Zfp513

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 BLA gene expression ENSRNOG00000005298 0.09 0.08 3.2e-04 0.06 0.06 0.03 0.06 2.5e-04 2.6e-04 6.3e-03 2.4e-04
2 NAcc gene expression ENSRNOG00000005298 0.1 0.14 1.6e-04 0.05 0.05 0.04 0.05 8.0e-05 1.2e-04 3.8e-04 9.3e-05
3 PL gene expression ENSRNOG00000005298 0.06 0.06 1.6e-03 0.03 0.03 0.02 0.03 1.4e-03 3.5e-03 6.1e-03 1.8e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strong Z-scores (below -2 or above 2): lower negative Z-scores are darker blue, higher positive Z-scores are darker red.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
BMI with tail0.41.31.41.11.21.2
BMI without tail0.20.50.80.40.90.8
Body weight1.97.98.82.62.83.0
Epididymis fat weight14.133.036.25.35.96.0
Glucose0.20.40.60.40.80.5
Heart weight9.914.215.43.83.93.6
Left kidney weight0.00.00.10.4-0.00.1
Right kidney weight1.03.04.52.11.41.6
Tail length0.10.40.50.40.70.7
Length with tail1.55.76.52.32.32.6
Length without tail0.71.61.91.41.11.3
Liver weight, left1.32.12.81.71.51.2
Liver weight, right9.515.816.44.13.93.9
Parametrial fat weight6.512.614.83.83.43.4
Retroperitoneal fat weight21.370.574.08.18.58.6
Intraocular pressure4.96.98.62.92.22.7
Extensor digitorum longus weight4.417.518.7-4.0-4.2-4.3
Soleus weight4.312.414.6-3.0-3.8-3.7
Tibialis anterior weight3.512.013.1-3.2-3.5-3.6
Tibia length2.67.28.32.62.92.6
Number of licking bursts0.30.30.40.5-0.5-0.6
Food consumed during 24 hour testing period0.20.20.4-0.0-0.4-0.7
Times rat made contact with spout1.92.23.0-1.1-1.7-1.6
Mean time between licks in bursts2.63.64.32.11.81.8
Mean num. licks in bursts0.20.20.5-0.7-0.3-0.1
Std. dev. time between licks in bursts0.20.30.60.80.40.3
Water consumed over 24 hours1.51.82.7-0.8-1.4-1.7
Indifference point 0 sec0.30.40.70.50.80.6
Indifference point AUC2.02.32.8-1.5-1.4-1.7
Indifference point function ln k0.00.00.00.20.20.2
Indifference point function log k0.00.00.00.20.20.2
Delay discounting total patch changes 0 sec0.20.30.40.50.70.4
Delay discounting total patch changes 12 sec0.71.01.20.91.10.9
Delay discounting total patch changes 18 sec0.00.00.10.00.3-0.1
Delay discounting total patch changes 24 sec0.91.11.70.91.31.0
Delay discounting total patch changes 6 sec0.00.00.1-0.10.3-0.0
Delay discounting time to switch 0 sec0.00.00.1-0.1-0.30.2
Delay discounting water rate 0 sec0.00.00.1-0.00.3-0.1
Delay discounting water rate 12 sec1.72.52.81.61.71.5
Delay discounting water rate 18 sec0.70.91.10.91.10.9
Delay discounting water rate 24 sec2.02.73.51.61.51.9
Delay discounting water rate 6 sec1.52.22.31.51.51.4
Locomotor activity0.20.20.60.70.10.4
Locomotor testing distance0.20.30.5-0.4-0.7-0.4
Locomotor testing rearing0.91.42.5-1.6-1.0-0.8
Light reinforcement 14.07.28.5-2.4-2.7-2.9
Light reinforcement 23.54.65.8-1.8-2.2-2.4
Reaction time number correct0.50.70.8-0.7-0.9-0.9
Reaction time mean minus median0.00.00.1-0.20.2-0.1
Reaction time mean minus median AUC0.00.00.10.10.30.0
Reaction time num false alarms0.20.30.40.0-0.7-0.6
Reaction time num false alarms AUC0.30.40.70.1-0.8-0.8
Reaction time trials correct on left0.50.70.8-0.7-0.9-0.9
Reaction time trials on left0.50.70.9-0.7-0.9-0.9
Reaction time mean1.11.51.71.31.31.1
Reaction time mean AUC0.91.11.41.11.20.9
Median of all reaction times1.21.72.21.51.31.1
Reaction time omissions0.10.20.3-0.3-0.3-0.6
Reaction time false alarm rate0.10.10.20.5-0.3-0.3
Reaction time premature initiation rate0.10.20.20.40.50.5
Reaction time premature initiations0.00.00.00.0-0.1-0.1
Std. dev. reaction times0.30.40.60.60.80.5
Reaction time trials completed0.50.70.9-0.7-0.9-0.9
Reaction time trials AUC0.71.01.1-0.9-1.1-1.0
Social response proportion0.30.40.60.50.70.5
Social responses0.10.20.30.40.6-0.1
Social time0.70.91.80.61.40.7
Conditioned locomotion3.03.63.9-1.9-2.0-1.8
Cocaine response after cond. corrected0.70.81.5-0.5-1.2-0.8
Cocaine response after cond. not corrected1.82.03.1-0.9-1.8-1.4
Cocaine response before conditioning1.51.82.4-1.3-1.1-1.6
Saline control response0.50.71.0-0.8-0.8-1.0
Condit. Reinf. active minus inactive responses4.55.66.2-2.5-2.3-2.3
Condit. Reinf. active-inactive response ratio1.11.21.2-1.1-1.1-1.1
Condit. Reinf. active responses3.85.35.9-2.4-2.2-2.3
Condit. Reinf. inactive responses2.12.62.7-1.6-1.6-1.6
Condit. Reinf. lever presses2.02.73.3-1.4-1.8-1.7
Condit. Reinf. lever reinforcers received3.44.75.5-2.3-2.0-2.1
Pavlov. Cond. lever latency1.72.32.71.31.51.6
Pavlov. Cond. magazine entry latency0.30.30.7-0.5-0.3-0.8
Pavlov. Cond. change in total contacts0.70.91.3-0.6-1.0-1.2
Pavlov. Cond. index score1.01.31.9-1.0-1.0-1.4
Pavlov. Cond. latency score1.01.21.8-1.0-1.0-1.3
Pavlov. Cond. lever contacts0.81.11.5-0.8-1.2-1.2
Pavlov. Cond. magazine entry number0.10.10.20.20.20.5
Pavlov. Cond. intertrial magazine entries3.03.94.61.81.92.1
Pavlov. Cond. lever-magazine prob. diff.0.71.01.5-0.8-0.9-1.2
Pavlov. Cond. response bias1.62.22.8-1.2-1.5-1.7
Conditioned reinforcement - actives0.90.92.1-1.5-0.3-0.7
Conditioned reinforcement - inactives3.13.54.7-2.0-1.4-2.2
Conditioned locomotion0.50.61.4-1.20.7-0.0
Intermittent access intake day 1-15 change0.00.00.1-0.10.0-0.2
Intermittent access intake escalation0.00.00.10.20.30.0
Intermittent access intake escalation 20.40.40.60.80.70.5
Intermitt. access day 1 inactive lever presses0.10.10.2-0.4-0.1-0.4
Intermitt. access day 15 inactive lever presses7.17.89.6-3.1-2.1-3.0
Intermitt. access escalation Index0.30.30.40.40.60.5
Intermittent access day 1 total infusions5.66.47.4-2.6-2.2-2.7
Intermittent access day 15 total infusions2.12.43.1-1.6-1.2-1.8
Intermittent access terminal intake (last 3 days)1.61.82.3-1.5-1.1-1.4
Intermittent access total infusions2.32.53.0-1.7-1.2-1.7
Intermittent access day 1 locomotion2.32.32.5-1.5-1.5-1.6
Intermittent access day 15 total locomotion0.80.91.5-0.9-0.6-1.2
Intermittent access total locomotion0.40.40.7-0.8-0.2-0.8
Intermittent access standard deviation0.10.10.3-0.5-0.0-0.3
Cocaine induced anxiety0.30.30.6-0.6-0.3-0.8
Post-drug Anxiety0.80.91.61.30.80.7
Baseline Anxiety1.41.52.21.50.81.3
Lifetime Intake3.23.54.6-2.1-1.4-2.0
Incentive Sensitization - Responses0.10.10.10.10.30.3
Incentive Sensitization - Breakpoint0.20.20.30.30.60.4
Progressive ratio test 1 active lever presses1.71.82.8-1.7-0.6-1.5
Progressive ratio test 1 breakpoint1.51.62.5-1.6-0.5-1.4
Progressive ratio test 1 inactive lever presses3.63.97.0-2.6-1.1-1.9
Progressive ratio test 2 active lever presses0.10.10.3-0.60.2-0.2
Progressive ratio test 2 breakpoint0.20.20.5-0.70.1-0.3
Progressive ratio test 2 inactive lever presses1.92.23.4-1.8-0.8-1.6
Total sessions with >9 infusions2.52.74.7-2.2-0.9-1.6
Short access day 1 total inactive lever presses5.05.67.7-2.3-1.9-2.8
Short access day 10 total inactive lever presses1.11.21.6-1.1-0.9-1.3
Short access day 1 total infusions4.75.07.4-2.7-1.5-2.3
Short access day 10 total infusions4.14.55.5-2.3-1.7-2.2
Short access total infusions2.83.14.9-2.2-1.2-1.8
Short access day 1 locomotion6.56.99.6-3.1-2.1-2.6
Short access day 10 total locomotion0.60.70.9-0.9-0.6-1.0
Short access total locomotion0.60.61.0-1.0-0.3-0.8
Compulsive drug intake0.40.40.91.0-0.00.5
One hour access (0.3 mA shock)1.72.02.5-1.4-1.3-1.6
One hour access (shock baseline)1.82.12.8-1.7-1.0-1.5
Number of responses in last shaping day0.40.40.8-0.9-0.2-0.5
Context. condit. distance diff. score0.00.00.10.20.10.3
Locomotion velocity, session 10.00.10.10.30.30.1
Locomotion distance, session 11.62.12.9-0.9-1.7-1.6
Locomotion velocity, session 20.30.30.50.70.40.5
Locomotion distance, session 20.00.00.00.20.1-0.0
Locomotion velocity, session 30.70.81.3-1.1-0.7-0.7
Locomotion distance, session 30.90.91.2-0.9-0.9-1.1
Stereotopy head waving bouts, day 31.92.33.1-1.8-1.4-1.4
Stereotopy head waving duration, day 30.20.20.5-0.7-0.3-0.2
Locomotion velocity, session 70.90.91.2-1.0-0.8-1.1
Locomotion distance, session 70.00.00.0-0.00.2-0.1
Stereotopy head waving bouts, day 70.00.00.00.1-0.00.0
Stereotopy head waving duration, day 70.40.50.6-0.8-0.7-0.7
Locomotion velocity, session 80.10.10.2-0.5-0.1-0.3
Locomotion distance, session 80.10.20.3-0.2-0.5-0.5
Degree of sensitization distance1.01.01.11.01.11.0
Degree of sensitization stereotypy0.10.10.30.50.20.3
Condit. Reinf. active minus inactive responses0.50.60.70.80.60.8
Condit. Reinf. active-inactive response ratio0.50.50.70.60.70.9
Condit. Reinf. active responses0.20.30.5-0.1-0.7-0.6
Condit. Reinf. inactive responses1.61.92.4-0.9-1.5-1.6
Incentive salience index mean0.00.10.10.0-0.3-0.3
Condit. Reinf. lever presses0.70.91.3-0.5-1.1-1.1
Time in familiar zone, hab. session 11.00.91.20.81.10.9
Time in novel zone, hab. session 10.40.40.80.30.70.9
Total zone transitions, hab. session 10.10.10.1-0.0-0.4-0.3
Total locomotion distance, hab. session 10.10.10.2-0.3-0.3-0.5
Locomotion velocity, hab. session 10.91.31.7-0.8-1.2-1.3
Time in familiar zone, hab. session 20.00.00.00.00.20.2
Time in novel zone, hab. session 20.30.30.40.50.50.6
Total zone transitions, hab. session 20.10.10.30.1-0.5-0.4
Total locomotion distance, hab. session 20.20.30.4-0.1-0.6-0.7
Locomotion velocity, hab. session 20.40.60.8-0.3-0.9-0.9
Novel to familiar place preference ratio0.90.91.31.10.70.9
Novelty place preference1.41.51.81.31.01.2
Time in novel zone, NPP test1.61.71.91.31.21.4
Total zone transitions, NPP test1.21.82.0-1.2-1.4-1.4
Total locomotion distance, NPP test1.92.63.0-1.5-1.6-1.7
Locomotion velocity, NPP test3.14.55.1-1.8-2.2-2.3
Pavlov. Cond. lever latency1.72.12.91.21.41.7
Pavlov. Cond. magazine entry latency0.00.00.0-0.1-0.0-0.1
Pavlov. Cond. change in total contacts0.00.00.1-0.0-0.2-0.3
Pavlov. Cond. index score0.60.81.2-0.6-0.9-1.1
Pavlov. Cond. latency score0.60.71.2-0.6-0.8-1.1
Pavlov. Cond. lever contacts1.01.21.8-0.7-1.2-1.3
Pavlov. Cond. magazine entry number0.30.40.60.50.60.8
Pavlov. Cond. intertrial magazine entries1.51.82.1-1.2-1.4-1.4
Pavlov. Cond. lever-magazine prob. diff.1.41.82.3-1.1-1.4-1.5
Pavlov. Cond. response bias1.31.62.0-1.1-1.3-1.4
Bone: apparent density5.08.39.7-2.5-3.0-3.1
Bone surface2.34.05.1-1.6-2.0-2.3
Bone volume2.44.15.1-1.7-2.1-2.3
Bone: connectivity density4.97.88.8-2.4-2.9-3.0
Bone: cortical apparent density0.40.50.7-0.4-0.8-0.8
Bone: cortical area0.20.30.5-0.3-0.6-0.7
Bone: cortical porosity1.61.72.4-1.5-1.1-1.3
Bone: cortical porosity1.31.41.7-1.3-1.0-1.2
Bone: cortical thickness0.10.20.50.70.20.1
Bone: cortical thickness1.41.72.0-1.0-1.4-1.4
Bone: cortical tissue density0.30.30.5-0.3-0.6-0.7
Bone: elastic displacement1.01.11.3-1.1-1.1-0.9
Bone: elastic work1.21.62.0-1.2-1.4-1.2
Bone: endosteal estimation0.40.80.9-0.9-0.8-1.0
Bone: endosteal perimeter0.10.30.3-0.5-0.5-0.5
Bone: final force0.00.10.1-0.1-0.3-0.2
Bone: final moment0.10.10.1-0.2-0.4-0.3
Bone: marrow area0.40.91.0-0.9-0.9-1.0
Bone: maximum diameter0.81.51.9-1.0-1.2-1.4
Bone: maximum force0.00.00.00.00.0-0.0
Bone: maximum moment0.00.00.0-0.1-0.1-0.1
Bone: minimum diameter0.10.20.30.40.50.3
Bone: periosteal estimation0.51.01.4-0.8-1.0-1.2
Bone: periosteal perimeter0.20.30.4-0.2-0.6-0.6
Bone: post-yield work0.30.40.5-0.7-0.6-0.6
Bone: stiffness0.00.10.10.30.30.2
Bone: tissue strength0.90.81.11.00.71.0
Bone: trabecular number3.96.17.2-2.2-2.5-2.7
Bone: trabecular spacing3.03.84.71.91.82.2
Bone: trabecular thickness0.60.71.0-0.8-0.8-1.0
Bone: trabecular tissue density0.10.10.2-0.4-0.4-0.4
Breakpoint value in progressive ratio session1.41.51.8-1.3-1.4-1.0
Distance traveled before self-admin0.00.00.10.3-0.10.2
Distance traveled after self-admin1.11.31.61.30.81.2
Delta time in closed arm before/after self-admin0.10.10.10.30.00.3
Delta time in open arm before/after self-admin0.40.30.6-0.8-0.4-0.5
Diff in mean of infusions in LGA sessions0.30.30.4-0.5-0.5-0.6
Extinction: sum of active levers before priming0.60.61.0-0.5-1.0-0.8
Active lever presses in extinction session 60.60.51.6-1.2-0.2-0.2
Delta distance traveled before/after self-admin1.51.61.81.11.41.3
Delta ambulatory time before/after self-admin0.30.30.40.50.70.5
Time in closed arm before self-admin0.50.60.70.70.80.7
Time in closed arm after self-admin1.41.52.00.91.31.4
Time in open arm before self-admin0.20.20.30.4-0.5-0.5
Time in open arm after self-admin2.22.43.1-1.1-1.7-1.8
Sum of active levers in priming session hrs 5-61.01.01.4-0.6-1.2-1.1
Time to tail flick, vehicle, before self-admin2.22.22.81.31.71.4
Time to tail flick, vehicle, after self-admin4.54.85.41.92.32.3
Time to tail flick, test, before self-admin0.60.60.7-0.9-0.8-0.7
Time to tail flick, test, after self-admin0.10.10.20.30.40.0
Delta time to tail flick, vehicle, before/after SA0.10.10.10.10.20.4
Delta time to tail flick, test, before/after SA0.40.40.7-0.3-0.5-0.9
Ambulatory time before self-admin0.10.10.20.0-0.4-0.1
Ambulatory time after self-admin0.90.91.31.00.71.1
Total heroin consumption3.13.84.4-1.6-2.1-2.1
Area under the delay curve0.30.30.80.2-0.9-0.3
Delay disc. indifference point, 0s delay2.93.15.32.31.31.5
Delay disc. indifference point, 16s delay0.60.61.5-0.1-1.2-0.6
Delay disc. indifference point, 2s delay0.30.30.50.70.30.5
Delay disc. indifference point, 24s delay2.62.55.4-0.7-2.3-1.3
Delay disc. indifference point, 4s delay0.00.00.10.2-0.3-0.1
Delay disc. indifference point, 8s delay0.30.30.90.0-0.9-0.4
Delay discount exponential model param0.60.61.50.11.20.5
Delay discount hyperbolic model param0.50.51.30.21.10.5
Fecal boli incidents, locomotor time 10.20.20.4-0.6-0.4-0.2
Change in fecal boli incidents, locomotor task4.24.04.12.02.02.0
Time >=10cm from walls, locomotor time 10.10.10.10.3-0.30.3
Bouts of movement, locomotor time 11.92.12.6-1.3-1.6-1.4
Total resting periods, locomotor time 12.22.42.7-1.5-1.7-1.5
Rest time, locomotor task time 10.10.10.3-0.5-0.1-0.1
Distance moved, locomotor task time 11.11.21.51.20.81.2
Vertical activity count, locomotor time 10.60.61.01.00.30.8
Time >=10cm from walls, locomotor time 20.10.10.2-0.4-0.1-0.4
Bouts of movement, locomotor time 20.30.30.40.70.10.6
Total resting periods, locomotor time 20.10.10.10.3-0.00.3
Rest time, locomotor task time 21.61.92.2-1.2-1.4-1.5
Distance moved, locomotor task time 20.91.01.11.01.01.0
Vertical activity count, locomotor time 20.60.70.90.61.00.8
Weight adjusted by age0.10.10.1-0.20.3-0.0
Seeking ratio, delayed vs. immediate footshock0.30.30.7-0.30.80.3
Locomotion in novel chamber1.21.52.50.61.21.6
Locomotion in novel chamber post-restriction2.02.33.41.21.51.9
Progressive ratio0.10.10.4-0.60.2-0.1
Food seeking constrained by brief footshock4.55.58.3-2.9-1.9-2.2
Seeking ratio, punishment vs. effort0.60.70.9-0.6-1.0-0.9
Run reversals in cocaine runway, females0.10.10.10.4-0.1-0.0
Run reversals in cocaine runway, males0.20.20.5-0.4-0.7-0.2
Latency to leave start box in cocaine runway0.40.40.5-0.7-0.5-0.6
Latency to leave start box in cocaine runway, F0.60.71.1-0.6-0.7-1.0
Latency to leave start box in cocaine runway, M0.50.41.1-1.1-0.3-0.3
Cd content in liver0.00.00.00.0-0.00.0
Co content in liver5.36.27.1-2.2-2.6-2.7
Cu content in liver0.00.00.1-0.3-0.2-0.1
Fe content in liver0.10.10.2-0.40.30.3
K content in liver0.20.20.40.60.20.3
Mg content in liver0.30.30.50.70.40.5
Mn content in liver0.50.60.8-0.9-0.7-0.7
Na content in liver0.30.30.3-0.6-0.5-0.5
Rb content in liver0.00.00.10.10.10.3
Se content in liver0.40.50.70.40.90.8
Sr content in liver0.20.20.50.70.10.2
Zn content in liver1.51.71.81.31.21.3