Btbd10

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 IL mRNA stability Btbd10 0.14 0.08 4.0e-03 0.11 0.12 0.1 0.11 1.4e-03 1.0e-03 2.1e-03 1.1e-03
2 BLA isoform ratio NM_001399402.1 0.06 0.04 6.7e-03 0.02 0.04 0.04 0.03 2.1e-02 4.1e-03 5.4e-03 1.7e-02
3 Adipose mRNA stability Btbd10 0.03 0.02 6.0e-03 0.01 0.01 -0 0.01 1.9e-02 1.3e-02 7.1e-01 2.2e-02

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
Bone: apparent density0.10.20.6-0.10.2-0.8
Area under the delay curve0.00.00.00.2-0.10.1
BMI with tail4.515.429.44.0-5.40.6
BMI without tail2.26.712.22.8-3.50.4
Body weight0.83.67.31.8-2.7-0.5
Weight adjusted by age0.81.22.90.5-0.71.7
Bone surface0.00.10.10.2-0.0-0.4
Bone volume0.20.30.60.7-0.7-0.2
Breakpoint value in progressive ratio session0.00.00.00.00.20.0
Number of licking bursts0.40.71.5-0.20.61.2
Context. condit. distance diff. score0.20.30.40.6-0.30.6
Locomotion velocity, session 10.50.60.91.0-0.40.8
Locomotion distance, session 14.65.87.42.6-2.71.8
Locomotion velocity, session 20.30.40.60.8-0.40.5
Locomotion distance, session 25.77.910.93.1-3.31.9
Locomotion velocity, session 30.10.10.3-0.1-0.30.5
Locomotion distance, session 30.10.10.2-0.40.10.4
Stereotopy head waving bouts, day 31.31.63.40.7-0.91.9
Stereotopy head waving duration, day 30.60.71.50.6-0.51.2
Locomotion velocity, session 70.10.10.30.10.2-0.6
Locomotion distance, session 70.30.30.6-0.50.8-0.4
Stereotopy head waving bouts, day 70.60.60.9-0.61.00.8
Stereotopy head waving duration, day 70.20.30.40.6-0.20.6
Locomotion velocity, session 80.70.92.00.10.71.4
Locomotion distance, session 82.94.35.42.3-2.21.6
Degree of sensitization distance0.30.30.70.9-0.30.3
Degree of sensitization stereotypy0.20.30.6-0.40.80.1
Conditioned locomotion0.30.30.5-0.5-0.4-0.7
Cocaine response after cond. corrected0.10.20.4-0.20.3-0.7
Cocaine response after cond. not corrected0.91.02.9-0.3-0.2-1.7
Cocaine response before conditioning0.91.02.50.0-0.8-1.6
Saline control response0.20.30.4-0.60.6-0.3
Bone: connectivity density0.30.41.2-0.10.1-1.1
Bone: cortical apparent density2.12.94.6-1.82.1-0.9
Bone: cortical area0.60.91.41.2-1.2-0.0
Bone: cortical porosity0.70.81.4-1.20.2-0.9
Bone: cortical porosity1.92.13.6-1.91.2-1.1
Bone: cortical thickness0.71.11.61.3-1.3-0.0
Bone: cortical thickness0.40.50.80.9-0.8-0.1
Bone: cortical tissue density2.12.94.5-1.82.1-0.9
Condit. Reinf. active minus inactive responses0.00.00.1-0.2-0.30.1
Condit. Reinf. active-inactive response ratio0.10.10.2-0.30.2-0.4
Condit. Reinf. active responses0.10.20.5-0.7-0.20.1
Condit. Reinf. inactive responses0.20.30.7-0.1-0.80.2
Incentive salience index mean0.50.61.3-0.70.2-1.1
Condit. Reinf. lever presses1.41.93.5-1.30.8-1.9
Condit. Reinf. active minus inactive responses1.52.03.41.2-1.11.8
Condit. Reinf. active-inactive response ratio0.20.30.40.4-0.40.6
Condit. Reinf. active responses1.42.03.01.1-1.31.7
Condit. Reinf. inactive responses0.30.40.80.5-0.90.5
Condit. Reinf. lever presses1.41.93.21.5-1.80.6
Condit. Reinf. lever reinforcers received0.91.32.20.8-0.91.5
Conditioned reinforcement - actives2.03.56.0-2.41.3-1.7
Conditioned reinforcement - inactives0.10.20.4-0.60.00.3
Conditioned locomotion2.02.64.6-2.10.9-1.5
Patch foraging indifference point 0 sec0.20.41.1-0.21.10.3
Patch foraging indifference point AUC0.81.11.51.2-1.00.9
Delay disc. indifference point, 0s delay0.00.00.1-0.0-0.10.3
Delay disc. indifference point, 16s delay0.40.40.8-0.60.90.2
Delay disc. indifference point, 2s delay0.00.00.10.1-0.2-0.1
Delay disc. indifference point, 24s delay0.50.61.0-0.80.2-1.0
Delay disc. indifference point, 4s delay0.60.61.10.7-0.51.0
Delay disc. indifference point, 8s delay0.70.81.21.1-1.00.5
Indifference point function ln k0.61.01.4-0.91.0-1.2
Indifference point function log k0.61.01.4-0.91.0-1.2
Patch foraging total patch changes 0 sec0.30.51.5-0.21.20.2
Patch foraging total patch changes 12 sec0.20.20.60.20.20.7
Patch foraging total patch changes 18 sec0.40.71.6-0.41.30.5
Patch foraging total patch changes 24 sec0.10.10.4-0.00.7-0.0
Patch foraging total patch changes 6 sec0.60.91.90.9-0.21.4
Patch foraging time to switch 0 sec0.51.01.6-1.31.0-0.5
Patch foraging water rate 0 sec0.40.92.1-0.71.4-0.4
Patch foraging water rate 12 sec0.91.93.81.9-1.30.3
Patch foraging water rate 18 sec0.20.30.80.90.2-0.4
Patch foraging water rate 24 sec1.11.63.41.8-1.10.5
Patch foraging water rate 6 sec1.62.34.5-1.22.1-1.0
Seeking ratio, delayed vs. immediate footshock0.40.51.0-0.0-0.7-1.0
Distance traveled before self-admin0.40.51.3-1.10.1-0.4
Distance traveled after self-admin0.81.01.5-1.10.2-1.2
Extensor digitorum longus weight0.83.04.72.2-1.9-0.9
Bone: elastic displacement0.10.10.3-0.1-0.10.5
Bone: elastic work0.50.60.80.9-0.80.6
Bone: endosteal estimation0.10.20.30.5-0.30.5
Bone: endosteal perimeter0.20.40.50.7-0.60.6
Epididymis fat weight0.31.01.91.4-1.10.0
Delta time in closed arm before/after self-admin0.10.10.20.3-0.40.2
Delta time in open arm before/after self-admin0.70.71.40.7-0.41.2
Diff in mean of infusions in LGA sessions0.20.30.5-0.50.70.5
Delay discount exponential model param0.00.00.1-0.30.1-0.1
Extinction: sum of active levers before priming0.30.30.8-0.1-0.9-0.3
Active lever presses in extinction session 60.00.00.10.1-0.0-0.3
Bone: final force0.20.30.80.4-0.90.1
Bone: final moment0.30.51.10.7-1.00.4
Food consumed during 24 hour testing period0.00.00.10.2-0.2-0.2
Glucose0.20.30.50.40.70.4
Heart weight0.91.42.21.5-0.41.4
Delay discount hyperbolic model param0.00.00.0-0.20.1-0.1
Intermittent access intake day 1-15 change0.00.00.10.3-0.20.0
Intermittent access intake escalation0.00.10.10.4-0.10.1
Intermittent access intake escalation 20.30.40.60.8-0.60.4
Intermitt. access day 1 inactive lever presses0.20.91.2-1.10.8-0.9
Intermitt. access day 15 inactive lever presses0.10.20.5-0.0-0.10.7
Intermitt. access escalation Index0.30.40.80.4-0.5-0.9
Intermittent access day 1 total infusions2.54.07.5-2.71.8-1.1
Intermittent access day 15 total infusions1.01.53.0-1.71.0-0.7
Intermittent access terminal intake (last 3 days)1.11.53.1-1.70.7-0.9
Intermittent access total infusions3.23.77.1-2.71.5-1.4
Intermittent access day 1 locomotion3.94.98.5-2.92.3-1.0
Intermittent access day 15 total locomotion1.93.45.2-2.31.7-1.4
Intermittent access total locomotion3.94.68.6-2.92.0-1.1
Intermittent access standard deviation0.51.12.00.8-1.40.8
Left kidney weight0.63.04.61.6-2.1-1.4
Right kidney weight1.25.59.72.2-3.1-1.3
Cocaine induced anxiety0.10.10.3-0.5-0.1-0.1
Post-drug Anxiety0.30.40.5-0.60.70.4
Baseline Anxiety0.30.30.50.20.70.6
Tail length0.83.15.5-1.82.3-0.7
Length with tail0.41.72.9-1.31.7-0.6
Length without tail0.30.81.4-1.01.2-0.3
Times rat made contact with spout0.00.00.00.10.00.1
Lifetime Intake2.93.66.2-2.51.7-1.3
Liver weight, left1.83.08.0-0.80.6-2.8
Liver weight, right1.12.04.1-0.81.1-2.0
Locomotor activity0.61.01.80.8-0.61.4
Locomotor testing distance1.01.74.30.8-0.42.1
Locomotor testing rearing2.34.610.21.6-1.03.2
Locomotion in novel chamber2.93.75.8-1.71.6-2.4
Locomotion in novel chamber post-restriction0.91.53.5-0.21.01.9
Fecal boli incidents, locomotor time 13.04.35.1-1.82.2-2.2
Change in fecal boli incidents, locomotor task4.14.05.82.1-1.42.4
Time >=10cm from walls, locomotor time 10.70.82.30.2-0.11.5
Bouts of movement, locomotor time 10.30.40.60.8-0.1-0.7
Total resting periods, locomotor time 10.40.40.90.20.6-1.0
Rest time, locomotor task time 10.60.71.20.01.11.0
Distance moved, locomotor task time 10.20.30.4-0.6-0.5-0.3
Vertical activity count, locomotor time 10.10.20.50.2-0.70.4
Time >=10cm from walls, locomotor time 22.74.06.92.0-2.61.0
Bouts of movement, locomotor time 20.00.00.1-0.1-0.20.1
Total resting periods, locomotor time 20.00.00.0-0.2-0.10.1
Rest time, locomotor task time 21.21.52.91.0-0.71.7
Distance moved, locomotor task time 20.30.40.9-0.0-1.0-0.4
Vertical activity count, locomotor time 20.20.30.40.4-0.60.5
Light reinforcement 10.30.71.20.6-1.10.8
Light reinforcement 20.40.50.60.6-0.8-0.8
Bone: marrow area0.10.10.20.5-0.20.4
Bone: maximum diameter0.40.71.11.0-0.80.7
Bone: maximum force0.40.81.11.0-1.00.5
Bone: maximum moment0.61.11.51.2-1.20.7
Mean time between licks in bursts0.30.70.8-0.80.8-0.9
Mean num. licks in bursts0.30.51.00.3-0.6-1.0
Cd content in liver2.12.43.9-1.82.0-0.4
Co content in liver0.40.40.7-0.80.6-0.5
Cu content in liver0.20.20.50.0-0.7-0.3
Fe content in liver1.41.74.5-0.7-0.1-2.1
K content in liver1.21.12.8-0.3-0.7-1.7
Mg content in liver1.01.01.70.3-1.1-1.3
Mn content in liver1.01.12.7-0.6-0.6-1.7
Na content in liver0.50.61.00.5-1.00.7
Rb content in liver1.21.43.2-1.80.9-0.5
Se content in liver1.51.83.1-1.50.1-1.8
Sr content in liver2.21.92.71.6-0.81.5
Zn content in liver1.51.62.91.4-1.70.1
Bone: minimum diameter0.40.81.51.2-0.70.4
Time in familiar zone, hab. session 11.11.01.91.4-0.60.9
Time in novel zone, hab. session 10.20.20.5-0.70.2-0.0
Total zone transitions, hab. session 13.44.75.51.9-2.32.2
Total locomotion distance, hab. session 12.23.26.21.4-2.51.1
Locomotion velocity, hab. session 12.13.05.61.4-2.41.2
Time in familiar zone, hab. session 20.70.71.20.8-1.10.6
Time in novel zone, hab. session 20.00.00.10.2-0.2-0.3
Total zone transitions, hab. session 23.95.06.32.3-2.51.8
Total locomotion distance, hab. session 23.74.98.62.2-2.91.1
Locomotion velocity, hab. session 23.54.78.02.1-2.81.3
Novel to familiar place preference ratio0.20.20.6-0.8-0.3-0.2
Novelty place preference0.20.20.4-0.6-0.4-0.0
Time in novel zone, NPP test0.20.20.5-0.4-0.70.2
Total zone transitions, NPP test2.63.75.02.2-2.21.2
Total locomotion distance, NPP test4.66.311.22.7-3.30.9
Locomotion velocity, NPP test4.25.910.42.6-3.20.8
Intraocular pressure0.30.40.9-0.21.00.4
Delta distance traveled before/after self-admin0.10.20.30.10.4-0.6
Delta ambulatory time before/after self-admin0.40.50.8-0.30.8-0.9
Parametrial fat weight0.10.30.80.10.3-0.9
Pavlov. Cond. lever latency2.32.84.71.4-1.42.2
Pavlov. Cond. magazine entry latency0.60.71.11.0-1.0-0.2
Pavlov. Cond. change in total contacts3.94.24.9-1.92.0-2.2
Pavlov. Cond. index score0.81.12.4-0.60.6-1.5
Pavlov. Cond. latency score1.01.32.9-0.80.7-1.7
Pavlov. Cond. lever contacts1.61.94.4-0.80.8-2.1
Pavlov. Cond. magazine entry number0.30.41.20.1-0.21.1
Pavlov. Cond. intertrial magazine entries0.30.30.5-0.70.40.5
Pavlov. Cond. lever-magazine prob. diff.0.91.22.3-0.70.8-1.5
Pavlov. Cond. response bias0.40.51.3-0.10.2-1.2
Pavlov. Cond. lever latency4.35.98.1-2.92.8-1.3
Pavlov. Cond. magazine entry latency0.50.61.11.1-0.8-0.2
Pavlov. Cond. change in total contacts4.36.97.82.7-2.32.8
Pavlov. Cond. index score2.73.65.52.3-2.11.0
Pavlov. Cond. latency score2.63.55.52.3-2.00.9
Pavlov. Cond. lever contacts3.75.07.22.7-2.61.2
Pavlov. Cond. magazine entry number1.62.02.7-1.61.4-1.2
Pavlov. Cond. intertrial magazine entries0.60.92.2-0.8-0.1-1.5
Pavlov. Cond. lever-magazine prob. diff.2.63.45.52.3-2.00.9
Pavlov. Cond. response bias3.24.46.12.5-2.31.3
Time in closed arm before self-admin0.30.40.70.8-0.50.6
Time in closed arm after self-admin0.10.10.2-0.20.2-0.5
Time in open arm before self-admin1.41.62.1-1.40.9-1.3
Time in open arm after self-admin0.50.61.00.6-1.00.6
Bone: periosteal estimation0.30.71.11.1-0.90.1
Bone: periosteal perimeter1.01.82.61.6-1.31.0
Bone: post-yield work0.71.01.21.1-1.01.0
Progressive ratio test 1 active lever presses1.62.04.0-2.01.2-0.8
Progressive ratio test 1 breakpoint1.62.03.9-2.01.3-0.7
Progressive ratio test 1 inactive lever presses0.20.30.5-0.70.7-0.2
Progressive ratio test 2 active lever presses4.24.98.5-2.91.7-1.8
Progressive ratio test 2 breakpoint4.55.18.7-3.01.8-1.8
Progressive ratio test 2 inactive lever presses1.22.04.1-2.01.0-1.0
Incentive Sensitization - Responses1.82.63.8-1.91.2-1.6
Incentive Sensitization - Breakpoint2.32.94.3-2.11.3-1.7
Sum of active levers in priming session hrs 5-60.50.50.90.5-1.00.5
Progressive ratio0.50.81.2-1.11.0-0.6
Food seeking constrained by brief footshock0.70.91.30.9-1.1-0.7
Seeking ratio, punishment vs. effort0.91.31.91.4-1.4-0.1
Retroperitoneal fat weight0.20.91.71.3-0.9-0.2
Reaction time number correct2.24.35.22.3-1.82.1
Reaction time mean minus median1.43.46.01.9-2.50.7
Reaction time mean minus median AUC1.53.87.31.9-2.70.5
Reaction time num false alarms2.12.93.4-1.81.5-1.8
Reaction time num false alarms AUC2.43.84.2-2.01.8-2.0
Reaction time trials correct on left2.24.35.22.3-1.82.1
Reaction time trials on left2.54.75.72.4-1.92.2
Reaction time mean0.30.41.2-0.0-1.10.2
Reaction time mean AUC0.20.30.8-0.4-0.90.2
Median of all reaction times0.20.20.4-0.6-0.5-0.0
Reaction time omissions3.04.45.92.3-2.41.5
Reaction time false alarm rate5.57.58.8-2.82.4-3.0
Reaction time premature initiation rate1.62.23.21.4-1.8-1.2
Reaction time premature initiations2.24.06.12.4-2.50.1
Std. dev. reaction times0.71.43.10.9-1.70.4
Reaction time trials completed2.54.75.72.4-1.92.2
Reaction time trials AUC2.34.45.42.3-1.92.0
Run reversals in cocaine runway, females0.60.61.30.5-0.5-1.1
Run reversals in cocaine runway, males3.83.87.1-1.92.7-0.8
Latency to leave start box in cocaine runway0.10.20.40.10.70.1
Latency to leave start box in cocaine runway, F0.20.30.5-0.20.7-0.4
Latency to leave start box in cocaine runway, M0.10.10.30.10.6-0.0
Std. dev. time between licks in bursts0.20.20.6-0.30.2-0.8
Total sessions with >9 infusions0.91.11.6-1.30.7-1.1
Short access day 1 total inactive lever presses1.01.32.2-1.21.5-0.4
Short access day 10 total inactive lever presses0.20.40.50.7-0.70.5
Short access day 1 total infusions2.12.83.6-1.91.5-1.7
Short access day 10 total infusions3.44.46.4-2.52.0-1.6
Short access total infusions3.03.85.1-2.31.9-1.6
Short access day 1 locomotion2.73.34.5-2.11.7-1.6
Short access day 10 total locomotion0.00.00.0-0.0-0.20.0
Short access total locomotion1.92.33.5-1.91.4-1.2
One hour access (0.3 mA shock)0.30.30.90.0-0.90.2
Compulsive drug intake1.31.52.91.7-0.90.9
One hour access (shock baseline)0.30.41.2-1.10.1-0.4
Social response proportion1.01.22.41.0-1.50.3
Social responses4.55.88.92.1-2.03.0
Social time3.75.07.71.6-2.22.8
Soleus weight0.30.81.30.8-0.8-1.1
Bone: stiffness0.00.00.0-0.2-0.10.0
Tibialis anterior weight1.03.24.92.2-2.1-0.5
Time to tail flick, vehicle, before self-admin0.00.00.0-0.20.10.1
Time to tail flick, vehicle, after self-admin0.71.02.00.31.01.4
Time to tail flick, test, before self-admin1.71.72.3-1.51.4-1.0
Time to tail flick, test, after self-admin0.91.01.9-1.01.4-0.2
Delta time to tail flick, vehicle, before/after SA0.40.40.70.70.10.9
Delta time to tail flick, test, before/after SA0.80.81.01.0-0.90.7
Tibia length0.51.22.9-0.9-0.2-1.7
Ambulatory time before self-admin0.91.42.9-1.70.9-0.7
Ambulatory time after self-admin2.52.94.3-2.11.5-1.5
Bone: tissue strength1.71.72.31.4-1.51.0
Total heroin consumption0.00.00.1-0.3-0.00.2
Bone: trabecular number0.00.00.0-0.10.2-0.2
Bone: trabecular spacing0.00.00.10.2-0.20.0
Bone: trabecular thickness0.70.91.20.9-1.10.7
Bone: trabecular tissue density0.50.71.1-1.10.80.6
Water consumed over 24 hours0.30.50.8-0.10.90.7
Number of responses in last shaping day4.65.06.9-2.62.5-1.4