Best TWAS P=1.02e-07 · Best GWAS P=7.01e-08 conditioned to 4.95e-02
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
BLA | LOC108350383 | intron excision ratio | chr3_47822748_47823168 | 0.08 | 12 | 0.06 | 6.9e-04 | -5.24 | 1.63e-07 | 0.32 | FALSE |
Brain | LOC108350383 | intron excision ratio | chr3_47822748_47823168 | 0.09 | 20 | 0.07 | 2.1e-07 | -5.22 | 1.76e-07 | 0.67 | FALSE |
Brain | Slc4a10 | intron excision ratio | chr3_46868709_46874592 | 0.03 | 1254 | 0.02 | 5.3e-03 | 5.2 | 1.99e-07 | 0.51 | FALSE |
IL | Fap | mRNA stability | Fap | 0.21 | 1 | 0.15 | 1.9e-04 | -5.32 | 1.02e-07 | 0.41 | TRUE |
Liver | Fign | gene expression | Fign | 0.07 | 1 | 0.05 | 6.4e-06 | -5.25 | 1.51e-07 | 0.7 | FALSE |
NAcc | Slc4a10 | isoform ratio | XM_006234285.4 | 0.02 | 1254 | 0 | 9.6e-02 | 5.23 | 1.66e-07 | 0.41 | FALSE |
OFC | Fign | gene expression | Fign | 0.39 | 2435 | 0.18 | 5.3e-05 | 5.23 | 1.73e-07 | 0.38 | FALSE |
RMTg | Grb14 | mRNA stability | Grb14 | 0.2 | 2708 | 0.04 | 3.0e-02 | -5.25 | 1.56e-07 | 0.38 | FALSE |