Slc27a5

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 PL gene expression Slc27a5 0.02 0.01 9.9e-03 0 0.01 0.01 0 1.4e-01 2.3e-02 1.6e-02 1.4e-01
2 Adipose gene expression Slc27a5 0.06 0.04 1.4e-07 0.06 0.05 0.04 0.05 7.5e-07 3.6e-06 8.9e-05 5.7e-06
3 Liver gene expression Slc27a5 0.15 0.07 0.0e+00 0.16 0.19 0.18 0.18 5.5e-17 2.1e-20 5.0e-20 2.3e-19
4 Brain gene expression Slc27a5 0.12 0.08 1.3e-06 0.03 0.06 0.04 0.04 1.6e-03 6.4e-06 8.6e-05 5.6e-05

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density0.20.30.80.5-0.2-0.5-0.9
Area under the delay curve0.50.81.2-1.10.80.90.7
BMI with tail0.62.13.4-0.81.41.51.9
BMI without tail0.10.51.80.4-0.00.31.3
Body weight0.83.77.42.7-2.2-1.6-0.2
Weight adjusted by age0.41.21.71.3-1.1-1.0-0.9
Bone surface3.16.18.12.8-2.1-2.5-2.4
Bone volume2.54.96.12.5-1.9-2.3-2.2
Breakpoint value in progressive ratio session1.32.43.9-2.00.91.41.7
Number of licking bursts0.00.10.50.20.10.20.7
Context. condit. distance diff. score0.10.10.20.4-0.1-0.1-0.3
Locomotion velocity, session 10.70.81.10.7-1.0-0.8-1.1
Locomotion distance, session 13.54.55.72.0-2.4-2.1-2.0
Locomotion velocity, session 20.20.30.70.8-0.3-0.5-0.5
Locomotion distance, session 22.12.93.92.0-1.6-1.8-1.4
Locomotion velocity, session 30.00.10.20.40.1-0.2-0.2
Locomotion distance, session 31.21.42.81.2-0.6-1.1-1.7
Stereotopy head waving bouts, day 30.40.51.3-0.40.00.61.2
Stereotopy head waving duration, day 30.40.51.5-0.6-0.10.61.2
Locomotion velocity, session 70.30.30.50.1-0.6-0.5-0.7
Locomotion distance, session 70.10.10.20.2-0.4-0.3-0.4
Stereotopy head waving bouts, day 70.20.30.70.8-0.3-0.5-0.3
Stereotopy head waving duration, day 70.20.20.50.7-0.4-0.4-0.2
Locomotion velocity, session 80.10.20.20.3-0.5-0.4-0.4
Locomotion distance, session 80.60.91.21.1-0.7-0.9-1.0
Degree of sensitization distance0.30.30.8-0.5-0.10.40.9
Degree of sensitization stereotypy0.40.51.11.00.0-0.5-0.7
Conditioned locomotion0.00.00.10.2-0.3-0.10.0
Cocaine response after cond. corrected1.31.92.4-1.21.51.21.5
Cocaine response after cond. not corrected0.00.10.10.40.0-0.20.3
Cocaine response before conditioning7.08.411.43.4-3.0-2.8-2.3
Saline control response1.01.32.41.6-0.7-1.1-1.1
Bone: connectivity density0.10.20.40.30.6-0.1-0.6
Bone: cortical apparent density0.10.20.5-0.70.20.30.5
Bone: cortical area1.01.62.31.5-1.3-1.2-1.1
Bone: cortical porosity0.40.40.6-0.40.60.60.8
Bone: cortical porosity0.20.20.5-0.00.50.40.7
Bone: cortical thickness0.20.30.5-0.70.40.60.6
Bone: cortical thickness0.10.20.30.6-0.3-0.4-0.2
Bone: cortical tissue density0.20.20.5-0.70.30.30.5
Condit. Reinf. active minus inactive responses0.20.30.9-0.10.20.40.9
Condit. Reinf. active-inactive response ratio1.21.32.0-0.81.11.11.4
Condit. Reinf. active responses0.10.20.40.6-0.4-0.40.1
Condit. Reinf. inactive responses2.33.03.21.6-1.8-1.8-1.7
Incentive salience index mean0.20.20.30.6-0.5-0.30.3
Condit. Reinf. lever presses0.60.91.31.1-1.1-0.9-0.4
Condit. Reinf. active minus inactive responses3.24.95.32.1-2.3-2.2-2.3
Condit. Reinf. active-inactive response ratio2.64.24.52.0-2.1-2.1-2.0
Condit. Reinf. active responses3.75.36.02.1-2.5-2.3-2.4
Condit. Reinf. inactive responses0.20.20.40.3-0.6-0.4-0.5
Condit. Reinf. lever presses0.20.20.30.6-0.5-0.4-0.5
Condit. Reinf. lever reinforcers received4.86.87.32.5-2.6-2.6-2.7
Conditioned reinforcement - actives0.10.41.30.3-0.20.11.2
Conditioned reinforcement - inactives0.71.93.81.4-1.9-1.3-0.4
Conditioned locomotion0.20.31.1-0.2-0.00.31.1
Patch foraging indifference point 0 sec0.10.20.4-0.40.20.60.6
Patch foraging indifference point AUC0.40.91.6-0.01.30.81.1
Delay disc. indifference point, 0s delay0.60.71.80.5-0.6-0.7-1.4
Delay disc. indifference point, 16s delay1.92.73.0-1.71.71.51.7
Delay disc. indifference point, 2s delay0.20.30.6-0.80.10.50.4
Delay disc. indifference point, 24s delay0.91.52.2-1.11.21.21.5
Delay disc. indifference point, 4s delay0.10.10.10.2-0.1-0.3-0.3
Delay disc. indifference point, 8s delay0.50.81.4-1.20.50.90.7
Indifference point function ln k2.78.213.52.0-3.7-2.8-2.7
Indifference point function log k2.78.213.52.0-3.7-2.8-2.7
Patch foraging total patch changes 0 sec0.10.30.5-0.40.20.70.7
Patch foraging total patch changes 12 sec0.50.61.4-0.21.20.70.8
Patch foraging total patch changes 18 sec0.20.50.8-0.10.90.80.7
Patch foraging total patch changes 24 sec0.10.20.40.50.70.20.3
Patch foraging total patch changes 6 sec1.01.62.5-0.81.21.41.6
Patch foraging time to switch 0 sec2.18.210.4-3.23.22.62.3
Patch foraging water rate 0 sec0.72.54.02.0-1.7-1.4-1.1
Patch foraging water rate 12 sec1.14.47.71.8-2.8-2.0-1.8
Patch foraging water rate 18 sec0.61.43.30.8-1.8-1.0-0.7
Patch foraging water rate 24 sec1.31.92.61.2-1.6-1.3-1.3
Patch foraging water rate 6 sec7.010.314.43.8-3.2-3.2-2.4
Seeking ratio, delayed vs. immediate footshock0.60.92.00.3-1.0-0.6-1.4
Distance traveled before self-admin1.84.06.61.8-2.6-1.8-1.7
Distance traveled after self-admin0.20.31.0-0.0-0.5-0.1-1.0
Extensor digitorum longus weight0.20.92.61.6-0.6-0.7-0.1
Bone: elastic displacement0.81.02.0-1.40.71.00.7
Bone: elastic work0.10.20.40.3-0.6-0.4-0.4
Bone: endosteal estimation3.17.59.03.0-2.5-2.7-2.7
Bone: endosteal perimeter1.84.34.92.2-2.0-2.0-2.1
Epididymis fat weight0.10.40.9-0.90.50.60.4
Delta time in closed arm before/after self-admin0.10.10.3-0.10.0-0.1-0.5
Delta time in open arm before/after self-admin0.70.91.41.1-1.2-0.8-0.1
Diff in mean of infusions in LGA sessions0.10.10.3-0.5-0.50.10.2
Delay discount exponential model param0.50.61.01.0-0.7-0.8-0.7
Extinction: sum of active levers before priming0.10.10.30.30.2-0.2-0.5
Active lever presses in extinction session 60.50.51.2-0.20.80.51.1
Bone: final force2.44.05.32.3-2.0-2.0-1.6
Bone: final moment3.35.47.12.7-2.3-2.3-2.0
Food consumed during 24 hour testing period0.30.61.5-0.2-1.2-0.7-0.7
Glucose1.52.44.9-2.21.01.51.1
Heart weight0.30.40.90.6-1.0-0.50.3
Delay discount hyperbolic model param0.50.71.01.0-0.6-0.8-0.8
Intermittent access intake day 1-15 change0.10.30.50.6-0.7-0.50.4
Intermittent access intake escalation0.10.50.90.8-1.0-0.60.4
Intermittent access intake escalation 20.10.10.30.1-0.5-0.30.1
Intermitt. access day 1 inactive lever presses0.00.61.00.7-1.0-0.40.9
Intermitt. access day 15 inactive lever presses0.21.11.91.4-1.1-1.1-0.2
Intermitt. access escalation Index0.30.91.4-1.00.51.01.2
Intermittent access day 1 total infusions0.10.30.50.7-0.6-0.40.2
Intermittent access day 15 total infusions0.20.51.60.2-0.7-0.11.2
Intermittent access terminal intake (last 3 days)0.20.30.60.3-0.7-0.30.8
Intermittent access total infusions0.50.50.90.8-0.9-0.60.5
Intermittent access day 1 locomotion0.20.41.10.4-1.0-0.6-0.1
Intermittent access day 15 total locomotion0.20.92.90.4-1.7-0.60.3
Intermittent access total locomotion1.41.73.81.1-1.9-1.3-0.3
Intermittent access standard deviation0.21.22.4-1.10.41.01.5
Left kidney weight2.620.735.66.0-4.7-4.4-2.3
Right kidney weight2.416.928.35.3-4.3-4.0-2.0
Cocaine induced anxiety0.41.01.20.8-1.1-1.1-1.0
Post-drug Anxiety0.30.30.50.5-0.1-0.7-0.7
Baseline Anxiety0.40.71.3-0.91.10.70.1
Tail length1.68.612.73.6-3.3-2.9-1.5
Length with tail2.310.014.33.8-3.5-3.1-1.9
Length without tail0.63.04.82.2-1.7-1.8-1.0
Times rat made contact with spout0.20.20.5-0.70.40.3-0.1
Lifetime Intake0.30.40.60.8-0.7-0.50.5
Liver weight, left1.32.35.52.3-1.4-1.3-0.1
Liver weight, right0.10.20.40.6-0.40.00.5
Locomotor activity0.30.40.8-0.00.80.60.9
Locomotor testing distance0.10.20.30.40.50.20.5
Locomotor testing rearing0.31.13.81.9-0.5-0.7-0.1
Locomotion in novel chamber0.60.91.9-1.40.90.80.1
Locomotion in novel chamber post-restriction0.30.81.5-1.20.90.80.1
Fecal boli incidents, locomotor time 10.10.20.30.3-0.6-0.4-0.4
Change in fecal boli incidents, locomotor task2.22.43.5-1.91.51.61.2
Time >=10cm from walls, locomotor time 10.40.50.5-0.70.70.60.7
Bouts of movement, locomotor time 10.60.71.30.3-1.1-0.7-1.1
Total resting periods, locomotor time 10.20.20.6-0.4-0.5-0.2-0.7
Rest time, locomotor task time 10.71.11.90.7-0.9-1.1-1.4
Distance moved, locomotor task time 10.30.91.5-0.51.01.01.2
Vertical activity count, locomotor time 10.21.41.9-1.11.01.41.3
Time >=10cm from walls, locomotor time 20.41.02.0-0.91.40.90.7
Bouts of movement, locomotor time 20.10.20.6-0.40.0-0.1-0.8
Total resting periods, locomotor time 20.10.31.1-0.4-0.1-0.3-1.1
Rest time, locomotor task time 20.30.51.6-0.0-0.4-0.4-1.3
Distance moved, locomotor task time 20.10.10.20.40.30.20.5
Vertical activity count, locomotor time 20.00.10.10.30.20.20.4
Light reinforcement 10.10.40.80.9-0.6-0.5-0.5
Light reinforcement 20.40.91.4-0.60.91.01.2
Bone: marrow area3.17.59.13.0-2.5-2.8-2.7
Bone: maximum diameter0.91.93.92.0-1.2-1.2-0.8
Bone: maximum force2.24.45.32.3-2.2-2.1-1.8
Bone: maximum moment3.05.66.72.6-2.4-2.4-2.1
Mean time between licks in bursts0.10.50.8-0.70.40.80.9
Mean num. licks in bursts0.10.30.7-0.60.2-0.1-0.8
Cd content in liver1.21.31.70.9-1.3-1.2-1.2
Co content in liver0.40.50.80.3-0.8-0.9-0.7
Cu content in liver1.51.83.21.8-1.2-1.3-0.7
Fe content in liver0.40.41.31.1-0.3-0.50.4
K content in liver0.30.31.01.0-0.3-0.3-0.0
Mg content in liver0.20.20.30.60.40.20.5
Mn content in liver0.10.20.40.20.30.30.6
Na content in liver0.81.01.5-0.51.21.01.0
Rb content in liver3.03.54.92.2-1.9-1.8-1.4
Se content in liver2.12.54.9-0.21.61.62.2
Sr content in liver4.94.35.7-2.42.02.21.6
Zn content in liver0.70.81.6-0.21.00.81.3
Bone: minimum diameter3.87.38.93.0-2.5-2.6-2.7
Time in familiar zone, hab. session 14.34.75.82.1-2.4-2.1-2.1
Time in novel zone, hab. session 12.32.63.8-1.21.91.51.7
Total zone transitions, hab. session 12.63.74.32.0-1.7-1.9-2.1
Total locomotion distance, hab. session 10.60.91.70.7-0.9-0.9-1.3
Locomotion velocity, hab. session 10.40.61.30.3-0.7-0.7-1.2
Time in familiar zone, hab. session 21.11.21.51.1-1.1-1.2-1.0
Time in novel zone, hab. session 20.80.81.2-0.81.10.90.8
Total zone transitions, hab. session 23.74.85.92.4-2.1-2.1-2.1
Total locomotion distance, hab. session 20.10.20.60.1-0.3-0.2-0.8
Locomotion velocity, hab. session 20.10.10.40.1-0.3-0.2-0.7
Novel to familiar place preference ratio0.00.10.10.4-0.3-0.1-0.0
Novelty place preference0.20.20.40.6-0.6-0.4-0.3
Time in novel zone, NPP test0.20.20.40.6-0.6-0.4-0.3
Total zone transitions, NPP test0.30.40.50.7-0.7-0.6-0.6
Total locomotion distance, NPP test0.00.00.00.1-0.2-0.0-0.1
Locomotion velocity, NPP test0.10.10.20.4-0.4-0.2-0.3
Intraocular pressure0.00.10.1-0.10.3-0.2-0.3
Delta distance traveled before/after self-admin1.92.12.6-1.61.51.51.1
Delta ambulatory time before/after self-admin1.11.92.6-1.61.31.41.2
Parametrial fat weight2.25.26.5-2.62.02.42.1
Pavlov. Cond. lever latency0.10.10.3-0.50.10.1-0.2
Pavlov. Cond. magazine entry latency0.81.01.6-0.61.31.01.0
Pavlov. Cond. change in total contacts0.10.10.1-0.30.30.30.3
Pavlov. Cond. index score0.20.30.5-0.00.60.50.7
Pavlov. Cond. latency score0.20.30.5-0.20.60.50.7
Pavlov. Cond. lever contacts0.10.10.20.4-0.0-0.00.2
Pavlov. Cond. magazine entry number0.20.30.60.0-0.8-0.5-0.4
Pavlov. Cond. intertrial magazine entries0.30.40.60.4-0.8-0.6-0.7
Pavlov. Cond. lever-magazine prob. diff.0.30.30.6-0.00.60.50.8
Pavlov. Cond. response bias0.20.20.40.40.60.20.5
Pavlov. Cond. lever latency0.20.30.50.5-0.6-0.7-0.3
Pavlov. Cond. magazine entry latency1.01.51.8-1.21.21.31.1
Pavlov. Cond. change in total contacts0.20.40.90.3-0.6-0.4-1.0
Pavlov. Cond. index score0.10.10.2-0.30.40.50.1
Pavlov. Cond. latency score0.40.71.0-0.90.81.00.6
Pavlov. Cond. lever contacts0.00.10.2-0.10.30.40.1
Pavlov. Cond. magazine entry number0.60.71.01.0-0.9-0.9-0.5
Pavlov. Cond. intertrial magazine entries2.76.06.62.6-2.5-2.5-2.2
Pavlov. Cond. lever-magazine prob. diff.0.10.20.3-0.30.40.60.2
Pavlov. Cond. response bias0.10.10.30.4-0.3-0.2-0.6
Time in closed arm before self-admin0.20.41.00.3-1.0-0.30.5
Time in closed arm after self-admin0.00.00.0-0.1-0.2-0.1-0.1
Time in open arm before self-admin0.60.71.6-0.81.30.7-0.3
Time in open arm after self-admin0.00.10.10.10.40.1-0.3
Bone: periosteal estimation2.66.28.12.8-2.2-2.4-2.4
Bone: periosteal perimeter2.55.06.32.5-1.8-2.2-2.3
Bone: post-yield work1.93.33.71.8-1.6-1.9-1.9
Progressive ratio test 1 active lever presses0.71.22.11.4-1.0-1.0-0.7
Progressive ratio test 1 breakpoint0.61.11.91.4-1.0-1.0-0.7
Progressive ratio test 1 inactive lever presses0.92.54.22.0-1.7-1.5-0.6
Progressive ratio test 2 active lever presses0.30.41.30.4-0.30.01.2
Progressive ratio test 2 breakpoint0.30.41.20.5-0.3-0.11.1
Progressive ratio test 2 inactive lever presses0.82.63.92.0-1.9-1.6-0.5
Incentive Sensitization - Responses0.20.51.20.4-0.7-0.21.1
Incentive Sensitization - Breakpoint0.20.41.50.2-0.5-0.01.2
Sum of active levers in priming session hrs 5-60.20.20.4-0.6-0.20.40.5
Progressive ratio0.00.10.30.1-0.0-0.2-0.5
Food seeking constrained by brief footshock1.92.44.90.6-1.8-1.1-2.2
Seeking ratio, punishment vs. effort0.51.12.10.6-1.4-0.9-1.1
Retroperitoneal fat weight4.821.524.5-5.04.44.84.4
Reaction time number correct0.00.10.20.50.30.20.2
Reaction time mean minus median0.00.10.2-0.50.10.1-0.1
Reaction time mean minus median AUC0.00.00.0-0.10.2-0.0-0.2
Reaction time num false alarms0.30.41.10.80.10.21.1
Reaction time num false alarms AUC0.20.40.90.50.40.41.0
Reaction time trials correct on left0.00.10.20.50.30.20.2
Reaction time trials on left0.00.10.20.50.20.30.2
Reaction time mean0.10.10.2-0.1-0.4-0.5-0.3
Reaction time mean AUC0.00.10.3-0.50.0-0.00.2
Median of all reaction times0.00.10.2-0.2-0.3-0.4-0.1
Reaction time omissions0.00.00.0-0.1-0.00.10.1
Reaction time false alarm rate0.10.20.60.10.20.20.8
Reaction time premature initiation rate0.30.41.4-1.20.30.40.1
Reaction time premature initiations0.20.51.1-1.00.50.60.3
Std. dev. reaction times0.00.10.1-0.3-0.4-0.2-0.0
Reaction time trials completed0.00.10.20.50.20.30.2
Reaction time trials AUC0.00.10.30.50.30.30.3
Run reversals in cocaine runway, females0.40.51.1-1.10.20.50.8
Run reversals in cocaine runway, males0.10.10.30.50.0-0.3-0.2
Latency to leave start box in cocaine runway0.10.20.4-0.2-0.7-0.30.2
Latency to leave start box in cocaine runway, F0.20.20.5-0.6-0.20.30.7
Latency to leave start box in cocaine runway, M1.00.91.31.0-0.9-1.1-0.8
Std. dev. time between licks in bursts0.10.20.60.7-0.5-0.20.0
Total sessions with >9 infusions1.41.83.41.8-1.1-1.3-0.8
Short access day 1 total inactive lever presses0.30.51.31.1-0.7-0.60.2
Short access day 10 total inactive lever presses0.00.10.3-0.2-0.5-0.2-0.1
Short access day 1 total infusions0.10.20.50.7-0.2-0.3-0.1
Short access day 10 total infusions0.10.20.50.60.10.10.7
Short access total infusions0.10.10.20.40.30.10.5
Short access day 1 locomotion0.30.51.31.1-0.3-0.7-0.1
Short access day 10 total locomotion0.31.01.70.7-1.3-1.1-0.9
Short access total locomotion0.50.70.90.9-1.0-0.8-0.7
One hour access (0.3 mA shock)1.41.73.51.2-1.9-1.3-0.1
Compulsive drug intake1.01.52.21.3-1.5-1.3-0.6
One hour access (shock baseline)0.10.41.3-0.20.10.21.1
Social response proportion0.20.30.40.4-0.7-0.40.6
Social responses2.12.74.02.0-1.8-1.8-0.8
Social time3.55.67.52.2-2.7-2.3-2.1
Soleus weight0.00.10.10.30.00.00.3
Bone: stiffness2.24.16.32.5-2.1-2.0-1.3
Tibialis anterior weight0.82.64.4-0.61.61.82.1
Time to tail flick, vehicle, before self-admin0.10.10.40.2-0.6-0.3-0.1
Time to tail flick, vehicle, after self-admin0.00.10.1-0.20.0-0.4-0.2
Time to tail flick, test, before self-admin0.60.71.60.3-1.0-0.6-1.2
Time to tail flick, test, after self-admin0.30.30.5-0.50.70.50.3
Delta time to tail flick, vehicle, before/after SA0.10.10.2-0.20.4-0.1-0.1
Delta time to tail flick, test, before/after SA0.30.40.7-0.20.80.40.9
Tibia length3.910.817.04.1-3.2-3.2-2.5
Ambulatory time before self-admin1.34.15.02.0-2.2-1.8-2.0
Ambulatory time after self-admin0.40.71.20.3-1.1-0.5-1.1
Bone: tissue strength0.10.10.4-0.1-0.6-0.2-0.2
Total heroin consumption0.00.00.1-0.2-0.00.20.3
Bone: trabecular number0.10.20.50.10.5-0.0-0.7
Bone: trabecular spacing0.00.00.0-0.0-0.10.00.1
Bone: trabecular thickness0.00.00.10.30.20.00.2
Bone: trabecular tissue density1.52.63.9-1.51.41.52.0
Water consumed over 24 hours0.61.21.60.6-1.3-1.1-1.3
Number of responses in last shaping day0.30.41.20.10.60.21.1