Best TWAS P=8.13e-12 · Best GWAS P=7.40e-12 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Brain | Pclo | alternative polyA | ENSRNOT00000007608 | 0.08 | 6 | 0.04 | 2.3e-04 | -5.91 | 3.42e-09 | 0.62 | FALSE |
Brain | Pclo | alternative polyA | ENSRNOT00000008637 | 0.08 | 6 | 0.04 | 1.9e-04 | 5.88 | 4.19e-09 | 0.61 | FALSE |
Brain | Cacna2d1 | gene expression | ENSRNOG00000033531 | 0.05 | 1 | 0.06 | 5.7e-06 | -6.84 | 8.13e-12 | 0.47 | TRUE |
Brain | Pclo | isoform ratio | ENSRNOT00000007608 | 0.05 | 29 | 0.03 | 1.0e-03 | -5.9 | 3.59e-09 | 0.48 | FALSE |
Brain | Pclo | isoform ratio | ENSRNOT00000008637 | 0.05 | 30 | 0.03 | 5.5e-04 | 5.82 | 5.78e-09 | 0.5 | FALSE |
Brain | Pclo | mRNA stability | ENSRNOG00000005726 | 0.28 | 64 | 0.24 | 4.1e-22 | 5.62 | 1.87e-08 | 0.19 | FALSE |
IL | Hgf | gene expression | ENSRNOG00000007027 | 0.45 | 18 | 0.34 | 6.6e-09 | -5.16 | 2.41e-07 | 0 | FALSE |
LHb | Pclo | intron excision ratio | chr4:19838555:19842972 | 0.18 | 6 | 0.05 | 2.9e-02 | -5.46 | 4.87e-08 | 0.22 | FALSE |
NAcc | Cacna2d1 | gene expression | ENSRNOG00000033531 | 0.81 | 2673 | 0.04 | 8.0e-04 | -5.29 | 1.24e-07 | 0.41 | FALSE |