foraging total patch changes 24 sec0.10.20.6-0.80.2-0.10.3
Patch foraging total patch changes 6 sec0.40.61.4-1.20.8-0.60.3
Patch foraging time to switch 0 sec1.03.96.7-2.62.2-2.00.4
Patch foraging water rate 0 sec0.10.30.50.7-0.70.50.3
Patch foraging water rate 12 sec0.10.30.70.3-0.50.9-0.4
Patch foraging water rate 18 sec0.10.30.7-0.40.2-0.50.9
Patch foraging water rate 24 sec0.40.61.00.3-0.71.0-1.0
Patch foraging water rate 6 sec0.30.40.70.5-0.60.9-0.7
Seeking ratio, delayed vs. immediate footshock0.60.83.0-0.40.00.2-1.7
Distance traveled before self-admin0.30.72.1-0.50.5-0.2-1.5
Distance traveled after self-admin0.40.82.2-0.70.4-0.4-1.5
Extensor digitorum longus weight0.41.72.71.6-1.71.1-0.6
Bone: elastic displacement0.50.61.80.6-0.30.31.3
Bone: elastic work0.40.62.0-0.10.2-0.41.4
Bone: endosteal estimation0.61.53.5-0.61.4-1.90.1
Bone: endosteal perimeter0.20.51.0-0.20.9-1.0-0.6
Epididymis fat weight2.613.127.1-5.24.0-2.90.9
Delta time in closed arm before/after self-admin1.51.41.9-1.11.4-1.21.1
Delta time in open arm before/after self-admin0.20.20.40.4-0.60.4-0.3
Diff in mean of infusions in LGA sessions0.10.10.3-0.4-0.10.0-0.5
Delay discount exponential model param0.30.41.20.1-0.40.6-1.1
Extinction: sum of active levers before priming0.10.10.30.1-0.30.4-0.5
Active lever presses in extinction session 61.51.54.0-0.70.7-1.02.0
Bone: final force3.15.17.3-2.62.7-2.40.6
Bone: final moment2.43.95.4-2.22.3-2.20.8
Food consumed during 24 hour testing period0.91.82.8-1.61.3-1.7-0.1
Glucose1.42.25.22.3-1.51.10.6
Heart weight1.52.42.91.7-1.61.01.7
Delay discount hyperbolic model param0.20.30.9-0.2-0.20.3-0.9
Intermittent access intake day 1-15 change0.21.01.4-1.21.1-0.9-0.7
Intermittent access intake escalation0.31.42.1-1.41.4-1.2-0.4
Intermittent access intake escalation 20.10.10.2-0.10.3-0.50.1
Intermitt. access day 1 inactive lever presses0.33.76.51.0-2.01.9-2.6
Intermitt. access day 15 inactive lever presses0.00.10.4-0.20.1-0.2-0.7
Intermitt. access escalation Index0.61.84.40.4-1.11.2-2.1
Intermittent access day 1 total infusions0.72.14.61.4-1.20.72.1
Intermittent access day 15 total infusions0.10.31.00.00.1-0.21.0
Intermittent access terminal intake (last 3 days)0.20.41.40.20.1-0.11.2
Intermittent access total infusions0.60.72.20.7-0.40.21.5
Intermittent access day 1 locomotion0.10.10.50.3-0.1-0.00.7
Intermittent access day 15 total locomotion0.82.94.5-1.42.1-2.01.1
Intermittent access total locomotion0.60.81.3-0.30.8-1.01.1
Intermittent access standard deviation0.31.82.9-1.71.5-1.4-0.2
Left kidney weight0.64.87.9-2.02.8-2.60.6
Right kidney weight1.28.113.8-2.63.7-3.40.7
Cocaine induced anxiety0.30.82.10.5-0.60.6-1.4
Post-drug Anxiety0.20.20.8-0.1-0.00.0-0.9
Baseline Anxiety0.61.01.6-1.31.1-0.90.7
Tail length0.10.41.31.10.3-0.4-0.1
Length with tail0.31.42.70.61.2-1.61.0
Length without tail0.84.07.0-1.02.2-2.61.8
Times rat made contact with spout0.20.20.50.0-0.70.60.3
Lifetime Intake0.50.72.50.4-0.1-0.21.6
Liver weight, left0.30.61.1-0.40.9-1.1-0.5
Liver weight, right0.30.51.20.80.4-0.3-1.1
Locomotor activity0.50.82.90.1-0.20.5-1.7
Locomotor testing distance0.30.72.4-0.70.10.2-1.6
Locomotor testing rearing0.31.21.5-1.21.0-0.8-1.2
Locomotion in novel chamber0.20.20.50.4-0.70.50.1
Locomotion in novel chamber post-restriction0.82.33.2-1.71.8-1.70.6
Fecal boli incidents, locomotor time 10.30.81.4-0.60.5-1.01.2
Change in fecal boli incidents, locomotor task0.20.20.4-0.40.5-0.2-0.6
Time >=10cm from walls, locomotor time 12.32.84.3-2.11.7-1.7-1.1
Bouts of movement, locomotor time 10.50.61.80.2-0.60.5-1.3
Total resting periods, locomotor time 10.30.31.10.2-0.40.3-1.0
Rest time, locomotor task time 10.30.51.31.1-0.40.60.3
Distance moved, locomotor task time 10.20.71.3-1.10.9-0.8-0.1
Vertical activity count, locomotor time 10.42.95.1-2.31.6-1.9-0.1
Time >=10cm from walls, locomotor time 21.95.47.5-2.22.7-2.71.4
Bouts of movement, locomotor time 20.20.52.10.3-0.10.2-1.4
Total resting periods, locomotor time 20.31.12.60.8-0.60.7-1.6
Rest time, locomotor task time 20.71.12.40.8-0.80.9-1.5
Distance moved, locomotor task time 24.05.36.1-2.02.4-2.52.2
Vertical activity count, locomotor time 21.74.15.2-1.72.0-2.32.0
Light reinforcement 10.73.34.9-2.22.0-1.5-1.4
Light reinforcement 21.12.43.5-1.71.9-1.7-0.5
Bone: marrow area0.71.84.0-0.71.6-2.00.2
Bone: maximum diameter0.30.51.61.3-0.50.4-0.3
Bone: maximum force0.71.31.8-1.11.4-1.30.7
Bone: maximum moment0.50.91.1-0.71.0-1.11.0
Mean time between licks in bursts0.95.37.92.8-2.32.2-1.7
Mean num. licks in bursts0.20.61.6-0.70.3-0.61.2
Cd content in liver1.71.93.3-1.11.0-1.51.8
Co content in liver4.14.96.0-2.42.4-2.41.5
Cu content in liver0.20.30.6-0.1-0.70.8-0.2
Fe content in liver0.70.81.6-0.91.3-1.00.2
K content in liver1.51.52.41.6-1.31.3-0.2
Mg content in liver2.32.63.61.9-1.81.6-1.1
Mn content in liver2.02.23.92.0-1.41.2-1.2
Na content in liver0.40.51.00.3-0.40.8-1.0
Rb content in liver0.30.30.6-0.30.3-0.70.8
Se content in liver4.65.59.13.0-2.52.3-1.0
Sr content in liver0.90.72.2-0.30.4-0.81.5
Zn content in liver1.01.22.11.5-1.30.90.2
Bone: minimum diameter0.10.20.6-0.10.6-0.80.1
Time in familiar zone, hab. session 10.10.20.6-0.10.10.00.8
Time in novel zone, hab. session 10.00.10.20.10.1-0.0-0.4
Total zone transitions, hab. session 12.12.95.11.5-1.82.3-1.1
Total locomotion distance, hab. session 12.33.35.11.8-1.82.3-1.2
Locomotion velocity, hab. session 12.23.24.91.8-1.82.2-1.1
Time in familiar zone, hab. session 21.41.64.70.1-0.81.0-2.2
Time in novel zone, hab. session 22.42.66.5-0.51.2-1.52.5
Total zone transitions, hab. session 21.31.63.60.6-0.81.4-1.9
Total locomotion distance, hab. session 23.14.06.01.3-1.72.3-2.4
Locomotion velocity, hab. session 23.85.17.21.6-2.12.7-2.5
Novel to familiar place preference ratio0.30.31.0-0.20.4-0.31.0
Novelty place preference0.20.20.8-0.00.3-0.20.9
Time in novel zone, NPP test0.20.30.9-0.10.4-0.30.9
Total zone transitions, NPP test1.82.64.01.7-1.72.0-0.9
Total locomotion distance, NPP test0.60.81.30.9-1.01.1-0.0
Locomotion velocity, NPP test0.91.32.31.0-1.31.5-0.5
Intraocular pressure0.20.40.7-0.50.8-0.70.4
Delta distance traveled before/after self-admin0.20.20.5-0.2-0.1-0.40.7
Delta ambulatory time before/after self-admin0.00.10.2-0.2-0.1-0.40.3
Parametrial fat weight2.96.810.3-3.23.0-2.7-0.7
Pavlov. Cond. lever latency3.34.28.4-2.92.0-2.1-0.5
Pavlov. Cond. magazine entry latency2.83.77.12.7-2.01.9-0.2
Pavlov. Cond. change in total contacts0.50.51.31.2-0.30.50.6
Pavlov. Cond. index score3.13.98.22.9-1.91.90.4
Pavlov. Cond. latency score2.93.77.72.8-1.81.90.3
Pavlov. Cond. lever contacts2.12.65.42.3-1.51.50.7
Pavlov. Cond. magazine entry number2.83.66.2-2.52.1-2.00.3
Pavlov. Cond. intertrial magazine entries1.62.03.0-1.21.2-1.31.7
Pavlov. Cond. lever-magazine prob. diff.3.13.98.02.8-1.91.90.5
Pavlov. Cond. response bias3.74.68.83.0-2.22.2-0.0
Pavlov. Cond. lever latency0.91.21.8-1.11.3-1.0-0.9
Pavlov. Cond. magazine entry latency0.30.41.00.00.4-0.81.0
Pavlov. Cond. change in total contacts0.20.40.60.6-0.80.40.7
Pavlov. Cond. index score0.30.51.10.8-0.60.21.1
Pavlov. Cond. latency score0.20.40.80.6-0.50.20.9
Pavlov. Cond. lever contacts0.60.91.20.9-1.10.71.0
Pavlov. Cond. magazine entry number0.30.40.80.4-0.40.8-0.9
Pavlov. Cond. intertrial magazine entries1.32.96.21.2-1.31.5-2.5
Pavlov. Cond. lever-magazine prob. diff.0.30.41.10.6-0.50.11.0
Pavlov. Cond. response bias0.71.01.61.1-0.90.51.3
Time in closed arm before self-admin0.00.10.10.2-0.30.10.3
Time in closed arm after self-admin0.50.62.20.00.2-0.21.5
Time in open arm before self-admin0.30.40.70.8-0.60.70.1
Time in open arm after self-admin0.60.71.00.9-1.00.7-0.6
Bone: periosteal estimation0.20.51.2-0.30.9-1.10.0
Bone: periosteal perimeter0.10.10.2-0.10.4-0.4-0.3
Bone: post-yield work0.20.30.60.30.2-0.70.8
Progressive ratio test 1 active lever presses0.30.51.90.10.1-0.31.4
Progressive ratio test 1 breakpoint0.30.51.80.2-0.1-0.11.3
Progressive ratio test 1 inactive lever presses0.20.61.2-1.10.8-0.70.1
Progressive ratio test 2 active lever presses0.10.10.40.20.10.10.6
Progressive ratio test 2 breakpoint0.10.10.50.20.00.10.7
Progressive ratio test 2 inactive lever presses0.10.40.80.9-0.40.40.7
Incentive Sensitization - Responses0.41.01.40.8-1.11.2-0.8
Incentive Sensitization - Breakpoint0.30.70.90.6-0.91.0-0.9
Sum of active levers in priming session hrs 5-60.10.10.20.4-0.40.20.4
Progressive ratio1.23.45.0-2.22.2-1.9-0.5
Food seeking constrained by brief footshock0.60.82.4-0.50.4-0.71.5
Seeking ratio, punishment vs. effort1.02.12.91.7-1.71.40.9
Retroperitoneal fat weight0.41.73.2-1.31.8-1.3-0.0
Reaction time number correct0.51.83.3-1.81.6-1.2-0.1
Reaction time mean minus median0.10.61.91.4-0.60.3-0.2
Reaction time mean minus median AUC0.10.71.51.2-0.4-0.11.0
Reaction time num false alarms1.01.62.51.0-1.21.2-1.6
Reaction time num false alarms AUC1.22.73.11.5-1.71.7-1.7
Reaction time trials correct on left0.51.83.3-1.81.6-1.2-0.1
Reaction time trials on left0.51.83.3-1.81.5-1.2-0.1
Reaction time mean0.20.30.80.5-0.0-0.60.9
Reaction time mean AUC0.20.51.10.30.4-0.91.1
Median of all reaction times0.30.51.10.10.3-0.81.1
Reaction time omissions0.20.41.30.4-0.30.1-1.1
Reaction time false alarm rate3.44.76.22.4-2.52.2-1.4
Reaction time premature initiation rate0.00.00.0-0.1-0.20.1-0.1
Reaction time premature initiations0.30.81.8-1.30.9-0.80.0
Std. dev. reaction times0.20.82.21.5-0.80.20.4
Reaction time trials completed0.51.83.3-1.81.5-1.2-0.1
Reaction time trials AUC0.51.93.5-1.91.6-1.2-0.1
Run reversals in cocaine runway, females1.11.24.1-0.30.4-0.72.0
Run reversals in cocaine runway, males0.50.51.61.3-0.60.40.1
Latency to leave start box in cocaine runway0.30.40.80.6-0.90.7-0.0
Latency to leave start box in cocaine runway, F0.20.30.60.4-0.80.50.1
Latency to leave start box in cocaine runway, M0.00.00.10.2-0.20.3-0.2
Std. dev. time between licks in bursts1.93.55.62.4-1.51.9-1.6
Total sessions with >9 infusions0.20.30.80.4-0.40.10.9
Short access day 1 total inactive lever presses0.30.51.40.8-0.2-0.11.2
Short access day 10 total inactive lever presses0.53.511.6-0.0-1.01.2-3.4
Short access day 1 total infusions0.40.81.30.9-0.90.41.1
Short access day 10 total infusions0.00.10.10.1-0.30.00.3
Short access total infusions0.40.52.00.3-0.2-0.21.4
Short access day 1 locomotion0.40.71.10.5-0.90.9-1.0
Short access day 10 total locomotion0.21.02.60.4-0.90.7-1.6
Short access total locomotion0.10.10.40.1-0.40.2-0.6
One hour access (0.3 mA shock)2.22.63.91.6-2.01.8-0.7
Compulsive drug intake1.52.23.50.9-1.91.3-1.7
One hour access (shock baseline)0.20.61.80.7-0.10.11.3
Social response proportion0.00.10.10.3-0.40.10.1
Social responses0.30.41.40.2-0.40.4-1.2
Social time2.43.79.31.2-1.41.4-3.0
Soleus weight0.72.26.02.4-1.30.9-0.5
Bone: stiffness0.61.11.7-1.21.3-1.1-0.1
Tibialis anterior weight0.20.71.20.4-1.10.8-0.8
Time to tail flick, vehicle, before self-admin1.72.16.9-0.90.9-0.2-2.6
Time to tail flick, vehicle, after self-admin0.10.10.30.4-0.60.3-0.2
Time to tail flick, test, before self-admin0.91.02.70.2-0.61.0-1.6
Time to tail flick, test, after self-admin0.40.40.70.8-0.40.7-0.5
Delta time to tail flick, vehicle, before/after SA1.61.75.90.6-0.80.12.4
Delta time to tail flick, test, before/after SA0.30.40.5-0.40.7-0.70.5
Tibia length0.61.72.9-0.81.7-1.6-0.7
Ambulatory time before self-admin0.10.31.3-0.20.10.1-1.1
Ambulatory time after self-admin0.20.31.0-0.40.0-0.2-1.0
Bone: tissue strength0.70.71.4-0.70.6-0.91.2
Total heroin consumption0.70.82.6-0.0-0.60.5-1.6
Bone: trabecular number0.10.10.30.2-0.50.30.4
Bone: trabecular spacing0.60.91.3-1.01.2-1.10.1
Bone: trabecular thickness0.40.50.7-0.40.7-0.90.8
Bone: trabecular tissue density0.20.30.80.9-0.40.40.4
Water consumed over 24 hours0.10.20.40.3-0.70.5-0.4
Number of responses in last shaping day1.92.54.42.1-1.51.31.2