Best TWAS P=3.69e-08 · Best GWAS P=4.15e-08 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLA | Cep63 | alternative polyA | XM_039081200.1 | 0.07 | 1724 | 0.06 | 5.3e-04 | -5.39 | 6.89e-08 | 0.53 | FALSE |
| BLA | Cep63 | alternative polyA | XM_039081200.1 | 0.08 | 1724 | 0.05 | 7.3e-04 | -5.37 | 8.08e-08 | 0.54 | FALSE |
| LHb | Cep63 | alternative polyA | XM_039081201.1 | 0.2 | 1724 | 0.09 | 3.4e-03 | -5.36 | 8.17e-08 | 0.57 | FALSE |
| LHb | Cep63 | alternative polyA | XM_039081201.1 | 0.2 | 1724 | 0.1 | 3.0e-03 | -5.37 | 7.78e-08 | 0.58 | FALSE |
| LHb | Amotl2 | gene expression | Amotl2 | 0.36 | 1758 | 0.24 | 2.5e-06 | 5.47 | 4.40e-08 | 0.72 | FALSE |
| Liver | Slco2a1 | alternative TSS | NM_022667.3 | 0.15 | 1 | 0.09 | 5.7e-10 | 5.18 | 2.21e-07 | 0.86 | FALSE |
| Liver | Slco2a1 | intron excision ratio | chr8_103637317_103654517 | 0.09 | 1 | 0.03 | 5.2e-04 | 5.18 | 2.21e-07 | 0.42 | FALSE |
| Liver | Slco2a1 | intron excision ratio | chr8_103641675_103654517 | 0.07 | 1 | 0.01 | 4.9e-02 | -5.18 | 2.21e-07 | 0.06 | FALSE |
| NAcc | Cep63 | intron excision ratio | chr8_103165082_103165787 | 0.03 | 1724 | 0.01 | 1.4e-02 | 5.5 | 3.69e-08 | 0.59 | TRUE |