Best TWAS P=1.27e-08 · Best GWAS P=2.04e-09 conditioned to 6.83e-03
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| LHb | Hdac9 | alternative polyA | XM_039112951.1 | 0.26 | 196 | 0.05 | 2.6e-02 | -5.27 | 1.38e-07 | 0.17 | FALSE |
| NAcc | Hdac9 | intron excision ratio | chr6_51119580_51124715 | 0.04 | 88 | 0.02 | 3.0e-03 | -5.47 | 4.50e-08 | 0.6 | FALSE |
| PL | Hdac9 | alternative polyA | NM_001200045.1 | 0.03 | 2201 | 0.02 | 2.9e-03 | -5.66 | 1.56e-08 | 0.25 | FALSE |
| PL | Hdac9 | alternative polyA | XM_039112951.1 | 0.03 | 2201 | 0.02 | 4.0e-03 | 5.65 | 1.64e-08 | 0.24 | FALSE |
| PL | Hdac9 | alternative polyA | XM_039112951.1 | 0.05 | 2201 | 0.03 | 1.5e-04 | 5.69 | 1.27e-08 | 0.18 | TRUE |