Hub : Traits : Tibia length : ← : →

chr7:28,462,991-32,566,822

Trait: Tibia length

Best TWAS P = 2.28e-10 · Best GWAS P= 2.66e-10 conditioned to 0.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Cdk17	alternative polyA	NM_001108082.2	0.03	3061	0.01	9.6e-03	-5.41	6.31e-08	0.37	FALSE
Adipose	Nr2c1	alternative polyA	NM_145780.2	0.04	2860	0.03	2.0e-04	-5.41	6.19e-08	0.27	FALSE
Adipose	Nr2c1	alternative polyA	XM_039078458.1	0.04	2860	0.03	2.5e-04	5.4	6.56e-08	0.27	FALSE
Adipose	LOC134479659	gene expression	LOC134479659	0.04	1	0.02	4.8e-03	-5.27	1.40e-07	0.12	TRUE
Adipose	Ndufa12	gene expression	Ndufa12	0.4	158	0.23	5.0e-25	5.51	3.52e-08	0.17	TRUE
Adipose	Vezt	gene expression	Vezt	0.1	1	0.08	3.4e-09	5.49	3.97e-08	0.18	FALSE
Adipose	Nr2c1	isoform ratio	XM_039078459.2	0.02	2860	0.01	1.6e-02	6.06	1.34e-09	0.32	FALSE
Adipose	Cep83	intron excision ratio	chr7_31209896_31212408	0.03	14	0.03	3.4e-04	-6	1.93e-09	0.57	TRUE
Adipose	Nedd1	mRNA stability	Nedd1	0.07	2923	0.07	4.1e-08	-5.25	1.52e-07	0.53	TRUE
Adipose	Vezt	mRNA stability	Vezt	0.06	2707	0.08	3.9e-09	-5.77	8.12e-09	0.62	FALSE
BLA	Nr2c1	alternative polyA	NM_145780.2	0.06	1	0.06	5.2e-04	5.29	1.21e-07	0.04	FALSE
BLA	Nr2c1	alternative polyA	XM_039078458.1	0.06	1	0.06	5.2e-04	-5.29	1.21e-07	0.04	FALSE
BLA	Nr2c1	alternative TSS	XM_039078459.2	0.13	2860	0.02	1.8e-02	-5.63	1.81e-08	0.47	FALSE
BLA	Fgd6	gene expression	Fgd6	0.08	1	0.09	1.9e-05	5.71	1.11e-08	0.23	FALSE
BLA	Metap2	gene expression	Metap2	0.1	9	0.09	2.5e-05	5.54	3.01e-08	0.21	FALSE
BLA	Mir331	gene expression	Mir331	0.06	14	0.07	1.2e-04	5.89	3.92e-09	0.31	FALSE
BLA	Ntn4	gene expression	Ntn4	0.06	2576	0.05	1.7e-03	5.76	8.29e-09	0.29	TRUE
BLA	Vezt	gene expression	Vezt	0.32	64	0.34	1.0e-18	6.27	3.68e-10	0.64	FALSE
BLA	Nr2c1	isoform ratio	NM_145780.2	0.04	2860	0.03	1.1e-02	-5.99	2.12e-09	0.26	FALSE
BLA	Vezt	mRNA stability	Vezt	0.25	51	0.33	3.7e-18	-6.12	9.29e-10	0.64	FALSE
Brain	Nr2c1	alternative polyA	NM_145780.2	0.05	2860	0.04	1.3e-04	-6.22	4.86e-10	0.28	FALSE
Brain	Nr2c1	alternative polyA	XM_039078458.1	0.05	2860	0.04	2.0e-04	6.24	4.46e-10	0.29	FALSE
Brain	Fgd6	alternative TSS	XM_039079738.2	0.05	1	0.05	1.8e-05	-5.84	5.24e-09	0.42	FALSE
Brain	Fgd6	alternative TSS	XM_063264098.1	0.05	1	0.03	4.2e-04	5.85	5.06e-09	0.16	FALSE
Brain	Fgd6	gene expression	Fgd6	0.16	23	0.19	1.4e-17	-5.59	2.28e-08	0.18	FALSE
Brain	Ndufa12	gene expression	Ndufa12	0.44	2725	0.33	6.6e-32	-5.7	1.20e-08	0.17	FALSE
Brain	Vezt	gene expression	Vezt	0.23	45	0.23	1.1e-21	5.76	8.30e-09	0.22	FALSE
Brain	Lta4h	intron excision ratio	chr7_29884652_29886793	0.05	2416	0.03	2.1e-03	-5.63	1.75e-08	0.71	FALSE
Brain	Vezt	intron excision ratio	chr7_30423170_30425300	0.04	2707	0.03	2.1e-03	5.33	1.01e-07	0.17	TRUE
Brain	Lta4h	mRNA stability	Lta4h	0.12	2416	0.08	3.2e-08	5.38	7.53e-08	0.35	FALSE
Brain	Vezt	mRNA stability	Vezt	0.07	18	0.06	1.9e-06	-5.81	6.09e-09	0.38	FALSE
Eye	Fgd6	gene expression	Fgd6	0.45	1	0.06	4.6e-02	5.64	1.67e-08	0.05	FALSE
IC	Nr2c1	alternative polyA	NM_145780.2	0.21	2832	0.15	8.5e-07	-5.9	3.71e-09	0.19	FALSE
IC	Nr2c1	alternative polyA	XM_039078458.1	0.21	2832	0.16	4.0e-07	5.99	2.11e-09	0.2	TRUE
IC	Fgd6	gene expression	Fgd6	0.07	2699	0.04	7.5e-03	-6.15	7.54e-10	0.45	FALSE
IC	Ndufa12	gene expression	Ndufa12	0.29	69	0.18	3.9e-08	5.57	2.58e-08	0.2	TRUE
IC	Vezt	gene expression	Vezt	0.25	2699	0.2	5.8e-09	-6.1	1.04e-09	0.38	FALSE
IC	Nr2c1	isoform ratio	NM_145780.2	0.11	2832	0.11	1.7e-05	-5.94	2.93e-09	0.21	FALSE
IC	Vezt	intron excision ratio	chr7_30423170_30425300	0.06	1	0.02	5.6e-02	-5.33	9.74e-08	0.04	FALSE
IC	Vezt	mRNA stability	Vezt	0.17	1	0.11	2.3e-05	5.52	3.32e-08	0.12	FALSE
LHb	LOC120093559	gene expression	LOC120093559	0.31	1	0.05	2.3e-02	-5.43	5.50e-08	0.05	FALSE
Liver	Nr2c1	alternative polyA	NM_145780.2	0.08	1	0.08	1.3e-09	5.69	1.30e-08	0.37	FALSE
Liver	Nr2c1	alternative polyA	XM_039078458.1	0.08	1	0.09	8.5e-10	-5.69	1.30e-08	0.37	FALSE
Liver	Amdhd1	gene expression	Amdhd1	0.41	44	0.37	8.4e-43	-5.57	2.51e-08	0.5	FALSE
Liver	Ndufa12	gene expression	Ndufa12	0.4	2725	0.46	2.3e-56	-5.28	1.27e-07	0.17	FALSE
Liver	Nr2c1	isoform ratio	NM_145780.2	0.09	1	0.1	2.1e-11	5.69	1.30e-08	0.37	FALSE
Liver	Ccdc38	mRNA stability	Ccdc38	0.38	37	0.35	5.9e-41	5.34	9.23e-08	0.56	FALSE
Liver	Lta4h	mRNA stability	Lta4h	0.12	2416	0.09	9.8e-10	5.6	2.08e-08	0.36	TRUE
Liver	Nr2c1	mRNA stability	Nr2c1	0.02	2860	0.01	2.8e-02	6.17	6.98e-10	0.33	TRUE
Liver	Snrpf	mRNA stability	Snrpf	0.03	2590	0.01	2.9e-02	-5.74	9.31e-09	0.53	FALSE
NAcc	Nr2c1	alternative polyA	NM_145780.2	0.05	11	0.05	3.2e-08	-5.55	2.82e-08	0.22	FALSE
NAcc	Nr2c1	alternative polyA	XM_039078458.1	0.05	17	0.05	5.0e-08	5.58	2.39e-08	0.22	FALSE
NAcc	Fgd6	gene expression	Fgd6	0.03	2699	0.02	1.6e-04	-6.27	3.58e-10	0.4	FALSE
NAcc	Lta4h	gene expression	Lta4h	0.03	2416	0.04	2.8e-06	5.58	2.40e-08	0.29	FALSE
NAcc	Vezt	gene expression	Vezt	0.06	2699	0.11	5.7e-16	-6.33	2.44e-10	0.24	FALSE
NAcc	Nr2c1	intron excision ratio	chr7_30628520_30638147	0.02	2832	0.01	1.9e-03	6.13	8.67e-10	0.33	FALSE
NAcc	Nr2c1	intron excision ratio	chr7_30638268_30645655	0.01	2832	0.01	1.6e-02	-6.17	6.97e-10	0.23	FALSE
NAcc	Tmcc3	intron excision ratio	chr7_31020582_31046371	0.06	2504	0.06	3.3e-09	-5.36	8.40e-08	0.41	TRUE
NAcc	Vezt	mRNA stability	Vezt	0.12	34	0.18	5.6e-26	5.47	4.56e-08	0.16	FALSE
OFC	Ndufa12	gene expression	Ndufa12	0.23	1	0.15	2.4e-04	5.67	1.39e-08	0.06	FALSE
OFC	Vezt	gene expression	Vezt	0.28	2707	0.21	1.1e-05	-5.46	4.87e-08	0.25	TRUE
OFC	Plxnc1	mRNA stability	Plxnc1	0.19	3252	0.08	5.7e-03	6.03	1.66e-09	0.24	FALSE
OFC	Vezt	mRNA stability	Vezt	0.53	1	0.36	2.6e-09	5.34	9.17e-08	0.06	FALSE
PL	LOC108351432	alternative polyA	XR_010053677.1	0.03	1	0.03	8.4e-04	-5.69	1.30e-08	0.13	FALSE
PL	Nr2c1	alternative polyA	NM_145780.2	0.04	18	0.04	9.4e-06	-5.53	3.14e-08	0.22	FALSE
PL	Nr2c1	alternative polyA	XM_039078458.1	0.04	14	0.04	1.6e-05	5.52	3.34e-08	0.22	FALSE
PL	Fgd6	gene expression	Fgd6	0.05	1	0.07	1.3e-08	5.38	7.51e-08	0.1	FALSE
PL	Lta4h	gene expression	Lta4h	0.03	2416	0.02	3.4e-03	5.68	1.34e-08	0.44	FALSE
PL	Mir331	gene expression	Mir331	0.03	13	0.03	5.4e-04	-5.93	3.04e-09	0.5	FALSE
PL	Ndufa12	gene expression	Ndufa12	0.06	31	0.08	3.1e-09	5.88	3.99e-09	0.27	FALSE
PL	Vezt	gene expression	Vezt	0.29	44	0.38	3.7e-43	6.17	6.72e-10	0.86	TRUE
PL	Cep83	isoform ratio	XM_063264041.1	0.02	2840	0.01	1.7e-02	-5.81	6.13e-09	0.31	FALSE
PL	Cfap54	mRNA stability	Cfap54	0.02	1	0.02	3.0e-03	5.36	8.17e-08	0.06	TRUE
PL	LOC134479863	mRNA stability	LOC134479863	0.04	3521	0.02	1.3e-03	5.84	5.34e-09	0.37	TRUE
PL	Lta4h	mRNA stability	Lta4h	0.05	2416	0.05	1.4e-06	5.71	1.13e-08	0.32	FALSE
PL	Vezt	mRNA stability	Vezt	0.12	23	0.17	4.7e-18	-5.67	1.39e-08	0.21	FALSE
pVTA	LOC108351432	alternative polyA	XR_010053676.1	0.06	2923	0.02	1.6e-02	-5.44	5.43e-08	0.37	TRUE
pVTA	Fgd6	gene expression	Fgd6	0.05	2699	0.05	5.4e-05	-6.34	2.28e-10	0.29	TRUE
pVTA	Lta4h	gene expression	Lta4h	0.05	22	0.03	3.2e-03	6.06	1.33e-09	0.4	FALSE
pVTA	Ndufa12	gene expression	Ndufa12	0.03	1	0.05	9.7e-05	5.72	1.06e-08	0.08	FALSE
pVTA	Vezt	gene expression	Vezt	0.15	22	0.17	2.6e-13	-5.8	6.61e-09	0.21	TRUE
pVTA	Cdk17	mRNA stability	Cdk17	0.04	24	0.03	3.6e-03	5.71	1.10e-08	0.12	FALSE
pVTA	Lta4h	mRNA stability	Lta4h	0.07	2416	0.06	6.7e-06	5.97	2.37e-09	0.38	FALSE