Ankrd52

Models

All models for this gene with cis-heritability P-value <0.01 were tested and are shown here. In each tissue, a gene can have zero, one, or multiple RNA phenotypes for each RNA modality. After the heritability statistics, subsequent columns show cross-validation performance (R2 and P-value) of each modeling method. The best-performing method for each models is used for TWAS.

# Tissue Modality RNA phenotype h2 h2 SE h2 P xQTL R2 BLUP R2 ENET R2 LASSO R2 xQTL P BLUP P ENET P LASSO P
1 IL mRNA stability Ankrd52 0.17 0.12 9.8e-03 0.04 0.03 0.06 0.04 3.1e-02 6.9e-02 2.0e-02 4.1e-02
2 Adipose gene expression Ankrd52 0.09 0.06 3.7e-08 0.06 0.06 0.06 0.06 2.0e-07 1.8e-07 1.2e-07 3.4e-07
3 Adipose mRNA stability Ankrd52 0.08 0.06 1.5e-05 0.03 0.02 0.03 0.02 2.4e-04 1.6e-03 3.4e-04 9.5e-04

Trait associations

The numbered columns correspond to the numbered models in the table above. They contain the TWAS Z-score for each trait-model pair. Colors indicate strength of Z-scores: cells with lower negative Z-scores are darker blue, cells with higher positive Z-scores are darker red. Significant associations have white and bolded text.

Trait Avg chi2 ratio Avg chi2 Max chi2 1 2 3
Bone: apparent density2.54.27.0-1.02.2-2.6
Area under the delay curve0.00.00.0-0.20.2-0.2
BMI with tail3.411.828.3-5.3-2.51.0
BMI without tail0.92.75.9-2.4-1.30.8
Body weight0.62.63.9-2.0-1.61.1
Weight adjusted by age0.00.10.10.3-0.20.3
Bone surface5.09.114.3-0.93.5-3.8
Bone volume5.29.414.9-1.23.4-3.9
Breakpoint value in progressive ratio session0.40.51.21.10.4-0.1
Number of licking bursts1.82.93.3-1.6-1.81.7
Context. condit. distance diff. score0.20.20.3-0.5-0.40.6
Locomotion velocity, session 11.51.62.8-0.61.3-1.7
Locomotion distance, session 12.12.74.9-0.11.8-2.2
Locomotion velocity, session 23.43.96.40.62.2-2.5
Locomotion distance, session 24.05.58.01.52.5-2.8
Locomotion velocity, session 31.92.25.92.40.9-0.1
Locomotion distance, session 30.10.10.20.5-0.1-0.0
Stereotopy head waving bouts, day 32.73.25.82.41.6-1.2
Stereotopy head waving duration, day 31.61.93.31.81.2-0.9
Locomotion velocity, session 70.20.20.30.00.6-0.5
Locomotion distance, session 70.60.71.3-0.0-1.01.1
Stereotopy head waving bouts, day 71.41.52.50.71.6-1.3
Stereotopy head waving duration, day 71.72.03.30.51.8-1.6
Locomotion velocity, session 82.83.44.80.82.2-2.2
Locomotion distance, session 80.40.60.70.60.8-0.8
Degree of sensitization distance0.30.40.8-0.9-0.30.5
Degree of sensitization stereotypy0.50.60.9-0.40.8-0.9
Conditioned locomotion1.72.03.3-0.4-1.81.6
Cocaine response after cond. corrected2.42.94.1-1.2-2.01.7
Cocaine response after cond. not corrected2.53.04.4-1.2-2.11.8
Cocaine response before conditioning0.40.50.60.80.8-0.6
Saline control response0.40.51.0-0.4-1.00.5
Bone: connectivity density1.62.44.4-0.61.6-2.1
Bone: cortical apparent density0.60.82.2-1.5-0.4-0.0
Bone: cortical area1.42.12.5-1.61.2-1.5
Bone: cortical porosity0.40.40.6-0.20.7-0.8
Bone: cortical porosity0.91.01.4-0.71.0-1.2
Bone: cortical thickness0.91.53.8-1.90.3-0.8
Bone: cortical thickness0.50.60.9-0.6-0.90.7
Bone: cortical tissue density0.40.61.6-1.3-0.3-0.1
Condit. Reinf. active minus inactive responses0.80.91.91.40.8-0.5
Condit. Reinf. active-inactive response ratio0.10.20.30.5-0.30.3
Condit. Reinf. active responses1.82.22.71.61.6-1.2
Condit. Reinf. inactive responses1.62.03.31.11.8-1.2
Incentive salience index mean1.11.41.81.01.3-1.2
Condit. Reinf. lever presses1.72.43.60.21.9-1.9
Condit. Reinf. active minus inactive responses1.21.63.92.0-0.30.9
Condit. Reinf. active-inactive response ratio1.82.02.81.4-1.21.7
Condit. Reinf. active responses0.60.92.41.50.40.1
Condit. Reinf. inactive responses0.40.50.80.40.9-0.6
Condit. Reinf. lever presses1.11.54.32.10.00.5
Condit. Reinf. lever reinforcers received0.50.72.01.40.00.5
Conditioned reinforcement - actives0.10.20.7-0.8-0.20.1
Conditioned reinforcement - inactives0.60.81.0-0.9-1.00.8
Conditioned locomotion0.60.81.30.81.1-0.8
Patch foraging indifference point 0 sec1.62.98.4-2.9-0.4-0.4
Patch foraging indifference point AUC0.40.51.41.20.10.4
Delay disc. indifference point, 0s delay2.02.22.9-1.71.1-1.5
Delay disc. indifference point, 16s delay0.10.20.20.50.4-0.3
Delay disc. indifference point, 2s delay0.50.50.7-0.70.7-0.8
Delay disc. indifference point, 24s delay0.00.00.1-0.4-0.10.0
Delay disc. indifference point, 4s delay0.80.81.30.21.2-1.1
Delay disc. indifference point, 8s delay0.40.40.6-0.3-0.80.8
Indifference point function ln k0.10.10.3-0.6-0.2-0.2
Indifference point function log k0.10.10.3-0.6-0.2-0.2
Patch foraging total patch changes 0 sec1.42.67.5-2.7-0.4-0.3
Patch foraging total patch changes 12 sec1.01.31.8-1.3-1.20.8
Patch foraging total patch changes 18 sec0.00.10.1-0.20.2-0.3
Patch foraging total patch changes 24 sec0.20.30.8-0.90.3-0.3
Patch foraging total patch changes 6 sec0.81.23.6-1.9-0.40.1
Patch foraging time to switch 0 sec0.30.60.8-0.80.6-0.9
Patch foraging water rate 0 sec0.61.21.7-0.5-1.31.3
Patch foraging water rate 12 sec0.61.22.0-0.8-1.41.0
Patch foraging water rate 18 sec2.33.65.60.7-2.22.4
Patch foraging water rate 24 sec4.26.08.9-0.5-3.03.0
Patch foraging water rate 6 sec1.21.72.51.1-1.21.6
Seeking ratio, delayed vs. immediate footshock0.81.01.50.71.2-1.0
Distance traveled before self-admin0.60.81.71.30.7-0.4
Distance traveled after self-admin0.00.00.10.30.00.0
Extensor digitorum longus weight2.610.217.0-4.1-3.31.7
Bone: elastic displacement0.00.10.1-0.20.2-0.3
Bone: elastic work0.60.71.7-1.30.3-0.6
Bone: endosteal estimation0.40.82.4-1.50.4-0.2
Bone: endosteal perimeter0.61.32.10.11.4-1.3
Epididymis fat weight0.30.91.20.6-1.01.1
Delta time in closed arm before/after self-admin3.83.65.5-0.7-2.32.2
Delta time in open arm before/after self-admin0.20.20.5-0.7-0.40.2
Diff in mean of infusions in LGA sessions0.70.92.41.60.4-0.0
Delay discount exponential model param0.00.00.00.1-0.20.2
Extinction: sum of active levers before priming1.01.12.31.5-0.40.8
Active lever presses in extinction session 60.20.20.30.30.5-0.5
Bone: final force1.62.66.6-2.60.7-0.9
Bone: final moment1.62.66.6-2.60.7-0.9
Food consumed during 24 hour testing period0.10.20.4-0.7-0.20.1
Glucose0.50.71.5-1.2-0.70.5
Heart weight0.20.40.50.7-0.60.6
Delay discount hyperbolic model param0.10.20.20.4-0.30.4
Intermittent access intake day 1-15 change0.20.40.60.7-0.50.7
Intermittent access intake escalation0.20.40.60.8-0.50.7
Intermittent access intake escalation 20.30.41.11.0-0.00.3
Intermitt. access day 1 inactive lever presses0.62.12.41.5-1.31.5
Intermitt. access day 15 inactive lever presses0.30.51.51.20.10.2
Intermitt. access escalation Index0.40.50.8-0.20.8-0.9
Intermittent access day 1 total infusions0.10.20.3-0.5-0.60.4
Intermittent access day 15 total infusions0.00.00.1-0.3-0.0-0.0
Intermittent access terminal intake (last 3 days)0.20.30.4-0.40.6-0.6
Intermittent access total infusions0.20.20.7-0.8-0.0-0.1
Intermittent access day 1 locomotion0.50.71.00.1-1.01.0
Intermittent access day 15 total locomotion0.10.20.30.2-0.40.5
Intermittent access total locomotion0.10.10.1-0.0-0.30.4
Intermittent access standard deviation0.20.50.60.70.8-0.6
Left kidney weight0.00.20.30.2-0.40.6
Right kidney weight0.20.71.21.1-0.50.9
Cocaine induced anxiety1.62.33.41.01.9-1.6
Post-drug Anxiety3.03.25.00.32.2-2.2
Baseline Anxiety0.00.00.0-0.10.0-0.1
Tail length1.66.117.24.11.00.3
Length with tail0.73.28.93.00.10.8
Length without tail0.20.71.1-0.7-1.00.8
Times rat made contact with spout0.70.91.2-0.8-1.10.8
Lifetime Intake0.60.82.2-1.5-0.0-0.3
Liver weight, left0.30.40.9-0.9-0.60.3
Liver weight, right0.30.50.70.8-0.40.8
Locomotor activity2.13.33.81.92.0-1.5
Locomotor testing distance0.91.62.21.21.5-1.1
Locomotor testing rearing0.10.10.20.3-0.30.4
Locomotion in novel chamber0.00.00.0-0.1-0.10.1
Locomotion in novel chamber post-restriction1.82.97.42.71.1-0.5
Fecal boli incidents, locomotor time 10.60.91.4-0.3-1.21.0
Change in fecal boli incidents, locomotor task1.61.62.40.51.6-1.4
Time >=10cm from walls, locomotor time 10.91.01.2-0.90.9-1.1
Bouts of movement, locomotor time 10.30.30.91.00.10.1
Total resting periods, locomotor time 10.60.61.71.30.4-0.1
Rest time, locomotor task time 10.50.60.80.90.9-0.6
Distance moved, locomotor task time 11.01.42.3-1.50.9-1.1
Vertical activity count, locomotor time 10.51.23.0-1.7-0.70.2
Time >=10cm from walls, locomotor time 20.60.81.0-0.8-1.00.9
Bouts of movement, locomotor time 20.60.91.40.21.1-1.2
Total resting periods, locomotor time 20.71.21.90.21.3-1.4
Rest time, locomotor task time 20.50.71.00.31.0-1.0
Distance moved, locomotor task time 20.50.60.9-0.2-0.81.0
Vertical activity count, locomotor time 21.41.92.7-1.0-1.61.4
Light reinforcement 11.33.35.12.31.8-1.3
Light reinforcement 20.50.81.31.20.8-0.7
Bone: marrow area0.30.72.1-1.40.4-0.2
Bone: maximum diameter1.12.13.20.21.8-1.8
Bone: maximum force1.42.56.7-2.60.4-0.8
Bone: maximum moment1.42.56.8-2.60.4-0.8
Mean time between licks in bursts0.10.30.90.9-0.10.1
Mean num. licks in bursts0.50.70.90.80.8-0.9
Cd content in liver0.00.10.10.30.2-0.2
Co content in liver1.11.23.61.90.10.1
Cu content in liver0.91.11.3-1.01.0-1.2
Fe content in liver0.30.40.4-0.5-0.60.6
K content in liver1.01.01.30.51.2-1.1
Mg content in liver0.80.81.01.01.0-0.7
Mn content in liver4.24.77.50.52.7-2.5
Na content in liver0.50.50.8-0.40.8-0.9
Rb content in liver1.01.11.5-0.71.1-1.2
Se content in liver0.00.00.00.00.0-0.2
Sr content in liver0.40.40.70.3-0.60.8
Zn content in liver2.73.05.72.4-1.01.5
Bone: minimum diameter0.71.31.9-1.11.0-1.4
Time in familiar zone, hab. session 12.22.16.22.50.40.3
Time in novel zone, hab. session 12.22.25.3-2.30.5-1.0
Total zone transitions, hab. session 11.72.44.10.31.7-2.0
Total locomotion distance, hab. session 13.85.47.80.92.7-2.8
Locomotion velocity, hab. session 13.04.26.11.12.3-2.5
Time in familiar zone, hab. session 22.52.67.22.7-0.10.8
Time in novel zone, hab. session 23.03.18.0-2.80.3-1.0
Total zone transitions, hab. session 22.73.56.3-1.31.5-2.5
Total locomotion distance, hab. session 21.51.93.50.31.5-1.9
Locomotion velocity, hab. session 22.12.85.10.31.8-2.3
Novel to familiar place preference ratio1.92.14.6-2.10.7-1.1
Novelty place preference1.51.73.3-1.80.8-1.1
Time in novel zone, NPP test1.71.84.1-2.00.6-1.0
Total zone transitions, NPP test0.81.22.1-0.90.8-1.4
Total locomotion distance, NPP test1.21.63.1-0.51.2-1.8
Locomotion velocity, NPP test1.11.52.8-0.11.3-1.7
Intraocular pressure1.11.62.21.1-1.11.5
Delta distance traveled before/after self-admin0.30.30.4-0.6-0.60.4
Delta ambulatory time before/after self-admin0.20.20.7-0.8-0.1-0.1
Parametrial fat weight0.10.30.8-0.9-0.1-0.1
Pavlov. Cond. lever latency1.41.72.90.3-1.51.7
Pavlov. Cond. magazine entry latency0.50.71.71.30.5-0.2
Pavlov. Cond. change in total contacts0.10.10.3-0.6-0.00.1
Pavlov. Cond. index score0.60.71.00.51.0-1.0
Pavlov. Cond. latency score1.01.31.80.41.3-1.3
Pavlov. Cond. lever contacts1.21.42.4-0.51.3-1.5
Pavlov. Cond. magazine entry number0.20.30.8-0.9-0.2-0.1
Pavlov. Cond. intertrial magazine entries0.80.91.70.5-0.91.3
Pavlov. Cond. lever-magazine prob. diff.0.50.60.90.50.9-0.8
Pavlov. Cond. response bias0.20.20.60.70.3-0.0
Pavlov. Cond. lever latency0.70.92.3-1.5-0.70.2
Pavlov. Cond. magazine entry latency0.91.12.61.60.9-0.2
Pavlov. Cond. change in total contacts0.20.30.90.90.20.3
Pavlov. Cond. index score0.71.02.51.60.60.1
Pavlov. Cond. latency score0.91.22.71.60.8-0.2
Pavlov. Cond. lever contacts0.60.82.31.50.30.2
Pavlov. Cond. magazine entry number0.91.12.5-1.6-0.90.1
Pavlov. Cond. intertrial magazine entries0.50.81.1-0.9-1.10.7
Pavlov. Cond. lever-magazine prob. diff.0.81.12.71.60.8-0.1
Pavlov. Cond. response bias0.91.23.41.80.40.4
Time in closed arm before self-admin0.60.81.2-0.51.0-1.1
Time in closed arm after self-admin0.30.30.6-0.8-0.50.3
Time in open arm before self-admin0.00.00.0-0.0-0.20.1
Time in open arm after self-admin0.80.81.1-1.0-1.00.7
Bone: periosteal estimation1.12.33.9-2.01.1-1.3
Bone: periosteal perimeter1.11.92.9-0.71.6-1.7
Bone: post-yield work0.30.40.8-0.9-0.30.6
Progressive ratio test 1 active lever presses0.40.50.9-1.0-0.60.4
Progressive ratio test 1 breakpoint0.40.50.9-0.9-0.60.4
Progressive ratio test 1 inactive lever presses0.00.00.10.20.1-0.0
Progressive ratio test 2 active lever presses0.00.00.1-0.30.1-0.1
Progressive ratio test 2 breakpoint0.00.00.0-0.20.2-0.1
Progressive ratio test 2 inactive lever presses0.30.61.1-1.10.5-0.6
Incentive Sensitization - Responses0.10.10.20.50.20.0
Incentive Sensitization - Breakpoint0.10.20.40.60.4-0.2
Sum of active levers in priming session hrs 5-60.10.10.20.4-0.00.1
Progressive ratio0.61.01.2-1.0-1.10.9
Food seeking constrained by brief footshock0.91.13.21.80.5-0.0
Seeking ratio, punishment vs. effort1.11.53.51.90.9-0.5
Retroperitoneal fat weight1.35.67.2-2.3-2.72.1
Reaction time number correct0.81.62.2-0.7-1.51.5
Reaction time mean minus median0.40.92.11.40.7-0.4
Reaction time mean minus median AUC1.02.43.81.11.9-1.5
Reaction time num false alarms0.30.40.7-0.8-0.60.5
Reaction time num false alarms AUC0.40.60.8-0.7-0.90.7
Reaction time trials correct on left0.81.62.2-0.7-1.51.5
Reaction time trials on left0.81.52.0-0.7-1.41.4
Reaction time mean1.01.62.11.01.5-1.3
Reaction time mean AUC0.71.11.60.51.2-1.2
Median of all reaction times0.81.21.70.61.3-1.2
Reaction time omissions0.20.30.5-0.20.7-0.7
Reaction time false alarm rate0.10.10.2-0.40.1-0.3
Reaction time premature initiation rate0.91.22.91.7-0.40.8
Reaction time premature initiations1.12.02.71.3-1.31.6
Std. dev. reaction times0.50.91.20.91.1-0.9
Reaction time trials completed0.81.52.0-0.7-1.41.4
Reaction time trials AUC1.01.92.7-0.7-1.61.6
Run reversals in cocaine runway, females1.81.82.41.61.5-0.9
Run reversals in cocaine runway, males1.71.72.31.31.5-1.2
Latency to leave start box in cocaine runway1.31.42.0-0.91.2-1.4
Latency to leave start box in cocaine runway, F2.12.43.6-1.01.7-1.9
Latency to leave start box in cocaine runway, M0.20.20.3-0.1-0.50.5
Std. dev. time between licks in bursts0.91.21.80.51.4-1.3
Total sessions with >9 infusions0.50.61.7-1.30.1-0.3
Short access day 1 total inactive lever presses0.30.40.70.8-0.30.5
Short access day 10 total inactive lever presses0.81.92.51.1-1.41.6
Short access day 1 total infusions0.40.51.5-1.2-0.0-0.3
Short access day 10 total infusions0.10.10.2-0.5-0.30.2
Short access total infusions0.70.92.4-1.60.0-0.4
Short access day 1 locomotion0.10.10.20.5-0.20.4
Short access day 10 total locomotion1.12.03.51.9-0.91.3
Short access total locomotion0.20.20.20.5-0.40.5
One hour access (0.3 mA shock)0.30.30.5-0.7-0.50.4
Compulsive drug intake0.10.10.20.00.4-0.4
One hour access (shock baseline)0.10.10.1-0.1-0.30.3
Social response proportion0.80.91.51.20.9-0.5
Social responses5.16.612.43.52.3-1.4
Social time0.60.81.0-0.9-1.00.7
Soleus weight2.57.318.3-4.3-1.80.3
Bone: stiffness1.62.77.9-2.8-0.1-0.1
Tibialis anterior weight0.51.84.4-2.1-1.00.1
Time to tail flick, vehicle, before self-admin1.21.31.80.81.3-1.2
Time to tail flick, vehicle, after self-admin1.11.51.81.3-1.01.3
Time to tail flick, test, before self-admin1.31.32.10.31.4-1.3
Time to tail flick, test, after self-admin0.20.20.4-0.20.5-0.6
Delta time to tail flick, vehicle, before/after SA2.32.23.4-0.2-1.91.7
Delta time to tail flick, test, before/after SA1.01.01.50.4-1.21.2
Tibia length0.51.33.81.90.20.3
Ambulatory time before self-admin0.10.20.50.70.3-0.1
Ambulatory time after self-admin0.00.00.00.10.1-0.1
Bone: tissue strength2.52.57.2-2.7-0.4-0.2
Total heroin consumption1.31.52.61.61.2-0.8
Bone: trabecular number1.52.54.10.31.8-2.0
Bone: trabecular spacing3.24.26.70.2-2.42.6
Bone: trabecular thickness5.97.311.1-1.33.1-3.3
Bone: trabecular tissue density2.94.26.6-2.6-1.91.6
Water consumed over 24 hours0.60.81.2-1.10.6-0.9
Number of responses in last shaping day0.60.71.91.4-0.10.5