ENSRNOG00000070097

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression ENSRNOG00000070097 0.13 0.08 1.4e-13 0.08 0.08 0.08 0.08 6.1e-09 1.6e-09 1.4e-09 3.7e-09
2 BLA gene expression ENSRNOG00000070097 0.09 0.06 2.4e-04 0.04 0.06 0.05 0.05 3.6e-03 4.8e-04 1.1e-03 1.2e-03
3 Brain gene expression ENSRNOG00000070097 0.06 0.04 4.0e-06 0.05 0.06 0.06 0.05 4.0e-05 8.0e-06 4.3e-06 3.5e-05
4 NAcc gene expression ENSRNOG00000070097 0.04 0.03 8.4e-03 0 0.01 -0 0 2.8e-01 4.1e-02 7.2e-01 2.1e-01

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
BMI with tail0.31.01.11.01.01.01.0
BMI without tail0.00.10.1-0.3-0.3-0.3-0.3
Body weight2.510.711.0-3.3-3.2-3.2-3.3
Epididymis fat weight0.00.00.1-0.2-0.2-0.1-0.2
Glucose0.00.10.20.20.4-0.10.1
Heart weight0.00.00.1-0.2-0.30.2-0.0
Left kidney weight3.29.110.5-3.1-2.7-3.2-3.1
Right kidney weight5.716.217.6-4.1-3.7-4.2-4.0
Tail length5.215.716.3-4.0-3.9-3.9-4.0
Length with tail7.929.030.1-5.4-5.5-5.2-5.4
Length without tail4.59.710.7-3.1-3.3-3.0-3.1
Liver weight, left0.20.20.60.50.80.10.4
Liver weight, right0.00.00.10.20.3-0.20.0
Parametrial fat weight0.30.61.5-0.40.1-1.2-0.8
Retroperitoneal fat weight0.82.64.41.72.11.01.4
Intraocular pressure0.10.10.20.20.10.40.3
Extensor digitorum longus weight0.00.20.50.40.7-0.00.3
Soleus weight0.10.20.40.60.50.20.3
Tibialis anterior weight0.00.20.4-0.20.2-0.6-0.3
Tibia length2.56.97.7-2.8-2.7-2.5-2.6
Number of licking bursts4.85.76.22.32.32.52.4
Food consumed during 24 hour testing period0.30.40.8-0.6-0.9-0.3-0.5
Times rat made contact with spout0.20.30.70.40.80.10.4
Mean time between licks in bursts0.00.00.10.1-0.00.30.2
Mean num. licks in bursts2.63.14.1-1.7-1.4-2.0-1.8
Std. dev. time between licks in bursts0.10.10.3-0.1-0.60.50.1
Water consumed over 24 hours0.30.40.4-0.6-0.6-0.6-0.6
Indifference point 0 sec0.00.00.1-0.0-0.4-0.1-0.2
Indifference point AUC0.30.30.40.60.70.30.5
Indifference point function ln k0.40.60.7-0.8-0.8-0.6-0.8
Indifference point function log k0.40.60.7-0.8-0.8-0.6-0.8
Delay discounting total patch changes 0 sec0.10.10.3-0.2-0.5-0.2-0.4
Delay discounting total patch changes 12 sec0.00.00.1-0.1-0.2-0.2-0.2
Delay discounting total patch changes 18 sec0.10.20.20.50.30.50.4
Delay discounting total patch changes 24 sec0.30.30.6-0.6-0.8-0.4-0.5
Delay discounting total patch changes 6 sec0.00.00.00.1-0.1-0.1-0.1
Delay discounting time to switch 0 sec0.20.20.40.50.60.30.5
Delay discounting water rate 0 sec0.91.51.81.31.11.21.2
Delay discounting water rate 12 sec0.10.20.4-0.6-0.5-0.2-0.4
Delay discounting water rate 18 sec0.20.30.30.50.50.50.5
Delay discounting water rate 24 sec0.50.71.60.60.31.30.8
Delay discounting water rate 6 sec0.30.40.8-0.7-0.9-0.2-0.5
Locomotor activity0.10.10.20.30.5-0.30.0
Locomotor testing distance0.10.10.30.30.6-0.10.2
Locomotor testing rearing1.62.53.51.51.91.31.5
Light reinforcement 10.20.40.50.70.50.70.7
Light reinforcement 22.43.23.51.91.81.61.8
Reaction time number correct0.00.00.10.20.30.00.2
Reaction time mean minus median0.40.50.6-0.6-0.7-0.7-0.8
Reaction time mean minus median AUC0.81.01.2-0.9-0.9-1.1-1.1
Reaction time num false alarms1.11.51.61.21.31.21.2
Reaction time num false alarms AUC1.21.61.71.31.31.21.3
Reaction time trials correct on left0.00.00.10.20.30.00.2
Reaction time trials on left0.00.00.10.20.3-0.00.2
Reaction time mean0.10.10.1-0.3-0.2-0.2-0.3
Reaction time mean AUC0.00.00.1-0.2-0.1-0.2-0.2
Median of all reaction times0.00.00.0-0.00.00.1-0.0
Reaction time omissions0.00.00.00.10.2-0.2-0.1
Reaction time false alarm rate0.71.01.01.01.01.01.0
Reaction time premature initiation rate0.00.10.10.1-0.20.40.2
Reaction time premature initiations0.10.10.10.2-0.00.40.3
Std. dev. reaction times0.30.40.5-0.6-0.7-0.6-0.7
Reaction time trials completed0.00.00.10.20.3-0.00.2
Reaction time trials AUC0.00.00.10.20.3-0.10.1
Social response proportion1.92.13.1-1.3-1.7-1.2-1.4
Social responses0.60.81.4-0.6-1.2-0.8-0.9
Social time1.82.33.4-1.5-1.8-1.2-1.5
Conditioned locomotion0.70.81.00.90.81.00.9
Cocaine response after cond. corrected0.10.10.3-0.20.1-0.5-0.3
Cocaine response after cond. not corrected0.40.40.9-0.5-0.2-1.0-0.7
Cocaine response before conditioning1.51.81.9-1.2-1.3-1.4-1.4
Saline control response0.10.10.2-0.3-0.2-0.4-0.3
Condit. Reinf. active minus inactive responses1.72.02.4-1.5-1.6-1.3-1.4
Condit. Reinf. active-inactive response ratio0.00.00.00.00.20.10.1
Condit. Reinf. active responses3.34.55.6-2.1-2.4-1.9-2.1
Condit. Reinf. inactive responses3.13.85.7-1.9-2.4-1.6-1.9
Condit. Reinf. lever presses7.810.711.6-3.3-3.4-3.1-3.3
Condit. Reinf. lever reinforcers received3.04.35.6-2.1-2.4-1.8-2.0
Pavlov. Cond. lever latency4.35.96.82.52.62.22.4
Pavlov. Cond. magazine entry latency2.73.13.8-1.8-1.9-1.5-1.7
Pavlov. Cond. change in total contacts6.48.910.9-3.2-3.3-2.5-2.8
Pavlov. Cond. index score4.45.76.7-2.5-2.6-2.1-2.3
Pavlov. Cond. latency score4.15.26.2-2.4-2.5-2.0-2.2
Pavlov. Cond. lever contacts3.65.05.8-2.4-2.4-2.0-2.1
Pavlov. Cond. magazine entry number3.54.35.02.22.21.92.0
Pavlov. Cond. intertrial magazine entries1.01.31.71.31.20.91.0
Pavlov. Cond. lever-magazine prob. diff.4.55.86.6-2.5-2.6-2.2-2.4
Pavlov. Cond. response bias3.95.46.4-2.5-2.5-2.0-2.2
Conditioned reinforcement - actives0.10.10.20.40.40.40.4
Conditioned reinforcement - inactives0.20.20.40.1-0.50.60.2
Conditioned locomotion3.13.74.21.91.72.12.0
Intermittent access intake day 1-15 change1.71.71.9-1.4-1.3-1.3-1.3
Intermittent access intake escalation1.51.41.7-1.3-1.3-1.1-1.2
Intermittent access intake escalation 21.71.71.8-1.3-1.3-1.3-1.3
Intermitt. access day 1 inactive lever presses3.13.34.5-1.7-2.1-1.6-1.8
Intermitt. access day 15 inactive lever presses0.10.10.4-0.2-0.60.1-0.2
Intermitt. access escalation Index0.30.30.50.50.40.70.6
Intermittent access day 1 total infusions3.94.45.72.01.82.42.2
Intermittent access day 15 total infusions0.60.71.50.60.41.20.9
Intermittent access terminal intake (last 3 days)1.11.22.10.90.71.51.2
Intermittent access total infusions1.61.72.81.10.91.71.4
Intermittent access day 1 locomotion2.52.63.91.51.12.01.7
Intermittent access day 15 total locomotion0.70.71.40.70.41.20.9
Intermittent access total locomotion2.22.53.41.51.21.81.6
Intermittent access standard deviation3.53.85.2-2.0-2.3-1.5-1.9
Cocaine induced anxiety0.70.80.8-0.9-0.9-0.9-0.9
Post-drug Anxiety0.00.00.00.1-0.0-0.1-0.1
Baseline Anxiety1.71.82.01.41.21.41.3
Lifetime Intake1.41.52.21.11.01.51.3
Incentive Sensitization - Responses0.10.10.30.20.30.50.4
Incentive Sensitization - Breakpoint0.10.10.20.20.30.50.4
Progressive ratio test 1 active lever presses0.10.10.2-0.2-0.40.3-0.0
Progressive ratio test 1 breakpoint0.30.30.6-0.5-0.8-0.1-0.4
Progressive ratio test 1 inactive lever presses0.10.10.30.0-0.50.50.1
Progressive ratio test 2 active lever presses0.20.20.50.20.10.70.4
Progressive ratio test 2 breakpoint0.10.20.40.20.10.60.4
Progressive ratio test 2 inactive lever presses0.30.30.6-0.1-0.80.70.1
Total sessions with >9 infusions1.21.31.61.21.31.11.1
Short access day 1 total inactive lever presses0.30.41.00.4-0.21.00.6
Short access day 10 total inactive lever presses1.11.22.0-1.1-1.4-0.7-1.0
Short access day 1 total infusions0.20.20.30.40.50.50.5
Short access day 10 total infusions0.60.60.70.70.80.90.8
Short access total infusions1.01.11.31.01.11.01.0
Short access day 1 locomotion0.60.70.80.90.80.80.8
Short access day 10 total locomotion0.20.20.6-0.4-0.8-0.1-0.3
Short access total locomotion1.11.21.31.21.01.11.1
Compulsive drug intake0.00.00.0-0.1-0.2-0.2-0.2
One hour access (0.3 mA shock)0.20.30.7-0.5-0.90.0-0.4
One hour access (shock baseline)0.10.20.40.20.00.60.4
Number of responses in last shaping day0.30.30.60.40.20.80.7
Context. condit. distance diff. score0.20.20.40.30.20.60.5
Locomotion velocity, session 10.20.20.40.40.70.10.3
Locomotion distance, session 10.20.30.5-0.6-0.7-0.4-0.5
Locomotion velocity, session 20.30.30.40.70.60.50.6
Locomotion distance, session 21.82.62.91.61.41.71.6
Locomotion velocity, session 30.30.30.40.60.60.50.6
Locomotion distance, session 31.21.32.6-1.1-1.6-0.6-1.0
Stereotopy head waving bouts, day 30.10.20.40.50.6-0.10.2
Stereotopy head waving duration, day 30.50.61.20.91.10.40.6
Locomotion velocity, session 70.10.10.2-0.2-0.5-0.0-0.2
Locomotion distance, session 70.10.10.1-0.3-0.3-0.3-0.3
Stereotopy head waving bouts, day 71.51.72.11.21.21.51.4
Stereotopy head waving duration, day 72.53.03.11.71.81.71.8
Locomotion velocity, session 84.95.96.42.52.32.52.4
Locomotion distance, session 81.52.33.11.51.21.81.6
Degree of sensitization distance0.10.10.40.30.6-0.10.2
Degree of sensitization stereotypy2.22.53.01.51.41.71.6
Condit. Reinf. active minus inactive responses0.20.20.30.40.50.60.5
Condit. Reinf. active-inactive response ratio0.00.00.10.10.30.00.1
Condit. Reinf. active responses2.43.03.31.71.61.81.7
Condit. Reinf. inactive responses3.23.84.31.91.72.12.0
Incentive salience index mean0.20.30.50.50.40.70.5
Condit. Reinf. lever presses0.00.10.20.1-0.10.40.2
Time in familiar zone, hab. session 11.00.91.5-0.9-0.6-1.2-1.0
Time in novel zone, hab. session 12.32.33.11.41.21.81.6
Total zone transitions, hab. session 10.10.10.20.20.10.40.3
Total locomotion distance, hab. session 11.01.41.8-1.2-1.4-1.0-1.1
Locomotion velocity, hab. session 10.71.11.3-1.0-1.1-0.9-1.0
Time in familiar zone, hab. session 22.93.03.2-1.6-1.7-1.8-1.8
Time in novel zone, hab. session 21.51.61.81.21.31.21.2
Total zone transitions, hab. session 23.44.44.62.12.12.12.1
Total locomotion distance, hab. session 20.30.40.70.50.40.80.7
Locomotion velocity, hab. session 20.30.40.60.60.50.80.7
Novel to familiar place preference ratio0.00.00.1-0.1-0.20.0-0.1
Novelty place preference0.00.00.0-0.0-0.10.20.0
Time in novel zone, NPP test0.10.10.10.20.10.40.3
Total zone transitions, NPP test0.00.10.10.30.30.20.2
Total locomotion distance, NPP test2.63.53.7-1.8-1.9-1.8-1.9
Locomotion velocity, NPP test2.84.04.2-1.9-2.0-2.0-2.0
Pavlov. Cond. lever latency0.20.30.4-0.6-0.4-0.6-0.5
Pavlov. Cond. magazine entry latency0.30.40.50.60.70.50.6
Pavlov. Cond. change in total contacts0.70.81.10.80.61.10.9
Pavlov. Cond. index score0.50.60.70.80.80.70.8
Pavlov. Cond. latency score0.30.40.40.70.50.60.6
Pavlov. Cond. lever contacts0.00.00.00.1-0.20.1-0.0
Pavlov. Cond. magazine entry number0.50.60.7-0.8-0.8-0.7-0.8
Pavlov. Cond. intertrial magazine entries0.60.80.90.81.00.80.9
Pavlov. Cond. lever-magazine prob. diff.0.70.80.91.00.90.90.9
Pavlov. Cond. response bias0.00.10.10.30.30.10.2
Bone: apparent density0.91.52.1-1.1-1.0-1.5-1.3
Bone surface1.42.42.7-1.5-1.6-1.5-1.5
Bone volume1.52.52.7-1.5-1.5-1.6-1.6
Bone: connectivity density0.30.50.7-0.5-0.7-0.8-0.7
Bone: cortical apparent density2.33.03.11.81.71.71.7
Bone: cortical area1.42.12.3-1.4-1.5-1.5-1.5
Bone: cortical porosity2.72.93.61.81.41.91.7
Bone: cortical porosity3.53.84.72.01.62.21.9
Bone: cortical thickness0.40.70.9-0.7-0.7-1.0-0.9
Bone: cortical thickness0.40.50.80.70.90.50.6
Bone: cortical tissue density2.73.53.61.91.91.81.9
Bone: elastic displacement0.00.10.1-0.1-0.1-0.3-0.3
Bone: elastic work2.02.62.7-1.6-1.6-1.6-1.6
Bone: endosteal estimation1.53.33.8-1.8-1.9-1.7-1.8
Bone: endosteal perimeter1.22.53.2-1.6-1.8-1.3-1.5
Bone: final force1.42.22.6-1.4-1.6-1.4-1.5
Bone: final moment1.93.13.5-1.7-1.9-1.7-1.8
Bone: marrow area1.63.54.0-1.9-2.0-1.8-1.9
Bone: maximum diameter1.32.32.6-1.5-1.6-1.4-1.6
Bone: maximum force2.23.84.4-2.0-2.1-1.8-1.9
Bone: maximum moment2.74.75.3-2.2-2.3-2.0-2.2
Bone: minimum diameter2.34.35.8-2.1-2.4-1.7-2.0
Bone: periosteal estimation2.04.24.5-2.0-2.1-2.0-2.1
Bone: periosteal perimeter1.62.62.8-1.6-1.7-1.6-1.7
Bone: post-yield work0.91.22.0-1.1-1.4-0.7-1.0
Bone: stiffness1.11.72.1-1.4-1.4-1.2-1.3
Bone: tissue strength1.91.82.7-1.4-1.7-1.0-1.3
Bone: trabecular number1.32.02.1-1.4-1.4-1.4-1.4
Bone: trabecular spacing0.40.50.5-0.7-0.6-0.7-0.7
Bone: trabecular thickness0.10.10.20.20.40.20.3
Bone: trabecular tissue density0.91.22.61.11.60.50.9
Breakpoint value in progressive ratio session1.11.22.3-1.1-1.5-0.6-1.0
Distance traveled before self-admin0.10.10.2-0.4-0.3-0.4-0.3
Distance traveled after self-admin3.74.04.9-2.0-2.2-1.8-2.0
Delta time in closed arm before/after self-admin2.92.82.8-1.7-1.7-1.7-1.7
Delta time in open arm before/after self-admin0.70.71.00.81.00.60.8
Diff in mean of infusions in LGA sessions0.50.50.90.70.41.00.7
Extinction: sum of active levers before priming4.34.44.6-2.2-2.0-2.1-2.1
Active lever presses in extinction session 65.65.46.6-2.2-2.1-2.6-2.4
Delta distance traveled before/after self-admin3.43.64.6-1.9-2.1-1.7-1.9
Delta ambulatory time before/after self-admin3.53.84.9-1.9-2.2-1.7-1.9
Time in closed arm before self-admin3.33.84.21.91.92.02.0
Time in closed arm after self-admin0.00.00.1-0.2-0.30.0-0.1
Time in open arm before self-admin5.96.26.8-2.3-2.5-2.5-2.6
Time in open arm after self-admin1.11.21.4-1.1-1.0-1.2-1.1
Sum of active levers in priming session hrs 5-60.20.20.2-0.4-0.5-0.4-0.4
Time to tail flick, vehicle, before self-admin1.01.01.11.01.01.01.0
Time to tail flick, vehicle, after self-admin0.10.10.1-0.1-0.3-0.2-0.3
Time to tail flick, test, before self-admin1.61.62.21.11.01.51.3
Time to tail flick, test, after self-admin0.10.10.20.40.20.30.3
Delta time to tail flick, vehicle, before/after SA0.60.60.8-0.7-0.9-0.7-0.8
Delta time to tail flick, test, before/after SA0.10.10.3-0.0-0.0-0.6-0.3
Ambulatory time before self-admin0.00.00.0-0.2-0.2-0.2-0.2
Ambulatory time after self-admin6.06.68.6-2.6-2.9-2.2-2.5
Total heroin consumption0.20.30.6-0.5-0.8-0.2-0.4
Area under the delay curve0.10.10.3-0.2-0.60.1-0.2
Delay disc. indifference point, 0s delay0.20.20.60.1-0.10.70.5
Delay disc. indifference point, 16s delay0.40.41.1-0.6-1.0-0.1-0.5
Delay disc. indifference point, 2s delay0.30.30.7-0.6-0.8-0.2-0.5
Delay disc. indifference point, 24s delay1.41.42.3-1.2-1.5-0.8-1.1
Delay disc. indifference point, 4s delay0.20.20.40.40.20.70.5
Delay disc. indifference point, 8s delay0.10.10.2-0.3-0.4-0.2-0.3
Delay discount exponential model param0.20.20.40.30.70.00.3
Delay discount hyperbolic model param0.10.10.30.20.5-0.10.2
Fecal boli incidents, locomotor time 11.21.31.71.31.11.01.0
Change in fecal boli incidents, locomotor task0.40.40.6-0.5-0.4-0.8-0.7
Time >=10cm from walls, locomotor time 10.00.00.00.10.20.10.1
Bouts of movement, locomotor time 10.20.20.5-0.4-0.7-0.0-0.3
Total resting periods, locomotor time 10.20.20.6-0.4-0.7-0.1-0.3
Rest time, locomotor task time 10.60.60.80.90.70.80.8
Distance moved, locomotor task time 10.00.00.0-0.00.10.00.1
Vertical activity count, locomotor time 11.11.21.4-1.2-1.2-1.0-1.0
Time >=10cm from walls, locomotor time 21.71.81.91.41.31.41.3
Bouts of movement, locomotor time 20.00.00.0-0.00.10.10.1
Total resting periods, locomotor time 20.00.00.00.10.10.20.2
Rest time, locomotor task time 20.20.30.30.60.50.50.5
Distance moved, locomotor task time 20.30.40.40.50.60.60.6
Vertical activity count, locomotor time 20.30.30.4-0.6-0.7-0.5-0.5
Weight adjusted by age0.00.00.0-0.10.1-0.1-0.0
Seeking ratio, delayed vs. immediate footshock0.40.50.9-0.8-0.9-0.2-0.6
Locomotion in novel chamber0.00.00.10.30.10.00.0
Locomotion in novel chamber post-restriction0.20.20.3-0.4-0.5-0.4-0.4
Progressive ratio0.00.00.0-0.1-0.2-0.1-0.1
Food seeking constrained by brief footshock3.34.04.8-2.0-2.2-1.8-2.0
Seeking ratio, punishment vs. effort0.30.40.6-0.6-0.8-0.5-0.6
Run reversals in cocaine runway, females0.10.10.2-0.3-0.4-0.2-0.3
Run reversals in cocaine runway, males0.30.30.8-0.30.1-0.9-0.6
Latency to leave start box in cocaine runway0.00.00.1-0.00.00.30.3
Latency to leave start box in cocaine runway, F0.20.30.40.40.30.70.6
Latency to leave start box in cocaine runway, M0.00.00.1-0.3-0.0-0.2-0.1
Cd content in liver0.10.10.1-0.3-0.1-0.4-0.3
Co content in liver0.30.30.40.60.60.50.6
Cu content in liver0.30.30.4-0.6-0.6-0.5-0.5
Fe content in liver0.00.00.10.20.10.30.2
K content in liver0.00.00.0-0.0-0.20.1-0.0
Mg content in liver0.40.40.50.70.60.60.6
Mn content in liver0.40.50.70.80.80.40.6
Na content in liver0.91.01.4-1.2-1.2-0.6-0.9
Rb content in liver0.30.40.70.60.30.80.6
Se content in liver6.57.99.22.93.02.52.7
Sr content in liver0.40.40.60.60.70.40.6
Zn content in liver0.10.10.20.40.30.40.4