Dus1l

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Brain gene expression ENSRNOG00000047905 0.06 0.04 4.9e-04 0.01 0.03 0.03 0.02 4.3e-02 1.8e-03 1.6e-03 1.2e-02
2 Liver gene expression ENSRNOG00000047905 0.07 0.04 4.3e-07 0.02 0.04 0.04 0.04 9.7e-04 2.0e-05 1.8e-05 4.9e-05
3 OFC intron excision ratio chr10:106060160:106060478 0.13 0.09 6.8e-03 0.01 0.01 -0.01 0.02 2.1e-01 1.8e-01 5.3e-01 1.2e-01

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
BMI with tail0.51.52.2-1.5-0.9-1.2
BMI without tail6.213.121.5-2.3-4.6-3.5
Body weight2.29.216.2-0.7-3.3-4.0
Epididymis fat weight0.71.62.4-0.8-1.5-1.4
Glucose5.17.811.13.23.31.5
Heart weight0.20.30.80.2-0.3-0.9
Left kidney weight0.00.10.30.10.6-0.1
Right kidney weight0.10.30.5-0.50.70.2
Tail length5.316.128.2-0.8-5.3-4.4
Length with tail1.45.39.40.6-2.5-3.1
Length without tail1.43.16.11.72.50.7
Liver weight, left0.71.22.31.51.10.3
Liver weight, right0.91.42.50.1-1.3-1.6
Parametrial fat weight1.22.43.50.4-1.9-1.9
Retroperitoneal fat weight3.09.814.70.3-3.8-3.8
Intraocular pressure1.01.42.5-0.4-1.6-1.2
Extensor digitorum longus weight0.51.94.3-2.1-1.1-0.1
Soleus weight1.02.94.7-0.1-2.2-2.0
Tibialis anterior weight0.20.60.9-0.9-0.9-0.2
Tibia length5.214.629.62.0-3.2-5.4
Number of licking bursts0.30.40.6-0.8-0.6-0.2
Food consumed during 24 hour testing period0.40.40.90.1-0.9-0.6
Times rat made contact with spout2.22.55.22.3-0.9-1.3
Mean time between licks in bursts1.11.62.6-0.71.31.6
Mean num. licks in bursts1.01.23.21.8-0.1-0.6
Std. dev. time between licks in bursts2.73.26.9-2.6-1.6-0.4
Water consumed over 24 hours0.50.61.61.30.50.2
Indifference point 0 sec0.00.10.10.2-0.3-0.2
Indifference point AUC0.10.10.2-0.0-0.5-0.2
Indifference point function ln k0.91.31.5-0.91.21.2
Indifference point function log k0.91.31.5-0.91.21.2
Delay discounting total patch changes 0 sec0.00.10.10.0-0.3-0.2
Delay discounting total patch changes 12 sec0.10.20.30.6-0.2-0.3
Delay discounting total patch changes 18 sec0.10.20.4-0.6-0.30.2
Delay discounting total patch changes 24 sec0.30.30.60.1-0.7-0.8
Delay discounting total patch changes 6 sec0.30.50.70.7-0.6-0.8
Delay discounting time to switch 0 sec0.30.50.80.20.90.9
Delay discounting water rate 0 sec1.82.94.4-0.5-2.1-2.0
Delay discounting water rate 12 sec0.60.91.9-1.4-0.6-0.6
Delay discounting water rate 18 sec1.01.42.5-1.6-1.0-0.7
Delay discounting water rate 24 sec2.12.93.3-1.7-1.8-1.6
Delay discounting water rate 6 sec0.40.61.8-1.3-0.2-0.4
Locomotor activity0.60.91.50.01.21.1
Locomotor testing distance0.91.42.2-0.61.31.5
Locomotor testing rearing0.20.30.7-0.40.40.8
Light reinforcement 10.91.72.9-1.0-1.7-1.0
Light reinforcement 21.21.62.6-0.6-1.6-1.4
Reaction time number correct3.04.310.9-3.3-1.40.2
Reaction time mean minus median0.50.71.61.30.60.4
Reaction time mean minus median AUC0.10.10.30.50.10.1
Reaction time num false alarms0.10.20.30.10.50.6
Reaction time num false alarms AUC0.30.50.9-0.30.71.0
Reaction time trials correct on left3.04.310.9-3.3-1.40.2
Reaction time trials on left3.24.511.3-3.4-1.40.2
Reaction time mean0.10.20.40.1-0.6-0.4
Reaction time mean AUC0.20.30.5-0.5-0.7-0.2
Median of all reaction times0.20.30.6-0.4-0.8-0.5
Reaction time omissions0.10.20.3-0.6-0.50.1
Reaction time false alarm rate1.01.52.11.51.30.8
Reaction time premature initiation rate0.60.81.3-0.21.01.2
Reaction time premature initiations1.21.63.8-1.90.11.1
Std. dev. reaction times0.20.30.60.20.50.8
Reaction time trials completed3.24.511.3-3.4-1.40.2
Reaction time trials AUC3.14.411.1-3.3-1.50.1
Social response proportion0.50.50.7-0.80.50.7
Social responses0.40.50.8-0.90.40.6
Social time0.30.40.9-0.90.50.5
Conditioned locomotion3.84.67.8-0.8-2.8-2.3
Cocaine response after cond. corrected0.20.20.30.60.50.0
Cocaine response after cond. not corrected0.30.30.70.30.80.5
Cocaine response before conditioning0.80.91.3-1.00.61.2
Saline control response2.33.14.70.1-2.2-2.1
Condit. Reinf. active minus inactive responses0.91.11.9-0.3-1.1-1.4
Condit. Reinf. active-inactive response ratio1.81.93.80.6-1.3-1.9
Condit. Reinf. active responses0.40.60.7-0.6-0.8-0.8
Condit. Reinf. inactive responses0.30.40.5-0.70.40.7
Condit. Reinf. lever presses0.40.50.7-0.8-0.8-0.5
Condit. Reinf. lever reinforcers received0.50.70.8-0.8-0.9-0.8
Pavlov. Cond. lever latency0.81.01.70.91.30.7
Pavlov. Cond. magazine entry latency1.51.72.5-1.50.61.6
Pavlov. Cond. change in total contacts0.30.41.1-1.0-0.10.5
Pavlov. Cond. index score0.30.41.0-1.0-0.20.4
Pavlov. Cond. latency score0.40.61.4-1.2-0.40.4
Pavlov. Cond. lever contacts1.11.52.7-1.0-1.6-0.9
Pavlov. Cond. magazine entry number1.21.52.41.5-0.5-1.4
Pavlov. Cond. intertrial magazine entries1.62.03.30.0-1.7-1.8
Pavlov. Cond. lever-magazine prob. diff.0.40.51.1-1.0-0.10.6
Pavlov. Cond. response bias0.40.61.1-1.1-0.8-0.2
Conditioned reinforcement - actives0.30.30.7-0.8-0.30.1
Conditioned reinforcement - inactives0.91.11.90.4-1.0-1.4
Conditioned locomotion0.00.00.0-0.2-0.2-0.0
Intermittent access intake day 1-15 change1.01.01.60.6-1.3-1.1
Intermittent access intake escalation0.90.91.80.3-1.3-0.9
Intermittent access intake escalation 21.71.72.11.5-0.9-1.4
Intermitt. access day 1 inactive lever presses0.70.81.50.7-0.7-1.2
Intermitt. access day 15 inactive lever presses0.91.01.6-0.5-1.3-1.0
Intermitt. access escalation Index1.31.22.0-1.0-1.4-0.7
Intermittent access day 1 total infusions0.40.50.7-0.2-0.8-0.8
Intermittent access day 15 total infusions0.91.01.9-0.1-1.4-1.0
Intermittent access terminal intake (last 3 days)1.21.32.10.3-1.4-1.3
Intermittent access total infusions0.70.81.4-0.2-1.2-1.0
Intermittent access day 1 locomotion0.50.50.6-0.8-0.7-0.6
Intermittent access day 15 total locomotion0.40.50.70.3-0.8-0.8
Intermittent access total locomotion0.40.40.6-0.2-0.8-0.8
Intermittent access standard deviation1.11.21.81.31.30.4
Cocaine induced anxiety3.23.65.42.3-0.6-2.3
Post-drug Anxiety0.70.81.71.30.3-0.8
Baseline Anxiety4.64.98.2-1.52.02.9
Lifetime Intake0.20.30.5-0.2-0.7-0.5
Incentive Sensitization - Responses0.40.40.70.1-0.8-0.7
Incentive Sensitization - Breakpoint0.30.30.50.2-0.7-0.6
Progressive ratio test 1 active lever presses1.21.22.4-0.1-1.5-1.1
Progressive ratio test 1 breakpoint1.51.52.80.0-1.7-1.3
Progressive ratio test 1 inactive lever presses1.92.13.4-0.4-1.8-1.6
Progressive ratio test 2 active lever presses0.50.61.00.1-1.0-0.8
Progressive ratio test 2 breakpoint0.70.81.5-0.2-1.2-0.9
Progressive ratio test 2 inactive lever presses0.30.30.70.3-0.5-0.8
Total sessions with >9 infusions0.20.20.3-0.60.20.5
Short access day 1 total inactive lever presses0.60.71.9-1.4-0.30.2
Short access day 10 total inactive lever presses2.52.85.50.3-1.7-2.3
Short access day 1 total infusions1.41.52.4-0.21.41.5
Short access day 10 total infusions0.60.70.90.6-0.9-1.0
Short access total infusions0.00.00.00.0-0.2-0.0
Short access day 1 locomotion0.60.61.10.41.00.7
Short access day 10 total locomotion0.40.50.80.80.90.2
Short access total locomotion0.40.40.80.30.90.6
Compulsive drug intake0.20.20.3-0.2-0.5-0.5
One hour access (0.3 mA shock)1.51.73.1-0.2-1.7-1.4
One hour access (shock baseline)0.40.51.0-0.5-1.0-0.5
Number of responses in last shaping day0.40.40.5-0.5-0.6-0.7
Context. condit. distance diff. score1.51.93.0-1.7-1.5-0.6
Locomotion velocity, session 12.42.64.21.42.01.3
Locomotion distance, session 12.22.93.8-1.81.32.0
Locomotion velocity, session 23.33.96.0-0.22.42.4
Locomotion distance, session 20.81.12.8-1.70.20.7
Locomotion velocity, session 31.82.13.70.51.91.5
Locomotion distance, session 32.72.94.2-0.52.12.1
Stereotopy head waving bouts, day 30.70.81.40.61.20.8
Stereotopy head waving duration, day 30.30.40.80.10.90.7
Locomotion velocity, session 70.60.71.2-0.40.91.1
Locomotion distance, session 72.33.04.2-1.91.12.0
Stereotopy head waving bouts, day 70.00.10.1-0.1-0.1-0.4
Stereotopy head waving duration, day 70.10.20.30.2-0.3-0.6
Locomotion velocity, session 81.11.43.7-1.90.10.6
Locomotion distance, session 82.74.010.0-3.2-1.4-0.0
Degree of sensitization distance1.01.01.9-0.6-1.4-0.8
Degree of sensitization stereotypy0.20.30.5-0.2-0.5-0.7
Condit. Reinf. active minus inactive responses1.82.03.0-0.1-1.7-1.7
Condit. Reinf. active-inactive response ratio0.50.61.0-0.1-0.9-1.0
Condit. Reinf. active responses3.54.36.7-0.2-2.6-2.5
Condit. Reinf. inactive responses1.31.52.6-0.0-1.6-1.4
Incentive salience index mean1.41.72.9-0.3-1.7-1.5
Condit. Reinf. lever presses0.20.30.7-0.8-0.50.2
Time in familiar zone, hab. session 10.20.20.40.60.3-0.2
Time in novel zone, hab. session 10.10.10.2-0.4-0.20.1
Total zone transitions, hab. session 10.30.40.6-0.80.50.6
Total locomotion distance, hab. session 10.30.41.1-1.1-0.40.0
Locomotion velocity, hab. session 10.30.41.1-1.1-0.40.0
Time in familiar zone, hab. session 20.20.20.3-0.40.20.6
Time in novel zone, hab. session 20.00.00.1-0.20.20.1
Total zone transitions, hab. session 21.41.84.9-2.2-0.40.4
Total locomotion distance, hab. session 21.82.45.3-2.3-1.4-0.3
Locomotion velocity, hab. session 21.92.54.8-2.2-1.6-0.6
Novel to familiar place preference ratio2.12.23.61.5-0.9-1.9
Novelty place preference2.12.23.51.5-0.9-1.9
Time in novel zone, NPP test1.61.72.91.2-0.8-1.7
Total zone transitions, NPP test1.92.77.0-2.7-0.50.9
Total locomotion distance, NPP test2.13.07.5-2.7-1.20.2
Locomotion velocity, NPP test1.52.15.0-2.2-1.2-0.1
Pavlov. Cond. lever latency1.31.74.0-2.00.11.0
Pavlov. Cond. magazine entry latency2.33.04.52.1-0.9-1.9
Pavlov. Cond. change in total contacts1.21.33.41.80.5-0.4
Pavlov. Cond. index score2.22.94.01.7-1.3-2.0
Pavlov. Cond. latency score2.02.63.82.0-0.9-1.7
Pavlov. Cond. lever contacts0.60.71.31.1-0.4-0.8
Pavlov. Cond. magazine entry number2.93.67.4-2.70.51.8
Pavlov. Cond. intertrial magazine entries0.80.91.3-1.1-1.1-0.5
Pavlov. Cond. lever-magazine prob. diff.2.32.94.21.7-1.2-2.0
Pavlov. Cond. response bias2.12.64.72.2-0.6-1.6
Bone: apparent density0.20.30.5-0.7-0.6-0.4
Bone surface0.20.30.50.2-0.7-0.5
Bone volume0.20.30.6-0.1-0.7-0.5
Bone: connectivity density0.30.51.3-1.1-0.50.2
Bone: cortical apparent density2.02.64.00.32.02.0
Bone: cortical area2.74.19.3-0.2-1.7-3.0
Bone: cortical porosity2.42.66.62.60.5-1.0
Bone: cortical porosity1.92.04.82.20.1-1.2
Bone: cortical thickness2.03.38.90.4-1.0-3.0
Bone: cortical thickness0.50.61.9-0.1-0.2-1.4
Bone: cortical tissue density2.33.04.50.42.12.1
Bone: elastic displacement0.70.81.40.6-0.7-1.2
Bone: elastic work4.25.510.32.0-1.5-3.2
Bone: endosteal estimation0.30.51.0-1.0-0.80.1
Bone: endosteal perimeter0.40.91.30.4-1.1-1.1
Bone: final force2.84.69.9-0.3-1.9-3.1
Bone: final moment3.25.211.40.0-2.0-3.4
Bone: marrow area0.20.51.0-1.0-0.70.1
Bone: maximum diameter0.61.12.3-0.3-1.0-1.5
Bone: maximum force3.25.511.4-0.5-2.2-3.4
Bone: maximum moment3.56.113.0-0.1-2.3-3.6
Bone: minimum diameter1.52.75.20.3-1.7-2.3
Bone: periosteal estimation1.12.33.8-0.6-1.6-2.0
Bone: periosteal perimeter1.62.75.31.2-1.1-2.3
Bone: post-yield work0.30.41.2-1.1-0.30.0
Bone: stiffness0.60.91.4-1.0-0.5-1.2
Bone: tissue strength1.51.41.7-1.3-1.2-1.1
Bone: trabecular number0.00.00.0-0.1-0.2-0.1
Bone: trabecular spacing1.82.45.6-2.4-1.2-0.1
Bone: trabecular thickness1.31.64.02.00.2-0.8
Bone: trabecular tissue density0.50.81.2-0.11.11.1
Breakpoint value in progressive ratio session0.50.61.31.20.3-0.6
Distance traveled before self-admin1.11.22.51.6-0.1-1.1
Distance traveled after self-admin0.70.71.6-0.2-1.3-0.7
Delta time in closed arm before/after self-admin0.20.20.5-0.7-0.10.3
Delta time in open arm before/after self-admin0.00.00.0-0.00.10.1
Diff in mean of infusions in LGA sessions0.40.50.70.60.80.7
Extinction: sum of active levers before priming2.32.44.20.72.11.5
Active lever presses in extinction session 61.51.42.71.11.60.6
Delta distance traveled before/after self-admin0.70.71.6-1.3-0.50.6
Delta ambulatory time before/after self-admin0.91.01.7-1.3-0.11.1
Time in closed arm before self-admin0.40.40.90.90.7-0.0
Time in closed arm after self-admin1.11.11.61.31.30.4
Time in open arm before self-admin0.30.30.7-0.80.00.5
Time in open arm after self-admin0.30.40.7-0.90.10.6
Sum of active levers in priming session hrs 5-60.80.81.51.2-0.1-0.9
Time to tail flick, vehicle, before self-admin0.10.10.3-0.2-0.6-0.2
Time to tail flick, vehicle, after self-admin1.81.92.8-0.71.61.7
Time to tail flick, test, before self-admin0.30.30.40.2-0.6-0.6
Time to tail flick, test, after self-admin0.30.40.6-0.00.70.7
Delta time to tail flick, vehicle, before/after SA0.50.50.9-0.90.40.7
Delta time to tail flick, test, before/after SA1.31.12.30.41.50.9
Ambulatory time before self-admin1.51.62.31.4-0.6-1.5
Ambulatory time after self-admin0.20.30.60.0-0.7-0.5
Total heroin consumption0.91.12.11.21.40.1
Area under the delay curve1.11.11.9-0.31.21.4
Delay disc. indifference point, 0s delay0.10.20.3-0.30.50.4
Delay disc. indifference point, 16s delay1.71.72.3-1.50.71.5
Delay disc. indifference point, 2s delay0.30.30.50.10.70.7
Delay disc. indifference point, 24s delay4.24.16.50.42.52.4
Delay disc. indifference point, 4s delay0.30.30.5-0.20.70.6
Delay disc. indifference point, 8s delay0.70.71.30.51.20.8
Delay discount exponential model param1.51.62.40.1-1.5-1.6
Delay discount hyperbolic model param1.41.52.40.1-1.5-1.5
Fecal boli incidents, locomotor time 10.40.51.0-0.50.41.0
Change in fecal boli incidents, locomotor task2.01.93.01.41.70.9
Time >=10cm from walls, locomotor time 11.61.62.7-1.3-1.6-0.6
Bouts of movement, locomotor time 11.31.52.40.21.51.4
Total resting periods, locomotor time 11.61.83.00.41.71.5
Rest time, locomotor task time 10.40.40.60.80.70.3
Distance moved, locomotor task time 10.40.50.7-0.5-0.9-0.7
Vertical activity count, locomotor time 11.01.01.4-1.0-1.2-0.8
Time >=10cm from walls, locomotor time 20.20.20.5-0.7-0.2-0.2
Bouts of movement, locomotor time 20.70.70.9-0.60.90.9
Total resting periods, locomotor time 20.50.60.9-0.90.50.8
Rest time, locomotor task time 20.00.00.00.2-0.20.2
Distance moved, locomotor task time 20.10.10.2-0.50.3-0.1
Vertical activity count, locomotor time 20.70.72.2-1.5-0.2-0.2
Weight adjusted by age1.21.32.50.7-1.0-1.6
Seeking ratio, delayed vs. immediate footshock1.11.21.8-0.3-1.4-1.3
Locomotion in novel chamber0.20.20.4-0.30.40.6
Locomotion in novel chamber post-restriction2.42.94.50.2-2.1-2.0
Progressive ratio0.30.40.6-0.10.70.7
Food seeking constrained by brief footshock0.40.51.01.00.60.4
Seeking ratio, punishment vs. effort0.10.20.40.0-0.6-0.4
Run reversals in cocaine runway, females0.50.50.8-0.90.20.9
Run reversals in cocaine runway, males1.51.42.81.7-0.5-1.1
Latency to leave start box in cocaine runway0.20.20.4-0.6-0.00.4
Latency to leave start box in cocaine runway, F0.90.92.3-1.5-0.20.7
Latency to leave start box in cocaine runway, M0.20.20.30.5-0.4-0.6
Cd content in liver1.31.42.0-0.81.21.4
Co content in liver0.10.20.4-0.20.30.6
Cu content in liver0.50.71.81.30.2-0.5
Fe content in liver0.70.91.7-0.40.91.3
K content in liver2.02.03.6-1.0-1.9-1.2
Mg content in liver1.81.83.6-1.9-1.3-0.1
Mn content in liver0.10.10.40.1-0.3-0.6
Na content in liver0.00.00.00.20.10.1
Rb content in liver1.21.62.1-1.2-1.4-1.1
Se content in liver0.40.40.90.1-1.0-0.6
Sr content in liver1.91.74.22.01.00.1
Zn content in liver0.00.00.0-0.1-0.10.2