# | tissue | modality | RNA phenotype | h2 | h2 se | h2 P | eQTL R2 | BLUP R2 | ENET R2 | LASSO R2 | eQTL P | BLUP P | ENET P | LASSO P |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Adipose | alternative polyA | ENSRNOT00000079456 | 0.0256 | 0.0172 | 1.7e-03 | 0.007 | 0.013 | 0.007 | 0.006 | 5.2e-02 | 1.3e-02 | 4.5e-02 | 6.0e-02 |
2 | Adipose | alternative polyA | ENSRNOT00000116008 | 0.0218 | 0.0155 | 5.4e-03 | 0.004 | 0.009 | 0.005 | 0.003 | 1.0e-01 | 3.4e-02 | 7.3e-02 | 1.5e-01 |
3 | Adipose | alternative polyA | ENSRNOT00000079456 | 0.0296 | 0.0191 | 5.6e-04 | 0.012 | 0.018 | 0.014 | 0.012 | 1.5e-02 | 4.2e-03 | 9.6e-03 | 1.5e-02 |
4 | Adipose | alternative polyA | ENSRNOT00000116008 | 0.0268 | 0.0179 | 1.3e-03 | 0.011 | 0.015 | 0.014 | 0.010 | 1.9e-02 | 7.7e-03 | 9.0e-03 | 2.6e-02 |
5 | Adipose | alternative TSS | ENSRNOT00000079456 | 0.0492 | 0.0327 | 1.1e-05 | 0.032 | 0.032 | 0.030 | 0.028 | 1.5e-04 | 1.7e-04 | 2.3e-04 | 3.9e-04 |
6 | Adipose | alternative TSS | ENSRNOT00000116008 | 0.0464 | 0.0302 | 1.5e-05 | 0.039 | 0.030 | 0.028 | 0.027 | 3.0e-05 | 2.6e-04 | 3.6e-04 | 4.7e-04 |
7 | Adipose | alternative TSS | ENSRNOT00000079456 | 0.0558 | 0.0377 | 5.1e-06 | 0.028 | 0.035 | 0.034 | 0.031 | 4.3e-04 | 7.5e-05 | 1.1e-04 | 2.1e-04 |
8 | Adipose | alternative TSS | ENSRNOT00000116008 | 0.0484 | 0.0319 | 1.4e-05 | 0.024 | 0.029 | 0.028 | 0.025 | 1.0e-03 | 2.9e-04 | 3.6e-04 | 7.0e-04 |
9 | Adipose | gene expression | ENSRNOG00000057569 | 0.0380 | 0.0280 | 6.9e-03 | 0.015 | 0.005 | 0.002 | 0.004 | 7.2e-03 | 8.1e-02 | 1.6e-01 | 9.9e-02 |
10 | Adipose | isoform ratio | ENSRNOT00000079456 | 0.0660 | 0.0390 | 1.8e-05 | 0.029 | 0.041 | 0.034 | 0.037 | 2.9e-04 | 2.2e-05 | 9.5e-05 | 5.1e-05 |
11 | Adipose | isoform ratio | ENSRNOT00000088387 | 0.2500 | 0.1000 | 0.0e+00 | 0.103 | 0.183 | 0.180 | 0.186 | 1.9e-11 | 6.9e-20 | 1.3e-19 | 3.6e-20 |
12 | Adipose | isoform ratio | ENSRNOT00000116008 | 0.4100 | 0.1200 | 0.0e+00 | 0.219 | 0.319 | 0.321 | 0.323 | 5.7e-24 | 4.0e-36 | 2.4e-36 | 1.1e-36 |
13 | Adipose | mRNA stability | ENSRNOG00000057569 | 0.0380 | 0.0280 | 3.0e-04 | 0.029 | 0.018 | 0.020 | 0.019 | 3.0e-04 | 4.1e-03 | 2.6e-03 | 3.1e-03 |
14 | Liver | gene expression | ENSRNOG00000057569 | 0.0300 | 0.0200 | 3.7e-04 | 0.029 | 0.018 | 0.021 | 0.019 | 3.3e-04 | 4.1e-03 | 1.8e-03 | 2.7e-03 |
15 | Liver | isoform ratio | ENSRNOT00000079456 | 0.0214 | 0.0149 | 4.2e-03 | 0.022 | 0.010 | 0.014 | 0.010 | 1.4e-03 | 2.6e-02 | 1.0e-02 | 2.3e-02 |
16 | Liver | intron excision ratio | chr1:205904472:205907734 | 0.1303 | 0.0685 | 7.3e-12 | 0.074 | 0.069 | 0.072 | 0.071 | 1.3e-08 | 4.0e-08 | 2.2e-08 | 2.8e-08 |
17 | Liver | intron excision ratio | chr1:205904850:205905613 | 0.0616 | 0.0368 | 1.8e-05 | 0.034 | 0.038 | 0.035 | 0.032 | 1.1e-04 | 3.8e-05 | 8.0e-05 | 1.6e-04 |
18 | Liver | intron excision ratio | chr1:205905234:205907734 | 0.1363 | 0.0695 | 5.7e-13 | 0.078 | 0.078 | 0.076 | 0.077 | 4.7e-09 | 4.9e-09 | 8.5e-09 | 6.7e-09 |
19 | Liver | intron excision ratio | chr1:205905996:205907734 | 0.1303 | 0.0672 | 1.5e-12 | 0.075 | 0.079 | 0.077 | 0.075 | 1.0e-08 | 4.4e-09 | 6.1e-09 | 1.1e-08 |
All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, the gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method.
Trait | Avg chi2 ratio | Avg chi2 | Max chi2 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
dissection: UMAP 1 of all traits | 0.2 | 0.8 | 2.1 | -0.8 | 0.7 | -0.8 | 0.7 | -0.8 | 0.8 | -0.9 | 0.9 | 0.1 | -0.3 | -1.4 | 1.4 | -0.8 | -0.8 | 0.8 | -1.0 | 0.7 | -1.0 | -1.1 |
retroperitoneal_fat_g | 2.2 | 7.3 | 10.0 | -2.9 | 3.0 | -2.9 | 3.0 | -2.9 | 2.9 | -2.7 | 2.8 | -0.7 | -3.2 | -2.1 | 2.4 | -2.9 | -2.9 | 2.9 | -2.5 | 2.7 | -2.5 | -2.3 |
body_g | 3.5 | 14.6 | 19.3 | 4.0 | -4.0 | 4.0 | -3.9 | 3.9 | -3.9 | 4.1 | -4.1 | -0.3 | 2.9 | 4.0 | -4.4 | 3.9 | 3.9 | -3.9 | 4.1 | -3.2 | 4.1 | 4.2 |
dissection: UMAP 3 of all traits | 0.9 | 2.6 | 4.0 | -1.7 | 1.7 | -1.7 | 1.7 | -1.7 | 1.7 | -1.5 | 1.6 | -1.0 | -2.0 | -1.6 | 1.7 | -1.7 | -1.7 | 1.7 | -1.5 | 1.7 | -1.5 | -1.2 |
kidney_right_g | 0.2 | 0.5 | 2.2 | 0.5 | -0.4 | 0.5 | -0.5 | 0.5 | -0.5 | 0.4 | -0.4 | 1.5 | 1.0 | 1.3 | -1.1 | 0.5 | 0.5 | -0.5 | 0.2 | -1.2 | 0.2 | 0.3 |
dissection: PC 3 of all traits | 1.6 | 3.9 | 5.5 | -2.2 | 2.3 | -2.2 | 2.3 | -2.0 | 2.0 | -2.1 | 2.2 | 0.2 | -2.0 | -1.1 | 1.7 | -2.0 | -2.0 | 2.0 | -2.3 | 1.5 | -2.3 | -1.8 |
dissection: PC 2 of all traits | 0.3 | 0.7 | 2.0 | 0.8 | -0.9 | 0.9 | -0.9 | 0.9 | -0.9 | 0.6 | -0.7 | 0.9 | 1.4 | 0.5 | -0.6 | 0.9 | 0.9 | -0.9 | 0.7 | -1.0 | 0.7 | 0.3 |
glucose_mg_dl | 2.5 | 3.9 | 5.0 | -2.2 | 2.2 | -2.2 | 2.2 | -2.1 | 2.1 | -2.1 | 2.2 | 0.1 | -2.0 | -1.3 | 1.6 | -2.1 | -2.1 | 2.1 | -2.0 | 1.7 | -2.0 | -1.9 |
heart_g | 0.9 | 1.3 | 3.7 | -1.0 | 1.0 | -1.1 | 1.1 | -1.2 | 1.2 | -0.9 | 0.9 | -1.4 | -1.9 | -1.3 | 1.1 | -1.2 | -1.2 | 1.2 | -0.7 | 1.6 | -0.7 | -0.4 |
os_mean | 0.0 | 0.1 | 0.4 | 0.1 | -0.1 | 0.1 | -0.2 | 0.2 | -0.2 | 0.0 | -0.0 | 0.6 | 0.5 | 0.2 | -0.1 | 0.2 | 0.2 | -0.2 | 0.1 | -0.3 | 0.1 | -0.2 |
EDL weight in grams | 6.3 | 25.3 | 30.9 | 5.3 | -5.2 | 5.2 | -5.2 | 5.2 | -5.2 | 5.3 | -5.3 | 0.2 | 4.4 | 5.1 | -5.6 | 5.2 | 5.2 | -5.2 | 5.2 | -4.6 | 5.2 | 5.2 |
Tibia length in mm | 1.7 | 4.7 | 10.3 | 2.0 | -1.9 | 2.1 | -2.1 | 2.0 | -2.0 | 1.7 | -1.8 | 2.9 | 3.2 | 2.9 | -2.4 | 2.0 | 2.0 | -2.0 | 1.0 | -3.2 | 1.0 | 1.3 |
sol weight in grams | 2.7 | 7.7 | 9.0 | -2.9 | 2.9 | -3.0 | 3.0 | -3.0 | 3.0 | -2.8 | 2.9 | -0.8 | -2.9 | -2.7 | 2.8 | -3.0 | -3.0 | 3.0 | -2.5 | 2.8 | -2.5 | -2.6 |
TA weight in grams | 9.7 | 33.2 | 37.8 | 6.1 | -6.1 | 6.1 | -6.2 | 6.0 | -6.0 | 6.0 | -6.0 | 1.2 | 5.6 | 5.8 | -6.0 | 6.0 | 6.0 | -6.0 | 5.5 | -5.6 | 5.5 | 5.6 |
Average time between licks in bursts | 0.9 | 1.3 | 4.7 | 1.0 | -1.0 | 0.9 | -0.9 | 1.0 | -1.0 | 1.2 | -1.2 | -2.2 | -0.4 | -0.0 | -0.6 | 1.0 | 1.0 | -1.0 | 1.7 | 0.4 | 1.7 | 1.5 |
Std. dev. time between licks in bursts | 0.4 | 0.5 | 3.4 | -0.3 | 0.3 | -0.4 | 0.4 | -0.3 | 0.3 | -0.1 | 0.1 | -1.8 | -1.2 | -1.0 | 0.6 | -0.3 | -0.3 | 0.3 | 0.4 | 1.2 | 0.4 | 0.2 |
Number of licking bursts | 0.0 | 0.0 | 0.0 | -0.1 | 0.1 | -0.1 | 0.1 | -0.1 | 0.1 | -0.1 | 0.1 | 0.1 | -0.1 | 0.2 | -0.2 | -0.1 | -0.1 | 0.1 | 0.1 | 0.1 | 0.1 | -0.0 |
Food consumed during 24 hour testing period | 0.1 | 0.1 | 0.4 | -0.4 | 0.4 | -0.4 | 0.3 | -0.0 | 0.0 | -0.4 | 0.4 | 0.6 | 0.2 | 0.1 | 0.1 | -0.0 | -0.0 | 0.0 | -0.3 | -0.1 | -0.3 | -0.6 |
Water consumed over 24 hour session | 0.4 | 0.5 | 1.1 | 0.7 | -0.7 | 0.7 | -0.7 | 0.8 | -0.8 | 0.7 | -0.7 | -0.4 | 0.5 | 0.5 | -0.7 | 0.8 | 0.8 | -0.8 | 1.0 | -0.3 | 1.0 | 0.7 |
Times rat made contact with spout | 0.2 | 0.2 | 0.9 | 0.4 | -0.4 | 0.3 | -0.3 | 0.4 | -0.4 | 0.4 | -0.4 | -0.9 | -0.2 | -0.3 | 0.0 | 0.4 | 0.4 | -0.4 | 0.7 | 0.3 | 0.7 | 0.5 |
Average drop size | 0.1 | 0.1 | 0.5 | -0.2 | 0.2 | -0.2 | 0.2 | -0.0 | 0.0 | -0.3 | 0.3 | 0.7 | 0.3 | 0.2 | 0.0 | -0.0 | -0.0 | 0.0 | -0.3 | -0.2 | -0.3 | -0.4 |
light_reinforcement_lr_relactive | 0.6 | 0.7 | 5.2 | -0.6 | 0.7 | -0.5 | 0.5 | -0.5 | 0.5 | -0.7 | 0.7 | 2.3 | 0.8 | 0.7 | -0.1 | -0.5 | -0.5 | 0.5 | -1.1 | -0.8 | -1.1 | -1.0 |
light_reinforcement_lr_active | 0.1 | 0.1 | 0.2 | -0.4 | 0.4 | -0.4 | 0.4 | -0.3 | 0.3 | -0.4 | 0.4 | -0.1 | -0.2 | -0.4 | 0.4 | -0.3 | -0.3 | 0.3 | -0.2 | 0.4 | -0.2 | -0.5 |
Delay discounting water rate 0 sec | 0.4 | 0.7 | 1.4 | -0.8 | 0.8 | -0.9 | 0.9 | -0.7 | 0.7 | -0.8 | 0.8 | -0.9 | -1.0 | -1.1 | 1.0 | -0.7 | -0.7 | 0.7 | -0.4 | 1.2 | -0.4 | -0.7 |
Median of all reaction times | 0.1 | 0.2 | 1.1 | 0.0 | 0.0 | 0.1 | -0.1 | 0.2 | -0.2 | -0.1 | 0.0 | 1.1 | 0.8 | 0.1 | 0.1 | 0.2 | 0.2 | -0.2 | -0.6 | -0.7 | -0.6 | -0.3 |
locomotor_testing_activity | 1.0 | 1.6 | 5.0 | -1.0 | 0.9 | -1.1 | 1.0 | -1.1 | 1.1 | -0.8 | 0.8 | -2.2 | -2.1 | -1.9 | 1.5 | -1.1 | -1.1 | 1.1 | -0.3 | 2.1 | -0.3 | -0.4 |
reaction_time_corr | 0.6 | 0.8 | 2.0 | 0.8 | -0.9 | 0.8 | -0.8 | 0.9 | -0.9 | 0.9 | -0.9 | -0.8 | 0.4 | 0.7 | -0.9 | 0.9 | 0.9 | -0.9 | 1.4 | -0.3 | 1.4 | 0.9 |
reaction_time_leftcorr | 0.6 | 0.8 | 2.0 | 0.8 | -0.9 | 0.8 | -0.8 | 0.9 | -0.9 | 0.9 | -0.9 | -0.8 | 0.4 | 0.7 | -0.9 | 0.9 | 0.9 | -0.9 | 1.4 | -0.3 | 1.4 | 0.9 |
delay_discounting_pc1800 | 0.6 | 0.8 | 1.5 | 0.9 | -0.9 | 0.9 | -0.9 | 1.0 | -1.0 | 0.7 | -0.8 | 0.9 | 1.2 | 1.0 | -0.7 | 1.0 | 1.0 | -1.0 | 0.5 | -1.1 | 0.5 | 0.5 |
reaction_time_falsealarm | 0.5 | 0.7 | 4.4 | -0.4 | 0.3 | -0.5 | 0.4 | -0.5 | 0.5 | -0.3 | 0.3 | -2.1 | -1.5 | -1.4 | 1.0 | -0.5 | -0.5 | 0.5 | 0.1 | 1.5 | 0.1 | 0.1 |
social_reinforcement_socialrfq | 0.2 | 0.2 | 0.5 | 0.4 | -0.4 | 0.3 | -0.3 | 0.3 | -0.3 | 0.4 | -0.4 | -0.4 | 0.1 | 0.5 | -0.5 | 0.3 | 0.3 | -0.3 | 0.7 | -0.1 | 0.7 | 0.5 |
reaction_time_pinit | 5.1 | 7.3 | 12.5 | 2.8 | -2.8 | 2.7 | -2.7 | 2.7 | -2.7 | 3.0 | -2.9 | -1.7 | 1.5 | 1.9 | -2.7 | 2.7 | 2.7 | -2.7 | 3.5 | -1.5 | 3.5 | 3.1 |
reaction_time_pinit_slope | 2.5 | 3.2 | 4.5 | -1.9 | 1.9 | -1.8 | 1.9 | -1.9 | 1.9 | -1.8 | 1.9 | 0.1 | -1.6 | -1.5 | 1.9 | -1.9 | -1.9 | 1.9 | -2.1 | 1.5 | -2.1 | -1.7 |
reaction_time_peropfalsealarm_slope | 0.8 | 0.9 | 1.5 | -1.0 | 0.9 | -1.0 | 1.0 | -1.0 | 1.0 | -1.1 | 1.0 | -0.2 | -0.7 | -1.2 | 1.2 | -1.0 | -1.0 | 1.0 | -0.8 | 1.0 | -0.8 | -1.1 |
soc_socialavgti | 0.1 | 0.1 | 0.3 | -0.3 | 0.2 | -0.3 | 0.2 | -0.4 | 0.4 | -0.3 | 0.3 | -0.2 | -0.3 | -0.5 | 0.4 | -0.4 | -0.4 | 0.4 | -0.1 | 0.5 | -0.1 | -0.3 |
reaction_time_peropinit_slope | 1.9 | 2.0 | 2.8 | -1.5 | 1.4 | -1.5 | 1.5 | -1.4 | 1.4 | -1.5 | 1.5 | -0.5 | -1.3 | -1.7 | 1.7 | -1.4 | -1.4 | 1.4 | -1.2 | 1.5 | -1.2 | -1.5 |
reaction_time_meanrt_slope | 1.2 | 1.4 | 3.4 | 1.0 | -0.9 | 1.0 | -1.0 | 1.3 | -1.3 | 0.8 | -0.9 | 1.5 | 1.8 | 1.4 | -1.2 | 1.3 | 1.3 | -1.3 | 0.6 | -1.7 | 0.6 | 0.5 |
reaction_time_devmedrt_slope | 1.5 | 1.5 | 2.2 | 1.2 | -1.1 | 1.2 | -1.2 | 1.3 | -1.3 | 1.2 | -1.2 | 0.4 | 1.3 | 1.5 | -1.5 | 1.3 | 1.3 | -1.3 | 1.2 | -1.4 | 1.2 | 1.1 |
pavca_ny_levercs_d4d5 | 0.4 | 0.6 | 1.2 | 0.6 | -0.6 | 0.6 | -0.6 | 0.9 | -0.9 | 0.6 | -0.6 | 0.7 | 1.1 | 1.0 | -0.9 | 0.9 | 0.9 | -0.9 | 0.6 | -1.0 | 0.6 | 0.3 |
pavca_ny_d2_magazine_cs | 1.6 | 1.8 | 2.3 | -1.4 | 1.4 | -1.5 | 1.5 | -1.4 | 1.4 | -1.4 | 1.4 | -0.5 | -1.5 | -1.2 | 1.4 | -1.4 | -1.4 | 1.4 | -1.1 | 1.5 | -1.1 | -1.3 |
ccp_trial_3_saline_dist_mm | 2.6 | 3.2 | 4.5 | 1.8 | -1.8 | 1.8 | -1.8 | 1.9 | -1.9 | 2.0 | -1.9 | -0.8 | 1.1 | 1.4 | -1.8 | 1.9 | 1.9 | -1.9 | 2.1 | -1.2 | 2.1 | 2.0 |
pavca_ny_d5_magazine_ncs | 1.0 | 1.3 | 1.6 | -1.2 | 1.2 | -1.2 | 1.2 | -1.3 | 1.3 | -1.2 | 1.2 | 0.2 | -1.0 | -0.8 | 1.0 | -1.3 | -1.3 | 1.3 | -1.1 | 0.9 | -1.1 | -1.1 |
ccp_change_in_locomotor_activity | 0.5 | 0.6 | 0.8 | 0.9 | -0.9 | 0.9 | -0.9 | 0.9 | -0.9 | 0.9 | -0.9 | -0.1 | 0.6 | 0.6 | -0.7 | 0.9 | 0.9 | -0.9 | 0.7 | -0.6 | 0.7 | 0.9 |
Conditioned locomotion | 1.7 | 2.1 | 3.2 | -1.5 | 1.6 | -1.5 | 1.6 | -1.5 | 1.5 | -1.5 | 1.6 | 0.4 | -1.3 | -1.0 | 1.4 | -1.5 | -1.5 | 1.5 | -1.8 | 1.0 | -1.8 | -1.4 |
Total sessions with >9 infusions | 1.5 | 1.6 | 3.1 | -1.3 | 1.4 | -1.3 | 1.4 | -1.3 | 1.3 | -1.1 | 1.2 | -0.8 | -1.7 | -1.2 | 1.1 | -1.3 | -1.3 | 1.3 | -1.3 | 1.4 | -1.3 | -0.8 |
Velocity during novelty place preference test | 0.0 | 0.0 | 0.2 | 0.2 | -0.2 | 0.2 | -0.2 | -0.1 | 0.1 | 0.2 | -0.2 | -0.5 | -0.2 | -0.1 | 0.0 | -0.1 | -0.1 | 0.1 | 0.1 | 0.1 | 0.1 | 0.4 |
crf_mi_active_responses | 1.0 | 1.2 | 2.4 | 1.0 | -1.0 | 1.1 | -1.1 | 1.0 | -1.0 | 1.0 | -1.0 | 1.1 | 1.4 | 1.4 | -1.3 | 1.0 | 1.0 | -1.0 | 0.6 | -1.5 | 0.6 | 0.8 |
pavca_mi_d1_avg_mag_lat | 0.3 | 0.4 | 2.5 | -0.3 | 0.2 | -0.3 | 0.3 | -0.2 | 0.2 | -0.2 | 0.2 | -1.6 | -0.9 | -1.2 | 0.7 | -0.2 | -0.2 | 0.2 | 0.3 | 1.1 | 0.3 | -0.1 |
pavca_mi_d3_magazine_ncs | 0.4 | 0.5 | 1.1 | -0.7 | 0.7 | -0.6 | 0.6 | -0.6 | 0.6 | -0.8 | 0.8 | 1.0 | 0.1 | -0.2 | 0.6 | -0.6 | -0.6 | 0.6 | -0.9 | 0.1 | -0.9 | -1.0 |
pavca_mi_d1_prob_lev | 1.4 | 1.9 | 2.9 | 1.5 | -1.4 | 1.4 | -1.4 | 1.3 | -1.3 | 1.6 | -1.5 | -0.1 | 0.9 | 1.5 | -1.7 | 1.3 | 1.3 | -1.3 | 1.4 | -1.2 | 1.4 | 1.7 |
pavca_mi_d1_avg_lev_lat | 1.4 | 2.0 | 3.5 | -1.5 | 1.4 | -1.5 | 1.4 | -1.3 | 1.3 | -1.5 | 1.5 | -0.3 | -1.2 | -1.8 | 1.9 | -1.3 | -1.3 | 1.3 | -1.4 | 1.5 | -1.4 | -1.6 |
pavca_mi_d3_prob_mag | 0.2 | 0.2 | 1.1 | -0.2 | 0.1 | -0.3 | 0.2 | -0.3 | 0.3 | -0.2 | 0.2 | -1.1 | -0.8 | -0.7 | 0.5 | -0.3 | -0.3 | 0.3 | 0.2 | 0.9 | 0.2 | -0.0 |
Total cortical area | 1.9 | 3.7 | 5.6 | 2.1 | -2.3 | 2.1 | -2.2 | 2.0 | -2.0 | 2.0 | -2.1 | -0.6 | 1.8 | 0.9 | -1.5 | 2.0 | 2.0 | -2.0 | 2.4 | -1.3 | 2.4 | 1.9 |
tb_th_sd | 0.1 | 0.2 | 0.9 | -0.3 | 0.4 | -0.3 | 0.3 | -0.2 | 0.2 | -0.3 | 0.4 | 0.9 | 0.3 | -0.0 | 0.2 | -0.2 | -0.2 | 0.2 | -0.7 | -0.3 | -0.7 | -0.5 |
Cortical porosity | 0.1 | 0.1 | 0.3 | -0.1 | 0.1 | -0.1 | 0.1 | -0.2 | 0.2 | -0.2 | 0.2 | 0.4 | 0.0 | -0.4 | 0.5 | -0.2 | -0.2 | 0.2 | -0.5 | 0.1 | -0.5 | -0.3 |
length | 0.2 | 0.5 | 2.0 | 0.5 | -0.5 | 0.5 | -0.6 | 0.7 | -0.7 | 0.3 | -0.3 | 1.3 | 1.4 | 0.7 | -0.4 | 0.7 | 0.7 | -0.7 | 0.3 | -1.0 | 0.3 | -0.2 |
Trabecular tissue density | 4.3 | 6.1 | 7.8 | -2.5 | 2.5 | -2.5 | 2.5 | -2.6 | 2.6 | -2.5 | 2.5 | -0.4 | -2.3 | -2.7 | 2.8 | -2.6 | -2.6 | 2.6 | -2.4 | 2.4 | -2.4 | -2.4 |
ctth_sd | 5.3 | 6.3 | 8.3 | 2.6 | -2.7 | 2.6 | -2.6 | 2.6 | -2.6 | 2.7 | -2.7 | -0.5 | 2.0 | 2.3 | -2.6 | 2.6 | 2.6 | -2.6 | 2.9 | -2.0 | 2.9 | 2.6 |
tautz: manual_spc7 | 0.6 | 0.9 | 1.2 | -1.0 | 1.1 | -1.0 | 1.0 | -1.0 | 1.0 | -1.1 | 1.1 | 0.5 | -0.6 | -0.6 | 0.8 | -1.0 | -1.0 | 1.0 | -1.1 | 0.6 | -1.1 | -1.1 |
tautz: manual_mpc15 | 1.2 | 1.6 | 2.0 | -1.3 | 1.3 | -1.3 | 1.3 | -1.4 | 1.4 | -1.3 | 1.3 | -0.2 | -1.1 | -1.4 | 1.3 | -1.4 | -1.4 | 1.4 | -1.1 | 1.3 | -1.1 | -1.3 |
tautz: manual_mpc18 | 1.2 | 1.6 | 2.2 | 1.3 | -1.4 | 1.3 | -1.4 | 1.5 | -1.5 | 1.3 | -1.3 | 0.0 | 1.2 | 1.0 | -1.1 | 1.5 | 1.5 | -1.5 | 1.2 | -1.1 | 1.2 | 1.2 |
tautz: manual_spc15 | 2.5 | 3.8 | 6.8 | 2.0 | -2.1 | 1.9 | -2.0 | 1.9 | -1.9 | 2.1 | -2.1 | -1.4 | 1.0 | 1.3 | -1.9 | 1.9 | 1.9 | -1.9 | 2.6 | -0.9 | 2.6 | 2.2 |
tautz: manual_spc21 | 4.3 | 5.4 | 8.3 | -2.6 | 2.6 | -2.5 | 2.5 | -2.3 | 2.3 | -2.7 | 2.7 | 0.9 | -1.5 | -1.8 | 2.3 | -2.3 | -2.3 | 2.3 | -2.4 | 1.8 | -2.4 | -2.9 |
tautz: manual_spc9 | 1.6 | 2.4 | 3.0 | -1.6 | 1.6 | -1.6 | 1.6 | -1.7 | 1.7 | -1.7 | 1.7 | 0.2 | -1.2 | -1.5 | 1.6 | -1.7 | -1.7 | 1.7 | -1.5 | 1.4 | -1.5 | -1.7 |
tautz: manual_mpc3 | 2.3 | 3.5 | 4.8 | 1.9 | -1.9 | 1.9 | -1.9 | 1.9 | -1.9 | 2.0 | -2.0 | -0.0 | 1.5 | 2.0 | -2.2 | 1.9 | 1.9 | -1.9 | 2.1 | -1.6 | 2.1 | 2.0 |
tautz: manual_spc12 | 1.7 | 2.4 | 3.8 | 1.6 | -1.7 | 1.6 | -1.6 | 1.7 | -1.7 | 1.7 | -1.7 | -1.6 | 0.7 | 0.4 | -1.0 | 1.7 | 1.7 | -1.7 | 2.0 | -0.4 | 2.0 | 1.7 |
tautz: manual_spc14 | 2.9 | 4.3 | 5.1 | -2.2 | 2.3 | -2.2 | 2.3 | -2.2 | 2.2 | -2.2 | 2.2 | -0.3 | -2.1 | -1.7 | 2.0 | -2.2 | -2.2 | 2.2 | -2.1 | 1.9 | -2.1 | -1.9 |
tautz: manual_spc8 | 3.4 | 4.9 | 6.0 | 2.4 | -2.5 | 2.4 | -2.4 | 2.4 | -2.4 | 2.4 | -2.4 | 0.0 | 2.1 | 1.8 | -2.0 | 2.4 | 2.4 | -2.4 | 2.0 | -2.1 | 2.0 | 2.3 |
tautz: manual_mpc7 | 0.1 | 0.1 | 0.6 | 0.0 | -0.1 | 0.0 | -0.1 | 0.3 | -0.3 | 0.1 | -0.1 | -0.8 | -0.1 | -0.4 | 0.1 | 0.3 | 0.3 | -0.3 | 0.5 | 0.4 | 0.5 | -0.0 |
tautz: manual_mpc16 | 1.0 | 1.4 | 6.2 | 1.1 | -1.1 | 0.9 | -0.9 | 0.8 | -0.8 | 1.3 | -1.3 | -2.5 | -0.5 | -0.1 | -0.7 | 0.8 | 0.8 | -0.8 | 1.6 | 0.4 | 1.6 | 1.7 |
tautz: manual_mpc4 | 0.3 | 0.3 | 0.6 | -0.4 | 0.4 | -0.4 | 0.4 | -0.7 | 0.7 | -0.4 | 0.4 | -0.5 | -0.8 | -0.8 | 0.7 | -0.7 | -0.7 | 0.7 | -0.7 | 0.6 | -0.7 | -0.2 |
tautz: manual_mpc10 | 2.0 | 2.9 | 3.8 | 1.9 | -2.0 | 1.8 | -1.9 | 1.8 | -1.8 | 1.9 | -1.9 | -0.9 | 1.2 | 0.7 | -1.2 | 1.8 | 1.8 | -1.8 | 1.9 | -1.0 | 1.9 | 1.8 |
tautz: manual_mpc5 | 0.0 | 0.0 | 0.1 | -0.0 | 0.1 | -0.0 | 0.0 | -0.1 | 0.1 | 0.0 | 0.0 | 0.1 | -0.1 | 0.3 | -0.1 | -0.1 | -0.1 | 0.1 | -0.1 | -0.1 | -0.1 | 0.1 |
tautz: manual_spc22 | 0.7 | 1.1 | 9.8 | 0.4 | -0.6 | 0.3 | -0.3 | 0.4 | -0.4 | 0.5 | -0.6 | -3.1 | -0.9 | -1.3 | 0.5 | 0.4 | 0.4 | -0.4 | 1.3 | 1.4 | 1.3 | 0.7 |
tautz: manual_mpc14 | 1.9 | 3.3 | 4.6 | -2.0 | 2.1 | -2.0 | 2.1 | -2.0 | 2.0 | -1.8 | 1.9 | 0.0 | -1.9 | -1.0 | 1.3 | -2.0 | -2.0 | 2.0 | -2.0 | 1.4 | -2.0 | -1.5 |
tautz: manual_mpc12 | 3.1 | 4.7 | 7.5 | -2.3 | 2.5 | -2.4 | 2.5 | -2.4 | 2.4 | -2.0 | 2.2 | -1.1 | -2.7 | -1.5 | 1.6 | -2.4 | -2.4 | 2.4 | -1.8 | 2.2 | -1.8 | -1.6 |
tautz: manual_mcs | 0.3 | 0.4 | 0.5 | 0.6 | -0.6 | 0.6 | -0.6 | 0.6 | -0.6 | 0.6 | -0.6 | 0.3 | 0.7 | 0.7 | -0.7 | 0.6 | 0.6 | -0.6 | 0.5 | -0.7 | 0.5 | 0.5 |
tautz: manual_spc17 | 1.2 | 1.6 | 3.2 | 1.3 | -1.3 | 1.3 | -1.3 | 1.2 | -1.2 | 1.6 | -1.5 | -0.9 | 0.5 | 1.2 | -1.5 | 1.2 | 1.2 | -1.2 | 1.4 | -0.9 | 1.4 | 1.8 |
tautz: manual_spc24 | 0.0 | 0.0 | 0.2 | -0.0 | 0.1 | -0.1 | 0.1 | -0.1 | 0.1 | 0.1 | -0.0 | -0.5 | -0.4 | 0.2 | -0.2 | -0.1 | -0.1 | 0.1 | 0.0 | 0.1 | 0.0 | 0.3 |
tautz: manual_spc4 | 0.1 | 0.2 | 0.4 | 0.5 | -0.6 | 0.5 | -0.5 | 0.4 | -0.4 | 0.4 | -0.4 | -0.0 | 0.5 | -0.1 | -0.1 | 0.4 | 0.4 | -0.4 | 0.6 | -0.2 | 0.6 | 0.2 |
tautz: manual_mpc9 | 0.2 | 0.3 | 0.6 | -0.6 | 0.6 | -0.6 | 0.6 | -0.5 | 0.5 | -0.7 | 0.6 | 0.4 | -0.2 | -0.3 | 0.4 | -0.5 | -0.5 | 0.5 | -0.5 | 0.3 | -0.5 | -0.7 |
tautz: manual_spc2 | 1.0 | 1.3 | 1.7 | 1.2 | -1.2 | 1.2 | -1.2 | 1.1 | -1.1 | 1.3 | -1.2 | 0.2 | 1.0 | 1.2 | -1.3 | 1.1 | 1.1 | -1.1 | 1.0 | -1.2 | 1.0 | 1.3 |
tautz: manual_spc13 | 5.5 | 8.4 | 9.5 | 3.0 | -3.0 | 3.1 | -3.1 | 3.1 | -3.1 | 2.9 | -3.0 | 1.0 | 3.1 | 2.9 | -3.0 | 3.1 | 3.1 | -3.1 | 2.7 | -3.0 | 2.7 | 2.7 |
tautz: manual_mpc19 | 1.0 | 1.2 | 1.7 | -1.2 | 1.2 | -1.2 | 1.2 | -1.2 | 1.2 | -1.2 | 1.2 | 0.5 | -0.7 | -0.7 | 0.9 | -1.2 | -1.2 | 1.2 | -1.1 | 0.8 | -1.1 | -1.3 |
tautz: manual_spc10 | 3.6 | 4.6 | 6.2 | -2.2 | 2.2 | -2.2 | 2.2 | -2.2 | 2.2 | -2.4 | 2.4 | 1.0 | -1.4 | -1.7 | 2.2 | -2.2 | -2.2 | 2.2 | -2.5 | 1.4 | -2.5 | -2.5 |
tautz: manual_spc11 | 0.9 | 1.1 | 4.1 | 1.0 | -1.1 | 0.9 | -0.9 | 0.9 | -0.9 | 1.1 | -1.1 | -2.0 | -0.1 | 0.0 | -0.6 | 0.9 | 0.9 | -0.9 | 1.5 | 0.2 | 1.5 | 1.4 |
tautz: manual_spc23 | 0.4 | 0.6 | 2.0 | -0.7 | 0.6 | -0.8 | 0.7 | -0.6 | 0.6 | -0.9 | 0.8 | -0.4 | -0.5 | -1.4 | 1.3 | -0.6 | -0.6 | 0.6 | -0.5 | 1.0 | -0.5 | -1.0 |
tautz: manual_spc6 | 0.2 | 0.3 | 0.9 | 0.5 | -0.5 | 0.5 | -0.5 | 0.5 | -0.5 | 0.7 | -0.6 | -0.9 | 0.0 | 0.1 | -0.4 | 0.5 | 0.5 | -0.5 | 0.7 | -0.1 | 0.7 | 0.8 |
tautz: manual_spc20 | 0.2 | 0.2 | 0.3 | 0.5 | -0.5 | 0.5 | -0.5 | 0.5 | -0.5 | 0.5 | -0.5 | 0.1 | 0.4 | 0.5 | -0.5 | 0.5 | 0.5 | -0.5 | 0.3 | -0.5 | 0.3 | 0.5 |
tautz: manual_mpc17 | 0.4 | 0.5 | 2.9 | -0.4 | 0.4 | -0.3 | 0.3 | -0.3 | 0.3 | -0.6 | 0.6 | 1.7 | 0.6 | -0.3 | 0.7 | -0.3 | -0.3 | 0.3 | -1.2 | -0.4 | -1.2 | -1.0 |
tautz: manual_mpc2 | 0.7 | 0.9 | 4.4 | 0.7 | -0.7 | 0.8 | -0.8 | 0.8 | -0.8 | 0.4 | -0.5 | 2.1 | 1.7 | 1.0 | -0.6 | 0.8 | 0.8 | -0.8 | 0.2 | -1.3 | 0.2 | -0.1 |
tautz: manual_spc1 | 0.0 | 0.0 | 0.1 | 0.1 | -0.2 | 0.1 | -0.1 | 0.1 | -0.1 | 0.2 | -0.2 | -0.4 | -0.1 | 0.1 | -0.2 | 0.1 | 0.1 | -0.1 | 0.4 | 0.1 | 0.4 | 0.2 |
tautz: manual_spc16 | 1.6 | 2.1 | 3.1 | -1.4 | 1.4 | -1.5 | 1.5 | -1.5 | 1.5 | -1.3 | 1.4 | -1.1 | -1.8 | -1.7 | 1.6 | -1.5 | -1.5 | 1.5 | -1.2 | 1.7 | -1.2 | -1.1 |
tautz: manual_mpc13 | 3.8 | 4.9 | 6.8 | 2.2 | -2.1 | 2.3 | -2.2 | 2.3 | -2.3 | 2.2 | -2.2 | 1.2 | 2.5 | 2.6 | -2.6 | 2.3 | 2.3 | -2.3 | 2.0 | -2.6 | 2.0 | 1.9 |
tautz: manual_spc5 | 2.9 | 4.0 | 5.0 | 2.2 | -2.2 | 2.2 | -2.2 | 2.0 | -2.0 | 2.2 | -2.2 | -0.3 | 1.6 | 1.6 | -2.0 | 2.0 | 2.0 | -2.0 | 2.2 | -1.6 | 2.2 | 2.2 |
tautz: manual_spc3 | 2.1 | 2.6 | 3.4 | -1.6 | 1.7 | -1.7 | 1.7 | -1.8 | 1.8 | -1.5 | 1.6 | -0.5 | -1.8 | -1.5 | 1.5 | -1.8 | -1.8 | 1.8 | -1.6 | 1.6 | -1.6 | -1.3 |
tautz: manual_mpc6 | 1.9 | 2.3 | 3.8 | 1.6 | -1.6 | 1.5 | -1.5 | 1.5 | -1.5 | 1.7 | -1.7 | -0.8 | 0.8 | 1.3 | -1.6 | 1.5 | 1.5 | -1.5 | 1.9 | -0.9 | 1.9 | 1.8 |
tautz: manual_spc18 | 0.0 | 0.0 | 0.1 | -0.2 | 0.2 | -0.2 | 0.2 | -0.1 | 0.1 | -0.2 | 0.2 | 0.1 | 0.1 | -0.2 | 0.3 | -0.1 | -0.1 | 0.1 | -0.1 | 0.1 | -0.1 | -0.4 |
tautz: manual_mpc11 | 0.5 | 0.6 | 1.1 | -0.8 | 0.9 | -0.8 | 0.9 | -0.9 | 0.9 | -0.8 | 0.8 | 0.3 | -0.7 | -0.4 | 0.7 | -0.9 | -0.9 | 0.9 | -1.0 | 0.5 | -1.0 | -0.8 |
tautz: manual_spc19 | 0.7 | 1.1 | 1.4 | 1.1 | -1.1 | 1.0 | -1.1 | 1.2 | -1.2 | 1.1 | -1.1 | -0.3 | 0.9 | 0.7 | -0.9 | 1.2 | 1.2 | -1.2 | 1.1 | -0.8 | 1.1 | 1.0 |
tautz: manual_mpc8 | 0.7 | 0.9 | 2.4 | 1.0 | -0.9 | 0.9 | -0.9 | 0.7 | -0.7 | 1.2 | -1.1 | -1.5 | -0.2 | 0.6 | -1.0 | 0.7 | 0.7 | -0.7 | 1.3 | -0.1 | 1.3 | 1.5 |
tautz: manual_mpc1 | 4.2 | 5.3 | 7.3 | -2.5 | 2.5 | -2.4 | 2.4 | -2.3 | 2.3 | -2.6 | 2.6 | 1.2 | -1.5 | -1.6 | 2.2 | -2.3 | -2.3 | 2.3 | -2.7 | 1.5 | -2.7 | -2.6 |
Sum of all infusions from LGA sessions | 3.5 | 4.1 | 5.2 | 2.2 | -2.2 | 2.2 | -2.2 | 2.2 | -2.2 | 2.0 | -2.1 | 0.7 | 2.3 | 1.9 | -1.8 | 2.2 | 2.2 | -2.2 | 1.9 | -2.0 | 1.9 | 1.7 |
Ambulatory time at time1 of open field | 2.2 | 2.3 | 5.6 | 1.4 | -1.3 | 1.5 | -1.5 | 1.4 | -1.4 | 1.2 | -1.3 | 1.9 | 2.4 | 1.6 | -1.7 | 1.4 | 1.4 | -1.4 | 1.0 | -2.3 | 1.0 | 0.8 |
dd_expon_k | 0.1 | 0.1 | 0.6 | -0.1 | 0.0 | -0.0 | -0.0 | 0.0 | -0.0 | -0.2 | 0.1 | 0.7 | 0.6 | 0.2 | 0.0 | 0.0 | 0.0 | -0.0 | -0.2 | -0.4 | -0.2 | -0.4 |
Delay discounting AUC-traditional | 0.1 | 0.1 | 0.5 | 0.2 | -0.1 | 0.1 | -0.1 | 0.0 | -0.0 | 0.3 | -0.2 | -0.7 | -0.5 | -0.1 | -0.1 | 0.0 | 0.0 | -0.0 | 0.3 | 0.2 | 0.3 | 0.5 |
The total number of resting periods in time1 | 0.2 | 0.2 | 1.3 | 0.4 | -0.4 | 0.4 | -0.5 | 0.3 | -0.3 | 0.1 | -0.2 | 1.1 | 1.1 | 0.0 | -0.0 | 0.3 | 0.3 | -0.3 | -0.1 | -0.7 | -0.1 | -0.2 |
Area under the delay curve | 0.1 | 0.1 | 0.5 | 0.2 | -0.1 | 0.1 | -0.1 | 0.0 | -0.0 | 0.3 | -0.2 | -0.7 | -0.5 | -0.1 | -0.1 | 0.0 | 0.0 | -0.0 | 0.3 | 0.2 | 0.3 | 0.5 |
punishment | 0.2 | 0.2 | 1.1 | -0.3 | 0.2 | -0.3 | 0.3 | -0.5 | 0.5 | -0.2 | 0.2 | -1.0 | -0.8 | -0.7 | 0.4 | -0.5 | -0.5 | 0.5 | 0.1 | 0.8 | 0.1 | -0.0 |
runstartmale1 | 3.0 | 2.9 | 3.6 | -1.9 | 1.9 | -1.9 | 1.9 | -1.7 | 1.7 | -1.8 | 1.8 | -0.1 | -1.8 | -1.5 | 1.7 | -1.7 | -1.7 | 1.7 | -1.7 | 1.7 | -1.7 | -1.6 |
locomotor2 | 2.7 | 3.2 | 4.0 | -1.8 | 1.8 | -1.8 | 1.7 | -2.0 | 2.0 | -1.8 | 1.8 | 0.4 | -1.5 | -1.5 | 1.8 | -2.0 | -2.0 | 2.0 | -2.0 | 1.5 | -2.0 | -1.7 |
Weight adjusted by age | 1.7 | 2.0 | 3.0 | 1.4 | -1.3 | 1.4 | -1.4 | 1.4 | -1.4 | 1.3 | -1.3 | 1.0 | 1.7 | 1.6 | -1.6 | 1.4 | 1.4 | -1.4 | 1.1 | -1.7 | 1.1 | 1.2 |
Liver selenium concentration | 0.5 | 0.6 | 3.7 | 0.5 | -0.4 | 0.5 | -0.5 | 0.5 | -0.5 | 0.3 | -0.3 | 1.9 | 1.3 | 1.4 | -0.9 | 0.5 | 0.5 | -0.5 | -0.1 | -1.3 | -0.1 | 0.1 |
Liver rubidium concentration | 1.5 | 1.9 | 3.4 | -1.4 | 1.4 | -1.5 | 1.5 | -1.5 | 1.5 | -1.2 | 1.3 | -1.1 | -1.8 | -1.4 | 1.2 | -1.5 | -1.5 | 1.5 | -0.9 | 1.7 | -0.9 | -1.0 |
Liver iron concentration | 0.0 | 0.0 | 0.2 | -0.0 | 0.0 | 0.0 | -0.0 | -0.1 | 0.1 | -0.1 | 0.1 | 0.5 | 0.2 | 0.1 | 0.1 | -0.1 | -0.1 | 0.1 | -0.4 | -0.2 | -0.4 | -0.1 |
Liver cobalt concentration | 2.2 | 2.6 | 6.5 | -1.5 | 1.3 | -1.5 | 1.5 | -1.4 | 1.4 | -1.4 | 1.4 | -1.9 | -2.0 | -2.5 | 2.2 | -1.4 | -1.4 | 1.4 | -1.0 | 2.3 | -1.0 | -1.2 |
Liver cadmium concentration | 1.1 | 1.2 | 2.2 | -1.2 | 1.2 | -1.2 | 1.2 | -0.9 | 0.9 | -1.2 | 1.2 | 0.5 | -0.7 | -0.8 | 1.2 | -0.9 | -0.9 | 0.9 | -1.5 | 0.7 | -1.5 | -1.3 |
Liver zinc concentration | 4.2 | 4.6 | 6.0 | 2.3 | -2.2 | 2.3 | -2.3 | 2.2 | -2.2 | 2.2 | -2.2 | 1.1 | 2.4 | 2.4 | -2.3 | 2.2 | 2.2 | -2.2 | 1.7 | -2.4 | 1.7 | 2.0 |
Liver sodium concentration | 0.7 | 0.7 | 2.1 | 0.7 | -0.7 | 0.8 | -0.8 | 0.7 | -0.7 | 0.7 | -0.7 | 1.0 | 1.2 | 1.4 | -1.1 | 0.7 | 0.7 | -0.7 | 0.6 | -1.3 | 0.6 | 0.5 |
Liver manganese concentration | 2.2 | 2.5 | 3.4 | 1.6 | -1.5 | 1.6 | -1.6 | 1.6 | -1.6 | 1.5 | -1.5 | 0.9 | 1.8 | 1.8 | -1.8 | 1.6 | 1.6 | -1.6 | 1.4 | -1.8 | 1.4 | 1.3 |
For each tested trait, stats based on TWAS chi2 (squared Z-score) for the above models are shown. Avg chi2 ratio is the mean chi2 across all models for this gene, divided by the mean chi2 across all models for all genes. Avg chi2 is the mean chi2 across all models for this gene. Max chi2 is the highest chi2 across all models for this gene.
The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.