# | tissue | modality | RNA phenotype | h2 | h2 se | h2 P | eQTL R2 | BLUP R2 | ENET R2 | LASSO R2 | eQTL P | BLUP P | ENET P | LASSO P |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Adipose | gene expression | ENSRNOG00000020577 | 0.036 | 0.0270 | 2.0e-04 | 0.034 | 0.026 | 0.022 | 0.031 | 1.1e-04 | 6.0e-04 | 1.4e-03 | 2.0e-04 |
2 | BLA | mRNA stability | ENSRNOG00000020577 | 0.160 | 0.1000 | 2.0e-08 | 0.132 | 0.155 | 0.131 | 0.129 | 1.6e-07 | 1.1e-08 | 1.7e-07 | 2.3e-07 |
3 | Brain | alternative polyA | ENSRNOT00000107025 | 0.130 | 0.0810 | 2.9e-11 | 0.098 | 0.105 | 0.090 | 0.093 | 2.4e-09 | 5.9e-10 | 1.1e-08 | 5.8e-09 |
4 | Brain | gene expression | ENSRNOG00000020577 | 0.180 | 0.1200 | 1.8e-05 | 0.059 | 0.062 | 0.050 | 0.056 | 3.8e-06 | 2.2e-06 | 1.8e-05 | 5.8e-06 |
5 | Brain | mRNA stability | ENSRNOG00000020577 | 0.177 | 0.1026 | 5.6e-17 | 0.123 | 0.161 | 0.142 | 0.149 | 1.8e-11 | 9.8e-15 | 4.6e-13 | 9.8e-14 |
6 | Eye | isoform ratio | ENSRNOT00000061159 | 0.248 | 0.1890 | 8.3e-03 | 0.039 | 0.063 | -0.006 | 0.037 | 8.5e-02 | 4.0e-02 | 4.2e-01 | 9.2e-02 |
7 | IL | gene expression | ENSRNOG00000020577 | 0.177 | 0.1230 | 1.6e-03 | 0.033 | 0.027 | 0.031 | 0.032 | 5.6e-02 | 7.6e-02 | 6.1e-02 | 5.8e-02 |
8 | IL | isoform ratio | ENSRNOT00000061159 | 0.158 | 0.1170 | 2.8e-03 | 0.014 | 0.033 | 0.000 | 0.019 | 1.5e-01 | 5.6e-02 | 3.2e-01 | 1.1e-01 |
9 | IL | mRNA stability | ENSRNOG00000020577 | 0.505 | 0.2080 | 5.2e-09 | 0.202 | 0.194 | 0.262 | 0.270 | 1.4e-05 | 2.0e-05 | 5.4e-07 | 3.4e-07 |
10 | LHb | gene expression | ENSRNOG00000020577 | 0.176 | 0.1197 | 8.6e-04 | 0.087 | 0.022 | 0.027 | 0.068 | 4.4e-03 | 9.6e-02 | 7.6e-02 | 1.1e-02 |
11 | NAcc | gene expression | ENSRNOG00000020577 | 0.288 | 0.1590 | 2.5e-05 | 0.086 | 0.094 | 0.069 | 0.065 | 5.7e-03 | 4.0e-03 | 1.2e-02 | 1.5e-02 |
12 | NAcc | mRNA stability | ENSRNOG00000020577 | 0.161 | 0.1140 | 1.6e-03 | 0.175 | 0.112 | 0.170 | 0.156 | 1.0e-04 | 1.8e-03 | 1.2e-04 | 2.5e-04 |
13 | NAcc2 | mRNA stability | ENSRNOG00000020577 | 0.107 | 0.0752 | 1.6e-05 | 0.062 | 0.059 | 0.058 | 0.054 | 3.0e-04 | 3.9e-04 | 4.4e-04 | 6.8e-04 |
14 | OFC | mRNA stability | ENSRNOG00000020577 | 0.359 | 0.1805 | 8.0e-09 | 0.228 | 0.298 | 0.272 | 0.275 | 4.0e-06 | 8.2e-08 | 3.5e-07 | 3.1e-07 |
15 | PL | mRNA stability | ENSRNOG00000020577 | 0.535 | 0.1870 | 2.1e-10 | 0.368 | 0.357 | 0.344 | 0.336 | 1.2e-09 | 2.4e-09 | 5.3e-09 | 8.3e-09 |
16 | PL2 | mRNA stability | ENSRNOG00000020577 | 0.311 | 0.1804 | 3.2e-15 | 0.166 | 0.227 | 0.206 | 0.220 | 2.3e-09 | 1.5e-12 | 2.0e-11 | 3.7e-12 |
All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, the gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method.
Trait | Avg chi2 ratio | Avg chi2 | Max chi2 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
dissection: UMAP 1 of all traits | 0.6 | 2.1 | 2.5 | 1.5 | -1.5 | 1.5 | 0.1 | -1.5 | 1.5 | 1.5 | -1.5 | -1.6 | 1.4 | 1.5 | -1.4 | -1.6 | -1.5 | -1.5 | -1.5 |
retroperitoneal_fat_g | 0.5 | 1.7 | 3.0 | -1.0 | 1.4 | -1.4 | 0.5 | 1.4 | -1.3 | -1.1 | 1.1 | 1.5 | -1.2 | -1.4 | 1.2 | 1.7 | 1.2 | 1.7 | 1.4 |
body_g | 1.1 | 4.8 | 5.6 | -2.2 | 2.3 | -2.3 | -0.1 | 2.3 | -2.3 | -2.2 | 2.2 | 2.4 | -2.2 | -2.3 | 2.2 | 2.3 | 2.3 | 2.3 | 2.3 |
dissection: UMAP 3 of all traits | 2.6 | 7.3 | 9.4 | -2.3 | 2.9 | -2.9 | 0.8 | 2.9 | -2.7 | -2.3 | 2.3 | 2.8 | -3.1 | -2.8 | 3.1 | 3.0 | 2.5 | 3.0 | 2.8 |
kidney_right_g | 1.5 | 4.2 | 5.2 | 2.0 | -2.2 | 2.2 | -0.1 | -2.2 | 2.2 | 2.0 | -2.0 | -2.2 | 2.0 | 2.2 | -2.0 | -2.3 | -2.1 | -2.3 | -2.2 |
dissection: PC 3 of all traits | 3.2 | 7.9 | 9.8 | -3.1 | 2.8 | -2.7 | -1.2 | 2.9 | -3.0 | -3.1 | 3.1 | 3.0 | -2.5 | -2.9 | 2.5 | 2.7 | 3.1 | 2.7 | 2.9 |
dissection: PC 2 of all traits | 5.6 | 14.2 | 17.6 | 3.4 | -4.0 | 4.0 | -0.7 | -4.0 | 3.9 | 3.4 | -3.4 | -3.9 | 4.2 | 4.0 | -4.2 | -4.1 | -3.7 | -4.1 | -4.0 |
glucose_mg_dl | 1.2 | 1.8 | 2.0 | -1.3 | 1.4 | -1.4 | -0.0 | 1.4 | -1.4 | -1.3 | 1.3 | 1.4 | -1.4 | -1.4 | 1.4 | 1.4 | 1.4 | 1.4 | 1.4 |
heart_g | 0.3 | 0.4 | 0.9 | 0.8 | -0.5 | 0.4 | 1.0 | -0.5 | 0.6 | 0.9 | -0.8 | -0.6 | 0.2 | 0.5 | -0.2 | -0.4 | -0.7 | -0.4 | -0.6 |
os_mean | 0.1 | 0.2 | 1.2 | 0.5 | -0.0 | -0.0 | 1.1 | -0.1 | 0.3 | 0.5 | -0.5 | -0.2 | -0.3 | 0.2 | 0.3 | -0.1 | -0.4 | -0.1 | -0.2 |
EDL weight in grams | 4.7 | 18.8 | 22.1 | -3.9 | 4.7 | -4.7 | 0.8 | 4.6 | -4.5 | -3.9 | 4.0 | 4.6 | -4.7 | -4.6 | 4.7 | 4.6 | 4.3 | 4.7 | 4.6 |
Tibia length in mm | 0.8 | 2.2 | 2.9 | 1.7 | -1.5 | 1.5 | 0.7 | -1.5 | 1.6 | 1.7 | -1.7 | -1.5 | 1.4 | 1.6 | -1.4 | -1.3 | -1.7 | -1.3 | -1.6 |
sol weight in grams | 8.6 | 25.0 | 28.3 | -5.2 | 5.2 | -5.1 | -0.9 | 5.2 | -5.3 | -5.2 | 5.2 | 5.3 | -5.0 | -5.3 | 5.0 | 4.9 | 5.3 | 4.9 | 5.3 |
TA weight in grams | 0.9 | 3.1 | 3.7 | -1.9 | 1.8 | -1.8 | -0.4 | 1.8 | -1.9 | -1.9 | 1.9 | 1.9 | -1.8 | -1.9 | 1.8 | 1.6 | 1.9 | 1.7 | 1.8 |
Average time between licks in bursts | 3.5 | 5.0 | 6.5 | 2.6 | -2.2 | 2.1 | 1.2 | -2.2 | 2.4 | 2.5 | -2.5 | -2.3 | 2.1 | 2.3 | -2.1 | -2.0 | -2.5 | -2.0 | -2.3 |
Std. dev. time between licks in bursts | 1.1 | 1.3 | 2.0 | 0.8 | -1.3 | 1.3 | -0.9 | -1.2 | 1.1 | 0.8 | -0.8 | -1.2 | 1.4 | 1.2 | -1.4 | -1.3 | -0.9 | -1.3 | -1.2 |
Number of licking bursts | 0.3 | 0.4 | 1.9 | 0.2 | 0.6 | -0.6 | 1.4 | 0.5 | -0.3 | 0.1 | -0.1 | 0.5 | -0.6 | -0.4 | 0.6 | 0.8 | 0.1 | 0.8 | 0.4 |
Food consumed during 24 hour testing period | 0.5 | 0.6 | 0.6 | -0.7 | 0.8 | -0.8 | -0.1 | 0.8 | -0.8 | -0.7 | 0.7 | 0.8 | -0.8 | -0.8 | 0.8 | 0.8 | 0.8 | 0.8 | 0.8 |
Water consumed over 24 hour session | 0.4 | 0.5 | 1.7 | -1.0 | 0.4 | -0.4 | -1.3 | 0.5 | -0.7 | -1.0 | 1.0 | 0.6 | -0.3 | -0.6 | 0.3 | 0.3 | 0.8 | 0.3 | 0.6 |
Times rat made contact with spout | 0.3 | 0.4 | 0.6 | -0.3 | 0.7 | -0.7 | 0.8 | 0.6 | -0.5 | -0.3 | 0.3 | 0.6 | -0.8 | -0.6 | 0.8 | 0.7 | 0.4 | 0.7 | 0.6 |
Average drop size | 0.3 | 0.4 | 0.6 | -0.7 | 0.6 | -0.6 | -0.4 | 0.6 | -0.7 | -0.8 | 0.8 | 0.7 | -0.5 | -0.7 | 0.5 | 0.6 | 0.7 | 0.6 | 0.7 |
light_reinforcement_lr_relactive | 1.7 | 2.3 | 2.8 | 1.5 | -1.6 | 1.6 | 0.1 | -1.6 | 1.6 | 1.5 | -1.5 | -1.5 | 1.7 | 1.6 | -1.7 | -1.4 | -1.6 | -1.5 | -1.6 |
light_reinforcement_lr_active | 5.5 | 10.1 | 11.4 | 3.1 | -3.3 | 3.3 | 0.3 | -3.3 | 3.3 | 3.2 | -3.2 | -3.3 | 3.4 | 3.3 | -3.4 | -3.2 | -3.3 | -3.2 | -3.4 |
Delay discounting water rate 0 sec | 0.2 | 0.3 | 2.7 | 0.7 | 0.2 | -0.3 | 1.6 | 0.1 | 0.1 | 0.5 | -0.5 | 0.1 | -0.4 | -0.1 | 0.4 | 0.5 | -0.3 | 0.4 | 0.0 |
Median of all reaction times | 0.2 | 0.3 | 1.8 | -0.7 | 0.2 | -0.1 | -1.3 | 0.3 | -0.5 | -0.8 | 0.8 | 0.3 | -0.0 | -0.3 | 0.0 | 0.1 | 0.6 | 0.0 | 0.4 |
locomotor_testing_activity | 3.9 | 6.2 | 8.8 | 2.1 | -2.7 | 2.7 | -0.9 | -2.6 | 2.5 | 2.1 | -2.1 | -2.6 | 3.0 | 2.6 | -3.0 | -2.7 | -2.3 | -2.7 | -2.6 |
reaction_time_corr | 0.8 | 1.2 | 2.0 | -0.5 | 1.2 | -1.2 | 1.2 | 1.1 | -0.9 | -0.6 | 0.6 | 1.1 | -1.4 | -1.1 | 1.4 | 1.3 | 0.8 | 1.3 | 1.1 |
reaction_time_leftcorr | 0.8 | 1.2 | 2.0 | -0.5 | 1.2 | -1.2 | 1.2 | 1.1 | -0.9 | -0.6 | 0.6 | 1.1 | -1.4 | -1.1 | 1.4 | 1.3 | 0.8 | 1.3 | 1.1 |
delay_discounting_pc1800 | 0.9 | 1.2 | 1.5 | 1.2 | -1.1 | 1.1 | 0.3 | -1.1 | 1.2 | 1.2 | -1.2 | -1.1 | 1.1 | 1.2 | -1.1 | -1.1 | -1.2 | -1.0 | -1.2 |
reaction_time_falsealarm | 0.1 | 0.1 | 0.3 | -0.0 | 0.3 | -0.3 | 0.5 | 0.3 | -0.2 | -0.1 | 0.1 | 0.3 | -0.4 | -0.3 | 0.4 | 0.3 | 0.1 | 0.4 | 0.3 |
social_reinforcement_socialrfq | 0.7 | 0.7 | 1.2 | 0.6 | -0.9 | 0.9 | -0.4 | -0.9 | 0.8 | 0.7 | -0.7 | -1.0 | 0.9 | 0.9 | -0.9 | -1.1 | -0.8 | -1.1 | -0.9 |
reaction_time_pinit | 0.4 | 0.6 | 3.9 | 1.3 | -0.2 | 0.2 | 2.0 | -0.3 | 0.6 | 1.1 | -1.1 | -0.4 | 0.1 | 0.4 | -0.1 | 0.0 | -0.9 | 0.1 | -0.4 |
reaction_time_pinit_slope | 0.2 | 0.2 | 1.5 | -0.8 | 0.1 | -0.1 | -1.2 | 0.2 | -0.4 | -0.6 | 0.7 | 0.3 | 0.1 | -0.2 | -0.1 | -0.0 | 0.5 | -0.0 | 0.2 |
reaction_time_peropfalsealarm_slope | 2.1 | 2.5 | 2.8 | 1.6 | -1.7 | 1.7 | -0.1 | -1.7 | 1.7 | 1.5 | -1.6 | -1.7 | 1.7 | 1.7 | -1.7 | -1.6 | -1.6 | -1.6 | -1.7 |
soc_socialavgti | 4.5 | 6.1 | 7.3 | -2.7 | 2.5 | -2.4 | -0.8 | 2.5 | -2.6 | -2.7 | 2.7 | 2.6 | -2.2 | -2.6 | 2.2 | 2.5 | 2.7 | 2.5 | 2.6 |
reaction_time_peropinit_slope | 2.4 | 2.6 | 3.1 | 1.5 | -1.7 | 1.7 | 0.0 | -1.7 | 1.7 | 1.6 | -1.6 | -1.6 | 1.8 | 1.7 | -1.8 | -1.6 | -1.6 | -1.6 | -1.7 |
reaction_time_meanrt_slope | 1.5 | 1.8 | 2.0 | -1.3 | 1.4 | -1.4 | -0.1 | 1.4 | -1.4 | -1.3 | 1.3 | 1.4 | -1.4 | -1.4 | 1.4 | 1.4 | 1.4 | 1.4 | 1.4 |
reaction_time_devmedrt_slope | 4.1 | 4.2 | 4.9 | -2.2 | 2.1 | -2.1 | -0.3 | 2.1 | -2.2 | -2.1 | 2.1 | 2.2 | -2.0 | -2.1 | 2.0 | 2.2 | 2.2 | 2.1 | 2.1 |
pavca_ny_levercs_d4d5 | 0.7 | 1.0 | 1.3 | 1.1 | -1.0 | 1.0 | 0.4 | -1.0 | 1.1 | 1.1 | -1.1 | -1.1 | 0.9 | 1.0 | -0.9 | -1.0 | -1.1 | -1.0 | -1.1 |
pavca_ny_d2_magazine_cs | 0.2 | 0.2 | 1.7 | 0.6 | 0.1 | -0.1 | 1.3 | -0.0 | 0.2 | 0.5 | -0.5 | -0.1 | -0.2 | 0.1 | 0.2 | 0.2 | -0.4 | 0.2 | -0.1 |
ccp_trial_3_saline_dist_mm | 0.2 | 0.2 | 0.3 | -0.4 | 0.5 | -0.5 | 0.0 | 0.5 | -0.5 | -0.4 | 0.4 | 0.5 | -0.5 | -0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 |
pavca_ny_d5_magazine_ncs | 0.3 | 0.4 | 0.6 | -0.5 | 0.7 | -0.7 | 0.1 | 0.7 | -0.7 | -0.6 | 0.6 | 0.7 | -0.6 | -0.7 | 0.6 | 0.8 | 0.6 | 0.8 | 0.7 |
ccp_change_in_locomotor_activity | 2.3 | 2.7 | 3.9 | -1.1 | 1.8 | -1.9 | 1.2 | 1.7 | -1.5 | -1.1 | 1.1 | 1.7 | -2.0 | -1.7 | 2.0 | 2.0 | 1.3 | 2.0 | 1.7 |
Conditioned locomotion | 7.8 | 9.4 | 10.7 | 3.2 | -3.1 | 3.1 | 0.7 | -3.2 | 3.3 | 3.2 | -3.2 | -3.2 | 3.0 | 3.2 | -3.0 | -3.0 | -3.3 | -3.0 | -3.2 |
Total sessions with >9 infusions | 0.1 | 0.1 | 0.9 | -0.1 | -0.3 | 0.4 | -0.9 | -0.3 | 0.2 | -0.1 | 0.1 | -0.3 | 0.3 | 0.3 | -0.3 | -0.5 | -0.0 | -0.5 | -0.2 |
Velocity during novelty place preference test | 0.2 | 0.3 | 1.8 | -0.2 | -0.5 | 0.6 | -1.3 | -0.4 | 0.2 | -0.1 | 0.1 | -0.4 | 0.6 | 0.4 | -0.6 | -0.7 | -0.0 | -0.7 | -0.4 |
crf_mi_active_responses | 3.9 | 4.8 | 5.9 | 1.9 | -2.4 | 2.4 | -0.6 | -2.3 | 2.2 | 1.9 | -1.9 | -2.3 | 2.4 | 2.3 | -2.4 | -2.4 | -2.1 | -2.4 | -2.3 |
pavca_mi_d1_avg_mag_lat | 3.4 | 4.1 | 5.0 | 1.8 | -2.2 | 2.2 | -0.6 | -2.2 | 2.1 | 1.8 | -1.8 | -2.1 | 2.2 | 2.1 | -2.2 | -2.2 | -1.9 | -2.2 | -2.1 |
pavca_mi_d3_magazine_ncs | 3.1 | 3.2 | 4.0 | -1.5 | 1.9 | -2.0 | 0.7 | 1.9 | -1.8 | -1.5 | 1.5 | 1.9 | -2.0 | -1.9 | 2.0 | 2.0 | 1.6 | 2.0 | 1.9 |
pavca_mi_d1_prob_lev | 0.2 | 0.3 | 2.1 | -0.8 | 0.2 | -0.1 | -1.4 | 0.3 | -0.5 | -0.8 | 0.8 | 0.3 | 0.0 | -0.3 | -0.0 | 0.0 | 0.7 | 0.0 | 0.3 |
pavca_mi_d1_avg_lev_lat | 1.0 | 1.5 | 2.6 | 1.6 | -1.0 | 0.9 | 1.6 | -1.1 | 1.3 | 1.6 | -1.6 | -1.1 | 0.8 | 1.1 | -0.8 | -0.8 | -1.5 | -0.8 | -1.1 |
pavca_mi_d3_prob_mag | 1.6 | 2.0 | 2.4 | -1.6 | 1.4 | -1.4 | -0.5 | 1.5 | -1.5 | -1.6 | 1.6 | 1.5 | -1.3 | -1.5 | 1.3 | 1.4 | 1.6 | 1.4 | 1.5 |
Total cortical area | 0.1 | 0.2 | 0.3 | -0.4 | 0.5 | -0.5 | 0.1 | 0.5 | -0.5 | -0.4 | 0.4 | 0.5 | -0.5 | -0.5 | 0.5 | 0.6 | 0.5 | 0.5 | 0.5 |
tb_th_sd | 2.4 | 2.9 | 6.4 | 0.5 | -1.9 | 2.0 | -2.5 | -1.7 | 1.3 | 0.6 | -0.6 | -1.6 | 2.2 | 1.6 | -2.2 | -2.2 | -1.0 | -2.2 | -1.6 |
Cortical porosity | 0.7 | 0.7 | 1.0 | 0.6 | -0.9 | 1.0 | -0.5 | -0.9 | 0.8 | 0.6 | -0.6 | -0.9 | 1.0 | 0.9 | -1.0 | -1.0 | -0.7 | -1.0 | -0.9 |
length | 0.3 | 0.6 | 0.8 | 0.9 | -0.8 | 0.8 | 0.0 | -0.8 | 0.8 | 0.8 | -0.8 | -0.8 | 0.9 | 0.8 | -0.9 | -0.7 | -0.8 | -0.7 | -0.8 |
Trabecular tissue density | 2.6 | 3.6 | 5.5 | -1.4 | 2.1 | -2.1 | 0.9 | 2.0 | -1.9 | -1.5 | 1.5 | 2.0 | -2.0 | -2.0 | 2.0 | 2.3 | 1.7 | 2.3 | 2.0 |
ctth_sd | 0.3 | 0.4 | 0.6 | 0.5 | -0.7 | 0.7 | -0.4 | -0.7 | 0.6 | 0.5 | -0.5 | -0.6 | 0.8 | 0.6 | -0.8 | -0.7 | -0.5 | -0.7 | -0.6 |
tautz: manual_spc7 | 0.5 | 0.7 | 1.0 | -0.5 | 0.9 | -0.9 | 0.6 | 0.9 | -0.8 | -0.6 | 0.6 | 0.9 | -1.0 | -0.8 | 1.0 | 1.0 | 0.7 | 1.0 | 0.8 |
tautz: manual_mpc15 | 0.2 | 0.3 | 0.5 | 0.3 | -0.5 | 0.6 | -0.6 | -0.5 | 0.4 | 0.3 | -0.3 | -0.5 | 0.7 | 0.5 | -0.7 | -0.6 | -0.3 | -0.6 | -0.5 |
tautz: manual_mpc18 | 0.0 | 0.0 | 0.1 | -0.0 | 0.2 | -0.2 | 0.3 | 0.2 | -0.1 | -0.0 | 0.0 | 0.2 | -0.1 | -0.2 | 0.1 | 0.3 | 0.1 | 0.3 | 0.2 |
tautz: manual_spc15 | 0.4 | 0.5 | 1.5 | 1.1 | -0.5 | 0.5 | 1.2 | -0.6 | 0.8 | 1.0 | -1.0 | -0.6 | 0.4 | 0.6 | -0.4 | -0.2 | -0.9 | -0.2 | -0.6 |
tautz: manual_spc21 | 1.9 | 2.4 | 4.9 | -2.2 | 1.2 | -1.1 | -2.2 | 1.3 | -1.6 | -2.1 | 2.1 | 1.4 | -0.9 | -1.4 | 0.9 | 0.7 | 1.9 | 0.8 | 1.4 |
tautz: manual_spc9 | 0.2 | 0.3 | 1.2 | 0.8 | -0.3 | 0.3 | 1.1 | -0.4 | 0.6 | 0.8 | -0.8 | -0.5 | 0.2 | 0.5 | -0.2 | -0.2 | -0.7 | -0.2 | -0.5 |
tautz: manual_mpc3 | 0.5 | 0.8 | 1.0 | -0.9 | 0.9 | -0.9 | -0.2 | 0.9 | -0.9 | -0.9 | 0.9 | 0.9 | -0.8 | -0.9 | 0.8 | 1.0 | 0.9 | 1.0 | 0.9 |
tautz: manual_spc12 | 2.1 | 2.9 | 5.2 | -0.6 | 1.9 | -1.9 | 2.3 | 1.7 | -1.4 | -0.7 | 0.7 | 1.7 | -2.2 | -1.6 | 2.2 | 2.2 | 1.0 | 2.2 | 1.6 |
tautz: manual_spc14 | 2.1 | 3.1 | 4.4 | 2.1 | -1.7 | 1.7 | 1.0 | -1.8 | 1.9 | 2.1 | -2.1 | -1.8 | 1.6 | 1.8 | -1.6 | -1.4 | -2.0 | -1.4 | -1.8 |
tautz: manual_spc8 | 0.2 | 0.3 | 0.5 | 0.7 | -0.5 | 0.4 | 0.6 | -0.5 | 0.6 | 0.7 | -0.7 | -0.6 | 0.3 | 0.5 | -0.3 | -0.5 | -0.7 | -0.5 | -0.5 |
tautz: manual_mpc7 | 0.3 | 0.3 | 0.6 | -0.3 | 0.6 | -0.6 | 0.4 | 0.6 | -0.5 | -0.3 | 0.3 | 0.6 | -0.6 | -0.5 | 0.6 | 0.8 | 0.4 | 0.8 | 0.5 |
tautz: manual_mpc16 | 0.6 | 0.8 | 4.7 | -0.4 | -0.7 | 0.8 | -2.2 | -0.6 | 0.3 | -0.3 | 0.3 | -0.5 | 1.0 | 0.5 | -1.0 | -1.1 | 0.0 | -1.1 | -0.5 |
tautz: manual_mpc4 | 0.4 | 0.5 | 0.8 | -0.7 | 0.8 | -0.7 | -0.1 | 0.8 | -0.8 | -0.7 | 0.7 | 0.8 | -0.6 | -0.8 | 0.6 | 0.9 | 0.8 | 0.9 | 0.8 |
tautz: manual_mpc10 | 1.5 | 2.1 | 4.1 | -2.0 | 1.2 | -1.1 | -2.0 | 1.3 | -1.6 | -2.0 | 2.0 | 1.3 | -0.9 | -1.4 | 0.9 | 0.8 | 1.8 | 0.8 | 1.4 |
tautz: manual_mpc5 | 1.4 | 1.7 | 2.7 | 0.6 | -1.4 | 1.5 | -1.5 | -1.4 | 1.1 | 0.7 | -0.7 | -1.3 | 1.6 | 1.3 | -1.6 | -1.6 | -0.9 | -1.6 | -1.3 |
tautz: manual_spc22 | 0.1 | 0.1 | 0.4 | -0.0 | 0.3 | -0.4 | 0.6 | 0.3 | -0.2 | -0.0 | 0.0 | 0.3 | -0.4 | -0.3 | 0.4 | 0.4 | 0.1 | 0.4 | 0.3 |
tautz: manual_mpc14 | 1.0 | 1.8 | 5.2 | 0.2 | -1.4 | 1.5 | -2.3 | -1.3 | 0.9 | 0.3 | -0.3 | -1.2 | 1.8 | 1.2 | -1.8 | -1.6 | -0.6 | -1.6 | -1.2 |
tautz: manual_mpc12 | 2.3 | 3.5 | 4.4 | -1.6 | 2.0 | -2.0 | 0.6 | 2.0 | -1.9 | -1.6 | 1.6 | 2.0 | -2.0 | -2.0 | 2.0 | 2.1 | 1.8 | 2.1 | 2.0 |
tautz: manual_mcs | 0.5 | 0.6 | 0.9 | -0.6 | 0.9 | -0.9 | 0.4 | 0.9 | -0.8 | -0.6 | 0.6 | 0.8 | -0.9 | -0.8 | 0.9 | 0.8 | 0.7 | 0.9 | 0.8 |
tautz: manual_spc17 | 1.1 | 1.5 | 1.9 | 1.0 | -1.3 | 1.4 | -0.4 | -1.3 | 1.2 | 1.0 | -1.1 | -1.3 | 1.4 | 1.3 | -1.4 | -1.4 | -1.2 | -1.4 | -1.3 |
tautz: manual_spc24 | 0.3 | 0.4 | 3.2 | 0.4 | 0.5 | -0.6 | 1.8 | 0.4 | -0.1 | 0.4 | -0.4 | 0.4 | -0.7 | -0.3 | 0.7 | 0.8 | -0.1 | 0.8 | 0.3 |
tautz: manual_spc4 | 0.3 | 0.5 | 2.1 | -0.0 | -0.7 | 0.7 | -1.4 | -0.6 | 0.4 | -0.0 | 0.0 | -0.5 | 0.9 | 0.5 | -0.9 | -0.8 | -0.2 | -0.8 | -0.5 |
tautz: manual_mpc9 | 3.7 | 5.1 | 6.9 | -1.8 | 2.4 | -2.5 | 0.8 | 2.4 | -2.3 | -1.9 | 1.9 | 2.4 | -2.5 | -2.4 | 2.5 | 2.6 | 2.1 | 2.6 | 2.4 |
tautz: manual_spc2 | 1.6 | 2.1 | 3.2 | -1.0 | 1.6 | -1.6 | 1.0 | 1.5 | -1.4 | -1.0 | 1.0 | 1.5 | -1.6 | -1.5 | 1.6 | 1.8 | 1.2 | 1.8 | 1.5 |
tautz: manual_spc13 | 0.4 | 0.6 | 1.9 | 0.1 | -0.8 | 0.9 | -1.4 | -0.7 | 0.5 | 0.1 | -0.1 | -0.7 | 0.9 | 0.7 | -0.9 | -1.1 | -0.3 | -1.1 | -0.7 |
tautz: manual_mpc19 | 1.2 | 1.4 | 1.8 | 1.0 | -1.3 | 1.3 | -0.3 | -1.2 | 1.2 | 1.0 | -1.0 | -1.3 | 1.3 | 1.2 | -1.3 | -1.3 | -1.1 | -1.3 | -1.2 |
tautz: manual_spc10 | 0.0 | 0.0 | 0.1 | 0.1 | 0.1 | -0.1 | 0.2 | 0.0 | -0.0 | 0.1 | -0.1 | 0.0 | -0.2 | -0.0 | 0.2 | -0.0 | -0.0 | -0.0 | 0.0 |
tautz: manual_spc11 | 1.7 | 2.2 | 2.6 | 1.5 | -1.6 | 1.6 | 0.0 | -1.6 | 1.6 | 1.5 | -1.5 | -1.6 | 1.5 | 1.6 | -1.5 | -1.6 | -1.5 | -1.6 | -1.6 |
tautz: manual_spc23 | 0.1 | 0.2 | 0.3 | 0.2 | -0.4 | 0.4 | -0.4 | -0.4 | 0.3 | 0.2 | -0.2 | -0.4 | 0.6 | 0.4 | -0.6 | -0.4 | -0.3 | -0.4 | -0.4 |
tautz: manual_spc6 | 0.9 | 1.3 | 3.6 | -0.2 | 1.2 | -1.3 | 1.9 | 1.1 | -0.8 | -0.3 | 0.3 | 1.1 | -1.4 | -1.0 | 1.4 | 1.5 | 0.5 | 1.5 | 1.0 |
tautz: manual_spc20 | 0.2 | 0.3 | 3.1 | 0.7 | 0.2 | -0.2 | 1.8 | 0.1 | 0.2 | 0.6 | -0.6 | 0.0 | -0.4 | 0.0 | 0.4 | 0.4 | -0.4 | 0.4 | -0.0 |
tautz: manual_mpc17 | 0.8 | 1.1 | 1.5 | -1.2 | 1.0 | -1.0 | -0.7 | 1.1 | -1.1 | -1.2 | 1.2 | 1.1 | -0.8 | -1.1 | 0.8 | 1.0 | 1.2 | 1.0 | 1.1 |
tautz: manual_mpc2 | 2.3 | 2.7 | 3.1 | -1.8 | 1.7 | -1.6 | -0.4 | 1.7 | -1.8 | -1.7 | 1.8 | 1.7 | -1.6 | -1.7 | 1.6 | 1.5 | 1.8 | 1.5 | 1.7 |
tautz: manual_spc1 | 0.1 | 0.2 | 1.3 | 0.3 | 0.2 | -0.3 | 1.1 | 0.2 | 0.0 | 0.3 | -0.3 | 0.1 | -0.4 | -0.1 | 0.4 | 0.4 | -0.2 | 0.4 | 0.1 |
tautz: manual_spc16 | 0.1 | 0.1 | 0.6 | 0.1 | 0.3 | -0.4 | 0.8 | 0.3 | -0.2 | 0.0 | -0.0 | 0.3 | -0.4 | -0.3 | 0.4 | 0.4 | 0.1 | 0.5 | 0.3 |
tautz: manual_mpc13 | 0.4 | 0.5 | 1.5 | -0.1 | 0.7 | -0.7 | 1.2 | 0.6 | -0.5 | -0.1 | 0.1 | 0.5 | -0.9 | -0.6 | 0.9 | 0.9 | 0.3 | 0.8 | 0.6 |
tautz: manual_spc5 | 4.4 | 6.1 | 9.1 | 1.6 | -2.7 | 2.8 | -2.1 | -2.6 | 2.3 | 1.6 | -1.6 | -2.5 | 3.0 | 2.5 | -3.0 | -2.9 | -2.0 | -2.9 | -2.5 |
tautz: manual_spc3 | 2.3 | 2.9 | 6.4 | -2.4 | 1.3 | -1.2 | -2.5 | 1.4 | -1.8 | -2.3 | 2.3 | 1.5 | -0.9 | -1.5 | 0.9 | 1.0 | 2.1 | 0.9 | 1.5 |
tautz: manual_mpc6 | 0.1 | 0.1 | 0.1 | -0.3 | 0.3 | -0.3 | -0.1 | 0.3 | -0.3 | -0.3 | 0.3 | 0.3 | -0.2 | -0.3 | 0.2 | 0.3 | 0.3 | 0.3 | 0.3 |
tautz: manual_spc18 | 0.8 | 1.0 | 1.3 | 0.9 | -1.1 | 1.1 | -0.2 | -1.1 | 1.0 | 0.9 | -0.9 | -1.0 | 1.1 | 1.1 | -1.1 | -0.9 | -1.0 | -1.0 | -1.0 |
tautz: manual_mpc11 | 1.6 | 2.0 | 2.4 | 1.3 | -1.5 | 1.5 | -0.2 | -1.5 | 1.5 | 1.3 | -1.3 | -1.5 | 1.5 | 1.5 | -1.5 | -1.5 | -1.4 | -1.5 | -1.5 |
tautz: manual_spc19 | 2.8 | 3.9 | 5.3 | -1.6 | 2.2 | -2.2 | 0.9 | 2.1 | -2.0 | -1.6 | 1.6 | 2.1 | -2.2 | -2.1 | 2.2 | 2.3 | 1.8 | 2.3 | 2.1 |
tautz: manual_mpc8 | 2.0 | 2.5 | 3.4 | 1.9 | -1.6 | 1.5 | 0.8 | -1.6 | 1.7 | 1.8 | -1.8 | -1.6 | 1.5 | 1.6 | -1.5 | -1.3 | -1.8 | -1.3 | -1.6 |
tautz: manual_mpc1 | 0.5 | 0.6 | 4.8 | -1.1 | 0.0 | 0.1 | -2.2 | 0.1 | -0.5 | -1.0 | 1.0 | 0.2 | 0.3 | -0.2 | -0.3 | -0.3 | 0.7 | -0.3 | 0.2 |
Sum of all infusions from LGA sessions | 2.0 | 2.4 | 2.8 | 1.5 | -1.6 | 1.6 | 0.1 | -1.6 | 1.6 | 1.5 | -1.5 | -1.7 | 1.5 | 1.6 | -1.5 | -1.6 | -1.6 | -1.6 | -1.6 |
Ambulatory time at time1 of open field | 0.2 | 0.2 | 0.2 | -0.4 | 0.4 | -0.4 | -0.3 | 0.4 | -0.4 | -0.5 | 0.5 | 0.4 | -0.3 | -0.4 | 0.3 | 0.4 | 0.5 | 0.4 | 0.4 |
dd_expon_k | 1.7 | 1.8 | 2.4 | 1.6 | -1.3 | 1.3 | 0.7 | -1.4 | 1.5 | 1.5 | -1.6 | -1.4 | 1.2 | 1.4 | -1.2 | -1.2 | -1.5 | -1.2 | -1.4 |
Delay discounting AUC-traditional | 1.8 | 1.9 | 2.7 | -1.6 | 1.3 | -1.3 | -0.9 | 1.4 | -1.5 | -1.6 | 1.6 | 1.4 | -1.2 | -1.4 | 1.2 | 1.2 | 1.6 | 1.2 | 1.4 |
The total number of resting periods in time1 | 0.2 | 0.2 | 0.3 | 0.6 | -0.5 | 0.5 | 0.1 | -0.5 | 0.5 | 0.5 | -0.5 | -0.5 | 0.5 | 0.5 | -0.5 | -0.4 | -0.5 | -0.4 | -0.5 |
Area under the delay curve | 1.8 | 1.9 | 2.7 | -1.6 | 1.3 | -1.3 | -0.9 | 1.4 | -1.5 | -1.6 | 1.6 | 1.4 | -1.2 | -1.4 | 1.2 | 1.2 | 1.6 | 1.2 | 1.4 |
punishment | 0.1 | 0.1 | 0.2 | 0.3 | -0.3 | 0.3 | 0.0 | -0.3 | 0.3 | 0.3 | -0.3 | -0.4 | 0.2 | 0.3 | -0.2 | -0.5 | -0.3 | -0.4 | -0.3 |
runstartmale1 | 2.4 | 2.3 | 3.8 | 1.9 | -1.3 | 1.3 | 1.5 | -1.4 | 1.6 | 1.9 | -1.9 | -1.5 | 1.2 | 1.5 | -1.2 | -1.2 | -1.8 | -1.2 | -1.5 |
locomotor2 | 0.7 | 0.8 | 1.0 | 1.0 | -0.9 | 0.9 | 0.2 | -0.9 | 1.0 | 0.9 | -1.0 | -1.0 | 0.9 | 1.0 | -0.9 | -0.8 | -1.0 | -0.8 | -0.9 |
Weight adjusted by age | 0.5 | 0.6 | 1.1 | -0.4 | 0.8 | -0.8 | 0.8 | 0.8 | -0.6 | -0.4 | 0.4 | 0.7 | -1.0 | -0.7 | 1.0 | 1.0 | 0.5 | 1.0 | 0.7 |
Liver selenium concentration | 0.2 | 0.2 | 0.3 | 0.4 | -0.5 | 0.5 | -0.2 | -0.5 | 0.5 | 0.4 | -0.4 | -0.5 | 0.5 | 0.5 | -0.5 | -0.6 | -0.4 | -0.6 | -0.5 |
Liver rubidium concentration | 0.3 | 0.4 | 2.6 | -0.9 | 0.2 | -0.1 | -1.6 | 0.3 | -0.5 | -0.9 | 0.9 | 0.3 | 0.0 | -0.3 | -0.0 | -0.1 | 0.7 | -0.1 | 0.3 |
Liver iron concentration | 0.0 | 0.1 | 0.5 | 0.2 | 0.1 | -0.1 | 0.7 | 0.1 | 0.0 | 0.2 | -0.2 | 0.0 | -0.2 | -0.0 | 0.2 | 0.2 | -0.1 | 0.2 | 0.0 |
Liver cobalt concentration | 0.5 | 0.6 | 0.9 | 0.9 | -0.7 | 0.6 | 0.7 | -0.7 | 0.8 | 0.9 | -0.9 | -0.7 | 0.7 | 0.7 | -0.7 | -0.6 | -0.9 | -0.6 | -0.7 |
Liver cadmium concentration | 0.1 | 0.2 | 0.2 | -0.5 | 0.4 | -0.4 | -0.3 | 0.4 | -0.4 | -0.5 | 0.5 | 0.4 | -0.3 | -0.4 | 0.3 | 0.3 | 0.5 | 0.3 | 0.4 |
Liver zinc concentration | 1.6 | 1.8 | 5.0 | 1.9 | -0.9 | 0.8 | 2.2 | -1.0 | 1.3 | 1.9 | -1.8 | -1.2 | 0.6 | 1.1 | -0.6 | -0.8 | -1.6 | -0.7 | -1.2 |
Liver sodium concentration | 0.8 | 0.8 | 1.4 | -1.2 | 0.8 | -0.7 | -1.0 | 0.8 | -1.0 | -1.2 | 1.2 | 0.9 | -0.5 | -0.9 | 0.5 | 0.6 | 1.1 | 0.7 | 0.9 |
Liver manganese concentration | 2.2 | 2.5 | 5.6 | 0.5 | -1.7 | 1.8 | -2.4 | -1.6 | 1.2 | 0.5 | -0.5 | -1.5 | 2.0 | 1.5 | -2.0 | -2.0 | -0.9 | -2.0 | -1.5 |
For each tested trait, stats based on TWAS chi2 (squared Z-score) for the above models are shown. Avg chi2 ratio is the mean chi2 across all models for this gene, divided by the mean chi2 across all models for all genes. Avg chi2 is the mean chi2 across all models for this gene. Max chi2 is the highest chi2 across all models for this gene.
The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.