Best TWAS P=8.13e-12 · Best GWAS P=7.40e-12 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Brain | Hgf | alternative polyA | XM_039107017.1 | 0.03 | 1 | 0.04 | 2.7e-04 | 6.41 | 1.44e-10 | 0.03 | FALSE |
| Brain | Pclo | alternative polyA | NM_001110797.2 | 0.05 | 1 | 0.03 | 8.3e-04 | 5.58 | 2.38e-08 | 0.03 | FALSE |
| Brain | Pclo | alternative polyA | XM_039108295.1 | 0.05 | 1 | 0.03 | 6.6e-04 | -5.58 | 2.38e-08 | 0.03 | FALSE |
| Brain | Cacna2d1 | gene expression | Cacna2d1 | 0.15 | 1 | 0.19 | 4.9e-17 | 6.84 | 8.13e-12 | 0.56 | TRUE |
| Brain | Pclo | mRNA stability | Pclo | 0.37 | 28 | 0.27 | 7.9e-25 | -5.57 | 2.48e-08 | 0.05 | FALSE |
| LHb | Pclo | mRNA stability | Pclo | 0.37 | 1 | 0.12 | 1.0e-03 | -5.74 | 9.49e-09 | 0.05 | FALSE |
| Liver | Hgf | gene expression | Hgf | 0.03 | 2341 | 0.02 | 6.0e-03 | -5.81 | 6.32e-09 | 0.16 | FALSE |
| NAcc | Cacna2d1 | gene expression | Cacna2d1 | 0.53 | 2684 | 0.16 | 9.9e-18 | -6.32 | 2.55e-10 | 0.42 | FALSE |
| PL | Pclo | isoform ratio | NM_001110797.2 | 0.18 | 1 | 0.06 | 2.1e-07 | 5.38 | 7.35e-08 | 0.01 | FALSE |