Btbd6

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 Adipose gene expression ENSRNOG00000014693 0.2 0.13 5.6e-11 0.06 0.08 0.06 0.07 1.1e-07 6.9e-09 1.3e-07 4.8e-08
2 BLA gene expression ENSRNOG00000014693 0.06 0.05 2.1e-03 0.04 0.04 0.01 0.03 2.8e-03 3.0e-03 6.0e-02 1.1e-02
3 Liver gene expression ENSRNOG00000014693 0.05 0.04 2.2e-05 0.03 0.03 0.03 0.03 3.9e-04 2.5e-04 8.0e-04 4.9e-04

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
BMI with tail1.44.65.0-2.2-2.0-2.2
BMI without tail0.91.82.5-1.6-1.1-1.3
Body weight1.77.28.32.52.92.7
Epididymis fat weight1.43.33.8-1.6-1.8-2.0
Glucose0.00.00.0-0.2-0.2-0.1
Heart weight0.20.20.3-0.4-0.6-0.5
Left kidney weight3.18.99.32.93.13.0
Right kidney weight1.44.14.41.92.12.1
Tail length4.914.715.63.63.94.0
Length with tail9.735.436.75.86.16.0
Length without tail6.714.514.63.83.83.8
Liver weight, left2.74.44.92.02.22.1
Liver weight, right0.71.11.21.11.01.0
Parametrial fat weight0.10.20.2-0.5-0.5-0.5
Retroperitoneal fat weight0.00.10.1-0.2-0.3-0.3
Intraocular pressure0.50.70.8-0.9-0.8-0.7
Extensor digitorum longus weight9.939.640.96.36.16.4
Soleus weight2.88.210.53.22.52.7
Tibialis anterior weight1.03.54.62.11.61.8
Tibia length0.10.30.40.30.60.5
Number of licking bursts1.51.82.0-1.4-1.3-1.3
Food consumed during 24 hour testing period0.81.01.11.01.01.0
Times rat made contact with spout0.10.20.20.40.30.4
Mean time between licks in bursts0.60.81.0-1.0-0.7-0.9
Mean num. licks in bursts1.92.32.51.61.41.5
Std. dev. time between licks in bursts0.10.10.10.40.10.3
Water consumed over 24 hours0.70.81.10.60.91.0
Indifference point 0 sec6.410.411.13.23.13.3
Indifference point AUC8.19.510.23.23.03.0
Indifference point function ln k0.10.20.30.20.50.5
Indifference point function log k0.10.20.30.20.50.5
Delay discounting total patch changes 0 sec7.912.813.63.63.53.7
Delay discounting total patch changes 12 sec3.14.24.72.02.02.2
Delay discounting total patch changes 18 sec2.73.53.71.91.81.9
Delay discounting total patch changes 24 sec1.51.92.01.41.31.4
Delay discounting total patch changes 6 sec7.311.212.13.53.23.4
Delay discounting time to switch 0 sec11.918.219.3-4.1-4.3-4.4
Delay discounting water rate 0 sec16.025.427.64.85.05.3
Delay discounting water rate 12 sec3.65.47.01.62.62.5
Delay discounting water rate 18 sec2.63.54.21.52.02.0
Delay discounting water rate 24 sec1.92.63.31.21.81.7
Delay discounting water rate 6 sec3.75.35.92.12.42.4
Locomotor activity0.10.10.20.20.40.4
Locomotor testing distance0.00.00.10.10.20.2
Locomotor testing rearing2.13.33.8-1.7-1.9-1.8
Light reinforcement 10.00.00.0-0.00.10.1
Light reinforcement 20.70.91.3-0.9-0.8-1.1
Reaction time number correct4.15.96.22.42.32.5
Reaction time mean minus median0.00.10.1-0.3-0.1-0.2
Reaction time mean minus median AUC0.00.00.1-0.3-0.1-0.2
Reaction time num false alarms1.92.72.81.61.71.7
Reaction time num false alarms AUC2.13.03.21.61.81.8
Reaction time trials correct on left4.15.96.22.42.32.5
Reaction time trials on left4.15.96.22.42.42.5
Reaction time mean2.33.24.0-2.0-1.5-1.8
Reaction time mean AUC1.52.02.6-1.6-1.2-1.4
Median of all reaction times2.22.93.8-1.9-1.5-1.7
Reaction time omissions0.60.81.20.61.11.0
Reaction time false alarm rate0.10.20.30.30.50.4
Reaction time premature initiation rate0.10.10.10.30.30.4
Reaction time premature initiations1.92.83.01.71.61.7
Std. dev. reaction times1.62.22.9-1.7-1.2-1.5
Reaction time trials completed4.15.96.22.42.42.5
Reaction time trials AUC4.36.26.62.52.42.6
Social response proportion0.60.71.3-1.1-0.4-0.7
Social responses0.70.91.2-1.1-0.9-0.9
Social time0.20.30.7-0.8-0.1-0.2
Conditioned locomotion1.72.02.21.31.51.5
Cocaine response after cond. corrected0.10.10.20.40.10.1
Cocaine response after cond. not corrected0.10.10.2-0.2-0.3-0.5
Cocaine response before conditioning2.63.14.0-2.0-1.5-1.8
Saline control response0.00.00.10.2-0.10.1
Condit. Reinf. active minus inactive responses0.10.20.30.20.50.5
Condit. Reinf. active-inactive response ratio0.00.00.0-0.10.20.2
Condit. Reinf. active responses0.10.10.3-0.5-0.1-0.1
Condit. Reinf. inactive responses0.30.40.6-0.8-0.5-0.6
Condit. Reinf. lever presses2.43.43.9-2.0-1.7-1.8
Condit. Reinf. lever reinforcers received0.10.10.3-0.5-0.1-0.1
Pavlov. Cond. lever latency3.85.26.12.52.12.2
Pavlov. Cond. magazine entry latency4.14.84.8-2.2-2.2-2.2
Pavlov. Cond. change in total contacts6.69.29.6-3.0-3.1-3.0
Pavlov. Cond. index score5.47.07.4-2.7-2.6-2.6
Pavlov. Cond. latency score4.65.86.0-2.5-2.4-2.4
Pavlov. Cond. lever contacts3.95.56.1-2.5-2.2-2.3
Pavlov. Cond. magazine entry number3.94.85.12.22.32.2
Pavlov. Cond. intertrial magazine entries4.35.56.42.02.52.4
Pavlov. Cond. lever-magazine prob. diff.6.17.98.2-2.9-2.8-2.8
Pavlov. Cond. response bias4.25.76.5-2.5-2.3-2.4
Conditioned reinforcement - actives0.60.60.70.60.80.8
Conditioned reinforcement - inactives0.20.20.30.30.40.5
Conditioned locomotion0.00.00.00.1-0.0-0.0
Intermittent access intake day 1-15 change1.41.41.5-1.1-1.2-1.2
Intermittent access intake escalation1.31.31.4-1.0-1.2-1.2
Intermittent access intake escalation 20.10.10.1-0.1-0.3-0.3
Intermitt. access day 1 inactive lever presses2.42.63.01.41.71.7
Intermitt. access day 15 inactive lever presses0.20.20.30.30.50.5
Intermitt. access escalation Index0.00.00.0-0.2-0.2-0.0
Intermittent access day 1 total infusions0.10.10.20.40.30.3
Intermittent access day 15 total infusions0.80.91.0-0.8-1.0-1.0
Intermittent access terminal intake (last 3 days)1.21.31.6-1.0-1.2-1.2
Intermittent access total infusions0.10.10.1-0.1-0.3-0.2
Intermittent access day 1 locomotion0.00.00.00.1-0.1-0.0
Intermittent access day 15 total locomotion0.00.00.1-0.2-0.1-0.2
Intermittent access total locomotion0.10.10.10.30.10.2
Intermittent access standard deviation0.20.20.4-0.3-0.5-0.6
Cocaine induced anxiety0.20.20.30.40.40.6
Post-drug Anxiety0.20.20.30.50.40.6
Baseline Anxiety0.50.50.6-0.6-0.7-0.8
Lifetime Intake0.10.20.2-0.4-0.4-0.4
Incentive Sensitization - Responses0.20.20.4-0.6-0.4-0.4
Incentive Sensitization - Breakpoint0.20.20.4-0.6-0.4-0.4
Progressive ratio test 1 active lever presses0.20.20.3-0.5-0.3-0.4
Progressive ratio test 1 breakpoint0.20.20.3-0.6-0.4-0.4
Progressive ratio test 1 inactive lever presses1.51.61.91.01.31.4
Progressive ratio test 2 active lever presses0.10.10.1-0.4-0.2-0.2
Progressive ratio test 2 breakpoint0.00.00.1-0.3-0.1-0.1
Progressive ratio test 2 inactive lever presses0.10.10.2-0.5-0.1-0.1
Total sessions with >9 infusions0.10.10.1-0.3-0.2-0.2
Short access day 1 total inactive lever presses0.10.10.3-0.5-0.2-0.3
Short access day 10 total inactive lever presses0.10.10.2-0.20.40.2
Short access day 1 total infusions0.00.10.1-0.4-0.1-0.1
Short access day 10 total infusions0.30.30.4-0.6-0.5-0.6
Short access total infusions1.01.11.3-1.1-1.0-1.0
Short access day 1 locomotion0.50.50.6-0.8-0.6-0.7
Short access day 10 total locomotion0.00.00.00.10.00.0
Short access total locomotion0.10.10.1-0.4-0.2-0.2
Compulsive drug intake1.01.01.21.10.90.9
One hour access (0.3 mA shock)0.50.60.70.80.80.8
One hour access (shock baseline)0.20.20.3-0.4-0.5-0.4
Number of responses in last shaping day0.70.70.8-0.9-0.8-0.9
Context. condit. distance diff. score3.23.94.11.92.02.0
Locomotion velocity, session 10.10.10.10.20.30.3
Locomotion distance, session 10.10.20.2-0.3-0.5-0.5
Locomotion velocity, session 20.60.81.0-1.0-0.8-0.8
Locomotion distance, session 20.81.21.4-1.2-1.0-1.1
Locomotion velocity, session 30.10.10.4-0.1-0.6-0.2
Locomotion distance, session 30.20.20.3-0.4-0.6-0.4
Stereotopy head waving bouts, day 30.00.00.10.20.10.2
Stereotopy head waving duration, day 30.00.00.10.20.10.2
Locomotion velocity, session 70.20.20.50.70.30.4
Locomotion distance, session 70.81.01.1-0.9-1.0-1.0
Stereotopy head waving bouts, day 72.73.13.51.91.61.8
Stereotopy head waving duration, day 72.02.43.01.71.41.5
Locomotion velocity, session 82.63.13.21.81.81.8
Locomotion distance, session 80.40.60.70.80.70.8
Degree of sensitization distance0.10.10.1-0.3-0.2-0.3
Degree of sensitization stereotypy1.31.41.71.31.11.2
Condit. Reinf. active minus inactive responses0.20.20.3-0.4-0.5-0.5
Condit. Reinf. active-inactive response ratio1.21.31.5-1.0-1.2-1.2
Condit. Reinf. active responses0.10.10.10.40.30.3
Condit. Reinf. inactive responses1.92.32.41.51.41.6
Incentive salience index mean0.00.00.10.30.10.1
Condit. Reinf. lever presses0.40.60.60.80.80.7
Time in familiar zone, hab. session 10.00.00.10.2-0.2-0.0
Time in novel zone, hab. session 11.21.21.7-1.3-0.9-1.0
Total zone transitions, hab. session 10.71.01.2-1.1-0.9-0.9
Total locomotion distance, hab. session 10.00.10.1-0.4-0.1-0.1
Locomotion velocity, hab. session 10.20.30.30.30.60.6
Time in familiar zone, hab. session 20.91.01.41.20.90.8
Time in novel zone, hab. session 21.61.61.9-1.4-1.2-1.2
Total zone transitions, hab. session 20.20.20.3-0.3-0.5-0.4
Total locomotion distance, hab. session 20.00.10.10.20.20.3
Locomotion velocity, hab. session 20.10.20.30.40.40.5
Novel to familiar place preference ratio0.91.01.1-0.9-1.1-1.0
Novelty place preference1.21.31.4-1.1-1.2-1.1
Time in novel zone, NPP test0.50.50.6-0.6-0.8-0.7
Total zone transitions, NPP test0.30.50.60.60.70.7
Total locomotion distance, NPP test0.20.30.40.40.60.6
Locomotion velocity, NPP test0.10.10.20.20.40.4
Pavlov. Cond. lever latency0.00.00.0-0.1-0.20.0
Pavlov. Cond. magazine entry latency0.10.10.30.50.20.1
Pavlov. Cond. change in total contacts0.10.10.10.30.30.2
Pavlov. Cond. index score0.00.10.10.40.20.1
Pavlov. Cond. latency score0.00.00.10.30.20.1
Pavlov. Cond. lever contacts0.10.10.2-0.3-0.3-0.4
Pavlov. Cond. magazine entry number0.20.20.4-0.6-0.3-0.3
Pavlov. Cond. intertrial magazine entries8.19.710.23.13.03.2
Pavlov. Cond. lever-magazine prob. diff.0.10.10.20.40.20.1
Pavlov. Cond. response bias0.20.20.40.60.40.3
Bone: apparent density0.00.00.10.30.10.2
Bone surface0.40.60.8-0.7-0.9-0.7
Bone volume0.30.50.5-0.7-0.7-0.6
Bone: connectivity density0.30.50.60.70.70.8
Bone: cortical apparent density3.24.24.81.72.22.2
Bone: cortical area0.10.20.40.60.10.4
Bone: cortical porosity0.10.20.20.30.40.4
Bone: cortical porosity0.30.30.30.60.50.5
Bone: cortical thickness0.81.42.11.41.01.1
Bone: cortical thickness0.30.40.50.70.50.7
Bone: cortical tissue density3.14.14.81.72.22.2
Bone: elastic displacement0.10.10.3-0.5-0.2-0.3
Bone: elastic work1.11.52.0-1.4-1.1-1.1
Bone: endosteal estimation1.94.24.6-2.2-2.1-1.9
Bone: endosteal perimeter0.30.60.9-0.7-0.9-0.7
Bone: final force0.20.40.5-0.6-0.7-0.5
Bone: final moment0.10.10.2-0.3-0.5-0.3
Bone: marrow area1.94.24.6-2.2-2.1-1.9
Bone: maximum diameter0.20.30.6-0.3-0.8-0.5
Bone: maximum force0.00.00.1-0.1-0.3-0.1
Bone: maximum moment0.00.00.00.2-0.10.1
Bone: minimum diameter0.30.60.70.80.60.8
Bone: periosteal estimation0.61.21.5-1.0-1.2-1.0
Bone: periosteal perimeter0.00.00.10.0-0.3-0.1
Bone: post-yield work2.02.83.11.81.51.7
Bone: stiffness0.81.21.51.20.91.2
Bone: tissue strength0.30.30.3-0.6-0.5-0.5
Bone: trabecular number0.20.30.40.60.50.6
Bone: trabecular spacing0.00.00.0-0.1-0.1-0.2
Bone: trabecular thickness0.00.10.10.10.30.2
Bone: trabecular tissue density0.00.00.00.20.10.1
Breakpoint value in progressive ratio session0.10.10.30.60.10.2
Distance traveled before self-admin1.01.11.2-1.1-0.9-1.0
Distance traveled after self-admin0.00.00.1-0.00.20.2
Delta time in closed arm before/after self-admin0.10.10.10.20.40.3
Delta time in open arm before/after self-admin1.21.11.41.20.91.1
Diff in mean of infusions in LGA sessions1.31.42.51.60.81.1
Extinction: sum of active levers before priming0.00.00.10.30.10.1
Active lever presses in extinction session 61.31.21.41.20.91.2
Delta distance traveled before/after self-admin0.30.40.40.60.50.7
Delta ambulatory time before/after self-admin0.80.91.00.91.01.0
Time in closed arm before self-admin8.29.410.0-3.2-2.9-3.2
Time in closed arm after self-admin7.98.210.4-3.2-2.5-2.8
Time in open arm before self-admin5.65.96.62.22.52.6
Time in open arm after self-admin11.312.514.43.83.23.6
Sum of active levers in priming session hrs 5-60.10.10.2-0.1-0.3-0.4
Time to tail flick, vehicle, before self-admin2.52.52.71.51.61.6
Time to tail flick, vehicle, after self-admin1.01.11.31.10.91.1
Time to tail flick, test, before self-admin0.30.30.4-0.4-0.7-0.4
Time to tail flick, test, after self-admin5.65.85.92.42.42.4
Delta time to tail flick, vehicle, before/after SA0.30.30.50.70.30.5
Delta time to tail flick, test, before/after SA6.15.46.12.22.52.3
Ambulatory time before self-admin1.21.21.3-1.1-1.1-1.1
Ambulatory time after self-admin0.20.20.3-0.5-0.4-0.5
Total heroin consumption3.13.74.62.11.81.8
Area under the delay curve1.81.92.6-1.6-1.2-1.3
Delay disc. indifference point, 0s delay0.30.40.50.50.70.6
Delay disc. indifference point, 16s delay2.02.12.6-1.6-1.3-1.4
Delay disc. indifference point, 2s delay5.05.66.2-2.5-2.3-2.3
Delay disc. indifference point, 24s delay1.71.72.2-1.5-1.1-1.3
Delay disc. indifference point, 4s delay1.01.01.7-1.3-0.8-0.9
Delay disc. indifference point, 8s delay0.70.71.0-1.0-0.7-0.8
Delay discount exponential model param1.51.62.21.51.11.2
Delay discount hyperbolic model param2.02.12.71.61.31.4
Fecal boli incidents, locomotor time 10.00.00.10.1-0.2-0.3
Change in fecal boli incidents, locomotor task1.11.11.50.71.21.1
Time >=10cm from walls, locomotor time 14.34.45.12.32.11.9
Bouts of movement, locomotor time 10.91.01.2-0.8-1.1-1.1
Total resting periods, locomotor time 11.11.31.5-1.0-1.2-1.2
Rest time, locomotor task time 10.70.81.2-1.1-0.8-0.8
Distance moved, locomotor task time 10.80.91.0-0.9-0.9-1.0
Vertical activity count, locomotor time 10.10.10.1-0.3-0.1-0.3
Time >=10cm from walls, locomotor time 23.23.34.12.01.61.8
Bouts of movement, locomotor time 20.30.30.5-0.7-0.6-0.3
Total resting periods, locomotor time 20.50.50.8-0.9-0.7-0.5
Rest time, locomotor task time 20.20.20.5-0.7-0.1-0.4
Distance moved, locomotor task time 20.30.30.5-0.4-0.7-0.6
Vertical activity count, locomotor time 20.10.10.20.40.20.3
Weight adjusted by age0.00.00.10.10.20.3
Seeking ratio, delayed vs. immediate footshock0.30.40.50.70.50.6
Locomotion in novel chamber1.92.43.11.11.81.7
Locomotion in novel chamber post-restriction0.30.30.4-0.7-0.6-0.5
Progressive ratio2.22.53.7-1.9-1.3-1.5
Food seeking constrained by brief footshock0.00.00.0-0.1-0.20.0
Seeking ratio, punishment vs. effort1.21.52.31.50.91.2
Run reversals in cocaine runway, females2.92.93.1-1.7-1.6-1.8
Run reversals in cocaine runway, males0.10.10.1-0.4-0.3-0.2
Latency to leave start box in cocaine runway1.21.31.5-1.2-1.2-1.1
Latency to leave start box in cocaine runway, F0.20.20.3-0.4-0.5-0.5
Latency to leave start box in cocaine runway, M1.21.11.5-1.0-1.2-1.0
Cd content in liver0.30.30.50.20.70.6
Co content in liver0.80.91.01.00.91.0
Cu content in liver2.32.83.0-1.5-1.7-1.7
Fe content in liver0.91.11.2-1.0-1.1-1.1
K content in liver1.41.41.71.21.31.1
Mg content in liver0.20.20.40.20.60.4
Mn content in liver0.10.20.20.30.50.4
Na content in liver0.10.10.10.40.20.1
Rb content in liver0.10.10.10.10.30.4
Se content in liver0.00.00.0-0.20.0-0.1
Sr content in liver0.40.30.5-0.7-0.6-0.4
Zn content in liver0.10.10.2-0.4-0.3-0.3