Zbtb7a

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression ENSRNOG00000020161 0.02 0.02 5.7e-03 0.01 0.01 0 0.01 1.4e-02 2.9e-02 2.7e-01 4.8e-02
2 Brain gene expression ENSRNOG00000020161 0.06 0.05 4.7e-03 0 0.01 0.01 0.01 2.2e-01 1.5e-02 6.2e-02 2.6e-02
3 NAcc mRNA stability ENSRNOG00000020161 0.12 0.08 1.4e-05 0.07 0.05 0.06 0.06 5.8e-06 1.2e-04 4.3e-05 2.1e-05

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
BMI with tail5.116.523.34.6-2.3-4.8
BMI without tail1.83.77.22.0-0.3-2.7
Body weight0.93.75.22.2-1.0-2.3
Epididymis fat weight0.20.61.1-0.81.00.1
Glucose1.01.52.21.3-0.7-1.5
Heart weight0.40.61.2-0.81.10.2
Left kidney weight0.10.30.5-0.0-0.70.6
Right kidney weight1.13.04.2-2.00.92.1
Tail length2.78.110.9-3.32.52.7
Length with tail1.55.58.3-2.61.22.9
Length without tail0.30.60.90.0-1.00.9
Liver weight, left2.03.35.61.9-0.6-2.4
Liver weight, right1.52.53.21.8-1.1-1.8
Parametrial fat weight0.40.81.0-1.00.90.7
Retroperitoneal fat weight0.20.81.51.0-0.1-1.2
Intraocular pressure0.71.02.4-0.41.5-0.7
Extensor digitorum longus weight3.313.122.43.9-1.3-4.7
Soleus weight6.920.327.35.2-3.0-5.0
Tibialis anterior weight0.93.03.91.9-1.3-2.0
Tibia length0.82.22.8-1.71.21.5
Number of licking bursts0.50.51.2-0.21.1-0.6
Food consumed during 24 hour testing period0.30.40.60.7-0.4-0.8
Times rat made contact with spout0.20.30.60.30.4-0.8
Mean time between licks in bursts3.65.06.5-2.62.02.1
Mean num. licks in bursts0.10.10.30.3-0.60.0
Std. dev. time between licks in bursts0.80.92.0-0.8-0.31.4
Water consumed over 24 hours0.81.02.01.0-1.4-0.3
Indifference point 0 sec0.10.20.30.5-0.5-0.2
Indifference point AUC0.80.91.4-1.20.90.7
Indifference point function ln k0.10.20.30.6-0.3-0.4
Indifference point function log k0.10.20.30.6-0.3-0.4
Delay discounting total patch changes 0 sec0.10.10.20.4-0.3-0.2
Delay discounting total patch changes 12 sec0.40.61.30.40.5-1.1
Delay discounting total patch changes 18 sec0.91.11.5-1.20.91.1
Delay discounting total patch changes 24 sec0.00.00.1-0.30.10.3
Delay discounting total patch changes 6 sec0.20.30.4-0.60.30.7
Delay discounting time to switch 0 sec1.72.63.91.8-2.0-0.8
Delay discounting water rate 0 sec0.60.92.0-0.61.4-0.6
Delay discounting water rate 12 sec1.01.53.30.80.7-1.8
Delay discounting water rate 18 sec2.12.76.3-1.02.5-1.0
Delay discounting water rate 24 sec1.92.64.6-0.12.1-1.7
Delay discounting water rate 6 sec1.21.73.8-1.12.0-0.2
Locomotor activity2.74.38.5-2.10.22.9
Locomotor testing distance1.62.74.9-1.70.42.2
Locomotor testing rearing0.10.10.3-0.30.5-0.0
Light reinforcement 14.37.911.4-3.11.63.4
Light reinforcement 21.52.03.2-1.50.71.8
Reaction time number correct0.60.81.70.50.7-1.3
Reaction time mean minus median0.50.71.1-1.10.50.8
Reaction time mean minus median AUC0.50.71.70.2-1.30.5
Reaction time num false alarms0.10.10.20.00.3-0.4
Reaction time num false alarms AUC0.20.30.50.10.6-0.7
Reaction time trials correct on left0.60.81.70.50.7-1.3
Reaction time trials on left0.50.81.70.50.6-1.3
Reaction time mean0.20.30.90.2-1.00.3
Reaction time mean AUC0.30.41.00.3-1.00.2
Median of all reaction times0.50.71.60.7-1.3-0.2
Reaction time omissions0.20.30.5-0.60.00.7
Reaction time false alarm rate0.00.00.00.1-0.1-0.0
Reaction time premature initiation rate1.21.62.3-1.41.50.8
Reaction time premature initiations1.31.83.9-1.22.00.2
Std. dev. reaction times0.20.20.3-0.5-0.20.6
Reaction time trials completed0.50.81.70.50.6-1.3
Reaction time trials AUC0.60.91.80.40.9-1.4
Social response proportion0.40.51.0-0.60.01.0
Social responses5.16.611.1-2.80.93.3
Social time0.50.60.90.9-0.3-1.0
Conditioned locomotion1.31.63.31.10.5-1.8
Cocaine response after cond. corrected3.84.38.62.0-0.1-2.9
Cocaine response after cond. not corrected4.14.59.22.1-0.0-3.0
Cocaine response before conditioning0.30.40.9-0.60.10.9
Saline control response0.10.10.20.20.2-0.4
Condit. Reinf. active minus inactive responses2.42.93.8-1.91.91.3
Condit. Reinf. active-inactive response ratio1.01.02.4-0.71.6-0.4
Condit. Reinf. active responses1.92.63.5-1.91.21.7
Condit. Reinf. inactive responses0.91.12.2-1.10.11.5
Condit. Reinf. lever presses2.12.93.9-2.01.71.4
Condit. Reinf. lever reinforcers received1.52.12.9-1.71.31.3
Pavlov. Cond. lever latency0.70.91.41.0-0.5-1.2
Pavlov. Cond. magazine entry latency0.40.40.7-0.70.10.8
Pavlov. Cond. change in total contacts0.70.91.2-1.10.71.0
Pavlov. Cond. index score0.71.01.3-1.10.61.1
Pavlov. Cond. latency score0.70.81.4-1.00.31.2
Pavlov. Cond. lever contacts0.70.91.2-1.10.80.9
Pavlov. Cond. magazine entry number0.60.71.21.0-0.1-1.1
Pavlov. Cond. intertrial magazine entries0.30.40.80.40.4-0.9
Pavlov. Cond. lever-magazine prob. diff.0.70.91.4-1.10.41.2
Pavlov. Cond. response bias1.52.12.9-1.71.21.4
Conditioned reinforcement - actives2.02.02.8-1.70.91.5
Conditioned reinforcement - inactives0.50.51.10.60.3-1.0
Conditioned locomotion6.17.310.5-3.21.92.8
Intermittent access intake day 1-15 change6.05.98.0-2.82.02.4
Intermittent access intake escalation6.86.78.6-2.92.81.9
Intermittent access intake escalation 27.87.810.2-3.22.92.1
Intermitt. access day 1 inactive lever presses0.60.61.2-0.91.10.0
Intermitt. access day 15 inactive lever presses0.50.60.8-0.80.90.5
Intermitt. access escalation Index0.90.81.80.7-1.30.3
Intermittent access day 1 total infusions0.10.10.10.3-0.3-0.1
Intermittent access day 15 total infusions1.92.22.8-1.71.61.2
Intermittent access terminal intake (last 3 days)1.01.11.5-1.20.91.0
Intermittent access total infusions0.20.30.4-0.60.60.3
Intermittent access day 1 locomotion0.30.30.4-0.60.60.5
Intermittent access day 15 total locomotion3.13.34.6-2.21.61.6
Intermittent access total locomotion0.91.01.4-1.20.71.0
Intermittent access standard deviation2.72.94.3-2.11.71.3
Cocaine induced anxiety0.60.71.4-0.6-0.51.2
Post-drug Anxiety0.60.61.0-0.3-0.91.0
Baseline Anxiety0.20.20.4-0.30.7-0.1
Lifetime Intake0.10.10.1-0.30.30.2
Incentive Sensitization - Responses0.50.50.8-0.80.9-0.0
Incentive Sensitization - Breakpoint0.40.40.6-0.80.80.1
Progressive ratio test 1 active lever presses0.10.10.20.20.3-0.5
Progressive ratio test 1 breakpoint0.10.10.30.30.1-0.6
Progressive ratio test 1 inactive lever presses0.00.00.0-0.10.00.1
Progressive ratio test 2 active lever presses0.40.40.7-0.70.80.0
Progressive ratio test 2 breakpoint0.20.30.5-0.70.50.3
Progressive ratio test 2 inactive lever presses0.00.00.1-0.20.00.2
Total sessions with >9 infusions0.10.10.40.1-0.60.2
Short access day 1 total inactive lever presses0.00.00.1-0.20.30.1
Short access day 10 total inactive lever presses0.20.20.5-0.40.7-0.2
Short access day 1 total infusions0.20.30.5-0.1-0.50.7
Short access day 10 total infusions0.00.00.1-0.20.3-0.1
Short access total infusions0.00.00.10.0-0.30.1
Short access day 1 locomotion0.80.91.8-0.90.11.4
Short access day 10 total locomotion3.94.35.7-2.41.91.9
Short access total locomotion0.80.81.2-1.00.51.1
Compulsive drug intake1.11.11.41.2-1.1-0.8
One hour access (0.3 mA shock)0.10.20.30.4-0.2-0.5
One hour access (shock baseline)0.20.20.6-0.40.7-0.0
Number of responses in last shaping day0.10.10.2-0.40.20.4
Context. condit. distance diff. score0.20.20.40.5-0.2-0.6
Locomotion velocity, session 10.60.71.3-0.5-0.71.2
Locomotion distance, session 10.70.91.90.1-1.40.9
Locomotion velocity, session 22.53.06.3-1.6-0.52.5
Locomotion distance, session 21.42.04.2-1.0-0.92.0
Locomotion velocity, session 34.75.57.5-2.71.72.5
Locomotion distance, session 30.00.00.0-0.10.2-0.1
Stereotopy head waving bouts, day 33.34.06.2-2.20.82.5
Stereotopy head waving duration, day 34.04.87.0-2.51.22.6
Locomotion velocity, session 70.60.61.2-0.80.11.1
Locomotion distance, session 70.20.20.40.10.6-0.6
Stereotopy head waving bouts, day 70.50.61.40.3-1.20.5
Stereotopy head waving duration, day 70.60.71.2-0.1-1.11.0
Locomotion velocity, session 81.01.22.0-0.3-1.21.4
Locomotion distance, session 80.10.20.3-0.2-0.40.5
Degree of sensitization distance0.30.30.40.6-0.4-0.5
Degree of sensitization stereotypy2.02.23.21.6-1.8-0.9
Condit. Reinf. active minus inactive responses3.13.44.7-2.21.12.1
Condit. Reinf. active-inactive response ratio1.92.12.8-1.71.41.2
Condit. Reinf. active responses2.53.05.3-1.90.42.3
Condit. Reinf. inactive responses0.80.91.9-0.7-0.61.4
Incentive salience index mean1.51.83.3-1.50.21.8
Condit. Reinf. lever presses0.81.12.70.2-1.70.8
Time in familiar zone, hab. session 11.81.72.1-1.51.21.2
Time in novel zone, hab. session 11.41.32.51.1-1.6-0.4
Total zone transitions, hab. session 10.81.12.5-0.8-0.61.6
Total locomotion distance, hab. session 11.42.14.0-0.6-1.42.0
Locomotion velocity, hab. session 11.31.94.1-1.0-0.82.0
Time in familiar zone, hab. session 25.55.77.5-2.72.42.0
Time in novel zone, hab. session 24.44.45.62.4-2.3-1.6
Total zone transitions, hab. session 21.11.43.30.8-1.80.3
Total locomotion distance, hab. session 20.70.92.0-0.7-0.51.4
Locomotion velocity, hab. session 20.81.12.3-0.6-0.91.5
Novel to familiar place preference ratio4.14.46.12.3-2.5-1.4
Novelty place preference2.72.84.51.8-2.1-1.0
Time in novel zone, NPP test2.93.14.41.9-2.1-1.1
Total zone transitions, NPP test0.20.30.70.3-0.90.3
Total locomotion distance, NPP test0.50.71.60.5-1.30.3
Locomotion velocity, NPP test0.30.51.10.2-1.10.6
Pavlov. Cond. lever latency0.40.61.4-0.41.2-0.4
Pavlov. Cond. magazine entry latency2.32.93.9-2.01.41.7
Pavlov. Cond. change in total contacts0.00.00.1-0.20.00.3
Pavlov. Cond. index score0.30.40.8-0.5-0.30.9
Pavlov. Cond. latency score0.40.61.1-0.4-0.61.1
Pavlov. Cond. lever contacts0.60.71.60.2-1.30.7
Pavlov. Cond. magazine entry number0.50.60.70.9-0.5-0.8
Pavlov. Cond. intertrial magazine entries0.40.51.2-0.61.1-0.1
Pavlov. Cond. lever-magazine prob. diff.0.50.61.3-0.8-0.11.1
Pavlov. Cond. response bias0.70.91.2-1.10.61.1
Bone: apparent density1.42.35.40.6-2.31.1
Bone surface2.64.59.10.3-3.02.1
Bone volume2.74.59.00.3-3.02.1
Bone: connectivity density1.11.84.31.0-2.10.4
Bone: cortical apparent density0.60.71.01.0-0.5-1.0
Bone: cortical area1.01.53.11.1-1.8-0.1
Bone: cortical porosity0.50.51.2-0.6-0.11.1
Bone: cortical porosity0.50.50.90.1-1.00.7
Bone: cortical thickness1.01.62.11.5-1.4-0.9
Bone: cortical thickness0.20.30.6-0.30.8-0.4
Bone: cortical tissue density0.40.50.70.8-0.4-0.8
Bone: elastic displacement0.20.20.4-0.50.20.7
Bone: elastic work0.30.40.70.6-0.8-0.0
Bone: endosteal estimation0.30.61.20.8-1.1-0.3
Bone: endosteal perimeter0.30.71.4-0.4-0.71.2
Bone: final force1.42.33.71.6-1.9-0.8
Bone: final moment1.11.93.11.4-1.8-0.6
Bone: marrow area0.30.61.20.8-1.1-0.3
Bone: maximum diameter0.81.43.0-0.8-0.71.7
Bone: maximum force1.22.13.01.6-1.7-0.9
Bone: maximum moment1.01.82.61.5-1.6-0.8
Bone: minimum diameter0.20.41.00.3-1.00.4
Bone: periosteal estimation0.71.53.41.1-1.8-0.0
Bone: periosteal perimeter0.50.81.50.0-1.21.0
Bone: post-yield work0.40.60.80.8-0.4-0.9
Bone: stiffness2.64.15.52.3-2.0-1.7
Bone: tissue strength1.41.41.81.4-1.1-1.1
Bone: trabecular number0.91.32.7-0.6-1.01.6
Bone: trabecular spacing1.62.13.20.11.8-1.7
Bone: trabecular thickness3.23.98.80.7-3.01.6
Bone: trabecular tissue density1.31.83.51.40.1-1.9
Breakpoint value in progressive ratio session4.75.36.9-2.62.22.1
Distance traveled before self-admin0.30.30.60.5-0.8-0.4
Distance traveled after self-admin0.60.71.0-1.00.20.9
Delta time in closed arm before/after self-admin1.71.62.80.31.4-1.7
Delta time in open arm before/after self-admin1.11.01.31.2-1.0-0.9
Diff in mean of infusions in LGA sessions1.41.51.9-1.40.91.4
Extinction: sum of active levers before priming1.81.83.2-1.41.80.5
Active lever presses in extinction session 62.42.33.1-1.80.91.7
Delta distance traveled before/after self-admin1.31.42.0-1.30.71.4
Delta ambulatory time before/after self-admin1.31.42.3-1.30.51.5
Time in closed arm before self-admin1.21.42.51.3-1.6-0.3
Time in closed arm after self-admin0.00.00.1-0.10.20.0
Time in open arm before self-admin0.91.01.5-1.21.00.8
Time in open arm after self-admin0.50.50.80.8-0.4-0.9
Sum of active levers in priming session hrs 5-60.00.00.0-0.10.2-0.0
Time to tail flick, vehicle, before self-admin0.60.61.0-0.4-0.71.0
Time to tail flick, vehicle, after self-admin0.50.51.3-0.41.1-0.2
Time to tail flick, test, before self-admin0.50.50.9-0.0-0.81.0
Time to tail flick, test, after self-admin0.20.20.5-0.3-0.40.7
Delta time to tail flick, vehicle, before/after SA0.90.91.40.41.0-1.2
Delta time to tail flick, test, before/after SA0.40.40.8-0.50.9-0.1
Ambulatory time before self-admin0.20.20.30.4-0.6-0.4
Ambulatory time after self-admin0.30.40.6-0.80.20.7
Total heroin consumption1.51.72.3-1.50.81.5
Area under the delay curve2.02.12.71.6-1.5-1.2
Delay disc. indifference point, 0s delay7.48.010.43.1-3.2-1.9
Delay disc. indifference point, 16s delay0.10.10.20.4-0.5-0.2
Delay disc. indifference point, 2s delay5.25.87.42.7-2.4-2.1
Delay disc. indifference point, 24s delay0.40.40.60.8-0.4-0.7
Delay disc. indifference point, 4s delay1.51.52.71.3-1.6-0.5
Delay disc. indifference point, 8s delay0.80.81.41.0-0.3-1.2
Delay discount exponential model param1.71.92.4-1.51.31.2
Delay discount hyperbolic model param2.52.63.4-1.91.61.4
Fecal boli incidents, locomotor time 11.41.53.11.20.0-1.8
Change in fecal boli incidents, locomotor task0.60.50.9-0.3-0.81.0
Time >=10cm from walls, locomotor time 10.50.51.30.6-1.1-0.1
Bouts of movement, locomotor time 10.20.20.3-0.50.40.3
Total resting periods, locomotor time 10.20.20.3-0.60.30.5
Rest time, locomotor task time 10.20.20.3-0.50.00.5
Distance moved, locomotor task time 10.80.91.90.9-1.4-0.1
Vertical activity count, locomotor time 10.00.00.10.20.1-0.3
Time >=10cm from walls, locomotor time 20.70.81.60.8-0.1-1.3
Bouts of movement, locomotor time 20.40.50.9-0.4-0.61.0
Total resting periods, locomotor time 20.50.51.0-0.4-0.71.0
Rest time, locomotor task time 20.50.61.3-0.7-0.21.1
Distance moved, locomotor task time 20.60.71.50.80.1-1.2
Vertical activity count, locomotor time 20.80.91.90.50.6-1.4
Weight adjusted by age0.40.50.90.40.6-0.9
Seeking ratio, delayed vs. immediate footshock3.43.96.2-2.20.82.5
Locomotion in novel chamber0.40.60.9-0.81.00.1
Locomotion in novel chamber post-restriction0.60.70.9-0.90.60.9
Progressive ratio0.30.40.90.30.3-1.0
Food seeking constrained by brief footshock0.00.10.1-0.30.20.2
Seeking ratio, punishment vs. effort0.20.20.6-0.3-0.10.7
Run reversals in cocaine runway, females0.30.30.5-0.6-0.20.7
Run reversals in cocaine runway, males0.90.81.6-1.00.11.3
Latency to leave start box in cocaine runway1.01.12.3-0.8-0.61.5
Latency to leave start box in cocaine runway, F1.01.12.80.3-1.70.7
Latency to leave start box in cocaine runway, M3.13.03.8-1.91.91.2
Cd content in liver0.20.20.20.5-0.5-0.3
Co content in liver0.60.70.9-0.90.90.7
Cu content in liver0.50.61.50.5-1.20.2
Fe content in liver0.10.20.4-0.20.7-0.2
K content in liver0.40.41.00.2-1.00.4
Mg content in liver0.50.61.50.2-1.20.4
Mn content in liver1.82.13.6-0.5-1.61.9
Na content in liver1.11.21.81.2-1.4-0.6
Rb content in liver0.91.12.60.9-1.6-0.1
Se content in liver0.10.10.3-0.40.10.5
Sr content in liver0.50.41.1-0.31.1-0.3
Zn content in liver2.93.26.0-1.92.50.5