# | tissue | modality | RNA phenotype | h2 | h2 se | h2 P | eQTL R2 | BLUP R2 | ENET R2 | LASSO R2 | eQTL P | BLUP P | ENET P | LASSO P |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Adipose | alternative TSS | ENSRNOT00000068083 | 0.0221 | 0.0171 | 8.1e-04 | 0.032 | 0.024 | 0.014 | 0.025 | 1.6e-04 | 1.0e-03 | 1.0e-02 | 7.6e-04 |
2 | Adipose | alternative TSS | ENSRNOT00000087322 | 0.0221 | 0.0170 | 7.3e-04 | 0.033 | 0.024 | 0.014 | 0.026 | 1.4e-04 | 9.0e-04 | 8.9e-03 | 5.8e-04 |
3 | Adipose | gene expression | ENSRNOG00000010492 | 0.0160 | 0.0130 | 5.9e-03 | 0.014 | 0.009 | 0.011 | 0.008 | 9.4e-03 | 3.1e-02 | 1.9e-02 | 3.6e-02 |
4 | BLA | alternative polyA | ENSRNOT00000068083 | 0.1200 | 0.0750 | 2.2e-05 | 0.093 | 0.076 | 0.081 | 0.087 | 1.1e-05 | 7.0e-05 | 3.9e-05 | 2.2e-05 |
5 | BLA | alternative polyA | ENSRNOT00000087322 | 0.1200 | 0.0770 | 2.0e-05 | 0.094 | 0.077 | 0.083 | 0.088 | 1.0e-05 | 6.1e-05 | 3.1e-05 | 1.9e-05 |
6 | Brain | alternative polyA | ENSRNOT00000068083 | 0.0370 | 0.0280 | 6.4e-04 | 0.033 | 0.028 | 0.017 | 0.024 | 4.7e-04 | 1.3e-03 | 8.8e-03 | 2.4e-03 |
7 | Brain | alternative polyA | ENSRNOT00000087322 | 0.0330 | 0.0260 | 9.9e-04 | 0.030 | 0.025 | 0.015 | 0.021 | 7.3e-04 | 2.1e-03 | 1.3e-02 | 4.3e-03 |
8 | Brain | gene expression | ENSRNOG00000010492 | 0.0310 | 0.0270 | 3.3e-03 | 0.021 | 0.008 | 0.009 | 0.011 | 4.5e-03 | 5.4e-02 | 4.8e-02 | 3.1e-02 |
9 | Eye | alternative polyA | ENSRNOT00000068083 | 0.3581 | 0.2044 | 4.2e-03 | 0.084 | 0.028 | 0.023 | 0.038 | 2.1e-02 | 1.2e-01 | 1.4e-01 | 9.0e-02 |
10 | Eye | alternative polyA | ENSRNOT00000087322 | 0.3562 | 0.1968 | 3.4e-03 | 0.090 | 0.033 | 0.035 | 0.039 | 1.8e-02 | 1.0e-01 | 9.7e-02 | 8.6e-02 |
11 | IL | gene expression | ENSRNOG00000010492 | 0.3510 | 0.2360 | 8.2e-04 | 0.088 | 0.044 | 0.012 | 0.057 | 3.9e-03 | 3.3e-02 | 1.7e-01 | 1.8e-02 |
12 | Liver | gene expression | ENSRNOG00000010492 | 0.0510 | 0.0340 | 2.7e-08 | 0.065 | 0.067 | 0.059 | 0.064 | 9.4e-08 | 5.7e-08 | 3.4e-07 | 1.2e-07 |
13 | Liver | mRNA stability | ENSRNOG00000010492 | 0.0209 | 0.0171 | 2.2e-03 | 0.019 | 0.024 | 0.008 | 0.022 | 2.9e-03 | 9.0e-04 | 4.3e-02 | 1.4e-03 |
14 | PL2 | alternative polyA | ENSRNOT00000068083 | 0.2250 | 0.1394 | 4.3e-08 | 0.098 | 0.111 | 0.106 | 0.123 | 5.7e-06 | 1.3e-06 | 2.3e-06 | 3.6e-07 |
15 | PL2 | alternative polyA | ENSRNOT00000087322 | 0.2345 | 0.1386 | 2.5e-08 | 0.097 | 0.118 | 0.110 | 0.125 | 6.1e-06 | 5.9e-07 | 1.5e-06 | 2.8e-07 |
16 | PL2 | gene expression | ENSRNOG00000010492 | 0.1700 | 0.1300 | 1.7e-04 | 0.092 | 0.062 | 0.094 | 0.083 | 1.0e-05 | 2.8e-04 | 9.0e-06 | 2.9e-05 |
All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, the gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method.
Trait | Avg chi2 ratio | Avg chi2 | Max chi2 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
dissection: UMAP 1 of all traits | 0.3 | 1.2 | 2.0 | -1.1 | 1.1 | -1.4 | 1.2 | -1.2 | 1.1 | -1.1 | -0.7 | 1.2 | -1.2 | -1.4 | -0.5 | 0.0 | 1.2 | -1.2 | -1.2 |
retroperitoneal_fat_g | 0.3 | 1.0 | 1.9 | 1.0 | -1.0 | 1.4 | -1.1 | 1.1 | -1.0 | 1.0 | 0.6 | -1.0 | 1.0 | 1.1 | 0.7 | 0.4 | -1.1 | 1.1 | 1.2 |
body_g | 0.4 | 1.5 | 2.6 | 1.4 | -1.4 | 1.6 | -1.2 | 1.2 | -1.3 | 1.3 | 1.0 | -1.4 | 1.4 | 1.4 | 0.7 | 0.0 | -1.2 | 1.2 | 1.2 |
dissection: UMAP 3 of all traits | 7.9 | 22.2 | 31.2 | 4.7 | -4.7 | 4.5 | -4.6 | 4.6 | -4.5 | 4.5 | 4.9 | -4.7 | 4.7 | 4.5 | 5.2 | 5.6 | -4.6 | 4.6 | 4.8 |
kidney_right_g | 0.2 | 0.7 | 1.1 | 0.8 | -0.8 | 1.1 | -0.9 | 0.9 | -0.9 | 0.9 | 0.5 | -0.9 | 0.9 | 1.0 | 0.4 | 0.0 | -0.9 | 0.9 | 0.9 |
dissection: PC 3 of all traits | 10.2 | 24.8 | 30.0 | 5.1 | -5.1 | 5.4 | -4.7 | 4.7 | -4.8 | 4.8 | 4.5 | -5.1 | 5.1 | 4.8 | 5.3 | 5.5 | -4.7 | 4.7 | 5.0 |
dissection: PC 2 of all traits | 9.4 | 24.2 | 28.4 | -4.9 | 4.9 | -5.0 | 4.8 | -4.8 | 4.7 | -4.7 | -5.1 | 5.0 | -5.0 | -4.8 | -5.2 | -5.3 | 4.8 | -4.8 | -4.9 |
glucose_mg_dl | 0.4 | 0.6 | 1.0 | 0.7 | -0.7 | 0.9 | -0.8 | 0.8 | -1.0 | 1.0 | 0.5 | -0.8 | 0.8 | 0.8 | 0.6 | 0.5 | -0.9 | 0.9 | 0.9 |
heart_g | 1.2 | 1.7 | 2.8 | 1.6 | -1.6 | 1.7 | -1.2 | 1.2 | -1.2 | 1.2 | 0.8 | -1.6 | 1.6 | 1.2 | 1.1 | 0.9 | -1.2 | 1.2 | 1.4 |
os_mean | 1.7 | 2.2 | 3.2 | -1.8 | 1.8 | -1.6 | 1.2 | -1.2 | 1.5 | -1.5 | -1.1 | 1.8 | -1.8 | -1.2 | -1.6 | -1.7 | 1.2 | -1.2 | -1.3 |
EDL weight in grams | 0.1 | 0.2 | 0.4 | 0.4 | -0.4 | 0.5 | -0.6 | 0.6 | -0.6 | 0.6 | 0.0 | -0.4 | 0.4 | 0.4 | 0.2 | -0.3 | -0.6 | 0.6 | 0.4 |
Tibia length in mm | 0.3 | 0.9 | 1.3 | 0.8 | -0.8 | 0.9 | -1.0 | 1.0 | -1.1 | 1.1 | 1.0 | -0.8 | 0.8 | 1.1 | 0.7 | 0.4 | -1.1 | 1.1 | 0.9 |
sol weight in grams | 0.9 | 2.7 | 3.2 | 1.8 | -1.8 | 1.8 | -1.6 | 1.6 | -1.6 | 1.6 | 1.2 | -1.8 | 1.8 | 1.7 | 1.6 | 1.5 | -1.7 | 1.7 | 1.6 |
TA weight in grams | 0.3 | 1.1 | 2.1 | -1.1 | 1.1 | -1.1 | 0.9 | -0.9 | 0.9 | -0.9 | -1.4 | 1.1 | -1.1 | -0.9 | -1.0 | -1.2 | 0.8 | -0.8 | -1.0 |
Average time between licks in bursts | 0.1 | 0.1 | 0.2 | 0.3 | -0.3 | 0.2 | -0.4 | 0.4 | -0.4 | 0.4 | 0.1 | -0.3 | 0.3 | 0.3 | 0.3 | 0.2 | -0.3 | 0.4 | 0.2 |
Std. dev. time between licks in bursts | 1.3 | 1.5 | 1.7 | 1.3 | -1.3 | 1.2 | -1.3 | 1.3 | -1.3 | 1.3 | 1.0 | -1.3 | 1.3 | 1.2 | 1.2 | 1.2 | -1.2 | 1.2 | 1.2 |
Number of licking bursts | 0.1 | 0.1 | 0.3 | -0.4 | 0.4 | -0.4 | 0.3 | -0.3 | 0.3 | -0.3 | -0.2 | 0.4 | -0.4 | -0.2 | -0.2 | -0.1 | 0.2 | -0.2 | -0.5 |
Food consumed during 24 hour testing period | 1.3 | 1.6 | 2.1 | -1.3 | 1.3 | -1.4 | 1.2 | -1.2 | 1.3 | -1.3 | -1.0 | 1.3 | -1.3 | -1.2 | -1.2 | -1.3 | 1.2 | -1.2 | -1.2 |
Water consumed over 24 hour session | 0.2 | 0.3 | 0.4 | -0.5 | 0.5 | -0.7 | 0.5 | -0.5 | 0.6 | -0.6 | -0.3 | 0.5 | -0.5 | -0.5 | -0.4 | -0.3 | 0.5 | -0.5 | -0.6 |
Times rat made contact with spout | 0.0 | 0.0 | 0.1 | -0.2 | 0.2 | -0.4 | 0.2 | -0.2 | 0.3 | -0.3 | -0.1 | 0.2 | -0.2 | -0.1 | -0.1 | 0.0 | 0.1 | -0.1 | -0.3 |
Average drop size | 0.0 | 0.1 | 0.2 | 0.2 | -0.2 | 0.2 | -0.2 | 0.2 | -0.1 | 0.1 | 0.1 | -0.2 | 0.2 | 0.4 | -0.0 | -0.2 | -0.3 | 0.3 | 0.5 |
light_reinforcement_lr_relactive | 0.1 | 0.1 | 0.4 | 0.1 | -0.1 | 0.2 | -0.3 | 0.3 | -0.2 | 0.2 | 0.6 | -0.1 | 0.1 | 0.3 | 0.3 | 0.4 | -0.3 | 0.3 | 0.3 |
light_reinforcement_lr_active | 0.3 | 0.6 | 1.8 | 0.7 | -0.7 | 0.6 | -0.7 | 0.7 | -0.7 | 0.7 | 0.7 | -0.7 | 0.7 | 0.7 | 1.1 | 1.3 | -0.7 | 0.7 | 0.9 |
Delay discounting water rate 0 sec | 0.6 | 1.0 | 1.4 | 1.1 | -1.1 | 1.2 | -1.1 | 1.1 | -0.9 | 0.9 | 0.9 | -1.1 | 1.1 | 0.9 | 0.7 | 0.5 | -1.0 | 1.0 | 0.9 |
Median of all reaction times | 0.4 | 0.5 | 1.0 | 0.2 | -0.2 | 0.1 | -0.8 | 0.8 | -0.9 | 0.9 | 0.8 | -0.2 | 0.2 | 0.9 | 0.9 | 1.0 | -0.8 | 0.8 | 0.7 |
locomotor_testing_activity | 0.7 | 1.1 | 2.1 | 1.1 | -1.1 | 1.0 | -1.0 | 1.0 | -1.0 | 1.0 | 1.5 | -1.0 | 1.0 | 1.1 | 1.2 | 1.3 | -1.0 | 1.0 | 0.8 |
reaction_time_corr | 0.2 | 0.3 | 0.7 | -0.2 | 0.2 | -0.1 | 0.5 | -0.5 | 0.7 | -0.7 | -0.7 | 0.2 | -0.2 | -0.8 | -0.5 | -0.5 | 0.7 | -0.7 | -0.7 |
reaction_time_leftcorr | 0.2 | 0.3 | 0.7 | -0.2 | 0.2 | -0.1 | 0.5 | -0.5 | 0.7 | -0.7 | -0.7 | 0.2 | -0.2 | -0.8 | -0.5 | -0.5 | 0.7 | -0.7 | -0.7 |
delay_discounting_pc1800 | 1.4 | 1.8 | 2.4 | 1.3 | -1.3 | 1.4 | -1.3 | 1.3 | -1.5 | 1.5 | 1.2 | -1.3 | 1.3 | 1.1 | 1.5 | 1.6 | -1.3 | 1.3 | 1.3 |
reaction_time_falsealarm | 0.2 | 0.3 | 0.7 | -0.4 | 0.4 | -0.6 | 0.6 | -0.6 | 0.6 | -0.6 | -0.3 | 0.5 | -0.5 | -0.7 | -0.4 | -0.3 | 0.7 | -0.7 | -0.8 |
social_reinforcement_socialrfq | 0.6 | 0.6 | 1.3 | -0.9 | 0.9 | -0.9 | 0.6 | -0.6 | 0.7 | -0.7 | -0.8 | 0.9 | -0.9 | -0.7 | -1.0 | -1.1 | 0.6 | -0.6 | -0.7 |
reaction_time_pinit | 0.7 | 1.0 | 1.4 | -0.9 | 0.9 | -1.2 | 1.0 | -1.0 | 0.9 | -0.9 | -1.0 | 1.0 | -1.0 | -1.0 | -0.9 | -1.0 | 1.0 | -1.0 | -1.1 |
reaction_time_pinit_slope | 0.4 | 0.6 | 0.7 | 0.7 | -0.7 | 0.8 | -0.7 | 0.7 | -0.7 | 0.7 | 0.8 | -0.7 | 0.7 | 0.8 | 0.8 | 0.8 | -0.7 | 0.7 | 0.8 |
reaction_time_peropfalsealarm_slope | 0.4 | 0.5 | 1.1 | -0.7 | 0.7 | -0.6 | 0.7 | -0.7 | 0.6 | -0.6 | -1.0 | 0.7 | -0.7 | -0.6 | -0.6 | -0.6 | 0.7 | -0.7 | -0.7 |
soc_socialavgti | 0.3 | 0.5 | 0.6 | -0.7 | 0.7 | -0.7 | 0.8 | -0.8 | 0.7 | -0.7 | -0.1 | 0.7 | -0.7 | -0.4 | -0.7 | -0.7 | 0.7 | -0.7 | -0.8 |
reaction_time_peropinit_slope | 2.2 | 2.4 | 3.5 | 1.8 | -1.8 | 1.7 | -1.5 | 1.5 | -1.4 | 1.4 | 1.2 | -1.9 | 1.9 | 1.6 | 1.5 | 1.3 | -1.4 | 1.4 | 1.4 |
reaction_time_meanrt_slope | 2.2 | 2.5 | 3.4 | -1.8 | 1.8 | -1.8 | 1.4 | -1.4 | 1.5 | -1.5 | -1.5 | 1.8 | -1.8 | -1.3 | -1.7 | -1.8 | 1.4 | -1.4 | -1.4 |
reaction_time_devmedrt_slope | 5.4 | 5.6 | 6.8 | -2.4 | 2.4 | -2.4 | 2.3 | -2.3 | 2.2 | -2.2 | -2.4 | 2.3 | -2.3 | -2.5 | -2.5 | -2.6 | 2.3 | -2.3 | -2.4 |
pavca_ny_levercs_d4d5 | 0.4 | 0.6 | 0.8 | 0.8 | -0.8 | 0.8 | -0.8 | 0.8 | -0.8 | 0.8 | 0.6 | -0.8 | 0.8 | 0.7 | 0.9 | 0.9 | -0.8 | 0.8 | 0.7 |
pavca_ny_d2_magazine_cs | 2.2 | 2.5 | 3.5 | -1.7 | 1.7 | -1.4 | 1.5 | -1.5 | 1.5 | -1.5 | -1.6 | 1.7 | -1.7 | -1.9 | -1.4 | -1.3 | 1.7 | -1.7 | -1.4 |
ccp_trial_3_saline_dist_mm | 0.1 | 0.1 | 0.3 | 0.3 | -0.3 | 0.3 | -0.3 | 0.3 | -0.3 | 0.3 | 0.3 | -0.3 | 0.3 | 0.1 | 0.3 | 0.5 | -0.2 | 0.2 | 0.3 |
pavca_ny_d5_magazine_ncs | 1.5 | 1.9 | 3.6 | -1.4 | 1.4 | -1.2 | 1.4 | -1.4 | 1.3 | -1.3 | -1.9 | 1.4 | -1.4 | -1.3 | -1.3 | -1.3 | 1.4 | -1.4 | -1.3 |
ccp_change_in_locomotor_activity | 1.1 | 1.3 | 2.2 | 1.0 | -1.0 | 1.1 | -1.2 | 1.2 | -1.3 | 1.3 | 1.5 | -1.0 | 1.0 | 1.2 | 1.0 | 0.9 | -1.2 | 1.2 | 0.9 |
Conditioned locomotion | 4.4 | 5.2 | 6.3 | 2.3 | -2.3 | 2.0 | -2.3 | 2.3 | -2.3 | 2.3 | 2.2 | -2.3 | 2.3 | 2.2 | 2.5 | 2.5 | -2.3 | 2.3 | 2.2 |
Total sessions with >9 infusions | 0.5 | 0.5 | 0.8 | 0.4 | -0.4 | 0.4 | -0.9 | 0.9 | -0.9 | 0.9 | 0.9 | -0.4 | 0.4 | 0.9 | 0.7 | 0.7 | -0.8 | 0.8 | 0.8 |
Velocity during novelty place preference test | 1.4 | 2.1 | 3.8 | -1.3 | 1.3 | -1.2 | 1.5 | -1.5 | 1.4 | -1.4 | -2.0 | 1.3 | -1.3 | -1.6 | -1.4 | -1.4 | 1.5 | -1.5 | -1.4 |
crf_mi_active_responses | 0.0 | 0.1 | 0.1 | -0.3 | 0.3 | -0.2 | 0.2 | -0.2 | 0.3 | -0.3 | -0.1 | 0.3 | -0.3 | -0.1 | -0.2 | -0.0 | 0.2 | -0.2 | -0.3 |
pavca_mi_d1_avg_mag_lat | 2.5 | 3.0 | 3.6 | 1.9 | -1.9 | 1.8 | -1.7 | 1.7 | -1.7 | 1.7 | 1.2 | -1.9 | 1.9 | 1.6 | 1.8 | 1.8 | -1.7 | 1.7 | 1.7 |
pavca_mi_d3_magazine_ncs | 0.0 | 0.0 | 0.1 | 0.0 | -0.0 | 0.3 | -0.2 | 0.2 | -0.3 | 0.3 | 0.1 | -0.0 | 0.0 | 0.3 | 0.2 | 0.2 | -0.1 | 0.2 | 0.1 |
pavca_mi_d1_prob_lev | 1.6 | 2.2 | 2.8 | -1.3 | 1.3 | -1.6 | 1.6 | -1.6 | 1.5 | -1.5 | -1.3 | 1.3 | -1.3 | -1.7 | -1.3 | -1.2 | 1.6 | -1.6 | -1.6 |
pavca_mi_d1_avg_lev_lat | 0.2 | 0.3 | 0.6 | 0.2 | -0.2 | 0.5 | -0.6 | 0.6 | -0.5 | 0.5 | 0.5 | -0.2 | 0.2 | 0.7 | 0.2 | 0.0 | -0.7 | 0.7 | 0.8 |
pavca_mi_d3_prob_mag | 0.2 | 0.2 | 0.5 | 0.6 | -0.6 | 0.7 | -0.5 | 0.5 | -0.6 | 0.6 | 0.4 | -0.5 | 0.5 | 0.4 | 0.3 | -0.0 | -0.4 | 0.4 | 0.5 |
Total cortical area | 0.2 | 0.3 | 0.5 | -0.5 | 0.5 | -0.6 | 0.7 | -0.7 | 0.6 | -0.6 | -0.5 | 0.5 | -0.5 | -0.5 | -0.4 | -0.1 | 0.7 | -0.7 | -0.7 |
tb_th_sd | 1.7 | 2.0 | 2.6 | 1.5 | -1.5 | 1.6 | -1.4 | 1.4 | -1.3 | 1.3 | 1.3 | -1.5 | 1.5 | 1.5 | 1.2 | 1.1 | -1.5 | 1.5 | 1.6 |
Cortical porosity | 0.5 | 0.5 | 1.1 | 0.7 | -0.7 | 0.7 | -0.7 | 0.7 | -0.8 | 0.8 | 1.0 | -0.7 | 0.7 | 0.7 | 0.7 | 0.8 | -0.7 | 0.7 | 0.6 |
length | 0.0 | 0.0 | 0.2 | 0.1 | -0.1 | 0.3 | -0.1 | 0.1 | -0.1 | 0.1 | -0.4 | -0.1 | 0.1 | 0.1 | -0.2 | -0.4 | -0.1 | 0.1 | 0.2 |
Trabecular tissue density | 0.2 | 0.2 | 0.7 | -0.2 | 0.2 | -0.4 | 0.6 | -0.6 | 0.5 | -0.5 | -0.8 | 0.2 | -0.2 | -0.6 | -0.3 | -0.3 | 0.5 | -0.5 | -0.3 |
ctth_sd | 0.2 | 0.3 | 0.5 | 0.6 | -0.6 | 0.4 | -0.4 | 0.4 | -0.5 | 0.5 | 0.7 | -0.6 | 0.6 | 0.6 | 0.6 | 0.7 | -0.4 | 0.4 | 0.4 |
tautz: manual_spc7 | 0.1 | 0.1 | 0.2 | -0.4 | 0.4 | -0.4 | 0.3 | -0.3 | 0.4 | -0.4 | 0.1 | 0.4 | -0.4 | -0.4 | -0.1 | 0.3 | 0.3 | -0.3 | -0.4 |
tautz: manual_mpc15 | 1.7 | 2.3 | 3.0 | -1.7 | 1.7 | -1.1 | 1.5 | -1.5 | 1.4 | -1.4 | -1.3 | 1.7 | -1.7 | -1.5 | -1.6 | -1.6 | 1.5 | -1.5 | -1.3 |
tautz: manual_mpc18 | 0.1 | 0.2 | 0.4 | -0.5 | 0.5 | -0.6 | 0.3 | -0.3 | 0.5 | -0.5 | -0.1 | 0.5 | -0.5 | -0.3 | -0.3 | -0.3 | 0.3 | -0.3 | -0.3 |
tautz: manual_spc15 | 1.1 | 1.6 | 2.0 | -1.2 | 1.2 | -1.4 | 1.4 | -1.4 | 1.3 | -1.3 | -1.3 | 1.1 | -1.1 | -1.3 | -1.0 | -0.8 | 1.4 | -1.4 | -1.2 |
tautz: manual_spc21 | 1.3 | 1.6 | 2.4 | -1.4 | 1.4 | -1.5 | 1.0 | -1.0 | 1.1 | -1.1 | -1.5 | 1.4 | -1.4 | -1.0 | -1.4 | -1.5 | 1.0 | -1.0 | -1.1 |
tautz: manual_spc9 | 0.4 | 0.6 | 2.2 | 0.4 | -0.4 | 0.6 | -0.7 | 0.7 | -0.8 | 0.8 | 1.5 | -0.4 | 0.4 | 0.9 | 0.9 | 1.2 | -0.7 | 0.7 | 0.6 |
tautz: manual_mpc3 | 0.1 | 0.2 | 0.5 | 0.6 | -0.6 | 0.6 | -0.2 | 0.2 | -0.1 | 0.1 | 0.1 | -0.7 | 0.7 | 0.0 | 0.3 | 0.2 | -0.2 | 0.2 | 0.2 |
tautz: manual_spc12 | 0.0 | 0.0 | 0.1 | -0.0 | 0.0 | -0.1 | 0.1 | -0.1 | -0.1 | 0.1 | 0.4 | 0.0 | -0.0 | -0.2 | 0.1 | 0.2 | 0.1 | -0.1 | -0.1 |
tautz: manual_spc14 | 0.1 | 0.1 | 0.6 | -0.4 | 0.4 | -0.2 | 0.1 | -0.1 | 0.2 | -0.2 | -0.7 | 0.3 | -0.3 | -0.1 | -0.4 | -0.7 | 0.1 | -0.1 | 0.2 |
tautz: manual_spc8 | 0.1 | 0.2 | 0.6 | -0.6 | 0.6 | -0.7 | 0.1 | -0.1 | 0.2 | -0.2 | -0.4 | 0.6 | -0.6 | -0.1 | -0.6 | -0.8 | 0.1 | -0.1 | -0.2 |
tautz: manual_mpc7 | 0.1 | 0.1 | 0.2 | -0.0 | 0.0 | 0.2 | -0.2 | 0.2 | -0.2 | 0.2 | 0.5 | -0.0 | 0.0 | 0.3 | 0.3 | 0.5 | -0.2 | 0.2 | 0.0 |
tautz: manual_mpc16 | 0.2 | 0.3 | 0.5 | 0.4 | -0.4 | 0.4 | -0.7 | 0.7 | -0.5 | 0.5 | 0.7 | -0.4 | 0.4 | 0.7 | 0.3 | 0.3 | -0.7 | 0.7 | 0.5 |
tautz: manual_mpc4 | 0.1 | 0.1 | 0.8 | 0.1 | -0.1 | 0.0 | -0.1 | 0.1 | -0.3 | 0.3 | 0.5 | -0.1 | 0.1 | 0.1 | 0.6 | 0.9 | -0.1 | 0.1 | 0.0 |
tautz: manual_mpc10 | 0.4 | 0.5 | 0.8 | -0.6 | 0.6 | -0.5 | 0.7 | -0.7 | 0.8 | -0.8 | -0.5 | 0.7 | -0.7 | -0.9 | -0.9 | -0.9 | 0.7 | -0.7 | -0.8 |
tautz: manual_mpc5 | 0.0 | 0.1 | 0.1 | -0.0 | 0.0 | -0.2 | 0.3 | -0.3 | 0.3 | -0.3 | -0.2 | 0.0 | -0.0 | -0.3 | -0.2 | -0.2 | 0.3 | -0.3 | -0.3 |
tautz: manual_spc22 | 0.9 | 1.3 | 1.9 | -0.9 | 0.9 | -1.0 | 1.1 | -1.1 | 1.2 | -1.2 | -1.0 | 1.0 | -1.0 | -1.2 | -1.3 | -1.4 | 1.2 | -1.2 | -1.2 |
tautz: manual_mpc14 | 0.0 | 0.0 | 0.2 | 0.3 | -0.3 | 0.4 | -0.0 | 0.0 | 0.2 | -0.2 | -0.0 | -0.3 | 0.3 | 0.1 | 0.1 | 0.0 | -0.0 | 0.0 | 0.2 |
tautz: manual_mpc12 | 1.3 | 1.9 | 2.6 | 1.2 | -1.2 | 1.2 | -1.5 | 1.5 | -1.6 | 1.6 | 1.5 | -1.3 | 1.3 | 1.6 | 1.1 | 0.8 | -1.5 | 1.5 | 1.4 |
tautz: manual_mcs | 0.8 | 0.9 | 1.2 | 1.0 | -1.0 | 0.8 | -1.0 | 1.0 | -1.1 | 1.1 | 1.0 | -1.0 | 1.0 | 0.9 | 0.8 | 0.7 | -1.0 | 1.0 | 0.9 |
tautz: manual_spc17 | 0.9 | 1.3 | 2.4 | -0.8 | 0.8 | -0.9 | 1.1 | -1.1 | 1.2 | -1.2 | -1.5 | 0.8 | -0.8 | -1.1 | -1.3 | -1.5 | 1.1 | -1.1 | -1.2 |
tautz: manual_spc24 | 0.2 | 0.3 | 0.4 | 0.6 | -0.6 | 0.4 | -0.5 | 0.5 | -0.6 | 0.6 | 0.6 | -0.5 | 0.5 | 0.4 | 0.5 | 0.2 | -0.5 | 0.5 | 0.3 |
tautz: manual_spc4 | 0.4 | 0.5 | 0.6 | 0.7 | -0.7 | 0.8 | -0.8 | 0.8 | -0.8 | 0.8 | 0.5 | -0.7 | 0.7 | 0.7 | 0.7 | 0.6 | -0.8 | 0.8 | 0.7 |
tautz: manual_mpc9 | 1.0 | 1.3 | 1.7 | 1.3 | -1.3 | 1.0 | -1.2 | 1.2 | -1.0 | 1.0 | 1.1 | -1.3 | 1.3 | 1.1 | 1.1 | 1.1 | -1.2 | 1.2 | 1.0 |
tautz: manual_spc2 | 2.7 | 3.6 | 4.8 | 1.9 | -1.9 | 1.8 | -1.8 | 1.8 | -2.0 | 2.0 | 1.8 | -1.9 | 1.9 | 1.7 | 2.0 | 2.2 | -1.8 | 1.8 | 2.0 |
tautz: manual_spc13 | 0.0 | 0.1 | 0.3 | 0.3 | -0.3 | -0.1 | 0.2 | -0.2 | 0.2 | -0.2 | 0.1 | -0.2 | 0.2 | -0.2 | 0.4 | 0.5 | 0.2 | -0.2 | -0.3 |
tautz: manual_mpc19 | 0.0 | 0.0 | 0.2 | -0.3 | 0.3 | -0.4 | 0.0 | -0.0 | 0.0 | -0.0 | -0.2 | 0.2 | -0.2 | -0.2 | -0.4 | -0.3 | 0.0 | -0.0 | -0.1 |
tautz: manual_spc10 | 0.1 | 0.1 | 0.2 | -0.4 | 0.4 | 0.0 | -0.2 | 0.2 | -0.2 | 0.2 | 0.0 | 0.4 | -0.4 | 0.3 | -0.2 | -0.3 | -0.2 | 0.2 | 0.2 |
tautz: manual_spc11 | 1.3 | 1.6 | 2.4 | 1.5 | -1.5 | 1.1 | -1.1 | 1.1 | -1.3 | 1.3 | 1.3 | -1.5 | 1.5 | 1.2 | 1.2 | 1.3 | -1.1 | 1.1 | 1.1 |
tautz: manual_spc23 | 2.0 | 3.0 | 3.2 | 1.7 | -1.7 | 1.7 | -1.8 | 1.8 | -1.8 | 1.8 | 1.6 | -1.7 | 1.7 | 1.8 | 1.7 | 1.7 | -1.8 | 1.8 | 1.8 |
tautz: manual_spc6 | 0.0 | 0.1 | 0.2 | 0.3 | -0.3 | 0.3 | -0.2 | 0.2 | -0.1 | 0.1 | -0.3 | -0.3 | 0.3 | 0.1 | -0.1 | -0.3 | -0.2 | 0.2 | 0.4 |
tautz: manual_spc20 | 1.9 | 2.5 | 3.1 | 1.3 | -1.3 | 1.6 | -1.7 | 1.7 | -1.6 | 1.6 | 1.6 | -1.4 | 1.4 | 1.6 | 1.6 | 1.7 | -1.7 | 1.7 | 1.8 |
tautz: manual_mpc17 | 0.5 | 0.7 | 1.0 | 0.9 | -0.9 | 0.8 | -0.8 | 0.8 | -0.9 | 0.9 | 1.0 | -0.9 | 0.9 | 0.8 | 0.7 | 0.7 | -0.8 | 0.8 | 0.8 |
tautz: manual_mpc2 | 1.3 | 1.5 | 1.9 | -1.2 | 1.2 | -1.4 | 1.2 | -1.2 | 1.2 | -1.2 | -1.2 | 1.3 | -1.3 | -1.3 | -1.3 | -1.3 | 1.2 | -1.2 | -1.2 |
tautz: manual_spc1 | 0.1 | 0.1 | 0.3 | -0.2 | 0.2 | 0.1 | 0.2 | -0.2 | 0.3 | -0.3 | -0.4 | 0.2 | -0.2 | -0.3 | -0.5 | -0.5 | 0.2 | -0.2 | -0.3 |
tautz: manual_spc16 | 0.2 | 0.3 | 0.5 | 0.7 | -0.7 | 0.6 | -0.3 | 0.3 | -0.4 | 0.4 | 0.4 | -0.6 | 0.6 | 0.3 | 0.5 | 0.6 | -0.4 | 0.4 | 0.5 |
tautz: manual_mpc13 | 7.9 | 10.2 | 11.4 | 3.4 | -3.4 | 3.0 | -3.1 | 3.1 | -3.1 | 3.1 | 3.1 | -3.3 | 3.3 | 2.9 | 3.4 | 3.3 | -3.1 | 3.1 | 3.1 |
tautz: manual_spc5 | 1.4 | 1.9 | 2.7 | -1.4 | 1.4 | -1.6 | 1.4 | -1.4 | 1.4 | -1.4 | -0.8 | 1.5 | -1.5 | -1.3 | -1.2 | -1.0 | 1.4 | -1.4 | -1.5 |
tautz: manual_spc3 | 2.1 | 2.6 | 2.9 | 1.7 | -1.7 | 1.6 | -1.6 | 1.6 | -1.6 | 1.6 | 1.5 | -1.7 | 1.7 | 1.6 | 1.5 | 1.5 | -1.6 | 1.6 | 1.7 |
tautz: manual_mpc6 | 0.4 | 0.5 | 0.7 | 0.8 | -0.8 | 0.7 | -0.7 | 0.7 | -0.8 | 0.8 | 0.6 | -0.8 | 0.8 | 0.6 | 0.6 | 0.4 | -0.7 | 0.7 | 0.8 |
tautz: manual_spc18 | 0.4 | 0.5 | 1.1 | 0.4 | -0.4 | 0.5 | -0.8 | 0.8 | -0.8 | 0.8 | 1.0 | -0.4 | 0.4 | 0.9 | 0.8 | 0.9 | -0.8 | 0.8 | 0.7 |
tautz: manual_mpc11 | 0.1 | 0.1 | 0.2 | -0.5 | 0.5 | -0.1 | 0.1 | -0.1 | -0.0 | 0.0 | -0.2 | 0.5 | -0.5 | -0.1 | -0.2 | -0.3 | 0.1 | -0.1 | -0.3 |
tautz: manual_spc19 | 1.3 | 1.8 | 2.3 | 1.2 | -1.2 | 1.4 | -1.4 | 1.4 | -1.4 | 1.4 | 1.5 | -1.3 | 1.3 | 1.5 | 1.3 | 1.2 | -1.4 | 1.4 | 1.4 |
tautz: manual_mpc8 | 0.0 | 0.0 | 0.0 | -0.0 | 0.0 | 0.1 | -0.1 | 0.1 | -0.0 | 0.0 | -0.0 | 0.1 | -0.1 | 0.2 | -0.1 | -0.1 | -0.1 | 0.1 | 0.1 |
tautz: manual_mpc1 | 0.8 | 1.0 | 1.4 | -1.1 | 1.1 | -1.0 | 0.9 | -0.9 | 1.1 | -1.1 | -1.0 | 1.0 | -1.0 | -0.8 | -1.1 | -1.2 | 0.9 | -0.9 | -1.0 |
Sum of all infusions from LGA sessions | 1.7 | 2.0 | 2.5 | -1.6 | 1.6 | -1.5 | 1.5 | -1.5 | 1.5 | -1.5 | -1.2 | 1.5 | -1.5 | -1.3 | -1.3 | -1.1 | 1.3 | -1.3 | -1.3 |
Ambulatory time at time1 of open field | 0.3 | 0.4 | 0.7 | -0.5 | 0.5 | -0.5 | 0.7 | -0.7 | 0.5 | -0.5 | -0.9 | 0.4 | -0.4 | -0.9 | -0.6 | -0.6 | 0.6 | -0.6 | -0.7 |
dd_expon_k | 0.4 | 0.4 | 0.8 | 0.8 | -0.8 | 0.5 | -0.6 | 0.6 | -0.3 | 0.3 | 0.9 | -0.5 | 0.5 | 0.7 | 0.8 | 0.9 | -0.5 | 0.5 | 0.5 |
Delay discounting AUC-traditional | 0.3 | 0.3 | 0.6 | -0.7 | 0.7 | -0.3 | 0.5 | -0.5 | 0.2 | -0.2 | -0.7 | 0.4 | -0.4 | -0.6 | -0.7 | -0.8 | 0.4 | -0.4 | -0.4 |
The total number of resting periods in time1 | 0.1 | 0.2 | 0.4 | 0.3 | -0.3 | 0.4 | -0.5 | 0.5 | -0.4 | 0.4 | 0.2 | -0.3 | 0.3 | 0.6 | 0.2 | 0.1 | -0.6 | 0.6 | 0.5 |
Area under the delay curve | 0.3 | 0.3 | 0.6 | -0.7 | 0.7 | -0.3 | 0.5 | -0.5 | 0.2 | -0.2 | -0.7 | 0.4 | -0.4 | -0.6 | -0.7 | -0.8 | 0.4 | -0.4 | -0.4 |
punishment | 0.8 | 0.9 | 1.3 | 1.0 | -1.0 | 1.1 | -1.1 | 1.1 | -0.6 | 0.6 | 0.8 | -1.0 | 1.0 | 1.0 | 0.9 | 0.9 | -1.1 | 1.1 | 1.1 |
runstartmale1 | 0.6 | 0.6 | 1.2 | 0.8 | -0.8 | 1.0 | -0.6 | 0.6 | -0.5 | 0.5 | 1.1 | -0.8 | 0.8 | 1.0 | 0.6 | 0.6 | -0.8 | 0.8 | 0.9 |
locomotor2 | 1.6 | 1.9 | 3.0 | 1.2 | -1.2 | 1.3 | -1.4 | 1.4 | -1.3 | 1.3 | 1.2 | -1.3 | 1.3 | 1.3 | 1.6 | 1.7 | -1.5 | 1.5 | 1.5 |
Weight adjusted by age | 0.9 | 1.0 | 1.3 | -0.9 | 0.9 | -1.1 | 1.1 | -1.1 | 0.9 | -0.9 | -1.0 | 0.9 | -0.9 | -0.9 | -0.9 | -0.9 | 1.1 | -1.1 | -1.1 |
Liver selenium concentration | 0.2 | 0.2 | 0.5 | 0.6 | -0.6 | 0.7 | -0.3 | 0.3 | -0.4 | 0.4 | 0.1 | -0.6 | 0.6 | 0.3 | 0.3 | 0.4 | -0.3 | 0.3 | 0.4 |
Liver rubidium concentration | 0.1 | 0.2 | 0.4 | -0.6 | 0.6 | -0.0 | 0.3 | -0.3 | 0.3 | -0.3 | -0.4 | 0.6 | -0.6 | -0.4 | -0.1 | 0.2 | 0.4 | -0.4 | -0.3 |
Liver iron concentration | 1.4 | 1.7 | 2.6 | -1.3 | 1.3 | -1.1 | 1.3 | -1.3 | 1.3 | -1.3 | -1.1 | 1.3 | -1.3 | -1.2 | -1.5 | -1.6 | 1.3 | -1.3 | -1.3 |
Liver cobalt concentration | 0.0 | 0.0 | 0.1 | 0.1 | -0.1 | 0.1 | -0.2 | 0.2 | -0.0 | 0.0 | 0.2 | -0.1 | 0.1 | 0.2 | 0.0 | -0.1 | -0.2 | 0.2 | 0.2 |
Liver cadmium concentration | 0.7 | 0.7 | 1.0 | -0.9 | 0.9 | -0.8 | 0.8 | -0.8 | 1.0 | -1.0 | -1.0 | 0.9 | -0.9 | -0.8 | -0.8 | -0.7 | 0.8 | -0.8 | -0.8 |
Liver zinc concentration | 0.0 | 0.0 | 0.2 | 0.3 | -0.3 | 0.2 | 0.0 | -0.0 | 0.0 | -0.0 | 0.3 | -0.3 | 0.3 | -0.1 | 0.3 | 0.4 | 0.0 | -0.0 | -0.1 |
Liver sodium concentration | 1.0 | 1.1 | 1.6 | 1.3 | -1.3 | 1.0 | -0.8 | 0.8 | -0.9 | 0.9 | 1.2 | -1.3 | 1.3 | 0.8 | 1.1 | 1.2 | -0.8 | 0.8 | 0.8 |
Liver manganese concentration | 2.3 | 2.7 | 3.5 | -1.7 | 1.7 | -1.6 | 1.7 | -1.7 | 1.7 | -1.7 | -1.5 | 1.7 | -1.7 | -1.7 | -1.4 | -1.2 | 1.7 | -1.7 | -1.9 |
For each tested trait, stats based on TWAS chi2 (squared Z-score) for the above models are shown. Avg chi2 ratio is the mean chi2 across all models for this gene, divided by the mean chi2 across all models for all genes. Avg chi2 is the mean chi2 across all models for this gene. Max chi2 is the highest chi2 across all models for this gene.
The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.