Anxa11

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 IL gene expression Anxa11 0.17 0.12 6.8e-03 0.11 0.07 0.1 0.09 1.4e-03 9.8e-03 2.5e-03 3.2e-03
2 Liver gene expression Anxa11 0.05 0.03 9.1e-06 0.04 0.04 0.04 0.04 1.9e-05 2.0e-05 8.3e-06 1.6e-05
3 NAcc gene expression Anxa11 0.06 0.04 6.5e-06 0.05 0.04 0.04 0.05 4.8e-06 1.4e-05 8.5e-06 3.0e-06
4 Brain gene expression Anxa11 0.06 0.05 6.6e-04 0.01 0.03 0.01 0.03 4.2e-02 6.2e-04 1.4e-02 7.9e-04

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3 4
Bone: apparent density1.01.72.9-1.1-1.6-1.7-0.0
Area under the delay curve0.00.00.10.30.20.0-0.3
BMI with tail1.65.28.8-3.0-1.7-1.02.9
BMI without tail1.73.66.1-2.5-2.0-1.41.5
Body weight1.66.711.3-3.4-2.2-1.43.0
Weight adjusted by age0.50.60.90.80.90.8-0.5
Bone surface0.61.01.4-1.1-1.2-1.00.5
Bone volume0.81.32.2-1.5-1.0-0.81.2
Breakpoint value in progressive ratio session0.30.40.70.60.80.6-0.1
Number of licking bursts0.10.10.1-0.2-0.3-0.40.0
Context. condit. distance diff. score0.10.10.1-0.3-0.2-0.10.3
Locomotion velocity, session 15.25.68.22.52.92.7-0.8
Locomotion distance, session 16.17.912.22.73.53.4-0.2
Locomotion velocity, session 23.23.75.72.02.42.2-0.5
Locomotion distance, session 23.04.26.71.92.62.50.0
Locomotion velocity, session 33.84.46.82.02.62.6-0.2
Locomotion distance, session 32.42.64.90.41.82.21.5
Stereotopy head waving bouts, day 30.30.40.5-0.7-0.7-0.70.3
Stereotopy head waving duration, day 31.01.22.2-0.8-1.4-1.5-0.3
Locomotion velocity, session 75.25.79.32.13.03.00.2
Locomotion distance, session 72.83.56.01.42.32.50.8
Stereotopy head waving bouts, day 72.32.64.1-1.4-2.0-2.0-0.3
Stereotopy head waving duration, day 71.92.34.0-1.1-1.9-2.0-0.6
Locomotion velocity, session 86.47.610.93.33.12.6-1.6
Locomotion distance, session 82.33.35.51.62.32.30.2
Degree of sensitization distance0.00.00.10.30.10.0-0.1
Degree of sensitization stereotypy1.61.72.9-0.8-1.6-1.7-1.0
Conditioned locomotion3.03.55.0-2.2-2.0-1.71.5
Cocaine response after cond. corrected0.30.30.60.0-0.5-0.8-0.6
Cocaine response after cond. not corrected0.20.20.60.4-0.1-0.5-0.8
Cocaine response before conditioning0.80.91.80.81.11.30.1
Saline control response1.51.95.5-1.4-0.10.42.3
Bone: connectivity density1.52.44.6-0.4-1.7-2.2-1.4
Bone: cortical apparent density0.10.10.20.50.30.2-0.3
Bone: cortical area6.710.217.1-4.1-2.8-2.03.4
Bone: cortical porosity1.01.12.00.61.31.40.5
Bone: cortical porosity1.31.42.50.61.41.60.8
Bone: cortical thickness3.35.58.4-2.9-2.3-2.02.0
Bone: cortical thickness4.14.76.3-2.5-2.5-2.31.1
Bone: cortical tissue density0.30.40.60.80.60.4-0.5
Condit. Reinf. active minus inactive responses0.20.30.6-0.50.10.30.8
Condit. Reinf. active-inactive response ratio1.92.13.1-1.8-1.6-1.40.8
Condit. Reinf. active responses0.40.50.90.40.90.90.4
Condit. Reinf. inactive responses3.13.75.72.02.42.1-0.4
Incentive salience index mean0.10.10.3-0.5-0.2-0.00.5
Condit. Reinf. lever presses0.00.10.1-0.3-0.3-0.30.0
Condit. Reinf. active minus inactive responses0.20.20.4-0.4-0.6-0.60.0
Condit. Reinf. active-inactive response ratio1.61.72.8-1.2-1.6-1.70.2
Condit. Reinf. active responses0.10.10.2-0.4-0.2-0.20.4
Condit. Reinf. inactive responses1.62.03.21.31.81.8-0.1
Condit. Reinf. lever presses0.60.82.0-0.60.30.71.4
Condit. Reinf. lever reinforcers received0.20.20.4-0.7-0.4-0.30.5
Conditioned reinforcement - actives0.50.51.0-0.8-0.4-0.21.0
Conditioned reinforcement - inactives2.32.64.8-2.2-1.1-0.52.0
Conditioned locomotion0.50.61.6-0.60.20.61.3
Patch foraging indifference point 0 sec1.42.34.20.61.72.01.3
Patch foraging indifference point AUC0.70.81.7-0.5-1.0-1.3-0.4
Delay disc. indifference point, 0s delay1.11.21.9-1.4-0.9-0.71.3
Delay disc. indifference point, 16s delay0.50.50.80.80.90.7-0.2
Delay disc. indifference point, 2s delay0.10.10.10.30.1-0.0-0.4
Delay disc. indifference point, 24s delay2.02.03.41.61.10.8-1.9
Delay disc. indifference point, 4s delay0.10.20.4-0.3-0.4-0.60.1
Delay disc. indifference point, 8s delay0.10.10.20.1-0.1-0.1-0.4
Indifference point function ln k0.60.81.5-0.10.81.21.1
Indifference point function log k0.60.81.5-0.10.81.21.1
Patch foraging total patch changes 0 sec1.32.13.70.51.61.91.4
Patch foraging total patch changes 12 sec0.81.11.70.41.11.31.0
Patch foraging total patch changes 18 sec0.81.01.90.81.41.10.4
Patch foraging total patch changes 24 sec0.10.10.30.0-0.1-0.6-0.2
Patch foraging total patch changes 6 sec0.20.30.6-0.7-0.3-0.20.8
Patch foraging time to switch 0 sec0.81.22.11.40.80.3-1.5
Patch foraging water rate 0 sec1.72.74.6-2.1-1.5-1.11.7
Patch foraging water rate 12 sec0.60.82.0-1.1-0.4-0.11.4
Patch foraging water rate 18 sec0.40.51.1-1.0-0.8-0.20.5
Patch foraging water rate 24 sec3.24.47.4-2.7-2.1-1.42.0
Patch foraging water rate 6 sec0.40.71.2-1.1-0.8-0.40.8
Seeking ratio, delayed vs. immediate footshock1.51.72.8-1.5-0.9-1.11.7
Distance traveled before self-admin0.20.20.60.10.50.80.3
Distance traveled after self-admin0.60.72.0-0.80.10.41.4
Extensor digitorum longus weight0.62.34.0-0.41.41.82.0
Bone: elastic displacement0.81.01.21.11.11.1-0.6
Bone: elastic work0.40.50.8-0.9-0.7-0.60.7
Bone: endosteal estimation4.29.115.8-4.0-2.6-1.73.3
Bone: endosteal perimeter2.85.810.0-3.2-2.1-1.42.6
Epididymis fat weight0.81.93.2-0.6-1.7-1.8-1.0
Delta time in closed arm before/after self-admin0.80.81.1-1.0-1.0-0.90.5
Delta time in open arm before/after self-admin1.31.22.8-0.41.01.01.7
Diff in mean of infusions in LGA sessions2.62.94.32.11.71.3-1.7
Delay discount exponential model param0.10.10.4-0.4-0.20.00.6
Extinction: sum of active levers before priming2.01.93.41.31.81.70.0
Active lever presses in extinction session 60.60.61.00.81.00.9-0.1
Bone: final force7.011.317.7-4.2-3.3-2.73.0
Bone: final moment6.210.116.1-4.0-3.0-2.43.0
Food consumed during 24 hour testing period2.53.05.40.52.02.31.5
Glucose0.10.20.30.30.50.50.1
Heart weight0.00.00.00.10.20.10.1
Delay discount hyperbolic model param0.10.10.3-0.4-0.10.10.5
Intermittent access intake day 1-15 change0.10.10.10.3-0.1-0.2-0.2
Intermittent access intake escalation0.30.30.60.5-0.4-0.7-0.7
Intermittent access intake escalation 20.30.30.4-0.5-0.7-0.60.5
Intermitt. access day 1 inactive lever presses0.10.20.3-0.6-0.10.10.5
Intermitt. access day 15 inactive lever presses0.10.10.3-0.1-0.5-0.3-0.0
Intermitt. access escalation Index2.42.13.6-1.4-1.9-1.7-0.1
Intermittent access day 1 total infusions2.02.35.1-0.81.01.62.3
Intermittent access day 15 total infusions1.01.12.20.31.21.50.9
Intermittent access terminal intake (last 3 days)1.51.63.0-0.21.01.51.7
Intermittent access total infusions1.01.11.8-0.30.81.31.3
Intermittent access day 1 locomotion2.12.23.80.11.71.91.5
Intermittent access day 15 total locomotion0.80.92.0-0.50.61.01.4
Intermittent access total locomotion1.31.52.9-0.41.11.41.7
Intermittent access standard deviation1.21.31.7-1.3-1.3-1.01.0
Left kidney weight0.30.91.5-0.9-1.2-1.0-0.1
Right kidney weight0.41.23.0-1.3-0.40.21.7
Cocaine induced anxiety0.10.20.4-0.2-0.5-0.6-0.0
Post-drug Anxiety0.40.40.60.10.70.70.7
Baseline Anxiety0.80.81.7-0.10.91.30.8
Tail length0.10.20.3-0.5-0.5-0.30.2
Length with tail0.00.20.5-0.30.00.30.7
Length without tail0.41.02.8-0.70.20.71.7
Times rat made contact with spout3.94.58.20.42.22.92.2
Lifetime Intake1.41.62.6-0.31.11.61.6
Liver weight, left0.81.22.9-1.3-0.5-0.11.7
Liver weight, right0.50.82.3-0.8-0.00.51.5
Locomotor activity0.71.12.3-1.3-0.40.31.5
Locomotor testing distance1.83.04.8-2.2-1.8-1.41.3
Locomotor testing rearing1.11.72.8-1.7-1.1-0.61.6
Locomotion in novel chamber0.40.51.1-0.10.70.81.0
Locomotion in novel chamber post-restriction0.50.60.8-0.8-0.6-0.90.7
Fecal boli incidents, locomotor time 10.00.10.1-0.2-0.10.30.3
Change in fecal boli incidents, locomotor task0.30.30.9-0.10.30.51.0
Time >=10cm from walls, locomotor time 10.90.91.51.20.90.8-0.9
Bouts of movement, locomotor time 10.10.10.3-0.3-0.3-0.60.2
Total resting periods, locomotor time 10.20.20.50.1-0.3-0.7-0.4
Rest time, locomotor task time 10.80.92.1-0.7-1.0-1.4-0.1
Distance moved, locomotor task time 10.50.61.1-1.0-0.6-0.01.0
Vertical activity count, locomotor time 10.50.61.3-0.9-0.30.11.2
Time >=10cm from walls, locomotor time 21.81.92.5-1.6-1.5-1.40.8
Bouts of movement, locomotor time 20.30.40.60.70.60.2-0.8
Total resting periods, locomotor time 20.30.30.70.60.4-0.0-0.8
Rest time, locomotor task time 21.31.53.6-0.5-1.4-1.9-0.6
Distance moved, locomotor task time 21.11.32.5-1.6-1.1-0.71.0
Vertical activity count, locomotor time 22.72.95.2-2.3-1.5-0.81.9
Light reinforcement 10.10.20.30.50.60.5-0.2
Light reinforcement 20.91.21.71.31.11.0-0.9
Bone: marrow area4.08.614.9-3.9-2.6-1.73.2
Bone: maximum diameter2.64.88.7-2.9-1.6-0.82.7
Bone: maximum force9.516.425.0-5.0-4.2-3.53.3
Bone: maximum moment8.314.422.4-4.7-3.8-3.23.3
Mean time between licks in bursts1.52.23.31.81.41.1-1.5
Mean num. licks in bursts1.31.63.00.31.41.71.1
Cd content in liver0.00.00.00.0-0.1-0.10.1
Co content in liver0.91.11.90.61.31.40.6
Cu content in liver2.53.16.20.92.12.50.9
Fe content in liver0.10.10.30.50.30.3-0.3
K content in liver0.10.10.10.30.40.40.0
Mg content in liver0.00.00.1-0.00.20.20.2
Mn content in liver1.31.53.81.40.3-0.3-1.9
Na content in liver0.10.10.20.40.30.3-0.5
Rb content in liver0.81.02.4-1.2-0.4-0.11.5
Se content in liver0.60.81.80.4-0.7-0.8-1.3
Sr content in liver0.10.10.2-0.5-0.4-0.30.1
Zn content in liver4.14.58.90.82.53.01.4
Bone: minimum diameter5.710.618.2-4.3-2.5-1.63.9
Time in familiar zone, hab. session 13.02.84.1-2.0-1.8-1.61.2
Time in novel zone, hab. session 11.11.11.61.01.21.3-0.3
Total zone transitions, hab. session 12.83.97.11.42.42.70.7
Total locomotion distance, hab. session 11.31.92.91.41.71.6-0.2
Locomotion velocity, hab. session 11.82.53.81.72.01.8-0.3
Time in familiar zone, hab. session 21.31.32.20.11.11.51.3
Time in novel zone, hab. session 20.30.30.50.1-0.4-0.7-0.7
Total zone transitions, hab. session 22.12.74.61.42.02.10.2
Total locomotion distance, hab. session 21.51.93.21.21.81.80.1
Locomotion velocity, hab. session 21.31.72.71.21.61.6-0.0
Novel to familiar place preference ratio0.00.00.10.20.30.2-0.0
Novelty place preference0.30.30.50.50.70.70.1
Time in novel zone, NPP test0.30.30.50.50.70.6-0.0
Total zone transitions, NPP test1.92.74.51.42.12.10.1
Total locomotion distance, NPP test1.41.93.11.21.71.80.2
Locomotion velocity, NPP test1.31.92.91.31.71.70.0
Intraocular pressure0.50.71.10.81.01.1-0.1
Delta distance traveled before/after self-admin0.00.00.10.0-0.2-0.3-0.1
Delta ambulatory time before/after self-admin0.20.20.6-0.20.20.40.8
Parametrial fat weight1.22.34.0-1.5-2.0-1.70.2
Pavlov. Cond. lever latency0.20.30.5-0.3-0.6-0.7-0.4
Pavlov. Cond. magazine entry latency0.10.10.2-0.4-0.4-0.20.1
Pavlov. Cond. change in total contacts0.00.00.00.10.10.1-0.1
Pavlov. Cond. index score0.00.00.00.0-0.1-0.0-0.1
Pavlov. Cond. latency score0.10.10.2-0.4-0.3-0.10.4
Pavlov. Cond. lever contacts0.50.50.80.90.80.7-0.5
Pavlov. Cond. magazine entry number0.00.00.1-0.1-0.2-0.30.1
Pavlov. Cond. intertrial magazine entries1.11.32.01.41.41.1-0.5
Pavlov. Cond. lever-magazine prob. diff.0.20.20.30.50.30.3-0.5
Pavlov. Cond. response bias0.80.91.41.21.00.8-0.8
Pavlov. Cond. lever latency1.72.34.3-0.8-1.8-2.1-1.0
Pavlov. Cond. magazine entry latency1.51.72.51.41.61.5-0.4
Pavlov. Cond. change in total contacts1.11.52.60.31.41.61.2
Pavlov. Cond. index score1.62.13.61.11.81.90.3
Pavlov. Cond. latency score1.82.34.11.11.92.00.5
Pavlov. Cond. lever contacts1.11.42.60.51.41.61.0
Pavlov. Cond. magazine entry number1.01.22.2-0.9-1.4-1.5-0.1
Pavlov. Cond. intertrial magazine entries1.92.53.6-1.6-1.9-1.80.5
Pavlov. Cond. lever-magazine prob. diff.1.62.03.41.21.81.90.1
Pavlov. Cond. response bias1.31.73.10.91.61.80.5
Time in closed arm before self-admin1.71.93.20.1-1.2-1.7-1.8
Time in closed arm after self-admin4.34.47.7-0.8-2.5-2.8-1.8
Time in open arm before self-admin0.20.20.40.60.30.3-0.3
Time in open arm after self-admin2.42.75.2-0.21.61.72.3
Bone: periosteal estimation7.715.927.0-5.2-3.6-2.54.2
Bone: periosteal perimeter3.86.411.0-3.3-2.1-1.42.9
Bone: post-yield work3.54.76.3-2.5-2.5-2.31.1
Progressive ratio test 1 active lever presses1.71.84.7-1.00.61.02.2
Progressive ratio test 1 breakpoint2.22.35.7-1.00.91.32.4
Progressive ratio test 1 inactive lever presses1.01.12.9-0.60.60.81.7
Progressive ratio test 2 active lever presses2.62.85.30.01.72.31.7
Progressive ratio test 2 breakpoint2.02.34.0-0.11.42.01.8
Progressive ratio test 2 inactive lever presses0.50.51.1-0.9-0.5-0.21.1
Incentive Sensitization - Responses2.92.97.00.61.72.71.2
Incentive Sensitization - Breakpoint2.82.87.00.61.72.61.1
Sum of active levers in priming session hrs 5-60.00.00.20.2-0.0-0.1-0.4
Progressive ratio0.00.00.00.1-0.1-0.1-0.1
Food seeking constrained by brief footshock1.92.33.9-1.5-2.0-1.70.4
Seeking ratio, punishment vs. effort0.20.20.3-0.4-0.6-0.6-0.2
Retroperitoneal fat weight1.23.86.4-2.0-2.5-2.10.7
Reaction time number correct0.20.20.40.20.60.60.4
Reaction time mean minus median1.92.64.1-1.4-2.0-2.00.0
Reaction time mean minus median AUC2.63.44.9-2.0-2.2-2.10.7
Reaction time num false alarms1.11.52.51.01.61.60.1
Reaction time num false alarms AUC0.70.91.31.01.21.1-0.4
Reaction time trials correct on left0.20.20.40.20.60.60.4
Reaction time trials on left0.10.10.30.10.40.50.3
Reaction time mean1.31.83.1-1.3-1.7-1.50.2
Reaction time mean AUC0.91.22.2-0.9-1.5-1.4-0.2
Median of all reaction times0.60.81.4-0.9-1.2-0.90.1
Reaction time omissions0.91.22.0-0.7-1.4-1.4-0.6
Reaction time false alarm rate0.10.20.30.60.40.3-0.5
Reaction time premature initiation rate2.63.56.6-1.5-2.3-2.6-0.4
Reaction time premature initiations1.92.74.8-1.5-2.0-2.2-0.0
Std. dev. reaction times2.73.86.1-1.9-2.5-2.30.2
Reaction time trials completed0.10.10.30.10.40.50.3
Reaction time trials AUC0.10.20.5-0.30.20.30.7
Run reversals in cocaine runway, females0.50.51.30.70.20.3-1.1
Run reversals in cocaine runway, males3.02.94.61.71.92.2-0.7
Latency to leave start box in cocaine runway0.20.30.70.5-0.0-0.2-0.9
Latency to leave start box in cocaine runway, F0.00.00.10.30.20.1-0.1
Latency to leave start box in cocaine runway, M0.40.40.7-0.1-0.6-0.7-0.8
Std. dev. time between licks in bursts1.11.33.80.9-0.3-0.8-1.9
Total sessions with >9 infusions2.02.24.4-0.51.21.72.1
Short access day 1 total inactive lever presses0.70.81.2-1.0-0.8-0.51.1
Short access day 10 total inactive lever presses1.01.11.51.21.00.9-1.1
Short access day 1 total infusions1.41.54.2-1.00.30.92.0
Short access day 10 total infusions0.50.51.10.20.91.00.4
Short access total infusions1.82.13.4-0.31.31.81.8
Short access day 1 locomotion1.51.64.3-0.80.61.02.1
Short access day 10 total locomotion0.20.20.50.10.60.70.1
Short access total locomotion0.70.71.50.41.11.20.2
One hour access (0.3 mA shock)1.31.52.70.91.51.60.4
Compulsive drug intake1.21.33.61.20.2-0.2-1.9
One hour access (shock baseline)0.50.61.5-0.20.60.81.2
Social response proportion0.20.20.30.40.40.5-0.4
Social responses1.01.21.61.31.00.9-1.2
Social time0.30.41.10.2-0.3-0.4-1.1
Soleus weight2.98.412.7-3.6-3.0-2.62.2
Bone: stiffness8.513.419.8-4.5-3.9-3.32.8
Tibialis anterior weight1.24.210.3-2.5-0.60.23.2
Time to tail flick, vehicle, before self-admin0.40.40.60.70.70.5-0.5
Time to tail flick, vehicle, after self-admin2.22.35.21.80.80.5-2.3
Time to tail flick, test, before self-admin0.20.20.60.2-0.1-0.2-0.8
Time to tail flick, test, after self-admin0.40.40.70.6-0.2-0.6-0.9
Delta time to tail flick, vehicle, before/after SA0.80.81.21.10.70.6-1.0
Delta time to tail flick, test, before/after SA0.10.10.2-0.1-0.2-0.20.5
Tibia length0.71.94.61.70.3-0.1-2.2
Ambulatory time before self-admin0.00.00.0-0.2-0.10.10.0
Ambulatory time after self-admin0.91.02.0-0.30.71.11.4
Bone: tissue strength1.11.01.9-0.8-1.2-1.4-0.0
Total heroin consumption0.00.00.1-0.10.2-0.00.3
Bone: trabecular number2.64.07.3-1.7-2.5-2.7-0.1
Bone: trabecular spacing1.11.42.90.61.41.70.7
Bone: trabecular thickness0.20.20.4-0.2-0.5-0.6-0.2
Bone: trabecular tissue density1.31.82.8-1.7-1.5-1.20.9
Water consumed over 24 hours0.30.40.6-0.00.60.80.8
Number of responses in last shaping day1.11.22.11.01.41.2-0.2