Best TWAS P = 1.56e-08 · Best GWAS P= 7.42e-09 conditioned to 2.67e-46
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Ahr | gene expression | Ahr | 0.11 | 56 | 0.07 | 6.8e-08 | 5.58 | 2.46e-08 | 0.1 | FALSE |
| Liver | Hdac9 | alternative TSS | XM_063262492.1 | 0.03 | 1 | 0.02 | 3.0e-03 | -5.64 | 1.66e-08 | 0.18 | FALSE |
| Liver | Ahr | mRNA stability | Ahr | 0.02 | 2918 | 0.01 | 1.4e-02 | 5.3 | 1.18e-07 | 0.16 | FALSE |
| PL | Hdac9 | alternative polyA | NM_001200045.1 | 0.03 | 2250 | 0.02 | 1.2e-03 | -5.55 | 2.90e-08 | 0.27 | FALSE |
| PL | Hdac9 | alternative polyA | XM_063262499.1 | 0.05 | 2250 | 0.04 | 3.1e-05 | 5.65 | 1.56e-08 | 0.22 | TRUE |
| PL | Hdac9 | alternative polyA | XM_063262503.1 | 0.05 | 2250 | 0.04 | 1.9e-05 | -5.59 | 2.26e-08 | 0.23 | FALSE |
| pVTA | Hdac9 | gene expression | Hdac9 | 0.09 | 2250 | 0.06 | 6.2e-06 | 5.27 | 1.37e-07 | 0.82 | FALSE |
| pVTA | Crppa | isoform ratio | NM_001008386.1 | 0.04 | 13 | 0.02 | 4.9e-03 | 5.32 | 1.06e-07 | 0.49 | FALSE |