Ankrd52

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 IL mRNA stability Ankrd52 0.17 0.12 9.8e-03 0.04 0.03 0.06 0.04 3.1e-02 6.9e-02 2.0e-02 4.2e-02
2 Adipose gene expression Ankrd52 0.09 0.06 3.7e-08 0.06 0.06 0.06 0.06 2.0e-07 1.8e-07 1.1e-07 3.4e-07
3 Adipose mRNA stability Ankrd52 0.08 0.06 1.5e-05 0.03 0.02 0.03 0.02 2.4e-04 1.6e-03 3.4e-04 1.0e-03

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
Bone: apparent density2.34.27.01.0-2.22.6
Area under the delay curve0.00.00.00.2-0.20.2
BMI with tail3.411.828.35.32.5-1.0
BMI without tail0.52.75.92.41.3-0.8
Body weight0.62.63.92.01.6-1.1
Weight adjusted by age0.00.10.1-0.30.2-0.3
Bone surface4.69.114.30.9-3.53.8
Bone volume4.79.414.91.2-3.43.9
Breakpoint value in progressive ratio session0.30.51.2-1.1-0.40.1
Number of licking bursts1.02.93.31.61.8-1.7
Context. condit. distance diff. score0.20.20.30.50.4-0.6
Locomotion velocity, session 11.41.62.80.6-1.31.7
Locomotion distance, session 12.12.74.90.1-1.82.2
Locomotion velocity, session 23.33.96.4-0.6-2.22.5
Locomotion distance, session 23.95.58.0-1.5-2.52.8
Locomotion velocity, session 31.92.25.9-2.4-0.90.1
Locomotion distance, session 30.10.10.2-0.50.10.0
Stereotopy head waving bouts, day 32.73.25.8-2.4-1.61.2
Stereotopy head waving duration, day 31.51.93.3-1.8-1.20.9
Locomotion velocity, session 70.20.20.3-0.0-0.60.5
Locomotion distance, session 70.60.71.30.01.0-1.1
Stereotopy head waving bouts, day 71.31.52.5-0.7-1.61.3
Stereotopy head waving duration, day 71.72.03.3-0.5-1.81.6
Locomotion velocity, session 82.83.44.8-0.8-2.22.2
Locomotion distance, session 80.40.60.7-0.6-0.80.8
Degree of sensitization distance0.30.40.80.90.3-0.5
Degree of sensitization stereotypy0.50.60.90.4-0.80.9
Conditioned locomotion1.72.03.30.41.8-1.6
Cocaine response after cond. corrected1.92.94.11.22.0-1.7
Cocaine response after cond. not corrected2.13.04.41.22.1-1.8
Cocaine response before conditioning0.40.50.6-0.8-0.80.6
Saline control response0.30.51.00.41.0-0.5
Bone: connectivity density1.52.44.40.6-1.62.1
Bone: cortical apparent density0.50.82.21.50.40.0
Bone: cortical area1.32.12.51.6-1.21.5
Bone: cortical porosity0.40.40.60.2-0.70.8
Bone: cortical porosity0.91.01.40.7-1.01.2
Bone: cortical thickness0.91.53.81.9-0.30.8
Bone: cortical thickness0.50.60.90.60.9-0.7
Bone: cortical tissue density0.40.61.61.30.30.1
Condit. Reinf. active minus inactive responses0.80.91.9-1.4-0.80.5
Condit. Reinf. active-inactive response ratio0.10.20.3-0.50.3-0.3
Condit. Reinf. active responses1.72.22.7-1.6-1.61.2
Condit. Reinf. inactive responses1.52.03.3-1.1-1.81.2
Incentive salience index mean1.11.41.8-1.0-1.31.2
Condit. Reinf. lever presses1.62.43.6-0.2-1.91.9
Condit. Reinf. active minus inactive responses1.01.63.9-2.00.3-0.9
Condit. Reinf. active-inactive response ratio1.32.02.8-1.41.2-1.7
Condit. Reinf. active responses0.60.92.4-1.5-0.4-0.1
Condit. Reinf. inactive responses0.30.50.8-0.4-0.90.6
Condit. Reinf. lever presses1.01.54.3-2.1-0.0-0.5
Condit. Reinf. lever reinforcers received0.50.72.0-1.4-0.0-0.5
Conditioned reinforcement - actives0.10.20.70.80.2-0.1
Conditioned reinforcement - inactives0.30.81.00.91.0-0.8
Conditioned locomotion0.60.81.3-0.8-1.10.8
Patch foraging indifference point 0 sec1.02.98.42.90.40.4
Patch foraging indifference point AUC0.20.51.4-1.2-0.1-0.4
Delay disc. indifference point, 0s delay1.92.22.91.7-1.11.5
Delay disc. indifference point, 16s delay0.10.20.2-0.5-0.40.3
Delay disc. indifference point, 2s delay0.50.50.70.7-0.70.8
Delay disc. indifference point, 24s delay0.00.00.10.40.1-0.0
Delay disc. indifference point, 4s delay0.80.81.3-0.2-1.21.1
Delay disc. indifference point, 8s delay0.30.40.60.30.8-0.8
Indifference point function ln k0.00.10.30.60.20.2
Indifference point function log k0.00.10.30.60.20.2
Patch foraging total patch changes 0 sec0.92.67.52.70.40.3
Patch foraging total patch changes 12 sec1.01.31.81.31.2-0.8
Patch foraging total patch changes 18 sec0.00.10.10.2-0.20.3
Patch foraging total patch changes 24 sec0.10.30.80.9-0.30.3
Patch foraging total patch changes 6 sec0.71.23.61.90.4-0.1
Patch foraging time to switch 0 sec0.20.60.80.8-0.60.9
Patch foraging water rate 0 sec0.31.21.70.51.3-1.3
Patch foraging water rate 12 sec0.31.22.00.81.4-1.0
Patch foraging water rate 18 sec1.63.65.6-0.72.2-2.4
Patch foraging water rate 24 sec4.26.08.90.53.0-3.0
Patch foraging water rate 6 sec1.21.72.5-1.11.2-1.6
Seeking ratio, delayed vs. immediate footshock0.71.01.5-0.7-1.21.0
Distance traveled before self-admin0.40.81.7-1.3-0.70.4
Distance traveled after self-admin0.00.00.1-0.3-0.0-0.0
Extensor digitorum longus weight2.610.217.04.13.3-1.7
Bone: elastic displacement0.00.10.10.2-0.20.3
Bone: elastic work0.60.71.71.3-0.30.6
Bone: endosteal estimation0.30.82.41.5-0.40.2
Bone: endosteal perimeter0.51.32.1-0.1-1.41.3
Epididymis fat weight0.20.91.2-0.61.0-1.1
Delta time in closed arm before/after self-admin3.83.65.50.72.3-2.2
Delta time in open arm before/after self-admin0.20.20.50.70.4-0.2
Diff in mean of infusions in LGA sessions0.50.92.4-1.6-0.40.0
Delay discount exponential model param0.00.00.0-0.10.2-0.2
Extinction: sum of active levers before priming0.71.12.3-1.50.4-0.8
Active lever presses in extinction session 60.20.20.3-0.3-0.50.5
Bone: final force1.62.66.62.6-0.70.9
Bone: final moment1.62.66.62.6-0.70.9
Food consumed during 24 hour testing period0.10.20.40.70.2-0.1
Glucose0.50.71.51.20.7-0.5
Heart weight0.20.40.5-0.70.6-0.6
Delay discount hyperbolic model param0.10.20.2-0.40.3-0.4
Intermittent access intake day 1-15 change0.10.40.6-0.70.5-0.7
Intermittent access intake escalation0.10.40.6-0.80.5-0.7
Intermittent access intake escalation 20.20.41.1-1.00.0-0.3
Intermitt. access day 1 inactive lever presses0.22.12.4-1.51.3-1.5
Intermitt. access day 15 inactive lever presses0.10.51.5-1.2-0.1-0.2
Intermitt. access escalation Index0.20.50.80.2-0.80.9
Intermittent access day 1 total infusions0.10.20.30.50.6-0.4
Intermittent access day 15 total infusions0.00.00.10.30.00.0
Intermittent access terminal intake (last 3 days)0.20.30.40.4-0.60.6
Intermittent access total infusions0.20.20.70.80.00.1
Intermittent access day 1 locomotion0.40.71.0-0.11.0-1.0
Intermittent access day 15 total locomotion0.00.20.3-0.20.4-0.5
Intermittent access total locomotion0.10.10.10.00.3-0.4
Intermittent access standard deviation0.10.50.6-0.7-0.80.6
Left kidney weight0.00.20.3-0.20.4-0.6
Right kidney weight0.10.71.2-1.10.5-0.9
Cocaine induced anxiety0.92.33.4-1.0-1.91.6
Post-drug Anxiety2.83.25.0-0.3-2.22.2
Baseline Anxiety0.00.00.00.1-0.00.1
Tail length1.16.117.2-4.1-1.0-0.3
Length with tail0.73.28.9-3.0-0.1-0.8
Length without tail0.10.71.10.71.0-0.8
Times rat made contact with spout0.70.91.20.81.1-0.8
Lifetime Intake0.60.82.21.50.00.3
Liver weight, left0.30.40.90.90.6-0.3
Liver weight, right0.30.50.7-0.80.4-0.8
Locomotor activity2.13.33.8-1.9-2.01.5
Locomotor testing distance0.71.62.2-1.2-1.51.1
Locomotor testing rearing0.00.10.2-0.30.3-0.4
Locomotion in novel chamber0.00.00.00.10.1-0.1
Locomotion in novel chamber post-restriction1.02.97.4-2.7-1.10.5
Fecal boli incidents, locomotor time 10.30.91.40.31.2-1.0
Change in fecal boli incidents, locomotor task1.51.62.4-0.5-1.61.4
Time >=10cm from walls, locomotor time 10.81.01.20.9-0.91.1
Bouts of movement, locomotor time 10.20.30.9-1.0-0.1-0.1
Total resting periods, locomotor time 10.50.61.7-1.3-0.40.1
Rest time, locomotor task time 10.40.60.8-0.9-0.90.6
Distance moved, locomotor task time 10.51.42.31.5-0.91.1
Vertical activity count, locomotor time 10.21.23.01.70.7-0.2
Time >=10cm from walls, locomotor time 20.30.81.00.81.0-0.9
Bouts of movement, locomotor time 20.30.91.4-0.2-1.11.2
Total resting periods, locomotor time 20.31.21.9-0.2-1.31.4
Rest time, locomotor task time 20.40.71.0-0.3-1.01.0
Distance moved, locomotor task time 20.40.60.90.20.8-1.0
Vertical activity count, locomotor time 20.81.92.71.01.6-1.4
Light reinforcement 10.73.35.1-2.3-1.81.3
Light reinforcement 20.40.81.3-1.2-0.80.7
Bone: marrow area0.30.72.11.4-0.40.2
Bone: maximum diameter1.12.13.2-0.2-1.81.8
Bone: maximum force1.32.56.72.6-0.40.8
Bone: maximum moment1.32.56.82.6-0.40.8
Mean time between licks in bursts0.00.30.9-0.90.1-0.1
Mean num. licks in bursts0.30.70.9-0.8-0.80.9
Cd content in liver0.00.10.1-0.3-0.20.2
Co content in liver1.01.23.6-1.9-0.1-0.1
Cu content in liver0.91.11.31.0-1.01.2
Fe content in liver0.30.40.40.50.6-0.6
K content in liver1.01.01.3-0.5-1.21.1
Mg content in liver0.80.81.0-1.0-1.00.7
Mn content in liver4.24.77.5-0.5-2.72.5
Na content in liver0.50.50.80.4-0.80.9
Rb content in liver1.01.11.50.7-1.11.2
Se content in liver0.00.00.0-0.0-0.00.2
Sr content in liver0.40.40.7-0.30.6-0.8
Zn content in liver2.63.05.7-2.41.0-1.5
Bone: minimum diameter0.71.31.91.1-1.01.4
Time in familiar zone, hab. session 11.92.16.2-2.5-0.4-0.3
Time in novel zone, hab. session 11.92.25.32.3-0.51.0
Total zone transitions, hab. session 11.72.44.1-0.3-1.72.0
Total locomotion distance, hab. session 13.85.47.8-0.9-2.72.8
Locomotion velocity, hab. session 13.04.26.1-1.1-2.32.5
Time in familiar zone, hab. session 22.32.67.2-2.70.1-0.8
Time in novel zone, hab. session 22.83.18.02.8-0.31.0
Total zone transitions, hab. session 22.73.56.31.3-1.52.5
Total locomotion distance, hab. session 21.51.93.5-0.3-1.51.9
Locomotion velocity, hab. session 22.12.85.1-0.3-1.82.3
Novel to familiar place preference ratio1.62.14.62.1-0.71.1
Novelty place preference1.31.73.31.8-0.81.1
Time in novel zone, NPP test1.51.84.12.0-0.61.0
Total zone transitions, NPP test0.81.22.10.9-0.81.4
Total locomotion distance, NPP test1.21.63.10.5-1.21.8
Locomotion velocity, NPP test1.11.52.80.1-1.31.7
Intraocular pressure1.01.62.2-1.11.1-1.5
Delta distance traveled before/after self-admin0.30.30.40.60.6-0.4
Delta ambulatory time before/after self-admin0.10.20.70.80.10.1
Parametrial fat weight0.10.30.80.90.10.1
Pavlov. Cond. lever latency1.41.72.9-0.31.5-1.7
Pavlov. Cond. magazine entry latency0.50.71.7-1.3-0.50.2
Pavlov. Cond. change in total contacts0.10.10.30.60.0-0.1
Pavlov. Cond. index score0.60.71.0-0.5-1.01.0
Pavlov. Cond. latency score1.01.31.8-0.4-1.31.3
Pavlov. Cond. lever contacts1.21.42.40.5-1.31.5
Pavlov. Cond. magazine entry number0.20.30.80.90.20.1
Pavlov. Cond. intertrial magazine entries0.80.91.7-0.50.9-1.3
Pavlov. Cond. lever-magazine prob. diff.0.50.60.9-0.5-0.90.8
Pavlov. Cond. response bias0.20.20.6-0.7-0.30.0
Pavlov. Cond. lever latency0.70.92.31.50.7-0.2
Pavlov. Cond. magazine entry latency0.81.12.6-1.6-0.90.2
Pavlov. Cond. change in total contacts0.10.30.9-0.9-0.2-0.3
Pavlov. Cond. index score0.61.02.5-1.6-0.6-0.1
Pavlov. Cond. latency score0.71.22.7-1.6-0.80.2
Pavlov. Cond. lever contacts0.60.82.3-1.5-0.3-0.2
Pavlov. Cond. magazine entry number0.91.12.51.60.9-0.1
Pavlov. Cond. intertrial magazine entries0.40.81.10.91.1-0.7
Pavlov. Cond. lever-magazine prob. diff.0.71.12.7-1.6-0.80.1
Pavlov. Cond. response bias0.91.23.4-1.8-0.4-0.4
Time in closed arm before self-admin0.50.81.20.5-1.01.1
Time in closed arm after self-admin0.30.30.60.80.5-0.3
Time in open arm before self-admin0.00.00.00.00.2-0.1
Time in open arm after self-admin0.80.81.11.01.0-0.7
Bone: periosteal estimation1.02.33.92.0-1.11.3
Bone: periosteal perimeter1.01.92.90.7-1.61.7
Bone: post-yield work0.20.40.80.90.3-0.6
Progressive ratio test 1 active lever presses0.30.50.91.00.6-0.4
Progressive ratio test 1 breakpoint0.30.50.90.90.6-0.4
Progressive ratio test 1 inactive lever presses0.00.00.1-0.2-0.10.0
Progressive ratio test 2 active lever presses0.00.00.10.3-0.10.1
Progressive ratio test 2 breakpoint0.00.00.00.2-0.20.1
Progressive ratio test 2 inactive lever presses0.20.61.11.1-0.50.6
Incentive Sensitization - Responses0.00.10.2-0.5-0.2-0.0
Incentive Sensitization - Breakpoint0.10.20.4-0.6-0.40.2
Sum of active levers in priming session hrs 5-60.10.10.2-0.40.0-0.1
Progressive ratio0.31.01.21.01.1-0.9
Food seeking constrained by brief footshock0.91.13.2-1.8-0.50.0
Seeking ratio, punishment vs. effort0.71.53.5-1.9-0.90.5
Retroperitoneal fat weight1.35.67.22.32.7-2.1
Reaction time number correct0.51.62.20.71.5-1.5
Reaction time mean minus median0.10.92.1-1.4-0.70.4
Reaction time mean minus median AUC0.42.43.8-1.1-1.91.5
Reaction time num false alarms0.30.40.70.80.6-0.5
Reaction time num false alarms AUC0.30.60.80.70.9-0.7
Reaction time trials correct on left0.51.62.20.71.5-1.5
Reaction time trials on left0.41.52.00.71.4-1.4
Reaction time mean0.71.62.1-1.0-1.51.3
Reaction time mean AUC0.51.11.6-0.5-1.21.2
Median of all reaction times0.81.21.7-0.6-1.31.2
Reaction time omissions0.20.30.50.2-0.70.7
Reaction time false alarm rate0.10.10.20.4-0.10.3
Reaction time premature initiation rate0.81.22.9-1.70.4-0.8
Reaction time premature initiations0.72.02.7-1.31.3-1.6
Std. dev. reaction times0.30.91.2-0.9-1.10.9
Reaction time trials completed0.41.52.00.71.4-1.4
Reaction time trials AUC0.61.92.70.71.6-1.6
Run reversals in cocaine runway, females1.61.82.4-1.6-1.50.9
Run reversals in cocaine runway, males1.61.72.3-1.3-1.51.2
Latency to leave start box in cocaine runway1.01.42.00.9-1.21.4
Latency to leave start box in cocaine runway, F1.92.43.61.0-1.71.9
Latency to leave start box in cocaine runway, M0.20.20.30.10.5-0.5
Std. dev. time between licks in bursts0.71.21.8-0.5-1.41.3
Total sessions with >9 infusions0.50.61.71.3-0.10.3
Short access day 1 total inactive lever presses0.20.40.7-0.80.3-0.5
Short access day 10 total inactive lever presses0.31.92.5-1.11.4-1.6
Short access day 1 total infusions0.30.51.51.20.00.3
Short access day 10 total infusions0.10.10.20.50.3-0.2
Short access total infusions0.60.92.41.6-0.00.4
Short access day 1 locomotion0.10.10.2-0.50.2-0.4
Short access day 10 total locomotion0.52.03.5-1.90.9-1.3
Short access total locomotion0.10.20.2-0.50.4-0.5
One hour access (0.3 mA shock)0.30.30.50.70.5-0.4
Compulsive drug intake0.10.10.2-0.0-0.40.4
One hour access (shock baseline)0.00.10.10.10.3-0.3
Social response proportion0.70.91.5-1.2-0.90.5
Social responses5.06.612.4-3.5-2.31.4
Social time0.50.81.00.91.0-0.7
Soleus weight2.57.318.34.31.8-0.3
Bone: stiffness1.52.77.92.80.10.1
Tibialis anterior weight0.51.84.42.11.0-0.1
Time to tail flick, vehicle, before self-admin1.01.31.8-0.8-1.31.2
Time to tail flick, vehicle, after self-admin0.71.51.8-1.31.0-1.3
Time to tail flick, test, before self-admin1.21.32.1-0.3-1.41.3
Time to tail flick, test, after self-admin0.20.20.40.2-0.50.6
Delta time to tail flick, vehicle, before/after SA2.02.23.40.21.9-1.7
Delta time to tail flick, test, before/after SA0.81.01.5-0.41.2-1.2
Tibia length0.51.33.8-1.9-0.2-0.3
Ambulatory time before self-admin0.10.20.5-0.7-0.30.1
Ambulatory time after self-admin0.00.00.0-0.1-0.10.1
Bone: tissue strength2.42.57.22.70.40.2
Total heroin consumption1.31.52.6-1.6-1.20.8
Bone: trabecular number1.32.54.1-0.3-1.82.0
Bone: trabecular spacing2.94.26.7-0.22.4-2.6
Bone: trabecular thickness5.37.311.11.3-3.13.3
Bone: trabecular tissue density2.44.26.62.61.9-1.6
Water consumed over 24 hours0.40.81.21.1-0.60.9
Number of responses in last shaping day0.50.71.9-1.40.1-0.5