Best TWAS P = 2.30e-09 · Best GWAS P= 2.46e-08 conditioned to 4.53e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLA | Mocs2 | isoform ratio | NM_001162413.1 | 0.15 | 2156 | 0.1 | 6.2e-06 | 5.81 | 6.36e-09 | 0.5 | FALSE |
| BLA | Mocs2 | intron excision ratio | chr2_48240511_48244119 | 0.22 | 2156 | 0.18 | 5.9e-10 | 5.25 | 1.52e-07 | 0.22 | FALSE |
| Brain | Pelo | gene expression | Pelo | 0.04 | 2878 | 0.03 | 1.0e-03 | 5.86 | 4.64e-09 | 0.4 | FALSE |
| Brain | Mocs2 | intron excision ratio | chr2_48240511_48244119 | 0.17 | 27 | 0.18 | 4.0e-16 | 5.72 | 1.07e-08 | 0.3 | FALSE |
| IC | Pelo | gene expression | Pelo | 0.13 | 1 | 0.11 | 2.2e-05 | -5.32 | 1.06e-07 | 0.31 | FALSE |
| IC | Mocs2 | intron excision ratio | chr2_48240511_48244119 | 0.33 | 53 | 0.27 | 1.3e-11 | 5.58 | 2.38e-08 | 0.33 | FALSE |
| LHb | Mocs2 | intron excision ratio | chr2_48240511_48244119 | 0.29 | 2156 | 0.14 | 4.3e-04 | 5.98 | 2.30e-09 | 0.44 | TRUE |
| Liver | Mocs2 | intron excision ratio | chr2_48238933_48240334 | 0.14 | 38 | 0.16 | 6.2e-17 | 5.57 | 2.48e-08 | 0.6 | FALSE |
| Liver | Mocs2 | mRNA stability | Mocs2 | 0.05 | 1 | 0.04 | 1.1e-05 | -5.39 | 7.02e-08 | 0.77 | FALSE |
| NAcc | Itga1 | gene expression | Itga1 | 0.03 | 2561 | 0.03 | 3.6e-05 | 5.25 | 1.55e-07 | 0.4 | FALSE |
| NAcc | Mocs2 | isoform ratio | NM_001395669.1 | 0.22 | 28 | 0.27 | 2.1e-41 | -5.31 | 1.13e-07 | 0.32 | FALSE |
| NAcc | Mocs2 | intron excision ratio | chr2_48240511_48244119 | 0.28 | 19 | 0.26 | 6.1e-40 | 5.4 | 6.52e-08 | 0.39 | FALSE |
| PL | Itga1 | gene expression | Itga1 | 0.03 | 2561 | 0.03 | 5.5e-04 | 5.73 | 9.81e-09 | 0.29 | FALSE |
| pVTA | Pelo | gene expression | Pelo | 0.12 | 2864 | 0.12 | 6.3e-10 | 5.39 | 7.01e-08 | 0.5 | FALSE |
| pVTA | Mocs2 | intron excision ratio | chr2_48238933_48240334 | 0.04 | 1 | 0.03 | 2.2e-03 | 5.31 | 1.12e-07 | 0.08 | FALSE |
| pVTA | Mocs2 | intron excision ratio | chr2_48240511_48244119 | 0.16 | 20 | 0.09 | 9.8e-08 | 5.35 | 8.67e-08 | 0.49 | FALSE |