Eno4

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression ENSRNOG00000018310 0.05 0.04 1.9e-04 0.01 0.02 0.03 0.02 7.6e-03 2.0e-03 5.0e-04 2.2e-03
2 Brain mRNA stability ENSRNOG00000018310 0.03 0.02 1.1e-03 0.03 0.03 0.02 0.03 6.0e-04 1.2e-03 3.2e-03 1.4e-03
3 NAcc mRNA stability ENSRNOG00000018310 0.22 0.16 4.9e-04 0 0.03 0.04 0.02 1.6e-01 1.4e-03 1.0e-03 9.2e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
BMI with tail2.89.022.4-4.7-0.12.1
BMI without tail1.73.610.5-3.2-0.00.5
Body weight2.811.732.3-5.7-0.01.6
Epididymis fat weight3.06.919.3-4.4-1.20.2
Glucose1.01.54.3-2.10.0-0.3
Heart weight1.21.73.1-1.50.11.8
Left kidney weight2.47.019.8-0.80.84.4
Right kidney weight2.46.917.7-1.41.14.2
Tail length0.30.81.5-1.0-0.1-1.2
Length with tail0.31.13.2-1.8-0.10.1
Length without tail0.41.01.6-1.0-0.71.2
Liver weight, left1.42.26.2-2.50.3-0.6
Liver weight, right2.23.710.6-3.30.6-0.4
Parametrial fat weight2.55.013.4-3.7-1.1-0.5
Retroperitoneal fat weight3.612.133.0-5.7-1.01.5
Intraocular pressure1.11.52.5-0.7-1.2-1.6
Extensor digitorum longus weight0.73.08.7-3.00.30.3
Soleus weight4.112.019.8-4.53.71.7
Tibialis anterior weight0.93.27.7-2.81.3-0.4
Tibia length0.10.20.50.1-0.30.7
Number of licking bursts1.92.24.01.3-2.0-1.0
Food consumed during 24 hour testing period0.50.61.31.1-0.70.1
Times rat made contact with spout0.10.10.10.2-0.30.3
Mean time between licks in bursts1.62.24.30.5-1.4-2.1
Mean num. licks in bursts2.12.54.1-1.22.01.4
Std. dev. time between licks in bursts2.02.43.21.8-1.8-0.9
Water consumed over 24 hours0.30.30.60.50.30.8
Indifference point 0 sec0.50.71.4-1.2-0.70.6
Indifference point AUC0.30.30.6-0.8-0.4-0.3
Indifference point function ln k0.20.30.60.30.30.8
Indifference point function log k0.20.30.60.30.30.8
Delay discounting total patch changes 0 sec0.50.91.7-1.3-0.80.6
Delay discounting total patch changes 12 sec0.60.81.2-1.0-1.1-0.1
Delay discounting total patch changes 18 sec0.91.22.3-1.5-0.8-0.8
Delay discounting total patch changes 24 sec0.91.11.2-1.1-1.1-1.1
Delay discounting total patch changes 6 sec0.71.02.2-0.9-1.5-0.3
Delay discounting time to switch 0 sec0.40.51.00.10.8-1.0
Delay discounting water rate 0 sec0.50.81.8-0.7-0.51.4
Delay discounting water rate 12 sec0.40.61.6-0.5-1.3-0.1
Delay discounting water rate 18 sec0.50.61.6-0.20.41.3
Delay discounting water rate 24 sec1.21.62.1-1.31.11.4
Delay discounting water rate 6 sec0.40.61.3-0.60.51.2
Locomotor activity0.10.10.2-0.30.4-0.1
Locomotor testing distance0.40.61.1-0.11.00.9
Locomotor testing rearing0.71.22.1-1.11.50.5
Light reinforcement 10.20.40.80.60.20.9
Light reinforcement 20.60.71.71.3-0.20.7
Reaction time number correct0.81.22.3-1.50.9-0.7
Reaction time mean minus median1.51.94.1-2.01.3-0.3
Reaction time mean minus median AUC3.44.46.6-2.62.60.3
Reaction time num false alarms0.50.71.70.5-0.31.3
Reaction time num false alarms AUC0.60.92.50.30.21.6
Reaction time trials correct on left0.81.22.3-1.50.9-0.7
Reaction time trials on left0.91.32.6-1.60.9-0.7
Reaction time mean2.73.75.7-2.32.4-0.4
Reaction time mean AUC3.24.36.9-2.42.6-0.4
Median of all reaction times2.83.86.9-2.12.6-0.2
Reaction time omissions1.41.94.1-2.00.8-0.9
Reaction time false alarm rate0.91.32.31.2-0.61.5
Reaction time premature initiation rate0.60.82.1-0.20.41.5
Reaction time premature initiations0.70.91.1-1.00.91.0
Std. dev. reaction times2.23.16.5-2.61.6-0.4
Reaction time trials completed0.91.32.6-1.60.9-0.7
Reaction time trials AUC0.91.22.6-1.60.8-0.7
Social response proportion1.61.72.9-1.01.21.7
Social responses0.40.51.2-1.1-0.10.4
Social time2.12.84.4-1.92.10.7
Conditioned locomotion0.30.40.6-0.60.8-0.3
Cocaine response after cond. corrected1.71.92.01.41.31.4
Cocaine response after cond. not corrected1.11.22.51.60.90.6
Cocaine response before conditioning1.31.63.20.2-1.2-1.8
Saline control response0.30.40.5-0.60.70.5
Condit. Reinf. active minus inactive responses0.91.11.6-0.8-1.0-1.2
Condit. Reinf. active-inactive response ratio0.30.30.6-0.8-0.5-0.5
Condit. Reinf. active responses1.11.51.6-1.2-1.2-1.3
Condit. Reinf. inactive responses0.40.50.7-0.8-0.6-0.7
Condit. Reinf. lever presses0.30.40.6-0.6-0.8-0.5
Condit. Reinf. lever reinforcers received0.91.31.9-0.7-1.4-1.3
Pavlov. Cond. lever latency0.91.22.10.11.41.3
Pavlov. Cond. magazine entry latency0.60.71.4-0.90.1-1.2
Pavlov. Cond. change in total contacts0.50.71.6-0.4-0.7-1.2
Pavlov. Cond. index score0.60.71.4-0.6-0.6-1.2
Pavlov. Cond. latency score0.50.71.4-0.5-0.6-1.2
Pavlov. Cond. lever contacts0.40.60.9-0.2-1.0-0.9
Pavlov. Cond. magazine entry number0.30.40.60.7-0.00.8
Pavlov. Cond. intertrial magazine entries0.20.20.4-0.4-0.40.6
Pavlov. Cond. lever-magazine prob. diff.0.40.61.1-0.6-0.4-1.1
Pavlov. Cond. response bias0.71.01.8-0.3-1.1-1.4
Conditioned reinforcement - actives1.21.23.41.80.40.3
Conditioned reinforcement - inactives0.20.30.60.2-0.5-0.7
Conditioned locomotion1.11.43.92.00.00.5
Intermittent access intake day 1-15 change1.31.32.5-1.60.5-1.1
Intermittent access intake escalation0.80.81.2-1.11.0-0.2
Intermittent access intake escalation 20.50.50.8-0.90.7-0.4
Intermitt. access day 1 inactive lever presses2.12.33.7-1.9-0.5-1.7
Intermitt. access day 15 inactive lever presses0.40.41.2-1.10.1-0.3
Intermitt. access escalation Index0.40.30.5-0.70.60.2
Intermittent access day 1 total infusions0.00.00.10.30.2-0.0
Intermittent access day 15 total infusions0.60.61.1-0.81.0-0.3
Intermittent access terminal intake (last 3 days)0.30.30.5-0.60.7-0.4
Intermittent access total infusions0.10.20.5-0.20.7-0.1
Intermittent access day 1 locomotion0.80.81.9-0.11.40.7
Intermittent access day 15 total locomotion0.70.81.9-1.40.2-0.7
Intermittent access total locomotion0.60.61.5-0.31.20.6
Intermittent access standard deviation1.01.02.6-0.7-0.2-1.6
Cocaine induced anxiety2.52.87.82.8-0.70.4
Post-drug Anxiety0.80.92.21.5-0.70.2
Baseline Anxiety2.12.25.2-2.3-0.1-1.2
Lifetime Intake0.10.10.20.30.5-0.1
Incentive Sensitization - Responses3.33.38.2-2.91.30.4
Incentive Sensitization - Breakpoint3.13.28.2-2.91.10.2
Progressive ratio test 1 active lever presses0.40.41.0-0.41.0-0.0
Progressive ratio test 1 breakpoint0.20.20.5-0.10.7-0.2
Progressive ratio test 1 inactive lever presses0.10.10.3-0.0-0.3-0.5
Progressive ratio test 2 active lever presses1.61.73.1-1.81.30.5
Progressive ratio test 2 breakpoint2.02.24.5-2.11.40.4
Progressive ratio test 2 inactive lever presses0.20.20.40.1-0.6-0.5
Total sessions with >9 infusions0.60.61.10.20.81.1
Short access day 1 total inactive lever presses0.40.50.80.7-0.9-0.5
Short access day 10 total inactive lever presses0.30.40.9-0.9-0.5-0.1
Short access day 1 total infusions0.40.40.7-0.20.70.8
Short access day 10 total infusions0.30.30.70.50.80.2
Short access total infusions0.30.30.40.60.60.3
Short access day 1 locomotion0.30.30.5-0.70.60.1
Short access day 10 total locomotion0.40.40.8-0.50.90.5
Short access total locomotion1.71.83.0-0.01.71.5
Compulsive drug intake0.30.30.4-0.2-0.6-0.6
One hour access (0.3 mA shock)1.21.43.5-0.8-0.1-1.9
One hour access (shock baseline)0.10.20.3-0.00.4-0.6
Number of responses in last shaping day0.00.00.10.30.00.0
Context. condit. distance diff. score0.50.61.11.1-0.50.7
Locomotion velocity, session 10.00.00.10.4-0.1-0.0
Locomotion distance, session 10.60.81.31.20.31.0
Locomotion velocity, session 21.21.43.01.70.21.0
Locomotion distance, session 20.91.33.20.90.11.8
Locomotion velocity, session 30.40.41.01.00.10.6
Locomotion distance, session 30.91.01.91.00.51.4
Stereotopy head waving bouts, day 30.10.10.4-0.10.6-0.1
Stereotopy head waving duration, day 30.10.20.50.3-0.0-0.7
Locomotion velocity, session 70.50.50.70.7-0.60.8
Locomotion distance, session 70.70.92.20.7-0.11.5
Stereotopy head waving bouts, day 70.20.20.40.1-0.5-0.6
Stereotopy head waving duration, day 70.60.71.2-1.10.2-1.0
Locomotion velocity, session 81.92.34.82.2-1.5-0.1
Locomotion distance, session 83.04.59.23.0-1.51.4
Degree of sensitization distance0.20.20.4-0.4-0.6-0.3
Degree of sensitization stereotypy0.20.20.4-0.6-0.4-0.3
Condit. Reinf. active minus inactive responses1.01.12.01.4-1.10.0
Condit. Reinf. active-inactive response ratio0.70.81.21.1-0.8-0.6
Condit. Reinf. active responses1.11.42.61.1-1.60.5
Condit. Reinf. inactive responses0.91.12.50.6-1.60.7
Incentive salience index mean0.91.12.01.4-0.80.7
Condit. Reinf. lever presses0.30.40.90.6-0.20.9
Time in familiar zone, hab. session 11.91.82.1-1.41.41.2
Time in novel zone, hab. session 12.32.23.30.9-1.6-1.8
Total zone transitions, hab. session 10.60.81.7-0.60.61.3
Total locomotion distance, hab. session 11.01.42.61.2-1.6-0.3
Locomotion velocity, hab. session 10.81.22.11.2-1.4-0.2
Time in familiar zone, hab. session 21.01.02.3-0.4-0.8-1.5
Time in novel zone, hab. session 20.80.81.70.30.71.3
Total zone transitions, hab. session 20.50.60.9-0.70.90.7
Total locomotion distance, hab. session 20.10.10.3-0.0-0.30.5
Locomotion velocity, hab. session 20.10.10.3-0.2-0.00.6
Novel to familiar place preference ratio1.71.83.01.1-1.7-1.1
Novelty place preference1.31.42.20.9-1.5-1.0
Time in novel zone, NPP test1.71.83.10.7-1.8-1.3
Total zone transitions, NPP test0.20.30.7-0.30.30.8
Total locomotion distance, NPP test0.70.91.31.2-1.00.6
Locomotion velocity, NPP test0.91.32.21.5-0.80.9
Pavlov. Cond. lever latency0.60.72.1-0.1-0.4-1.4
Pavlov. Cond. magazine entry latency0.10.10.2-0.10.20.5
Pavlov. Cond. change in total contacts0.50.60.7-0.90.60.7
Pavlov. Cond. index score0.20.30.3-0.60.40.6
Pavlov. Cond. latency score0.20.20.4-0.40.40.6
Pavlov. Cond. lever contacts0.20.30.4-0.50.40.6
Pavlov. Cond. magazine entry number0.20.30.60.8-0.6-0.1
Pavlov. Cond. intertrial magazine entries0.91.11.80.8-0.91.3
Pavlov. Cond. lever-magazine prob. diff.0.20.30.4-0.60.40.5
Pavlov. Cond. response bias0.30.30.5-0.40.60.7
Bone: apparent density0.81.43.6-0.3-1.9-0.7
Bone surface0.61.13.20.1-1.8-0.1
Bone volume0.40.71.3-0.9-1.10.0
Bone: connectivity density0.81.33.20.4-1.8-0.6
Bone: cortical apparent density1.31.72.01.41.31.2
Bone: cortical area0.81.22.8-0.6-1.70.6
Bone: cortical porosity0.40.50.7-0.5-0.7-0.8
Bone: cortical porosity0.70.81.0-1.0-0.7-1.0
Bone: cortical thickness1.11.83.00.4-1.51.7
Bone: cortical thickness1.11.23.5-0.40.01.9
Bone: cortical tissue density1.31.72.01.41.31.1
Bone: elastic displacement0.70.81.1-1.01.10.5
Bone: elastic work1.62.03.1-1.01.41.8
Bone: endosteal estimation0.10.30.7-0.8-0.4-0.2
Bone: endosteal perimeter0.71.43.9-2.00.5-0.2
Bone: final force0.50.81.4-0.4-1.01.2
Bone: final moment0.40.71.0-0.5-1.01.0
Bone: marrow area0.10.30.8-0.9-0.4-0.2
Bone: maximum diameter0.81.42.7-1.6-1.0-0.8
Bone: maximum force0.61.01.60.2-1.31.2
Bone: maximum moment0.50.91.70.2-1.31.0
Bone: minimum diameter0.30.60.9-1.0-0.90.4
Bone: periosteal estimation0.40.81.4-0.8-1.20.5
Bone: periosteal perimeter1.11.85.3-2.30.00.4
Bone: post-yield work1.72.35.11.3-2.3-0.2
Bone: stiffness0.60.92.00.6-1.40.6
Bone: tissue strength0.30.30.70.2-0.3-0.8
Bone: trabecular number0.91.43.6-0.1-1.9-0.9
Bone: trabecular spacing0.30.40.90.60.0-0.9
Bone: trabecular thickness0.80.92.5-1.6-0.50.3
Bone: trabecular tissue density1.01.54.0-0.42.00.5
Breakpoint value in progressive ratio session1.61.82.7-1.6-0.4-1.6
Distance traveled before self-admin2.12.25.1-0.32.31.2
Distance traveled after self-admin0.91.02.10.11.50.8
Delta time in closed arm before/after self-admin0.30.30.80.90.20.5
Delta time in open arm before/after self-admin2.92.76.3-0.2-1.4-2.5
Diff in mean of infusions in LGA sessions0.80.91.8-0.6-0.7-1.3
Extinction: sum of active levers before priming1.31.32.3-1.50.2-1.3
Active lever presses in extinction session 60.80.71.9-1.40.2-0.4
Delta distance traveled before/after self-admin0.00.00.0-0.10.00.1
Delta ambulatory time before/after self-admin0.10.10.30.2-0.5-0.1
Time in closed arm before self-admin1.61.82.8-1.71.50.6
Time in closed arm after self-admin1.31.42.8-0.81.70.9
Time in open arm before self-admin2.42.56.02.5-1.30.0
Time in open arm after self-admin2.62.83.71.2-1.8-1.9
Sum of active levers in priming session hrs 5-61.41.43.7-0.7-0.2-1.9
Time to tail flick, vehicle, before self-admin1.01.02.30.9-1.5-0.2
Time to tail flick, vehicle, after self-admin0.10.10.20.1-0.30.4
Time to tail flick, test, before self-admin1.01.01.70.70.91.3
Time to tail flick, test, after self-admin0.80.81.5-0.6-0.8-1.2
Delta time to tail flick, vehicle, before/after SA0.80.81.8-1.30.80.2
Delta time to tail flick, test, before/after SA1.71.52.3-0.4-1.5-1.5
Ambulatory time before self-admin1.01.02.4-0.11.50.8
Ambulatory time after self-admin0.60.61.6-0.01.30.6
Total heroin consumption1.11.33.2-1.8-0.3-0.8
Area under the delay curve2.22.45.4-2.31.30.2
Delay disc. indifference point, 0s delay0.60.61.0-0.50.71.0
Delay disc. indifference point, 16s delay1.51.53.3-1.81.00.3
Delay disc. indifference point, 2s delay2.12.33.9-1.62.00.7
Delay disc. indifference point, 24s delay0.70.72.0-1.40.2-0.3
Delay disc. indifference point, 4s delay1.51.53.1-1.81.20.1
Delay disc. indifference point, 8s delay1.61.73.7-1.91.10.0
Delay discount exponential model param2.62.86.22.5-1.4-0.1
Delay discount hyperbolic model param2.62.75.82.4-1.5-0.2
Fecal boli incidents, locomotor time 10.10.10.30.2-0.6-0.3
Change in fecal boli incidents, locomotor task0.40.40.80.5-0.90.1
Time >=10cm from walls, locomotor time 10.40.40.90.9-0.70.0
Bouts of movement, locomotor time 10.80.91.3-1.2-0.1-1.1
Total resting periods, locomotor time 10.40.40.8-0.90.1-0.6
Rest time, locomotor task time 11.01.12.01.1-0.21.4
Distance moved, locomotor task time 10.40.40.8-0.90.7-0.2
Vertical activity count, locomotor time 10.40.40.6-0.60.80.5
Time >=10cm from walls, locomotor time 21.01.01.41.1-1.20.6
Bouts of movement, locomotor time 20.60.71.2-0.61.1-0.6
Total resting periods, locomotor time 21.01.01.8-1.01.3-0.6
Rest time, locomotor task time 20.40.40.9-0.50.90.3
Distance moved, locomotor task time 20.40.50.60.8-0.80.4
Vertical activity count, locomotor time 20.50.60.91.0-0.90.3
Weight adjusted by age1.31.42.9-1.70.51.1
Seeking ratio, delayed vs. immediate footshock1.11.23.61.9-0.3-0.1
Locomotion in novel chamber0.50.61.00.50.71.0
Locomotion in novel chamber post-restriction1.61.94.00.91.02.0
Progressive ratio1.92.25.02.2-1.2-0.6
Food seeking constrained by brief footshock0.40.51.01.0-0.2-0.6
Seeking ratio, punishment vs. effort1.41.72.4-1.51.40.8
Run reversals in cocaine runway, females0.10.10.1-0.3-0.4-0.3
Run reversals in cocaine runway, males0.70.71.3-0.11.10.8
Latency to leave start box in cocaine runway1.41.62.3-1.51.0-1.1
Latency to leave start box in cocaine runway, F1.11.22.2-1.50.7-0.9
Latency to leave start box in cocaine runway, M0.90.91.8-0.91.3-0.1
Cd content in liver3.74.07.22.7-2.0-0.9
Co content in liver1.21.42.41.5-0.71.2
Cu content in liver0.10.10.20.10.40.3
Fe content in liver0.60.71.80.4-1.3-0.2
K content in liver0.40.40.5-0.60.7-0.5
Mg content in liver1.71.72.7-1.61.5-0.5
Mn content in liver0.50.60.9-1.00.80.5
Na content in liver1.41.53.5-1.91.0-0.3
Rb content in liver1.01.32.0-1.41.0-0.8
Se content in liver0.50.61.20.6-1.1-0.6
Sr content in liver0.60.61.20.51.10.5
Zn content in liver2.83.15.9-0.72.41.7