Best TWAS P=1.26e-07 · Best GWAS P=6.79e-08 conditioned to 1.05e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | Ilrun | gene expression | Ilrun | 0.76 | 132 | 0.54 | 7.2e-72 | 5.25 | 1.54e-07 | 0.9 | FALSE |
| Adipose | LOC103694391 | gene expression | LOC103694391 | 0.62 | 149 | 0.4 | 1.1e-46 | 5.28 | 1.29e-07 | 0.9 | FALSE |
| Adipose | Spdef | gene expression | Spdef | 0.11 | 1 | 0.04 | 1.6e-05 | 5.28 | 1.26e-07 | 0.6 | FALSE |
| LHb | Ilrun | gene expression | Ilrun | 0.81 | 1 | 0.27 | 3.3e-07 | 5.21 | 1.92e-07 | 0.64 | FALSE |
| Liver | Snrpc | alternative TSS | XM_039098816.1 | 0.26 | 1 | 0.09 | 2.5e-10 | -5.28 | 1.26e-07 | 0.9 | TRUE |
| Liver | Snrpc | gene expression | Snrpc | 0.83 | 130 | 0.37 | 2.0e-42 | -5.22 | 1.75e-07 | 0.9 | FALSE |
| Liver | Snrpc | isoform ratio | XM_039098816.1 | 0.31 | 1 | 0.12 | 6.8e-13 | -5.28 | 1.26e-07 | 0.9 | FALSE |
| Liver | Snrpc | intron excision ratio | chr20_5896094_5896392 | 0.39 | 150 | 0.21 | 2.7e-23 | 5.26 | 1.47e-07 | 0.9 | FALSE |
| Liver | Snrpc | intron excision ratio | chr20_5896204_5896392 | 0.51 | 159 | 0.37 | 7.5e-43 | -5.2 | 2.04e-07 | 0.9 | FALSE |