Fibp

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 IL alternative TSS ENSRNOT00000027927 0.27 0.14 1.2e-03 0.09 0.07 0.13 0.07 4.2e-03 1.1e-02 5.4e-04 1.2e-02
2 IL alternative TSS ENSRNOT00000097955 0.28 0.14 1.1e-03 0.09 0.07 0.13 0.07 4.2e-03 1.0e-02 4.4e-04 1.1e-02
3 NAcc gene expression ENSRNOG00000020567 0.1 0.06 5.3e-06 0.07 0.07 0.06 0.07 6.9e-06 5.6e-06 2.4e-05 1.1e-05

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
BMI with tail6.521.124.9-5.05.0-3.7
BMI without tail2.85.87.0-2.72.6-1.8
Body weight2.611.120.0-2.62.6-4.5
Epididymis fat weight0.82.05.90.0-0.02.4
Glucose1.11.62.3-1.11.11.5
Heart weight1.31.95.80.0-0.02.4
Left kidney weight0.10.41.10.3-0.21.1
Right kidney weight0.20.40.60.8-0.80.2
Tail length0.92.63.51.9-1.9-0.9
Length with tail0.82.87.00.9-0.8-2.6
Length without tail0.92.06.0-0.20.2-2.4
Liver weight, left0.00.00.1-0.00.00.2
Liver weight, right0.10.20.30.3-0.30.5
Parametrial fat weight1.22.43.0-1.41.51.7
Retroperitoneal fat weight1.75.817.30.1-0.14.2
Intraocular pressure1.31.82.21.5-1.51.0
Extensor digitorum longus weight3.915.736.9-2.32.3-6.1
Soleus weight1.75.013.11.0-0.93.6
Tibialis anterior weight4.013.941.5-0.30.3-6.4
Tibia length0.61.74.70.4-0.4-2.2
Number of licking bursts0.20.30.6-0.40.4-0.8
Food consumed during 24 hour testing period0.60.71.11.0-1.0-0.1
Times rat made contact with spout0.20.30.4-0.50.5-0.6
Mean time between licks in bursts0.10.10.10.3-0.3-0.3
Mean num. licks in bursts0.10.20.40.1-0.10.7
Std. dev. time between licks in bursts0.50.60.60.8-0.80.7
Water consumed over 24 hours0.20.20.60.2-0.2-0.8
Indifference point 0 sec0.00.10.1-0.30.30.2
Indifference point AUC1.61.85.3-0.30.3-2.3
Indifference point function ln k4.05.715.11.0-1.03.9
Indifference point function log k4.05.715.11.0-1.03.9
Delay discounting total patch changes 0 sec0.00.00.10.2-0.20.3
Delay discounting total patch changes 12 sec2.73.67.9-1.21.2-2.8
Delay discounting total patch changes 18 sec0.70.91.2-0.80.8-1.1
Delay discounting total patch changes 24 sec0.81.02.90.2-0.2-1.7
Delay discounting total patch changes 6 sec0.60.91.6-0.80.8-1.3
Delay discounting time to switch 0 sec4.26.57.2-2.72.7-2.2
Delay discounting water rate 0 sec5.38.49.32.8-2.83.0
Delay discounting water rate 12 sec10.115.120.83.5-3.54.6
Delay discounting water rate 18 sec2.93.86.91.5-1.52.6
Delay discounting water rate 24 sec4.86.69.02.3-2.33.0
Delay discounting water rate 6 sec5.07.39.42.5-2.53.1
Locomotor activity2.54.04.91.9-1.92.2
Locomotor testing distance3.76.17.72.3-2.32.8
Locomotor testing rearing2.33.66.51.4-1.52.6
Light reinforcement 10.30.50.50.7-0.70.7
Light reinforcement 20.40.60.70.7-0.70.8
Reaction time number correct0.60.81.11.0-1.1-0.5
Reaction time mean minus median2.33.16.3-1.21.2-2.5
Reaction time mean minus median AUC0.81.13.1-0.30.3-1.8
Reaction time num false alarms0.30.40.70.6-0.60.8
Reaction time num false alarms AUC0.10.10.10.3-0.30.1
Reaction time trials correct on left0.60.81.11.0-1.1-0.5
Reaction time trials on left0.70.91.21.1-1.1-0.6
Reaction time mean0.10.20.2-0.40.4-0.5
Reaction time mean AUC0.30.30.4-0.60.6-0.5
Median of all reaction times0.10.10.2-0.40.40.0
Reaction time omissions0.71.02.6-0.50.5-1.6
Reaction time false alarm rate0.10.10.40.0-0.00.6
Reaction time premature initiation rate0.50.61.80.2-0.3-1.3
Reaction time premature initiations1.11.63.50.8-0.8-1.9
Std. dev. reaction times0.70.91.9-0.60.6-1.4
Reaction time trials completed0.70.91.21.1-1.1-0.6
Reaction time trials AUC0.50.71.01.0-1.0-0.4
Social response proportion0.50.61.1-0.60.6-1.1
Social responses0.10.10.10.3-0.3-0.3
Social time0.20.30.30.6-0.6-0.4
Conditioned locomotion0.50.61.90.00.0-1.4
Cocaine response after cond. corrected0.80.92.50.4-0.41.6
Cocaine response after cond. not corrected0.60.72.00.2-0.21.4
Cocaine response before conditioning0.40.51.2-0.40.4-1.1
Saline control response1.41.94.9-0.60.6-2.2
Condit. Reinf. active minus inactive responses0.10.10.1-0.30.30.1
Condit. Reinf. active-inactive response ratio0.20.20.2-0.40.40.3
Condit. Reinf. active responses0.30.50.7-0.80.8-0.4
Condit. Reinf. inactive responses0.40.60.7-0.90.8-0.5
Condit. Reinf. lever presses1.41.94.6-0.70.7-2.1
Condit. Reinf. lever reinforcers received0.40.50.5-0.70.7-0.7
Pavlov. Cond. lever latency0.40.51.20.4-0.41.1
Pavlov. Cond. magazine entry latency2.83.25.9-1.41.3-2.4
Pavlov. Cond. change in total contacts2.02.85.2-1.31.3-2.3
Pavlov. Cond. index score2.02.65.3-1.11.1-2.3
Pavlov. Cond. latency score1.82.24.4-1.11.1-2.1
Pavlov. Cond. lever contacts0.30.40.90.3-0.3-1.0
Pavlov. Cond. magazine entry number4.25.211.11.5-1.53.3
Pavlov. Cond. intertrial magazine entries0.60.81.90.5-0.51.4
Pavlov. Cond. lever-magazine prob. diff.2.32.96.1-1.21.2-2.5
Pavlov. Cond. response bias1.01.33.6-0.50.5-1.9
Conditioned reinforcement - actives0.30.30.40.7-0.60.4
Conditioned reinforcement - inactives2.73.16.91.1-1.12.6
Conditioned locomotion5.36.311.61.9-1.93.4
Intermittent access intake day 1-15 change1.31.31.61.3-1.30.8
Intermittent access intake escalation0.70.60.70.9-0.80.7
Intermittent access intake escalation 20.80.81.11.1-1.10.4
Intermitt. access day 1 inactive lever presses0.70.82.30.2-0.21.5
Intermitt. access day 15 inactive lever presses0.80.92.10.5-0.51.5
Intermitt. access escalation Index1.41.23.3-0.40.41.8
Intermittent access day 1 total infusions2.42.74.9-1.31.32.2
Intermittent access day 15 total infusions2.62.98.40.4-0.32.9
Intermittent access terminal intake (last 3 days)1.51.75.1-0.00.02.3
Intermittent access total infusions1.41.63.8-0.70.72.0
Intermittent access day 1 locomotion2.22.23.1-1.31.31.8
Intermittent access day 15 total locomotion1.41.54.60.1-0.02.2
Intermittent access total locomotion2.22.55.1-1.11.12.3
Intermittent access standard deviation1.01.11.41.0-0.91.2
Cocaine induced anxiety0.10.10.10.3-0.3-0.1
Post-drug Anxiety0.70.71.60.5-0.5-1.3
Baseline Anxiety0.80.92.60.2-0.2-1.6
Lifetime Intake1.41.63.4-0.80.91.8
Incentive Sensitization - Responses0.10.10.2-0.20.20.4
Incentive Sensitization - Breakpoint0.10.10.4-0.10.10.6
Progressive ratio test 1 active lever presses1.21.23.30.4-0.41.8
Progressive ratio test 1 breakpoint1.21.23.10.6-0.61.8
Progressive ratio test 1 inactive lever presses0.50.51.5-0.00.01.2
Progressive ratio test 2 active lever presses1.41.54.20.4-0.32.0
Progressive ratio test 2 breakpoint2.42.66.20.9-0.92.5
Progressive ratio test 2 inactive lever presses2.83.29.50.2-0.23.1
Total sessions with >9 infusions0.80.91.7-0.70.71.3
Short access day 1 total inactive lever presses1.31.44.3-0.10.12.1
Short access day 10 total inactive lever presses1.82.05.00.7-0.72.2
Short access day 1 total infusions1.81.92.3-1.31.31.5
Short access day 10 total infusions2.62.94.1-2.02.00.7
Short access total infusions1.21.41.6-1.31.31.0
Short access day 1 locomotion1.31.42.1-1.01.01.4
Short access day 10 total locomotion1.11.21.2-1.11.11.1
Short access total locomotion1.21.21.3-1.11.11.0
Compulsive drug intake0.70.61.60.4-0.4-1.3
One hour access (0.3 mA shock)4.45.213.01.1-1.13.6
One hour access (shock baseline)3.03.59.50.7-0.73.1
Number of responses in last shaping day1.21.22.10.9-0.91.4
Context. condit. distance diff. score0.70.92.70.0-0.01.6
Locomotion velocity, session 10.20.20.30.6-0.60.2
Locomotion distance, session 11.31.72.2-1.51.5-0.9
Locomotion velocity, session 22.22.64.4-1.31.3-2.1
Locomotion distance, session 21.11.51.7-1.31.3-1.1
Locomotion velocity, session 30.60.71.1-1.01.00.1
Locomotion distance, session 30.00.00.00.0-0.00.2
Stereotopy head waving bouts, day 30.70.80.9-0.90.90.8
Stereotopy head waving duration, day 30.40.51.0-0.50.51.0
Locomotion velocity, session 71.92.13.1-1.81.80.2
Locomotion distance, session 70.50.71.0-1.01.00.1
Stereotopy head waving bouts, day 70.30.30.5-0.70.70.1
Stereotopy head waving duration, day 71.51.91.9-1.41.4-1.4
Locomotion velocity, session 80.30.30.50.5-0.5-0.7
Locomotion distance, session 80.40.60.8-0.90.90.3
Degree of sensitization distance0.70.81.1-1.11.1-0.1
Degree of sensitization stereotypy0.80.91.1-0.90.9-1.1
Condit. Reinf. active minus inactive responses0.40.40.5-0.70.7-0.5
Condit. Reinf. active-inactive response ratio0.00.00.0-0.20.2-0.2
Condit. Reinf. active responses0.50.70.9-0.90.9-0.5
Condit. Reinf. inactive responses0.60.71.0-1.01.0-0.2
Incentive salience index mean1.01.31.5-1.21.2-0.8
Condit. Reinf. lever presses0.60.80.9-0.90.9-1.0
Time in familiar zone, hab. session 10.30.30.4-0.60.60.3
Time in novel zone, hab. session 11.11.11.31.1-1.10.8
Total zone transitions, hab. session 10.60.91.5-0.70.8-1.2
Total locomotion distance, hab. session 10.30.40.6-0.80.80.3
Locomotion velocity, hab. session 10.30.40.6-0.80.8-0.1
Time in familiar zone, hab. session 20.50.50.70.8-0.80.5
Time in novel zone, hab. session 20.70.70.9-1.01.0-0.5
Total zone transitions, hab. session 23.64.75.9-2.42.4-1.5
Total locomotion distance, hab. session 21.72.33.4-1.91.9-0.1
Locomotion velocity, hab. session 21.72.33.4-1.81.8-0.0
Novel to familiar place preference ratio1.21.32.2-0.90.9-1.5
Novelty place preference0.80.81.1-0.80.8-1.1
Time in novel zone, NPP test0.60.60.8-0.70.7-0.9
Total zone transitions, NPP test2.13.04.3-1.51.5-2.1
Total locomotion distance, NPP test0.81.11.6-1.31.3-0.5
Locomotion velocity, NPP test0.81.21.6-1.21.2-0.6
Pavlov. Cond. lever latency0.50.70.80.9-0.90.7
Pavlov. Cond. magazine entry latency1.62.02.8-1.61.7-0.8
Pavlov. Cond. change in total contacts0.91.01.2-1.11.1-0.7
Pavlov. Cond. index score0.30.30.3-0.60.6-0.6
Pavlov. Cond. latency score0.30.40.5-0.70.7-0.4
Pavlov. Cond. lever contacts0.20.20.3-0.50.6-0.2
Pavlov. Cond. magazine entry number0.20.20.60.2-0.20.8
Pavlov. Cond. intertrial magazine entries0.40.50.60.8-0.80.6
Pavlov. Cond. lever-magazine prob. diff.0.50.70.8-0.80.8-0.9
Pavlov. Cond. response bias0.10.10.3-0.30.3-0.5
Bone: apparent density1.93.24.3-2.12.1-1.0
Bone surface3.66.49.8-2.22.2-3.1
Bone volume2.54.24.2-2.12.1-2.0
Bone: connectivity density2.94.64.6-2.22.1-2.1
Bone: cortical apparent density0.10.10.3-0.00.0-0.6
Bone: cortical area0.40.51.6-0.00.0-1.3
Bone: cortical porosity0.70.71.0-1.01.0-0.4
Bone: cortical porosity0.70.80.8-0.90.9-0.8
Bone: cortical thickness1.11.94.30.8-0.8-2.1
Bone: cortical thickness0.60.71.01.0-1.0-0.5
Bone: cortical tissue density0.10.10.40.0-0.0-0.6
Bone: elastic displacement3.23.64.12.0-2.01.6
Bone: elastic work0.50.60.80.9-0.9-0.5
Bone: endosteal estimation0.81.82.3-1.51.50.9
Bone: endosteal perimeter0.81.72.1-1.41.41.0
Bone: final force1.62.75.9-1.01.0-2.4
Bone: final moment1.42.45.2-1.01.0-2.3
Bone: marrow area0.91.92.4-1.61.61.0
Bone: maximum diameter0.10.20.50.1-0.1-0.7
Bone: maximum force3.66.38.8-2.22.2-3.0
Bone: maximum moment3.15.47.5-2.12.1-2.7
Bone: minimum diameter1.63.04.3-2.12.10.6
Bone: periosteal estimation0.20.50.7-0.80.9-0.3
Bone: periosteal perimeter0.30.50.5-0.70.7-0.6
Bone: post-yield work10.013.518.8-4.34.3-1.8
Bone: stiffness3.55.66.9-2.22.2-2.6
Bone: tissue strength0.10.10.1-0.30.3-0.3
Bone: trabecular number1.52.42.9-1.71.7-1.2
Bone: trabecular spacing0.30.40.60.6-0.60.7
Bone: trabecular thickness0.50.70.9-0.90.90.5
Bone: trabecular tissue density1.92.75.41.2-1.12.3
Breakpoint value in progressive ratio session1.92.15.1-0.80.8-2.3
Distance traveled before self-admin0.40.41.0-0.40.4-1.0
Distance traveled after self-admin0.20.20.4-0.20.3-0.6
Delta time in closed arm before/after self-admin0.10.10.10.3-0.30.3
Delta time in open arm before/after self-admin0.10.10.20.2-0.2-0.4
Diff in mean of infusions in LGA sessions0.20.20.40.4-0.4-0.6
Extinction: sum of active levers before priming4.64.67.1-1.81.8-2.7
Active lever presses in extinction session 61.11.12.70.5-0.5-1.6
Delta distance traveled before/after self-admin0.10.10.10.3-0.30.3
Delta ambulatory time before/after self-admin0.10.10.10.4-0.40.3
Time in closed arm before self-admin0.10.20.2-0.40.4-0.4
Time in closed arm after self-admin0.10.10.1-0.40.40.1
Time in open arm before self-admin0.50.51.30.3-0.31.1
Time in open arm after self-admin0.70.70.90.9-0.90.6
Sum of active levers in priming session hrs 5-61.61.52.01.2-1.1-1.4
Time to tail flick, vehicle, before self-admin0.90.91.0-1.01.0-0.9
Time to tail flick, vehicle, after self-admin1.31.41.4-1.21.2-1.2
Time to tail flick, test, before self-admin1.01.01.2-1.11.10.7
Time to tail flick, test, after self-admin0.20.20.30.5-0.50.0
Delta time to tail flick, vehicle, before/after SA0.30.30.3-0.50.5-0.6
Delta time to tail flick, test, before/after SA2.42.12.91.7-1.7-0.8
Ambulatory time before self-admin0.40.40.9-0.40.4-0.9
Ambulatory time after self-admin0.50.50.8-0.90.9-0.1
Total heroin consumption2.93.48.3-1.01.0-2.9
Area under the delay curve0.40.40.6-0.80.80.2
Delay disc. indifference point, 0s delay0.40.40.6-0.60.60.8
Delay disc. indifference point, 16s delay0.20.20.4-0.40.40.7
Delay disc. indifference point, 2s delay0.00.10.1-0.20.20.3
Delay disc. indifference point, 24s delay0.30.20.30.5-0.50.5
Delay disc. indifference point, 4s delay0.20.20.3-0.40.40.6
Delay disc. indifference point, 8s delay0.10.10.1-0.30.30.3
Delay discount exponential model param0.30.30.40.6-0.6-0.2
Delay discount hyperbolic model param0.20.20.30.6-0.5-0.1
Fecal boli incidents, locomotor time 10.10.10.3-0.20.2-0.6
Change in fecal boli incidents, locomotor task0.20.20.2-0.50.50.2
Time >=10cm from walls, locomotor time 11.51.52.2-1.51.50.3
Bouts of movement, locomotor time 10.60.61.8-0.10.1-1.4
Total resting periods, locomotor time 10.50.61.5-0.30.3-1.2
Rest time, locomotor task time 11.41.51.71.2-1.21.3
Distance moved, locomotor task time 10.80.91.3-1.11.1-0.5
Vertical activity count, locomotor time 10.50.51.50.2-0.21.2
Time >=10cm from walls, locomotor time 20.20.20.2-0.40.4-0.4
Bouts of movement, locomotor time 20.40.40.7-0.50.5-0.9
Total resting periods, locomotor time 20.40.40.4-0.60.6-0.7
Rest time, locomotor task time 21.01.13.00.4-0.41.7
Distance moved, locomotor task time 20.40.51.4-0.00.0-1.2
Vertical activity count, locomotor time 21.31.42.01.4-1.40.5
Weight adjusted by age1.01.13.2-0.10.1-1.8
Seeking ratio, delayed vs. immediate footshock0.60.71.1-1.01.0-0.0
Locomotion in novel chamber1.92.45.50.9-0.92.3
Locomotion in novel chamber post-restriction1.21.43.70.5-0.51.9
Progressive ratio4.65.36.0-2.42.4-2.0
Food seeking constrained by brief footshock0.00.00.10.1-0.1-0.2
Seeking ratio, punishment vs. effort3.34.04.02.0-2.02.0
Run reversals in cocaine runway, females2.32.33.2-1.81.8-0.7
Run reversals in cocaine runway, males2.52.53.41.8-1.80.8
Latency to leave start box in cocaine runway1.01.11.6-1.31.3-0.2
Latency to leave start box in cocaine runway, F0.60.71.0-1.01.0-0.3
Latency to leave start box in cocaine runway, M0.10.10.1-0.30.3-0.1
Cd content in liver1.41.51.51.2-1.21.2
Co content in liver2.73.23.41.8-1.81.8
Cu content in liver0.60.70.7-0.80.8-0.8
Fe content in liver0.10.10.10.3-0.3-0.4
K content in liver2.92.93.1-1.81.8-1.6
Mg content in liver3.43.55.0-2.22.2-0.6
Mn content in liver1.31.54.1-0.50.5-2.0
Na content in liver0.50.61.50.3-0.3-1.2
Rb content in liver0.81.11.7-0.80.91.3
Se content in liver0.10.20.2-0.40.4-0.3
Sr content in liver1.41.32.60.8-0.8-1.6
Zn content in liver1.11.21.9-0.90.9-1.4