ENSRNOG00000064195

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression ENSRNOG00000064195 0.04 0.03 3.9e-03 0 0.02 0 0 1.7e-01 4.1e-03 1.4e-01 7.6e-02
2 Liver gene expression ENSRNOG00000064195 0.21 0.09 0.0e+00 0.12 0.16 0.16 0.15 2.3e-13 1.5e-17 7.8e-17 3.8e-16
3 NAcc gene expression ENSRNOG00000064195 0.04 0.03 4.2e-03 0 0.01 0.01 -0 3.1e-01 2.8e-02 4.7e-02 4.4e-01

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
BMI with tail1.23.810.11.10.33.2
BMI without tail0.81.72.5-0.8-1.41.6
Body weight0.41.83.7-0.5-1.21.9
Epididymis fat weight0.10.20.50.20.10.7
Glucose0.91.41.81.01.3-1.2
Heart weight0.20.30.40.60.60.2
Left kidney weight4.813.738.2-0.0-1.76.2
Right kidney weight4.914.040.00.4-1.36.3
Tail length0.41.31.6-1.3-1.1-0.9
Length with tail0.20.91.3-1.1-1.2-0.3
Length without tail0.30.60.80.90.70.8
Liver weight, left1.11.72.21.51.31.2
Liver weight, right0.00.10.1-0.2-0.40.1
Parametrial fat weight0.10.10.20.30.4-0.2
Retroperitoneal fat weight0.41.44.00.2-0.52.0
Intraocular pressure0.10.20.3-0.5-0.5-0.2
Extensor digitorum longus weight0.31.11.6-1.0-1.30.7
Soleus weight0.72.12.51.61.41.4
Tibialis anterior weight0.00.00.00.00.10.2
Tibia length0.00.10.2-0.1-0.10.5
Number of licking bursts0.91.11.8-1.0-0.7-1.4
Food consumed during 24 hour testing period0.91.13.00.70.11.7
Times rat made contact with spout0.70.81.00.90.71.0
Mean time between licks in bursts1.11.64.3-0.6-0.2-2.1
Mean num. licks in bursts2.73.34.91.81.32.2
Std. dev. time between licks in bursts0.00.00.10.10.2-0.1
Water consumed over 24 hours0.60.82.10.1-0.41.5
Indifference point 0 sec0.10.20.4-0.5-0.2-0.7
Indifference point AUC0.40.40.70.80.80.1
Indifference point function ln k1.11.62.6-1.4-1.60.5
Indifference point function log k1.11.62.6-1.4-1.60.5
Delay discounting total patch changes 0 sec0.30.50.8-0.6-0.3-0.9
Delay discounting total patch changes 12 sec0.50.71.01.00.90.6
Delay discounting total patch changes 18 sec0.40.51.20.10.4-1.1
Delay discounting total patch changes 24 sec0.60.71.0-1.0-1.0-0.4
Delay discounting total patch changes 6 sec0.20.30.50.40.7-0.5
Delay discounting time to switch 0 sec0.00.00.10.1-0.10.3
Delay discounting water rate 0 sec0.30.50.7-0.8-0.80.2
Delay discounting water rate 12 sec2.43.65.7-2.4-2.2-0.7
Delay discounting water rate 18 sec0.20.30.4-0.6-0.5-0.4
Delay discounting water rate 24 sec0.40.50.6-0.7-0.70.7
Delay discounting water rate 6 sec0.40.70.8-0.8-0.7-0.9
Locomotor activity0.50.81.0-0.5-1.01.0
Locomotor testing distance0.00.00.1-0.1-0.2-0.2
Locomotor testing rearing0.20.30.7-0.6-0.80.0
Light reinforcement 11.93.55.8-2.2-2.4-0.0
Light reinforcement 21.52.03.3-1.5-1.80.7
Reaction time number correct0.50.70.9-0.8-0.7-1.0
Reaction time mean minus median0.00.10.1-0.3-0.2-0.2
Reaction time mean minus median AUC0.20.30.4-0.3-0.50.6
Reaction time num false alarms0.91.22.0-0.9-0.9-1.4
Reaction time num false alarms AUC0.71.01.6-0.9-0.8-1.3
Reaction time trials correct on left0.50.70.9-0.8-0.7-1.0
Reaction time trials on left0.50.71.0-0.8-0.7-1.0
Reaction time mean0.40.61.00.71.0-0.4
Reaction time mean AUC0.40.61.00.81.0-0.3
Median of all reaction times1.01.32.31.21.5-0.5
Reaction time omissions0.40.60.80.60.9-0.7
Reaction time false alarm rate0.10.20.4-0.3-0.3-0.7
Reaction time premature initiation rate2.23.03.91.71.42.0
Reaction time premature initiations0.91.31.71.20.91.3
Std. dev. reaction times0.00.00.10.20.3-0.1
Reaction time trials completed0.50.71.0-0.8-0.7-1.0
Reaction time trials AUC0.40.60.6-0.8-0.7-0.8
Social response proportion0.20.20.3-0.3-0.50.4
Social responses0.50.71.3-0.9-1.10.2
Social time1.11.52.00.91.3-1.4
Conditioned locomotion0.10.10.3-0.1-0.1-0.6
Cocaine response after cond. corrected0.80.91.2-1.1-0.9-0.9
Cocaine response after cond. not corrected2.32.53.4-1.8-1.6-1.3
Cocaine response before conditioning0.30.30.5-0.5-0.4-0.7
Saline control response1.01.31.5-1.2-1.1-1.1
Condit. Reinf. active minus inactive responses0.20.30.40.60.50.5
Condit. Reinf. active-inactive response ratio0.00.00.0-0.00.0-0.0
Condit. Reinf. active responses0.81.12.30.80.41.5
Condit. Reinf. inactive responses1.31.63.61.00.51.9
Condit. Reinf. lever presses0.30.41.20.2-0.11.1
Condit. Reinf. lever reinforcers received0.60.81.50.90.51.2
Pavlov. Cond. lever latency0.10.10.40.00.2-0.6
Pavlov. Cond. magazine entry latency0.40.50.90.71.0-0.0
Pavlov. Cond. change in total contacts0.70.91.21.00.81.1
Pavlov. Cond. index score0.20.20.30.50.50.4
Pavlov. Cond. latency score0.20.20.30.50.50.4
Pavlov. Cond. lever contacts0.20.30.80.40.20.9
Pavlov. Cond. magazine entry number0.20.30.3-0.6-0.5-0.4
Pavlov. Cond. intertrial magazine entries1.21.51.81.41.11.3
Pavlov. Cond. lever-magazine prob. diff.0.10.10.10.40.30.3
Pavlov. Cond. response bias0.30.40.50.70.60.7
Conditioned reinforcement - actives0.30.30.60.30.5-0.8
Conditioned reinforcement - inactives0.00.00.0-0.0-0.10.0
Conditioned locomotion1.21.52.4-1.4-1.50.3
Intermittent access intake day 1-15 change0.20.20.6-0.3-0.1-0.8
Intermittent access intake escalation0.40.40.6-0.6-0.4-0.8
Intermittent access intake escalation 20.20.20.40.20.4-0.7
Intermitt. access day 1 inactive lever presses0.70.71.90.50.11.4
Intermitt. access day 15 inactive lever presses2.02.22.91.51.21.7
Intermitt. access escalation Index0.00.00.00.00.20.0
Intermittent access day 1 total infusions0.20.20.3-0.2-0.40.5
Intermittent access day 15 total infusions0.30.30.6-0.7-0.8-0.1
Intermittent access terminal intake (last 3 days)0.10.10.2-0.3-0.50.3
Intermittent access total infusions0.20.20.4-0.4-0.70.3
Intermittent access day 1 locomotion0.40.40.6-0.7-0.8-0.2
Intermittent access day 15 total locomotion1.92.03.4-1.6-1.8-0.0
Intermittent access total locomotion0.70.81.3-0.8-1.10.7
Intermittent access standard deviation0.40.40.80.50.30.9
Cocaine induced anxiety2.42.87.01.00.52.6
Post-drug Anxiety2.12.34.61.30.92.1
Baseline Anxiety1.21.33.7-0.10.5-1.9
Lifetime Intake0.40.40.7-0.5-0.80.5
Incentive Sensitization - Responses2.32.33.61.41.11.9
Incentive Sensitization - Breakpoint2.52.54.31.41.12.1
Progressive ratio test 1 active lever presses0.10.10.10.30.3-0.1
Progressive ratio test 1 breakpoint0.10.10.10.40.4-0.2
Progressive ratio test 1 inactive lever presses0.20.20.20.50.30.5
Progressive ratio test 2 active lever presses1.21.21.41.21.01.1
Progressive ratio test 2 breakpoint1.21.31.51.21.01.2
Progressive ratio test 2 inactive lever presses0.70.81.10.90.71.1
Total sessions with >9 infusions1.41.52.6-1.4-1.6-0.3
Short access day 1 total inactive lever presses0.80.91.2-0.6-1.01.1
Short access day 10 total inactive lever presses0.70.81.9-0.2-0.61.4
Short access day 1 total infusions0.40.40.8-0.5-0.90.4
Short access day 10 total infusions0.10.10.1-0.2-0.4-0.2
Short access total infusions0.40.40.7-0.4-0.80.7
Short access day 1 locomotion0.10.10.1-0.3-0.4-0.3
Short access day 10 total locomotion0.30.40.8-0.3-0.3-0.9
Short access total locomotion0.30.40.6-0.6-0.8-0.3
Compulsive drug intake0.10.10.10.30.20.3
One hour access (0.3 mA shock)0.40.40.8-0.7-0.9-0.1
One hour access (shock baseline)0.80.91.2-1.1-1.1-0.6
Number of responses in last shaping day0.50.50.60.70.8-0.7
Context. condit. distance diff. score0.91.13.0-0.0-0.61.7
Locomotion velocity, session 10.40.41.1-0.2-0.41.1
Locomotion distance, session 10.10.10.2-0.10.0-0.5
Locomotion velocity, session 21.72.02.4-1.1-1.51.6
Locomotion distance, session 20.20.30.50.70.70.2
Locomotion velocity, session 31.72.03.5-1.4-1.90.8
Locomotion distance, session 31.81.92.6-1.6-1.6-0.8
Stereotopy head waving bouts, day 31.01.23.40.50.01.8
Stereotopy head waving duration, day 31.31.54.2-0.0-0.72.0
Locomotion velocity, session 70.70.81.4-0.7-1.20.6
Locomotion distance, session 70.00.00.0-0.1-0.1-0.1
Stereotopy head waving bouts, day 72.83.14.7-1.6-2.21.4
Stereotopy head waving duration, day 71.51.82.9-1.4-1.70.8
Locomotion velocity, session 83.03.69.2-0.4-1.33.0
Locomotion distance, session 80.60.91.9-0.4-0.81.4
Degree of sensitization distance2.72.83.41.81.61.6
Degree of sensitization stereotypy1.81.93.1-1.4-1.80.7
Condit. Reinf. active minus inactive responses0.70.81.20.81.1-0.8
Condit. Reinf. active-inactive response ratio0.80.91.30.91.2-0.7
Condit. Reinf. active responses0.50.71.40.30.7-1.2
Condit. Reinf. inactive responses0.20.20.5-0.4-0.2-0.7
Incentive salience index mean0.40.51.10.30.6-1.0
Condit. Reinf. lever presses0.30.40.7-0.5-0.4-0.9
Time in familiar zone, hab. session 10.40.40.6-0.6-0.80.6
Time in novel zone, hab. session 10.10.10.4-0.00.1-0.6
Total zone transitions, hab. session 10.50.81.50.40.8-1.2
Total locomotion distance, hab. session 10.30.50.7-0.8-0.9-0.1
Locomotion velocity, hab. session 10.30.40.7-0.8-0.90.0
Time in familiar zone, hab. session 20.40.40.6-0.8-0.6-0.5
Time in novel zone, hab. session 20.20.20.30.50.5-0.0
Total zone transitions, hab. session 20.30.30.70.40.30.9
Total locomotion distance, hab. session 20.20.30.4-0.6-0.70.4
Locomotion velocity, hab. session 20.10.20.2-0.3-0.50.4
Novel to familiar place preference ratio0.00.00.1-0.2-0.20.2
Novelty place preference0.20.20.4-0.5-0.60.2
Time in novel zone, NPP test0.30.30.5-0.6-0.70.2
Total zone transitions, NPP test0.10.10.10.20.4-0.2
Total locomotion distance, NPP test0.60.81.3-1.1-1.10.1
Locomotion velocity, NPP test0.50.61.0-1.0-1.0-0.1
Pavlov. Cond. lever latency0.60.71.90.50.31.4
Pavlov. Cond. magazine entry latency1.11.42.50.71.1-1.6
Pavlov. Cond. change in total contacts1.01.02.00.60.9-1.4
Pavlov. Cond. index score0.60.81.80.40.7-1.3
Pavlov. Cond. latency score0.40.51.6-0.00.2-1.3
Pavlov. Cond. lever contacts0.91.02.5-0.6-0.4-1.6
Pavlov. Cond. magazine entry number1.11.32.2-0.7-1.11.5
Pavlov. Cond. intertrial magazine entries0.10.20.4-0.10.3-0.6
Pavlov. Cond. lever-magazine prob. diff.0.81.02.50.30.6-1.6
Pavlov. Cond. response bias1.11.33.40.30.7-1.8
Bone: apparent density0.30.51.2-0.00.4-1.1
Bone surface0.10.20.30.20.4-0.5
Bone volume0.10.20.5-0.00.2-0.7
Bone: connectivity density0.10.20.6-0.10.1-0.8
Bone: cortical apparent density1.31.62.81.41.7-0.3
Bone: cortical area0.10.20.2-0.2-0.40.5
Bone: cortical porosity0.00.00.10.10.00.3
Bone: cortical porosity0.10.10.2-0.1-0.20.5
Bone: cortical thickness0.60.91.51.11.2-0.1
Bone: cortical thickness1.01.11.71.31.10.7
Bone: cortical tissue density1.21.62.61.41.6-0.2
Bone: elastic displacement1.31.52.3-1.5-1.50.2
Bone: elastic work2.02.53.1-1.2-1.81.7
Bone: endosteal estimation1.63.44.7-1.6-2.21.8
Bone: endosteal perimeter2.75.69.5-2.5-3.10.9
Bone: final force1.62.73.21.81.51.6
Bone: final moment2.03.23.61.91.61.9
Bone: marrow area1.63.44.6-1.5-2.11.8
Bone: maximum diameter1.73.24.3-1.2-2.02.1
Bone: maximum force1.32.23.91.30.92.0
Bone: maximum moment1.62.85.21.51.02.3
Bone: minimum diameter2.03.76.2-2.2-2.5-0.0
Bone: periosteal estimation1.02.02.7-1.1-1.61.5
Bone: periosteal perimeter2.33.96.8-2.1-2.60.6
Bone: post-yield work2.73.65.32.22.30.8
Bone: stiffness1.32.02.91.71.70.6
Bone: tissue strength0.50.50.60.70.80.6
Bone: trabecular number0.81.22.9-0.8-0.3-1.7
Bone: trabecular spacing1.31.64.60.1-0.62.1
Bone: trabecular thickness0.10.20.4-0.2-0.0-0.7
Bone: trabecular tissue density0.60.91.41.11.20.1
Breakpoint value in progressive ratio session0.10.10.30.10.00.6
Distance traveled before self-admin0.00.00.10.30.20.1
Distance traveled after self-admin0.60.71.3-0.8-1.10.4
Delta time in closed arm before/after self-admin1.21.11.61.31.30.4
Delta time in open arm before/after self-admin2.82.74.3-2.0-2.1-0.2
Diff in mean of infusions in LGA sessions4.04.56.82.62.60.3
Extinction: sum of active levers before priming1.01.01.41.11.20.7
Active lever presses in extinction session 61.81.72.01.41.21.4
Delta distance traveled before/after self-admin1.71.82.9-1.5-1.70.4
Delta ambulatory time before/after self-admin1.11.21.8-1.3-1.40.2
Time in closed arm before self-admin0.40.51.4-0.20.2-1.2
Time in closed arm after self-admin0.20.20.6-0.10.1-0.8
Time in open arm before self-admin0.10.10.2-0.3-0.4-0.1
Time in open arm after self-admin1.11.21.7-1.0-1.30.8
Sum of active levers in priming session hrs 5-60.30.30.80.30.20.9
Time to tail flick, vehicle, before self-admin0.20.20.20.40.40.4
Time to tail flick, vehicle, after self-admin0.10.20.2-0.5-0.4-0.3
Time to tail flick, test, before self-admin0.20.20.4-0.5-0.6-0.1
Time to tail flick, test, after self-admin0.50.61.50.00.4-1.2
Delta time to tail flick, vehicle, before/after SA0.40.40.50.70.50.7
Delta time to tail flick, test, before/after SA0.50.40.90.10.6-1.0
Ambulatory time before self-admin0.00.00.00.2-0.00.2
Ambulatory time after self-admin0.50.60.9-0.9-0.9-0.1
Total heroin consumption0.81.01.90.80.51.4
Area under the delay curve1.92.03.51.41.9-0.7
Delay disc. indifference point, 0s delay0.10.10.20.30.40.4
Delay disc. indifference point, 16s delay1.21.21.80.81.4-1.2
Delay disc. indifference point, 2s delay1.01.11.81.21.3-0.2
Delay disc. indifference point, 24s delay0.30.30.50.70.70.2
Delay disc. indifference point, 4s delay2.52.64.61.82.20.0
Delay disc. indifference point, 8s delay1.41.52.51.21.6-0.7
Delay discount exponential model param2.12.23.8-1.5-2.00.7
Delay discount hyperbolic model param1.82.03.4-1.5-1.90.6
Fecal boli incidents, locomotor time 10.20.20.4-0.1-0.30.6
Change in fecal boli incidents, locomotor task1.11.01.4-1.2-1.0-0.7
Time >=10cm from walls, locomotor time 10.30.30.70.40.10.8
Bouts of movement, locomotor time 10.80.91.31.11.00.7
Total resting periods, locomotor time 11.61.82.61.61.50.6
Rest time, locomotor task time 10.40.41.10.40.11.1
Distance moved, locomotor task time 10.00.00.0-0.1-0.2-0.1
Vertical activity count, locomotor time 10.10.10.20.20.2-0.4
Time >=10cm from walls, locomotor time 20.10.10.2-0.4-0.4-0.3
Bouts of movement, locomotor time 22.52.63.82.02.00.5
Total resting periods, locomotor time 23.03.24.62.12.10.6
Rest time, locomotor task time 20.10.20.30.20.5-0.4
Distance moved, locomotor task time 21.11.32.4-1.1-1.50.6
Vertical activity count, locomotor time 21.21.32.2-1.1-1.50.7
Weight adjusted by age0.50.60.7-0.5-0.90.9
Seeking ratio, delayed vs. immediate footshock0.70.81.9-0.7-0.3-1.4
Locomotion in novel chamber4.15.16.6-2.6-2.3-1.8
Locomotion in novel chamber post-restriction0.20.20.2-0.4-0.4-0.5
Progressive ratio0.60.71.10.91.1-0.2
Food seeking constrained by brief footshock0.10.10.2-0.1-0.30.5
Seeking ratio, punishment vs. effort0.20.30.4-0.4-0.60.7
Run reversals in cocaine runway, females2.22.24.0-1.3-0.9-2.0
Run reversals in cocaine runway, males1.00.91.6-1.1-1.3-0.0
Latency to leave start box in cocaine runway0.40.50.9-0.4-0.70.9
Latency to leave start box in cocaine runway, F0.10.10.20.0-0.10.4
Latency to leave start box in cocaine runway, M0.50.51.3-0.0-0.41.2
Cd content in liver0.30.30.50.50.7-0.3
Co content in liver0.50.61.0-0.8-1.00.2
Cu content in liver2.42.97.3-1.1-0.3-2.7
Fe content in liver0.10.10.1-0.3-0.3-0.2
K content in liver0.30.30.50.40.40.7
Mg content in liver0.30.30.40.60.70.4
Mn content in liver0.30.30.5-0.4-0.70.6
Na content in liver0.80.91.90.40.8-1.4
Rb content in liver0.30.40.70.50.8-0.4
Se content in liver0.30.40.5-0.7-0.5-0.7
Sr content in liver0.20.20.5-0.2-0.1-0.7
Zn content in liver0.80.91.8-0.7-0.5-1.3