Hub : Traits : Epididymis fat weight : ←

chr20:800,195-7,565,756

Trait: Epididymis fat weight

Best TWAS P = 1.66e-17 · Best GWAS P= 5.09e-16 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Rpp21	alternative polyA	XM_063279381.1	0.02	1	0.02	2.3e-03	-6.36	2.06e-10	0.04	FALSE
Adipose	RT1-CE10	alternative polyA	XM_063279418.1	0.32	50	0.32	5.6e-36	-5.53	3.14e-08	0	FALSE
Adipose	RT1-CE13	alternative polyA	XM_063279405.1	0.43	45	0.38	4.0e-44	5.6	2.08e-08	0.6	FALSE
Adipose	RT1-Db1	alternative polyA	NM_001008884.2	0.25	1	0.27	2.3e-30	-5.85	4.90e-09	0.67	FALSE
Adipose	RT1-Db1	alternative polyA	XM_063279016.1	0.25	159	0.27	1.9e-30	5.83	5.38e-09	0.69	FALSE
Adipose	Taf11	alternative polyA	XM_063279121.1	0.07	1	0.04	8.5e-05	-5.44	5.31e-08	0.01	FALSE
Adipose	Ddr1	alternative TSS	XM_017601559.3	0.03	12	0.01	5.2e-02	-5.99	2.16e-09	0.14	FALSE
Adipose	Dhx16	alternative TSS	NM_212496.2	0.08	1	0.04	2.7e-05	-5.63	1.84e-08	0.01	FALSE
Adipose	Dhx16	alternative TSS	XM_039098481.2	0.06	1	0.02	3.2e-03	6.38	1.74e-10	0.29	FALSE
Adipose	Dhx16	alternative TSS	NM_212496.2	0.07	1	0.04	3.4e-05	-5.66	1.51e-08	0.01	FALSE
Adipose	Dhx16	alternative TSS	XM_039098481.2	0.07	1524	0.03	2.2e-04	-6.39	1.62e-10	0.66	FALSE
Adipose	Vwa7	alternative TSS	XM_063279117.1	0.03	3718	0.01	7.7e-02	5.62	1.91e-08	0.08	FALSE
Adipose	Abcf1	gene expression	Abcf1	0.04	1500	0.02	1.8e-03	-6.15	7.82e-10	0.55	FALSE
Adipose	Bltp3a	gene expression	Bltp3a	0.59	117	0.49	1.2e-62	6.45	1.13e-10	0	FALSE
Adipose	Cdsn	gene expression	Cdsn	0.14	2309	0.09	1.8e-10	-5.94	2.82e-09	0.64	FALSE
Adipose	Fkbpl	gene expression	Fkbpl	0.13	1	0.12	4.2e-13	-5.75	8.85e-09	0.53	FALSE
Adipose	Gnl1	gene expression	Gnl1	0.07	9	0.06	6.2e-07	-5.48	4.18e-08	0.16	FALSE
Adipose	Ilrun	gene expression	Ilrun	0.75	109	0.54	6.8e-72	-8.52	1.66e-17	0.89	TRUE
Adipose	LOC102549726	gene expression	LOC102549726	0.22	24	0.15	2.7e-16	-6.56	5.53e-11	0.72	FALSE
Adipose	LOC108349032	gene expression	LOC108349032	0.03	3765	0.02	4.4e-03	-5.3	1.17e-07	0.13	FALSE
Adipose	LOC108349035	gene expression	LOC108349035	0.25	6930	0.11	1.6e-12	-5.53	3.12e-08	0.1	FALSE
Adipose	LOC120098827	gene expression	LOC120098827	0.34	2288	0.31	1.4e-35	-6.39	1.68e-10	0.67	FALSE
Adipose	LOC120098897	gene expression	LOC120098897	0.58	41	0.29	9.2e-33	-5.98	2.19e-09	0.73	FALSE
Adipose	LOC120098978	gene expression	LOC120098978	0.06	6070	0.03	1.4e-04	5.64	1.73e-08	0.38	FALSE
Adipose	Lsm2	gene expression	Lsm2	0.05	1	0.05	4.7e-06	5.54	3.08e-08	0.4	FALSE
Adipose	Nudt3	gene expression	Nudt3	0.07	115	0.01	1.0e-02	6.07	1.31e-09	0.26	FALSE
Adipose	Ppp1r10	gene expression	Ppp1r10	0.03	1532	0.02	1.9e-03	-5.82	5.80e-09	0.01	FALSE
Adipose	Rnf39	gene expression	Rnf39	0.04	2800	0.01	8.8e-03	-6.64	3.07e-11	0.52	FALSE
Adipose	Rps10	gene expression	Rps10	0.06	1	0.03	3.6e-04	6.98	2.89e-12	0.03	FALSE
Adipose	RT1-CE4	gene expression	RT1-CE4	0.5	53	0.41	7.5e-49	6.09	1.15e-09	0.59	FALSE
Adipose	RT1-Da	gene expression	RT1-Da	0.15	6985	0.07	4.4e-08	6.27	3.66e-10	0.21	FALSE
Adipose	RT1-T24-1	gene expression	RT1-T24-1	0.62	18	0.59	4.8e-82	6.16	7.12e-10	0	FALSE
Adipose	Sapcd1	gene expression	Sapcd1	0.07	1	0.05	7.7e-06	-5.48	4.14e-08	0.47	FALSE
Adipose	Smim29	gene expression	Smim29	0.02	1	0.01	9.8e-03	5.45	4.95e-08	0.03	FALSE
Adipose	Snrpc	gene expression	Snrpc	0.19	12	0.08	3.2e-09	-7.51	5.97e-14	0.89	FALSE
Adipose	Spdef	gene expression	Spdef	0.12	78	0.04	8.4e-06	-7.22	5.22e-13	0.92	FALSE
Adipose	Vwa7	gene expression	Vwa7	0.21	3718	0.11	6.1e-12	6.39	1.64e-10	0.48	FALSE
Adipose	Abhd16a	isoform ratio	XR_010060715.1	0.11	3604	0.08	3.7e-09	6.37	1.94e-10	0.45	FALSE
Adipose	Atat1	isoform ratio	NM_212498.1	0.03	1	0.01	2.3e-02	-5.55	2.83e-08	0.03	FALSE
Adipose	Bag6	isoform ratio	XM_006256090.1	0.1	1	0.05	1.7e-06	5.6	2.12e-08	0.24	FALSE
Adipose	LOC120098828	isoform ratio	XR_010060953.1	0.13	2611	0.1	3.1e-11	-6.87	6.45e-12	0.66	FALSE
Adipose	LOC120098828	isoform ratio	XR_010060954.1	0.24	2611	0.19	4.1e-21	6.65	2.99e-11	0.66	FALSE
Adipose	LOC120098829	isoform ratio	XR_010060965.1	0.22	13	0.17	4.9e-18	5.8	6.77e-09	0	FALSE
Adipose	LOC120098897	isoform ratio	XR_005497618.2	0.18	218	0.05	1.4e-06	6.55	5.89e-11	0.7	FALSE
Adipose	LOC120098897	isoform ratio	XR_005497620.2	0.17	114	0.04	2.7e-05	-6.15	7.55e-10	0.16	FALSE
Adipose	Rps10	isoform ratio	NM_031109.2	0.74	27	0.59	5.0e-81	-6.45	1.09e-10	0	FALSE
Adipose	Rps10	isoform ratio	XM_063279576.1	0.69	35	0.54	7.0e-71	6.45	1.09e-10	0	FALSE
Adipose	RT1-CE10	isoform ratio	NM_001008833.2	0.93	58	0.52	2.8e-67	5.34	9.55e-08	0	FALSE
Adipose	RT1-CE12	isoform ratio	XM_063279097.1	0.63	307	0.52	3.6e-67	-6.06	1.32e-09	0	FALSE
Adipose	RT1-CE12	isoform ratio	XM_063279099.1	0.09	2959	0.03	8.3e-04	5.71	1.14e-08	0.04	FALSE
Adipose	RT1-Da	isoform ratio	NM_001008847.2	0.13	1	0.12	5.5e-13	5.87	4.37e-09	0.69	FALSE
Adipose	RT1-Da	isoform ratio	XM_039098493.2	0.13	1	0.12	5.5e-13	-5.87	4.37e-09	0.69	FALSE
Adipose	RT1-N3	isoform ratio	XM_006255908.5	0.12	14	0.08	5.1e-09	6.04	1.55e-09	0.01	FALSE
Adipose	RT1-T24-3	isoform ratio	XM_063279402.1	0.04	1390	0.03	8.2e-04	-5.4	6.83e-08	0.64	FALSE
Adipose	RT1-T24-4	isoform ratio	NM_001008826.3	0.44	41	0.33	1.7e-37	6.72	1.84e-11	0.71	FALSE
Adipose	RT1-T24-4	isoform ratio	XM_063279395.1	0.57	71	0.65	1.4e-94	5.49	4.05e-08	0	FALSE
Adipose	Bag6	intron excision ratio	chr20_3689007_3689462	0.08	1	0.02	3.3e-03	5.62	1.96e-08	0.03	FALSE
Adipose	C4a	intron excision ratio	chr20_4022708_4023269	0.16	1	0.07	3.1e-08	-5.38	7.60e-08	0.26	FALSE
Adipose	C4a	intron excision ratio	chr20_4023371_4023486	0.16	1	0.07	3.2e-08	5.38	7.60e-08	0.26	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2622575_2622726	0.05	1	0.02	5.8e-03	6.28	3.31e-10	0.03	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2622575_2631555	0.05	1	0.02	5.8e-03	6.28	3.31e-10	0.03	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2631404_2662623	0.2	1164	0.03	2.3e-04	5.6	2.18e-08	0.78	FALSE
Adipose	H2-Q7-ps1	intron excision ratio	chr20_2675633_2675825	0.27	1164	0.06	3.3e-07	-5.77	7.92e-09	0.77	FALSE
Adipose	RT1-A1	intron excision ratio	chr20_4850015_4908004	0.56	452	0.26	6.5e-29	-6.24	4.49e-10	0	FALSE
Adipose	RT1-A1	intron excision ratio	chr20_4873436_4873618	0.98	37	0.4	4.3e-47	-6.29	3.15e-10	0	FALSE
Adipose	RT1-A1	intron excision ratio	chr20_4873436_4908004	0.25	92	0.13	1.3e-14	-5.25	1.53e-07	0.14	TRUE
Adipose	RT1-A1	intron excision ratio	chr20_4875580_4875778	0.63	6600	0.11	3.3e-12	-5.51	3.56e-08	0.14	FALSE
Adipose	RT1-A2	intron excision ratio	chr20_4850015_4908004	0.56	453	0.26	6.9e-29	-6.3	2.90e-10	0	FALSE
Adipose	RT1-A2	intron excision ratio	chr20_4873436_4873618	0.98	43	0.4	3.2e-47	-6.34	2.28e-10	0	FALSE
Adipose	RT1-A2	intron excision ratio	chr20_4875580_4875778	0.63	6558	0.11	3.5e-12	-5.48	4.20e-08	0.14	FALSE
Adipose	RT1-A3	intron excision ratio	chr20_4850015_4908004	0.57	477	0.26	7.8e-29	-6.4	1.59e-10	0	FALSE
Adipose	RT1-A3	intron excision ratio	chr20_4873436_4873618	0.98	43	0.4	4.3e-47	-6.35	2.09e-10	0	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3262317_3262450	0.68	3056	0.5	8.0e-64	-5.49	4.00e-08	0.61	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3262317_3281038	0.14	3056	0.07	2.0e-08	5.44	5.26e-08	0.61	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3280797_3344425	0.38	3056	0.11	2.7e-12	6.36	1.96e-10	0.61	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3302480_3302707	0.59	3056	0.34	2.7e-38	5.52	3.30e-08	0.61	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3319544_3319947	0.5	3056	0.32	1.0e-36	5.23	1.70e-07	0.61	FALSE
Adipose	RT1-CE10	intron excision ratio	chr20_3344457_3382412	0.51	3056	0.07	2.6e-08	5.54	2.96e-08	0.6	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3262317_3262450	0.68	3055	0.5	8.0e-64	-5.49	4.00e-08	0.61	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3262317_3281038	0.14	3055	0.07	2.0e-08	5.44	5.27e-08	0.61	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3280797_3344425	0.38	3055	0.11	2.7e-12	6.36	1.96e-10	0.61	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3302480_3302707	0.59	3055	0.34	2.7e-38	5.52	3.31e-08	0.61	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3319544_3319947	0.5	3055	0.32	1.0e-36	5.23	1.71e-07	0.61	FALSE
Adipose	RT1-CE11	intron excision ratio	chr20_3344457_3382412	0.51	3055	0.07	2.6e-08	5.54	2.94e-08	0.6	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3262317_3262450	0.68	2959	0.5	8.3e-64	-5.52	3.35e-08	0.6	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3262317_3281038	0.14	2959	0.07	1.9e-08	5.48	4.21e-08	0.6	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3280797_3281038	0.31	2959	0.1	2.1e-11	5.21	1.88e-07	0.6	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3280797_3344425	0.38	2959	0.11	2.6e-12	6.41	1.42e-10	0.6	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3302480_3302707	0.57	2959	0.34	2.5e-38	5.57	2.61e-08	0.6	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3319544_3319947	0.5	2959	0.32	1.0e-36	5.27	1.36e-07	0.6	FALSE
Adipose	RT1-CE12	intron excision ratio	chr20_3344457_3382412	0.51	2959	0.07	2.5e-08	5.59	2.21e-08	0.59	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3262317_3262450	0.67	2740	0.5	9.8e-64	-5.62	1.86e-08	0.6	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3262317_3281038	0.13	2740	0.07	1.8e-08	5.54	2.99e-08	0.6	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3264662_3283210	0.31	2	0.01	3.7e-02	6.64	3.05e-11	0.18	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3280797_3281038	0.31	2740	0.1	2.1e-11	5.28	1.32e-07	0.6	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3280797_3344425	0.4	2740	0.11	2.3e-12	6.44	1.17e-10	0.6	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3302480_3302707	0.55	2740	0.34	2.6e-38	5.62	1.95e-08	0.6	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3319544_3319947	0.49	2740	0.32	1.3e-36	5.39	7.03e-08	0.6	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3321999_3322186	0.16	2740	0	1.2e-01	6.78	1.20e-11	0.39	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3322455_3322658	0.24	13	0.06	1.3e-07	5.84	5.27e-09	0.59	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3262317_3262450	0.68	2648	0.5	9.0e-64	-5.69	1.26e-08	0.64	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3262317_3281038	0.14	2648	0.07	1.9e-08	5.59	2.27e-08	0.64	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3280797_3281038	0.32	2648	0.1	2.2e-11	5.33	9.92e-08	0.64	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3280797_3344425	0.4	2648	0.11	2.4e-12	6.53	6.54e-11	0.63	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3302480_3302707	0.55	2648	0.34	2.4e-38	5.69	1.30e-08	0.64	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3319544_3319947	0.5	2648	0.32	1.2e-36	5.45	5.00e-08	0.64	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3322455_3322658	0.25	13	0.06	1.4e-07	5.86	4.72e-09	0.63	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3361215_3362182	0.84	218	0.16	4.6e-17	5.62	1.90e-08	0.58	FALSE
Adipose	RT1-CE14	intron excision ratio	chr20_3382009_3382202	0.25	2648	0.13	2.5e-14	5.24	1.61e-07	0.64	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3262317_3262450	0.68	2609	0.5	8.5e-64	-5.74	9.27e-09	0.66	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3262317_3281038	0.14	2609	0.07	1.9e-08	5.64	1.73e-08	0.65	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3264662_3283210	0.33	9	0.01	4.0e-02	6.78	1.21e-11	0.18	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3269511_3273854	0.14	1	0.01	1.4e-02	-5.66	1.48e-08	0.03	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3280797_3281038	0.33	2609	0.1	2.2e-11	5.38	7.53e-08	0.66	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3280797_3344425	0.41	2609	0.11	2.3e-12	6.59	4.31e-11	0.65	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3302480_3302707	0.55	2609	0.34	2.4e-38	5.74	9.33e-09	0.66	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3319544_3319947	0.5	2609	0.32	1.3e-36	5.5	3.81e-08	0.66	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3321999_3322186	0.16	2609	0	1.4e-01	6.94	3.82e-12	0.42	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3361215_3362182	0.84	170	0.16	5.3e-17	5.54	3.09e-08	0.62	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3382009_3382202	0.25	2609	0.13	2.5e-14	5.28	1.28e-07	0.65	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3262317_3281038	0.14	2619	0.07	1.9e-08	5.63	1.80e-08	0.65	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3264662_3283210	0.35	7	0.01	4.0e-02	6.78	1.20e-11	0.18	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3280797_3281038	0.34	2619	0.1	2.2e-11	5.38	7.64e-08	0.66	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3280797_3344425	0.42	2619	0.11	2.2e-12	6.61	3.87e-11	0.65	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3302480_3302707	0.54	2619	0.34	2.6e-38	5.77	7.92e-09	0.66	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3319544_3319947	0.51	2619	0.32	1.1e-36	5.49	4.05e-08	0.66	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.16	2619	0	1.4e-01	6.95	3.70e-12	0.42	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3322455_3322658	0.26	11	0.06	1.2e-07	5.84	5.09e-09	0.65	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3345172_3362182	0.88	24	0.03	2.7e-04	5.21	1.85e-07	0.1	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3361215_3362182	0.85	181	0.16	1.2e-17	5.57	2.52e-08	0.62	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3382009_3382202	0.26	2619	0.13	2.5e-14	5.28	1.30e-07	0.65	FALSE
Adipose	RT1-CE5	intron excision ratio	chr20_3480408_3480539	0.28	1	0.04	3.7e-05	-5.35	8.73e-08	0.02	FALSE
Adipose	RT1-CE7	intron excision ratio	chr20_3480408_3480539	0.28	1	0.04	3.7e-05	-5.35	8.73e-08	0.02	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2622575_2622726	0.05	1	0.02	5.8e-03	6.28	3.31e-10	0.03	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2622575_2631555	0.05	1	0.02	5.8e-03	6.28	3.31e-10	0.03	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2631404_2662623	0.2	1156	0.03	2.3e-04	5.58	2.35e-08	0.78	FALSE
Adipose	RT1-O1l1	intron excision ratio	chr20_2675633_2675825	0.27	1156	0.06	3.4e-07	-5.76	8.31e-09	0.77	FALSE
Adipose	RT1-S2	intron excision ratio	chr20_2622575_2622726	0.05	1	0.02	5.8e-03	6.36	2.06e-10	0.03	FALSE
Adipose	RT1-S2	intron excision ratio	chr20_2622575_2631555	0.05	1	0.02	5.8e-03	6.59	4.32e-11	0.04	FALSE
Adipose	RT1-S2	intron excision ratio	chr20_2631404_2662623	0.2	1208	0.03	2.2e-04	5.61	2.06e-08	0.78	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2602984_2677147	0.31	39	0.14	8.6e-15	-7.18	6.99e-13	0.65	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2675633_2675825	0.25	1303	0.06	4.3e-07	-5.75	8.79e-09	0.72	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2676612_2677147	0.33	41	0.16	6.7e-18	6.71	1.89e-11	0.61	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2698887_2729421	0.45	13	0.03	3.9e-04	-6.24	4.25e-10	0.12	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2698887_2750401	0.48	15	0.03	1.4e-04	-5.74	9.35e-09	0.02	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2699130_2699317	0.1	6	-0	4.8e-01	6.17	6.84e-10	0.08	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2699130_2730008	0.24	1390	0.02	2.3e-03	7.03	2.06e-12	0.26	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2729315_2729421	0.41	7	0.06	1.9e-07	7.19	6.47e-13	0.42	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2729559_2730008	0.18	1390	0.01	2.4e-02	-6.82	9.11e-12	0.13	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2696283_2746348	0.57	15	0	3.1e-01	-5.25	1.53e-07	0.09	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2696490_2696699	0.59	1357	0.15	1.4e-16	-5.75	8.76e-09	0.71	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2696746_2696880	0.5	1357	0.05	3.3e-06	-6.66	2.68e-11	0.04	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2746614_2746750	0.72	1	0.07	1.9e-08	-6.34	2.28e-10	0.38	FALSE
Adipose	Taf11	intron excision ratio	chr20_5958143_5958781	0.13	1	0	9.6e-02	-6.94	3.85e-12	0.03	FALSE
Adipose	Vps52	intron excision ratio	chr20_4927408_4927714	0.2	1	0.03	5.5e-04	5.4	6.80e-08	0.03	FALSE
Adipose	Abcf1	mRNA stability	Abcf1	0.08	1500	0.05	7.2e-06	5.89	3.96e-09	0	FALSE
Adipose	Ilrun	mRNA stability	Ilrun	0.14	1	0.2	1.1e-21	5.57	2.61e-08	0	FALSE
Adipose	LOC120098978	mRNA stability	LOC120098978	0.4	6070	0.22	1.3e-23	5.34	9.32e-08	0	FALSE
Adipose	Rps10	mRNA stability	Rps10	0.06	44	0.02	6.6e-03	5.89	3.85e-09	0.04	FALSE
Adipose	RT1-Ba	mRNA stability	RT1-Ba	0.72	499	0.67	4.7e-100	5.8	6.75e-09	0.01	FALSE
Adipose	RT1-T24-3	mRNA stability	RT1-T24-3	0.5	2	0.1	1.6e-11	6.25	4.09e-10	0	FALSE
Adipose	Taf11	mRNA stability	Taf11	0.03	1	0.03	1.9e-04	-5.33	9.92e-08	0.03	FALSE
Adipose	Tubb5	mRNA stability	Tubb5	0.12	1	0.1	1.3e-11	-5.63	1.84e-08	0.01	FALSE
Adipose	Zfp523	mRNA stability	Zfp523	0.04	2112	0.05	7.4e-06	-5.21	1.90e-07	0	FALSE
BLA	RT1-CE10	alternative polyA	XM_063279417.1	0.18	3056	0.11	1.6e-06	-5.34	9.20e-08	0	TRUE
BLA	RT1-CE11	alternative polyA	NM_001008834.2	0.64	3055	0.39	6.7e-22	6.33	2.42e-10	0.02	FALSE
BLA	RT1-CE11	alternative polyA	XM_063279411.1	0.61	3055	0.36	2.8e-20	-5.83	5.54e-09	0.01	FALSE
BLA	RT1-CE12	alternative polyA	XM_063279094.1	0.21	14	0.11	2.3e-06	-6.17	6.71e-10	0.01	FALSE
BLA	RT1-CE12	alternative polyA	XM_063279095.1	0.23	12	0.11	1.2e-06	-6.17	6.65e-10	0.01	FALSE
BLA	RT1-CE13	alternative polyA	XM_063279405.1	0.16	1	0.07	1.2e-04	-5.5	3.78e-08	0.03	FALSE
BLA	RT1-CE13	alternative polyA	XM_063279407.1	0.22	1	0.13	1.3e-07	5.5	3.78e-08	0.01	FALSE
BLA	RT1-CE2	alternative polyA	NM_001008840.2	0.09	3086	0.03	6.3e-03	-5.65	1.58e-08	0.54	FALSE
BLA	RT1-T24-3	alternative polyA	XM_063279401.1	0.35	1390	0.18	7.7e-10	-5.42	5.85e-08	0	FALSE
BLA	RT1-T24-4	alternative polyA	XM_063279390.1	0.09	1338	-0	4.0e-01	-7.08	1.45e-12	0.23	FALSE
BLA	RT1-T24-4	alternative polyA	XM_063279395.1	0.09	1338	0	3.1e-01	7.11	1.20e-12	0.28	FALSE
BLA	LOC120098828	alternative TSS	XR_010060952.1	0.4	21	0.29	1.5e-15	6.13	8.98e-10	0.61	FALSE
BLA	LOC120098828	alternative TSS	XR_010060953.1	0.39	23	0.28	3.0e-15	-6.03	1.68e-09	0.44	FALSE
BLA	Ppt2	alternative TSS	XM_006256020.5	0.05	1	0.03	1.0e-02	-5.83	5.50e-09	0.04	FALSE
BLA	RT1-CE10	alternative TSS	NM_001008833.2	0.1	1	0.03	1.5e-02	-5.63	1.83e-08	0.04	FALSE
BLA	RT1-T18	alternative TSS	XM_063279365.1	0.86	11	0.12	5.8e-07	6.24	4.27e-10	0.01	FALSE
BLA	Ddx39b	gene expression	Ddx39b	0.33	3208	0.27	1.1e-14	-6.18	6.44e-10	0	FALSE
BLA	Fkbpl	gene expression	Fkbpl	0.56	6341	0.46	5.4e-27	6.26	3.83e-10	0.68	FALSE
BLA	Flot1	gene expression	Flot1	0.4	1513	0.22	7.8e-12	6.65	2.98e-11	0	FALSE
BLA	Gnl1	gene expression	Gnl1	0.19	1498	0.11	1.5e-06	5.79	7.08e-09	0	FALSE
BLA	Ilrun	gene expression	Ilrun	0.95	223	0.55	1.0e-34	-5.51	3.63e-08	0.91	FALSE
BLA	LOC102549726	gene expression	LOC102549726	0.42	3935	0.31	1.2e-16	-5.89	3.85e-09	0.71	FALSE
BLA	LOC108349039	gene expression	LOC108349039	0.64	46	0.67	1.8e-47	5.39	7.13e-08	0	FALSE
BLA	LOC120098827	gene expression	LOC120098827	0.37	1	0.24	3.4e-13	6.6	4.22e-11	0.78	FALSE
BLA	LOC120098833	gene expression	LOC120098833	0.64	23	0.49	4.9e-29	5.51	3.52e-08	0.01	FALSE
BLA	LOC120098859	gene expression	LOC120098859	0.16	310	0.15	1.6e-08	6.51	7.48e-11	0	FALSE
BLA	LOC120098979	gene expression	LOC120098979	0.19	20	0.08	4.1e-05	-5.47	4.56e-08	0.37	FALSE
BLA	LOC134483853	gene expression	LOC134483853	0.57	145	0.48	2.8e-28	-5.62	1.94e-08	0	FALSE
BLA	Lsm2	gene expression	Lsm2	0.17	1	0.07	1.1e-04	5.46	4.76e-08	0.12	FALSE
BLA	Ly6g6e	gene expression	Ly6g6e	0.16	1	0.13	1.4e-07	-5.48	4.18e-08	0.41	FALSE
BLA	Mog	gene expression	Mog	0.32	14	0.19	2.0e-10	-5.98	2.23e-09	0.58	FALSE
BLA	Pacsin1	gene expression	Pacsin1	0.78	14	0.42	3.2e-24	7.46	8.38e-14	0.01	FALSE
BLA	Prr3	gene expression	Prr3	0.16	9	0.05	8.1e-04	-6.57	5.01e-11	0.23	FALSE
BLA	Rps10	gene expression	Rps10	0.75	2410	0.57	9.5e-36	6.39	1.66e-10	0	FALSE
BLA	RT1-CE15	gene expression	RT1-CE15	0.65	22	0.35	2.8e-19	-5.47	4.53e-08	0	FALSE
BLA	RT1-CE16	gene expression	RT1-CE16	0.81	285	0.6	2.1e-39	5.81	6.19e-09	0	FALSE
BLA	RT1-CE5	gene expression	RT1-CE5	0.29	151	0.15	1.9e-08	-5.76	8.58e-09	0.02	FALSE
BLA	RT1-CE7	gene expression	RT1-CE7	0.35	1	0.14	7.0e-08	-5.61	1.99e-08	0.02	FALSE
BLA	RT1-N3	gene expression	RT1-N3	0.56	51	0.37	9.9e-21	-7.13	9.82e-13	0.73	FALSE
BLA	Skic2	gene expression	Skic2	0.3	4376	0.16	1.1e-08	6.03	1.61e-09	0.26	FALSE
BLA	Srpk1	gene expression	Srpk1	0.11	1	0.09	3.0e-05	5.31	1.09e-07	0.03	FALSE
BLA	Tnxa-ps1	gene expression	Tnxa-ps1	0.22	1	0.19	2.4e-10	-5.46	4.76e-08	0.34	FALSE
BLA	LOC120098828	isoform ratio	XR_010060954.1	0.55	3	0.37	1.3e-20	5.61	2.05e-08	0	FALSE
BLA	RT1-CE10	isoform ratio	NM_001008833.2	0.64	27	0.33	7.8e-18	5.86	4.77e-09	0.01	FALSE
BLA	RT1-CE13	isoform ratio	XM_063279407.1	0.15	1	0.08	6.9e-05	5.5	3.78e-08	0.03	FALSE
BLA	RT1-CE15	isoform ratio	NM_001008838.2	0.22	2609	0.07	1.1e-04	-6.64	3.05e-11	0.39	FALSE
BLA	RT1-T24-4	isoform ratio	NM_001008826.3	0.2	3	0.14	1.2e-07	-6.54	6.18e-11	0.68	FALSE
BLA	RT1-T24-4	isoform ratio	XM_063279395.1	0.6	1357	0.22	1.0e-11	7.18	6.84e-13	0.38	FALSE
BLA	Srpk1	isoform ratio	NM_001025726.1	0.12	1	0.08	4.9e-05	5.58	2.35e-08	0.03	FALSE
BLA	Srpk1	isoform ratio	XM_039098821.2	0.12	1	0.08	3.8e-05	-5.54	3.08e-08	0.03	FALSE
BLA	Taf11	isoform ratio	NM_001008350.1	0.37	74	0.38	4.0e-21	-5.27	1.35e-07	0	FALSE
BLA	Atp6v1g2	intron excision ratio	chr20_3588267_3589585	0.2	171	0.02	1.9e-02	6.74	1.61e-11	0.32	FALSE
BLA	Ddx39b	intron excision ratio	chr20_3588267_3589585	0.2	136	0.02	2.0e-02	6.82	9.17e-12	0.31	FALSE
BLA	LOC134483846	intron excision ratio	chr20_2671263_2712862	0.38	34	0.23	1.4e-12	-6.61	3.84e-11	0.69	FALSE
BLA	LOC134483846	intron excision ratio	chr20_2671263_2735001	0.38	18	0.24	5.9e-13	-6.61	3.96e-11	0.69	FALSE
BLA	RT1-CE10	intron excision ratio	chr20_3262497_3262706	0.68	16	0.38	2.5e-21	-5.43	5.71e-08	0.11	FALSE
BLA	RT1-CE10	intron excision ratio	chr20_3382009_3382202	0.31	3056	0.14	1.1e-07	6.63	3.34e-11	0.01	FALSE
BLA	RT1-CE11	intron excision ratio	chr20_3262497_3262706	0.68	21	0.38	2.5e-21	-5.33	9.58e-08	0.11	FALSE
BLA	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.73	35	0.37	2.4e-20	-6.47	9.61e-11	0.01	FALSE
BLA	RT1-CE11	intron excision ratio	chr20_3382009_3382202	0.31	3055	0.14	1.1e-07	6.63	3.32e-11	0.01	FALSE
BLA	RT1-CE12	intron excision ratio	chr20_3263417_3264387	0.8	54	0.36	3.6e-20	-6.59	4.30e-11	0.01	FALSE
BLA	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.82	34	0.36	3.9e-20	-6.62	3.53e-11	0.01	FALSE
BLA	RT1-CE13	intron excision ratio	chr20_3264662_3264833	0.66	304	0.31	1.0e-16	5.58	2.38e-08	0	FALSE
BLA	RT1-CE13	intron excision ratio	chr20_3264662_3322186	0.52	288	0.29	6.4e-16	-6.06	1.33e-09	0	FALSE
BLA	RT1-CE13	intron excision ratio	chr20_3321999_3322186	0.67	31	0.25	2.3e-13	5.76	8.21e-09	0	FALSE
BLA	RT1-CE13	intron excision ratio	chr20_3345172_3362182	0.59	2740	0.15	2.0e-08	5.29	1.22e-07	0	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3262317_3262450	0.69	2648	0.21	3.2e-11	-5.26	1.44e-07	0.07	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3262497_3262706	0.71	19	0.38	3.4e-21	-5.36	8.32e-08	0.16	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3263417_3264387	0.81	31	0.36	2.8e-20	-6.63	3.30e-11	0.01	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3345172_3362182	0.59	2648	0.15	2.1e-08	5.31	1.07e-07	0	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3382009_3382202	0.29	2648	0.14	9.1e-08	6.71	1.97e-11	0.01	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3262317_3262450	0.72	2609	0.21	2.5e-11	-5.21	1.86e-07	0.08	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3262497_3262706	0.72	14	0.38	3.4e-21	-5.38	7.50e-08	0.2	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3263417_3264387	0.82	26	0.36	3.0e-20	-6.63	3.39e-11	0.01	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3264662_3264833	0.66	2609	0.31	1.0e-16	-6.32	2.69e-10	0	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3264662_3322186	0.52	258	0.29	1.8e-15	-6.28	3.41e-10	0	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3321999_3322186	0.71	21	0.25	2.2e-13	5.79	7.14e-09	0	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3345172_3362182	0.61	2609	0.15	2.3e-08	5.38	7.60e-08	0	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3382009_3382202	0.29	2609	0.14	9.5e-08	6.72	1.79e-11	0.01	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3262317_3262450	0.73	2619	0.21	1.9e-11	-5.26	1.47e-07	0.08	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3262497_3262706	0.73	13	0.38	3.2e-21	-5.34	9.52e-08	0.2	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3263417_3264387	0.82	22	0.36	3.1e-20	-6.64	3.17e-11	0.01	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3264662_3264833	0.67	2619	0.31	1.0e-16	-6.32	2.61e-10	0	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3264662_3322186	0.53	230	0.29	1.3e-15	-6.35	2.15e-10	0	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.73	28	0.25	2.2e-13	5.8	6.67e-09	0	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3345172_3362182	0.64	2619	0.15	2.4e-08	5.38	7.36e-08	0	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3382009_3382202	0.28	2619	0.14	9.5e-08	6.71	1.88e-11	0.01	FALSE
BLA	RT1-CE2	intron excision ratio	chr20_3481171_3506884	0.22	107	0.09	2.1e-05	-5.98	2.17e-09	0.06	FALSE
BLA	RT1-CE2	intron excision ratio	chr20_3544136_3544231	0.32	1	0.14	1.1e-07	5.57	2.53e-08	0.02	FALSE
BLA	RT1-CE3	intron excision ratio	chr20_3481171_3506884	0.21	107	0.09	1.8e-05	-6.03	1.67e-09	0.06	FALSE
BLA	RT1-CE3	intron excision ratio	chr20_3544136_3544231	0.32	1	0.14	1.1e-07	5.58	2.45e-08	0.02	FALSE
BLA	RT1-CE4	intron excision ratio	chr20_3481171_3506884	0.21	107	0.09	1.8e-05	-6.05	1.45e-09	0.06	FALSE
BLA	RT1-CE5	intron excision ratio	chr20_3481171_3506884	0.21	107	0.09	2.3e-05	-6.06	1.34e-09	0.06	FALSE
BLA	RT1-CE5	intron excision ratio	chr20_3544136_3544231	0.32	1	0.14	1.1e-07	5.58	2.42e-08	0.02	FALSE
BLA	RT1-T24-3	intron excision ratio	chr20_2728734_2729040	0.11	1390	0.03	1.3e-02	6.13	8.88e-10	0.05	FALSE
BLA	RT1-T24-4	intron excision ratio	chr20_2696746_2696880	0.43	1357	0.21	3.2e-11	-5.93	3.00e-09	0	FALSE
BLA	RT1-T24-4	intron excision ratio	chr20_2728734_2729040	0.11	1357	0.03	1.3e-02	6.13	8.94e-10	0.05	FALSE
BLA	Sapcd1	intron excision ratio	chr20_3799122_3799601	0.3	3670	0.12	6.6e-07	5.26	1.48e-07	0.09	FALSE
BLA	Syngap1	intron excision ratio	chr20_5035618_5039363	0.21	134	0.03	1.7e-02	-5.57	2.50e-08	0.1	FALSE
BLA	Taf11	intron excision ratio	chr20_5958143_5959340	0.64	184	0.46	5.5e-27	5.77	7.75e-09	0	FALSE
BLA	Bak1	mRNA stability	Bak1	0.13	53	0.03	1.7e-02	6.44	1.16e-10	0.31	FALSE
BLA	Ddx39b	mRNA stability	Ddx39b	0.28	3208	0.1	1.0e-05	5.61	2.04e-08	0.01	FALSE
BLA	LOC108349039	mRNA stability	LOC108349039	0.44	39	0.49	4.8e-29	5.85	4.81e-09	0	FALSE
BLA	LOC120098828	mRNA stability	LOC120098828	0.41	200	0.21	2.0e-11	6.34	2.34e-10	0.05	FALSE
BLA	Rps10	mRNA stability	Rps10	0.38	1	0.27	2.3e-14	6.15	7.92e-10	0	FALSE
BLA	Smim29	mRNA stability	Smim29	0.19	1	0.26	7.9e-14	-5.4	6.71e-08	0	FALSE
Brain	Ly6g6e	alternative polyA	NM_001001972.1	0.04	1	0.01	1.5e-02	-5.42	5.87e-08	0.06	FALSE
Brain	Ly6g6e	alternative polyA	XM_039098955.2	0.04	1	0.01	1.6e-02	5.42	5.87e-08	0.06	FALSE
Brain	RT1-CE10	alternative polyA	NM_001008833.2	0.31	55	0.3	1.1e-28	5.24	1.57e-07	0	FALSE
Brain	RT1-CE10	alternative polyA	XM_063279417.1	0.26	14	0.21	1.7e-19	-6.2	5.56e-10	0.01	FALSE
Brain	RT1-CE11	alternative polyA	NM_001008834.2	0.57	31	0.43	4.7e-43	-6.45	1.09e-10	0.01	FALSE
Brain	RT1-CE11	alternative polyA	XM_063279411.1	0.45	3055	0.3	6.6e-28	-6.7	2.06e-11	0.6	FALSE
Brain	RT1-CE11	alternative polyA	XM_063279413.1	0.24	3055	0.16	4.1e-15	6.84	7.99e-12	0.01	FALSE
Brain	RT1-CE11	alternative polyA	XM_063279416.1	0.22	3055	0.15	3.6e-14	-6.87	6.55e-12	0.01	FALSE
Brain	RT1-CE13	alternative polyA	XM_063279405.1	0.28	2740	0.12	3.1e-11	5.86	4.69e-09	0.01	FALSE
Brain	RT1-CE15	alternative polyA	NM_001008838.2	0.03	1	0.02	4.4e-03	-5.63	1.77e-08	0.03	FALSE
Brain	RT1-CE15	alternative polyA	XM_063279404.1	0.04	1	0.02	4.5e-03	5.57	2.59e-08	0.03	FALSE
Brain	RT1-CE16	alternative polyA	XM_063279421.1	0.79	34	0.51	1.5e-54	5.87	4.30e-09	0	TRUE
Brain	RT1-CE16	alternative polyA	XM_063279423.1	0.79	81	0.51	2.3e-54	5.22	1.82e-07	0	FALSE
Brain	RT1-CE3	alternative polyA	NM_001008841.2	0.11	63	0.05	3.4e-05	-6.07	1.26e-09	0.09	FALSE
Brain	RT1-M6-2	alternative polyA	XM_017601696.2	0.14	170	0.09	1.5e-08	-5.62	1.91e-08	0.2	FALSE
Brain	RT1-T24-3	alternative polyA	XM_063279401.1	0.81	13	0.36	1.9e-34	-5.26	1.42e-07	0	FALSE
Brain	RT1-T24-3	alternative polyA	XM_063279401.1	0.62	13	0.4	6.4e-40	-5.92	3.24e-09	0	FALSE
Brain	Taf11	alternative polyA	XM_063279121.1	0.1	1	0.11	2.3e-10	5.36	8.44e-08	0	FALSE
Brain	Zfp57	alternative polyA	NM_213565.4	0.08	3517	0.04	2.1e-04	-5.8	6.51e-09	0.5	FALSE
Brain	Zfp57	alternative polyA	XM_063279194.1	0.08	3517	0.04	2.3e-04	5.81	6.19e-09	0.51	FALSE
Brain	LOC120098828	alternative TSS	XR_010060952.1	0.16	2611	0.1	1.6e-09	6.59	4.37e-11	0.09	FALSE
Brain	LOC120098828	alternative TSS	XR_010060953.1	0.16	2611	0.1	9.0e-10	-6.64	3.07e-11	0.11	FALSE
Brain	Ppt2	alternative TSS	XM_006256020.5	0.05	1	0.05	1.9e-05	-5.83	5.46e-09	0.36	FALSE
Brain	Ppt2	alternative TSS	XM_006256020.5	0.05	1	0.05	2.5e-05	-5.83	5.46e-09	0.28	FALSE
Brain	RT1-CE10	alternative TSS	NM_001008833.2	0.17	1	0.15	1.2e-13	-5.62	1.95e-08	0.02	FALSE
Brain	RT1-CE11	alternative TSS	XM_063279412.1	0.21	1	0.16	1.8e-14	-5.48	4.26e-08	0.01	FALSE
Brain	RT1-CE16	alternative TSS	XM_063279422.1	0.1	2619	0.08	4.0e-08	-6.34	2.27e-10	0	FALSE
Brain	RT1-T24-4	alternative TSS	XM_063279394.1	0.1	21	0.06	1.3e-06	-6.17	6.71e-10	0.34	FALSE
Brain	Atp6v1g2	gene expression	Atp6v1g2	0.15	3206	0.11	1.6e-10	-5.55	2.83e-08	0.02	FALSE
Brain	Ddx39b	gene expression	Ddx39b	0.66	48	0.68	5.7e-86	-5.81	6.17e-09	0	FALSE
Brain	Def6	gene expression	Def6	0.04	36	0.01	1.5e-02	7.19	6.35e-13	0.35	FALSE
Brain	Fkbpl	gene expression	Fkbpl	0.52	17	0.43	7.6e-44	5.95	2.70e-09	0.43	FALSE
Brain	Gnl1	gene expression	Gnl1	0.61	22	0.19	3.6e-17	7.18	6.94e-13	0.71	FALSE
Brain	Ilrun	gene expression	Ilrun	0.91	22	0.71	4.1e-92	7.84	4.35e-15	0.9	FALSE
Brain	LOC102549726	gene expression	LOC102549726	0.49	38	0.36	1.3e-34	-5.71	1.12e-08	0.69	FALSE
Brain	LOC120098827	gene expression	LOC120098827	0.09	2288	0.04	5.5e-05	-6.59	4.53e-11	0.73	FALSE
Brain	LOC120098832	gene expression	LOC120098832	0.26	4	0.19	1.3e-17	-5.31	1.08e-07	0.01	FALSE
Brain	LOC120098833	gene expression	LOC120098833	0.58	21	0.58	8.5e-66	5.79	7.01e-09	0	FALSE
Brain	LOC120098859	gene expression	LOC120098859	0.29	1	0.21	4.1e-19	5.3	1.15e-07	0	FALSE
Brain	LOC120098968	gene expression	LOC120098968	0.2	14	0.15	9.7e-14	6.65	2.90e-11	0.68	FALSE
Brain	LOC134483848	gene expression	LOC134483848	0.26	12	0.24	8.4e-22	-6.67	2.53e-11	0.7	FALSE
Brain	LOC134483853	gene expression	LOC134483853	0.56	171	0.59	3.3e-68	-5.62	1.90e-08	0	FALSE
Brain	LOC134483855	gene expression	LOC134483855	0.06	3112	0.05	9.4e-06	6.03	1.68e-09	0.05	FALSE
Brain	Ly6g6e	gene expression	Ly6g6e	0.23	60	0.17	2.4e-15	-6.46	1.05e-10	0.7	FALSE
Brain	Mog	gene expression	Mog	0.47	114	0.34	1.7e-32	6.51	7.69e-11	0.57	FALSE
Brain	Nudt3	gene expression	Nudt3	0.24	31	0.2	3.5e-18	-6.99	2.74e-12	0.01	FALSE
Brain	Pacsin1	gene expression	Pacsin1	0.42	13	0.17	2.8e-15	7.51	6.10e-14	0.92	FALSE
Brain	Ppard	gene expression	Ppard	0.07	1	0.06	4.5e-06	5.36	8.44e-08	0.02	FALSE
Brain	Rps10	gene expression	Rps10	0.58	157	0.51	4.7e-55	-6.75	1.51e-11	0	FALSE
Brain	RT1-Ba	gene expression	RT1-Ba	0.28	7013	0.19	3.8e-17	-5.22	1.76e-07	0	FALSE
Brain	RT1-CE11	gene expression	RT1-CE11	0.12	3055	0.07	3.1e-07	-5.89	3.96e-09	0.11	FALSE
Brain	RT1-CE15	gene expression	RT1-CE15	0.5	43	0.4	3.2e-40	-5.86	4.50e-09	0.02	FALSE
Brain	RT1-CE16	gene expression	RT1-CE16	0.88	211	0.77	2.5e-110	5.22	1.75e-07	0	FALSE
Brain	RT1-CE7	gene expression	RT1-CE7	0.22	3166	0.14	4.2e-13	6.29	3.21e-10	0.21	FALSE
Brain	RT1-N3	gene expression	RT1-N3	0.4	1250	0.33	4.3e-32	-6.7	2.13e-11	0.76	FALSE
Brain	RT1-T24-2	gene expression	RT1-T24-2	0.07	43	0.05	1.1e-05	6.65	2.98e-11	0.45	FALSE
Brain	RT1-T24-4	gene expression	RT1-T24-4	0.11	1357	0.08	3.3e-08	5.35	8.90e-08	0	FALSE
Brain	Skic2	gene expression	Skic2	0.29	14	0.17	2.6e-15	6.27	3.69e-10	0.26	FALSE
Brain	Syngap1	gene expression	Syngap1	0.09	21	0.04	2.0e-04	5.25	1.51e-07	0.06	FALSE
Brain	Tap2	gene expression	Tap2	0.21	6989	0.2	1.8e-18	5.56	2.65e-08	0	FALSE
Brain	Tcp11	gene expression	Tcp11	0.07	2249	0.06	2.3e-06	6.94	3.82e-12	0	FALSE
Brain	Tnxa-ps1	gene expression	Tnxa-ps1	0.15	1	0.08	3.7e-08	-5.64	1.74e-08	0.58	FALSE
Brain	Trim10	gene expression	Trim10	0.04	1	0.04	2.9e-04	6.25	4.07e-10	0.04	FALSE
Brain	Vwa7	gene expression	Vwa7	0.34	252	0.28	1.6e-26	-5.22	1.77e-07	0	FALSE
Brain	Zfp57	gene expression	Zfp57	0.05	3517	0.02	1.0e-02	-6.39	1.68e-10	0.53	FALSE
Brain	Znrd1as1	gene expression	Znrd1as1	0.35	1	0.28	9.7e-26	5.82	5.95e-09	0.06	FALSE
Brain	Atat1	isoform ratio	XM_063279206.1	0.03	1531	0.02	8.2e-03	-6.21	5.34e-10	0.03	FALSE
Brain	Atp6v1g2	isoform ratio	NM_212490.2	0.06	3206	0.02	3.0e-03	-6.18	6.25e-10	0.41	FALSE
Brain	Atp6v1g2	isoform ratio	XM_039098921.2	0.06	3206	0.02	5.9e-03	6.11	1.02e-09	0.33	FALSE
Brain	Bag6	isoform ratio	XM_006256090.1	0.15	3239	0.09	6.5e-09	-5.23	1.69e-07	0.31	FALSE
Brain	Bltp3a	isoform ratio	XR_005497711.2	0.03	2417	0.03	1.9e-03	6.54	6.05e-11	0.04	FALSE
Brain	C20h6orf136	isoform ratio	NM_213610.3	0.03	1527	0.02	5.9e-03	5.79	7.13e-09	0.03	FALSE
Brain	Flot1	isoform ratio	NM_022701.2	0.04	1513	0.01	1.6e-02	6.95	3.72e-12	0.44	FALSE
Brain	Grm4	isoform ratio	NM_022666.2	0.03	1	0	1.3e-01	-5.46	4.67e-08	0.03	FALSE
Brain	Grm4	isoform ratio	XM_063278955.1	0.03	1	0.01	9.7e-02	5.3	1.15e-07	0.03	FALSE
Brain	LOC120098828	isoform ratio	XR_010060954.1	0.34	2611	0.25	5.6e-23	5.22	1.83e-07	0.03	FALSE
Brain	LOC120098832	isoform ratio	XR_010060950.1	0.48	3003	0.33	2.2e-31	5.26	1.42e-07	0	FALSE
Brain	Ppt2	isoform ratio	XM_006256020.5	0.05	6613	0.04	1.4e-04	5.55	2.86e-08	0.59	FALSE
Brain	Rpp21	isoform ratio	NM_001002831.1	0.05	3	0.03	8.1e-04	-6.5	7.83e-11	0.34	FALSE
Brain	RT1-CE10	isoform ratio	NM_001008833.2	0.51	46	0.42	6.0e-42	-6.13	8.57e-10	0.01	FALSE
Brain	RT1-CE11	isoform ratio	XM_063279411.1	0.17	3055	0.1	2.5e-09	-5.68	1.37e-08	0.16	FALSE
Brain	RT1-CE15	isoform ratio	NM_001008838.2	0.49	22	0.35	2.2e-33	-5.83	5.38e-09	0.01	FALSE
Brain	RT1-CE16	isoform ratio	NM_001008839.2	0.13	2619	0.11	2.0e-10	-6.29	3.20e-10	0	FALSE
Brain	RT1-CE4	isoform ratio	XR_010060744.1	0.04	3147	0.01	1.4e-02	5.38	7.40e-08	0.18	FALSE
Brain	RT1-N3	isoform ratio	NM_001008855.2	0.1	1250	0.08	1.0e-07	7.18	6.83e-13	0.53	FALSE
Brain	RT1-T24-4	isoform ratio	NM_001008826.3	0.27	1357	0.2	2.6e-18	-5.6	2.13e-08	0.72	FALSE
Brain	RT1-T24-4	isoform ratio	XM_063279395.1	0.37	1357	0.35	8.7e-34	7.05	1.78e-12	0.01	FALSE
Brain	Rxrb	isoform ratio	NM_206849.3	0.04	1	0.03	4.3e-04	5.83	5.50e-09	0.06	FALSE
Brain	Tsbp1	isoform ratio	XM_063279451.1	0.1	6939	0.1	2.7e-09	-5.35	8.56e-08	0.12	FALSE
Brain	Atp6v1g2	intron excision ratio	chr20_3588267_3589585	0.17	3206	0.02	1.0e-02	-5.59	2.25e-08	0.28	FALSE
Brain	Bag6	intron excision ratio	chr20_3689007_3689462	0.21	16	0.13	3.8e-12	5.37	8.04e-08	0.18	FALSE
Brain	Ddr1	intron excision ratio	chr20_3064366_3065290	0.04	1	0.01	2.4e-02	5.6	2.14e-08	0.03	FALSE
Brain	Ddx39b	intron excision ratio	chr20_3588267_3589585	0.17	3208	0.02	9.8e-03	-5.6	2.10e-08	0.28	FALSE
Brain	LOC120098828	intron excision ratio	chr20_3323415_3324829	0.19	2611	0.13	6.1e-12	5.42	5.87e-08	0.08	FALSE
Brain	LOC120098828	intron excision ratio	chr20_3323415_3324850	0.22	2611	0.15	1.4e-13	5.97	2.34e-09	0.06	FALSE
Brain	LOC120098829	intron excision ratio	chr20_3284423_3285075	0.37	2740	0.34	1.6e-32	-6.06	1.37e-09	0.03	FALSE
Brain	LOC120098829	intron excision ratio	chr20_3289131_3325122	0.06	1	0.03	1.9e-03	-5.53	3.18e-08	0.03	FALSE
Brain	LOC120098829	intron excision ratio	chr20_3323415_3324829	0.17	2740	0.13	4.7e-12	5.36	8.43e-08	0.05	FALSE
Brain	LOC120098829	intron excision ratio	chr20_3323415_3324850	0.19	2740	0.15	9.5e-14	5.88	4.10e-09	0.03	FALSE
Brain	LOC120098829	intron excision ratio	chr20_3324940_3325122	0.1	1	0.05	2.3e-05	-5.46	4.76e-08	0.03	FALSE
Brain	LOC120098829	intron excision ratio	chr20_3324940_3325469	0.06	2740	0.02	8.4e-03	5.93	3.11e-09	0.28	FALSE
Brain	LOC120098833	intron excision ratio	chr20_3442516_3484747	0.07	3166	0.01	1.4e-02	-5.85	5.04e-09	0.52	FALSE
Brain	LOC120098833	intron excision ratio	chr20_3509845_3510376	0.08	1	0	1.1e-01	-5.35	8.73e-08	0.05	FALSE
Brain	LOC134483846	intron excision ratio	chr20_2671263_2712862	0.43	1390	0.34	4.2e-32	-6.74	1.55e-11	0.74	FALSE
Brain	LOC134483846	intron excision ratio	chr20_2671263_2735001	0.43	1390	0.34	2.9e-32	-6.74	1.53e-11	0.73	FALSE
Brain	LOC134483853	intron excision ratio	chr20_3442516_3484747	0.07	3165	0.01	1.4e-02	-5.82	5.96e-09	0.52	FALSE
Brain	LOC134483853	intron excision ratio	chr20_3509845_3510376	0.08	1	0	1.3e-01	-5.35	8.73e-08	0.05	FALSE
Brain	RT1-A1	intron excision ratio	chr20_4850015_4908004	0.38	6600	0.1	7.8e-10	5.8	6.53e-09	0.24	FALSE
Brain	RT1-A2	intron excision ratio	chr20_4850015_4908004	0.38	6558	0.1	7.6e-10	5.8	6.64e-09	0.24	FALSE
Brain	RT1-A3	intron excision ratio	chr20_4850015_4908004	0.38	6588	0.1	7.6e-10	5.8	6.48e-09	0.23	FALSE
Brain	RT1-CE10	intron excision ratio	chr20_3262317_3262450	0.5	123	0.46	1.1e-47	5.71	1.11e-08	0.07	FALSE
Brain	RT1-CE10	intron excision ratio	chr20_3262497_3262706	0.74	29	0.39	6.5e-39	6.25	4.02e-10	0.05	FALSE
Brain	RT1-CE10	intron excision ratio	chr20_3302299_3302433	0.32	3056	0.27	3.3e-25	6.02	1.75e-09	0.09	FALSE
Brain	RT1-CE10	intron excision ratio	chr20_3382009_3382202	0.23	3056	0.14	6.5e-13	6.51	7.32e-11	0.09	FALSE
Brain	RT1-CE10	intron excision ratio	chr20_3384703_3384907	0.23	3056	0.15	4.9e-14	-5.96	2.45e-09	0.04	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3262317_3262450	0.5	123	0.46	1.1e-47	5.71	1.11e-08	0.07	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3262497_3262706	0.74	29	0.39	6.5e-39	6.25	4.02e-10	0.05	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.85	3055	0.33	9.3e-32	-6.42	1.39e-10	0.01	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3281387_3303197	0.09	12	0.07	3.2e-07	-5.65	1.64e-08	0.22	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3302299_3302433	0.32	3055	0.27	3.3e-25	6.02	1.76e-09	0.09	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3382009_3382202	0.23	3055	0.14	6.5e-13	6.51	7.34e-11	0.09	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3384703_3384907	0.23	3055	0.15	4.9e-14	-5.96	2.45e-09	0.04	FALSE
Brain	RT1-CE12	intron excision ratio	chr20_3263417_3264387	0.85	2959	0.33	6.8e-32	-6.44	1.18e-10	0.01	FALSE
Brain	RT1-CE12	intron excision ratio	chr20_3384703_3384907	0.22	2959	0.15	4.9e-14	-5.98	2.22e-09	0.03	FALSE
Brain	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.84	2740	0.34	3.1e-32	-6.43	1.30e-10	0.01	FALSE
Brain	RT1-CE13	intron excision ratio	chr20_3264662_3264833	0.75	2740	0.24	9.7e-22	-5.72	1.05e-08	0	FALSE
Brain	RT1-CE13	intron excision ratio	chr20_3264662_3322186	0.62	21	0.2	1.6e-18	-5.63	1.76e-08	0	FALSE
Brain	RT1-CE13	intron excision ratio	chr20_3321999_3322186	0.64	22	0.24	3.4e-22	-5.7	1.16e-08	0.01	FALSE
Brain	RT1-CE14	intron excision ratio	chr20_3262317_3262450	0.52	123	0.46	1.2e-47	5.54	2.98e-08	0.1	FALSE
Brain	RT1-CE14	intron excision ratio	chr20_3262497_3262706	0.7	51	0.4	4.0e-39	6.29	3.21e-10	0.07	FALSE
Brain	RT1-CE14	intron excision ratio	chr20_3281387_3303197	0.09	46	0.07	6.8e-07	-5.89	3.76e-09	0.28	FALSE
Brain	RT1-CE14	intron excision ratio	chr20_3302299_3302433	0.33	2648	0.27	2.9e-25	6.11	1.03e-09	0.13	FALSE
Brain	RT1-CE14	intron excision ratio	chr20_3382009_3382202	0.23	2648	0.14	7.4e-13	6.65	2.97e-11	0.13	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3262317_3262450	0.53	123	0.46	1.3e-47	5.54	2.96e-08	0.13	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3262497_3262706	0.71	51	0.4	4.0e-39	6.29	3.08e-10	0.09	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3263417_3264387	0.83	2609	0.34	1.9e-32	-6.47	9.90e-11	0.02	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3264662_3264833	0.74	2609	0.24	7.4e-22	-5.72	1.05e-08	0	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3264662_3322186	0.64	21	0.2	1.6e-18	-5.65	1.58e-08	0	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3281387_3303197	0.1	34	0.07	5.9e-07	-5.87	4.29e-09	0.31	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3302299_3302433	0.35	2609	0.27	3.3e-25	6.16	7.44e-10	0.16	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3321999_3322186	0.65	21	0.24	3.7e-22	-6.1	1.03e-09	0.01	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3382009_3382202	0.24	2609	0.14	8.1e-13	6.7	2.02e-11	0.16	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3262317_3262450	0.54	123	0.46	1.3e-47	5.54	2.99e-08	0.13	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3262497_3262706	0.72	51	0.39	4.5e-39	6.29	3.21e-10	0.1	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3263417_3264387	0.83	2619	0.34	2.3e-32	-6.48	9.33e-11	0.02	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3264662_3264833	0.73	2619	0.24	7.3e-22	-5.71	1.12e-08	0	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3264662_3322186	0.65	2619	0.2	1.4e-18	5.62	1.92e-08	0	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3302299_3302433	0.35	2619	0.27	3.5e-25	6.16	7.31e-10	0.16	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.67	23	0.24	2.7e-22	-6.14	8.21e-10	0.01	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3382009_3382202	0.24	2619	0.14	8.1e-13	6.72	1.86e-11	0.16	FALSE
Brain	RT1-CE3	intron excision ratio	chr20_3544136_3544231	0.37	51	0.3	6.3e-28	5.25	1.53e-07	0.01	FALSE
Brain	RT1-CE4	intron excision ratio	chr20_3544136_3544231	0.37	51	0.3	6.3e-28	5.26	1.45e-07	0.01	FALSE
Brain	RT1-CE5	intron excision ratio	chr20_3483787_3483991	0.04	1	0.02	1.0e-02	-5.58	2.42e-08	0.03	FALSE
Brain	RT1-CE5	intron excision ratio	chr20_3544136_3544231	0.37	51	0.3	6.2e-28	5.26	1.43e-07	0.01	FALSE
Brain	RT1-S3	intron excision ratio	chr20_2602984_2677147	0.12	6	0.05	1.4e-05	6.82	9.39e-12	0.68	FALSE
Brain	RT1-S3	intron excision ratio	chr20_2676612_2677147	0.05	4	0.03	8.0e-04	6.62	3.60e-11	0.33	FALSE
Brain	RT1-T24-3	intron excision ratio	chr20_2698887_2729421	0.62	9	0.16	5.8e-15	-6.1	1.09e-09	0	FALSE
Brain	RT1-T24-3	intron excision ratio	chr20_2699130_2730008	0.06	1390	0.02	1.1e-02	6.82	8.83e-12	0.15	FALSE
Brain	RT1-T24-3	intron excision ratio	chr20_2728734_2729040	0.09	43	0.04	2.8e-04	-6.7	2.13e-11	0.25	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2696283_2696461	0.14	18	0.07	6.1e-07	6.59	4.41e-11	0.63	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2696490_2696699	0.24	1357	0.07	3.7e-07	6.53	6.52e-11	0	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2728734_2729040	0.09	43	0.04	2.8e-04	-6.7	2.13e-11	0.25	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2746170_2746348	0.14	1357	0.07	4.7e-07	-7	2.62e-12	0.7	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2746380_2746567	0.06	1357	0.03	1.9e-03	-6.13	8.75e-10	0.69	FALSE
Brain	Sapcd1	intron excision ratio	chr20_3799122_3799601	0.23	3670	0.2	1.8e-18	5.73	1.02e-08	0.38	FALSE
Brain	Taf11	intron excision ratio	chr20_5958143_5958781	0.14	28	0.07	4.4e-07	-5.36	8.21e-08	0	FALSE
Brain	Taf11	intron excision ratio	chr20_5958143_5959340	0.65	23	0.39	9.3e-39	-7.82	5.11e-15	0	FALSE
Brain	Taf11	intron excision ratio	chr20_5958877_5959340	0.26	184	0.16	2.1e-14	-6.85	7.50e-12	0	FALSE
Brain	Znrd1as1	intron excision ratio	chr20_1595233_1599935	0.05	17	0.04	1.3e-04	-5.82	5.95e-09	0.56	FALSE
Brain	Clic1	mRNA stability	Clic1	0.06	3563	0.03	1.1e-03	6.3	2.96e-10	0.63	FALSE
Brain	Fkbpl	mRNA stability	Fkbpl	0.14	6341	0.07	9.3e-07	5.44	5.45e-08	0.19	FALSE
Brain	Gnl1	mRNA stability	Gnl1	0.05	1498	0.04	2.7e-04	-7.05	1.73e-12	0.32	FALSE
Brain	LOC108349039	mRNA stability	LOC108349039	0.38	35	0.42	9.4e-43	5.34	9.16e-08	0	FALSE
Brain	Ly6g6d	mRNA stability	Ly6g6d	0.09	3597	0.06	1.1e-06	-5.54	3.09e-08	0.29	FALSE
Brain	Mdc1	mRNA stability	Mdc1	0.34	1516	0.13	4.2e-12	-5.33	9.76e-08	0	FALSE
Brain	Nudt3	mRNA stability	Nudt3	0.09	4	0.08	3.4e-08	-6.18	6.51e-10	0.01	FALSE
Brain	Rnf5	mRNA stability	Rnf5	0.23	1	0.18	1.5e-16	5.83	5.46e-09	0.63	FALSE
Brain	Rps10	mRNA stability	Rps10	0.18	6	0.18	3.7e-16	-5.97	2.40e-09	0	FALSE
Brain	RT1-T24-3	mRNA stability	RT1-T24-3	0.2	1390	0.1	3.0e-09	6.9	5.10e-12	0.71	FALSE
Brain	Taf11	mRNA stability	Taf11	0.41	1	0.34	3.9e-33	-5.25	1.54e-07	0	FALSE
Brain	Znrd1as1	mRNA stability	Znrd1as1	0.22	1	0.17	4.6e-16	6.25	4.00e-10	0.47	FALSE
Eye	RT1-T24-4	alternative polyA	XM_063279390.1	0.62	1357	0.14	4.1e-03	-6.39	1.61e-10	0.1	FALSE
Eye	RT1-T24-4	alternative polyA	XM_063279395.1	0.58	1357	0.13	5.9e-03	6.31	2.85e-10	0.1	FALSE
Eye	Taf11	alternative polyA	XM_063279121.1	0.41	1	0.05	5.8e-02	-6.33	2.43e-10	0.06	FALSE
Eye	RT1-CE10	alternative TSS	NM_001008833.2	0.4	1	0.05	6.0e-02	-5.5	3.79e-08	0.05	FALSE
Eye	RT1-CE16	alternative TSS	NM_001008839.2	0.67	1	0.14	4.3e-03	5.63	1.84e-08	0.05	FALSE
Eye	RT1-CE16	alternative TSS	XM_063279421.1	0.5	1	0.12	7.6e-03	-5.63	1.84e-08	0.05	FALSE
Eye	RT1-CE16	alternative TSS	XM_063279421.1	0.52	18	0.12	7.0e-03	6.05	1.47e-09	0.25	FALSE
Eye	RT1-CE16	alternative TSS	XM_063279422.1	0.45	20	0.12	6.7e-03	-6.14	8.08e-10	0.2	FALSE
Eye	Ilrun	gene expression	Ilrun	0.88	2400	0.32	8.6e-06	6.19	6.05e-10	0.73	FALSE
Eye	LOC120098828	gene expression	LOC120098828	0.59	4	0.19	8.4e-04	-5.88	4.16e-09	0.19	FALSE
Eye	LOC120098971	gene expression	LOC120098971	0.7	44	0.17	1.6e-03	8.37	5.90e-17	0.27	FALSE
Eye	Rps10	gene expression	Rps10	0.78	17	0.08	2.2e-02	6.87	6.64e-12	0.29	FALSE
Eye	RT1-CE11	gene expression	RT1-CE11	0.7	23	0.26	5.9e-05	-5.77	7.73e-09	0.35	FALSE
Eye	RT1-CE14	gene expression	RT1-CE14	0.58	19	0.23	1.8e-04	-5.57	2.52e-08	0.35	FALSE
Eye	RT1-CE15	gene expression	RT1-CE15	0.59	6	0.24	1.5e-04	-5.52	3.30e-08	0.24	FALSE
Eye	RT1-CE16	gene expression	RT1-CE16	0.86	165	0.39	4.1e-07	5.98	2.27e-09	0.2	FALSE
Eye	Sapcd1	gene expression	Sapcd1	0.56	3670	0.11	8.9e-03	6.22	5.03e-10	0.19	FALSE
Eye	Spdef	gene expression	Spdef	0.45	12	0.11	8.1e-03	-6.81	9.47e-12	0.2	FALSE
Eye	Tap1	gene expression	Tap1	0.51	1	0.09	1.8e-02	5.83	5.50e-09	0.05	FALSE
Eye	Vwa7	gene expression	Vwa7	0.62	14	0.22	3.1e-04	-5.66	1.54e-08	0.27	FALSE
Eye	Zbtb9	gene expression	Zbtb9	0.51	1	0.06	5.1e-02	5.86	4.75e-09	0.05	FALSE
Eye	Znrd1as1	gene expression	Znrd1as1	0.61	1	0.14	3.8e-03	5.82	5.95e-09	0.05	FALSE
Eye	RT1-CE15	isoform ratio	NM_001008838.2	0.58	29	0.24	1.5e-04	6.06	1.40e-09	0.2	FALSE
Eye	RT1-CE15	isoform ratio	XR_010060747.1	0.54	27	0.13	4.8e-03	6.54	6.14e-11	0.11	FALSE
Eye	Taf11	isoform ratio	NM_001008350.1	0.42	1	0.16	2.2e-03	-5.27	1.36e-07	0.06	FALSE
Eye	Hmga1	intron excision ratio	chr20_5613598_5613843	0.49	1	-0.02	6.8e-01	-5.3	1.15e-07	0.05	FALSE
Eye	RT1-CE10	intron excision ratio	chr20_3280797_3281038	0.45	1	0.06	3.9e-02	5.5	3.79e-08	0.05	FALSE
Eye	RT1-CE11	intron excision ratio	chr20_3280797_3281038	0.45	1	0.06	3.9e-02	5.5	3.79e-08	0.05	FALSE
Eye	RT1-CE11	intron excision ratio	chr20_3281387_3281515	0.55	10	0.19	8.3e-04	-5.71	1.15e-08	0.17	FALSE
Eye	RT1-CE11	intron excision ratio	chr20_3281387_3360940	0.73	1	0.1	1.2e-02	-5.66	1.48e-08	0.05	FALSE
Eye	RT1-CE14	intron excision ratio	chr20_3280797_3281038	0.43	1	0.06	3.9e-02	5.5	3.79e-08	0.05	FALSE
Eye	RT1-CE14	intron excision ratio	chr20_3281387_3281515	0.54	10	0.18	8.6e-04	-5.71	1.14e-08	0.18	FALSE
Eye	RT1-CE14	intron excision ratio	chr20_3281387_3360940	0.76	1	0.1	1.2e-02	-5.66	1.48e-08	0.05	FALSE
Eye	RT1-CE15	intron excision ratio	chr20_3280797_3281038	0.44	1	0.06	3.9e-02	5.5	3.79e-08	0.05	FALSE
Eye	RT1-CE15	intron excision ratio	chr20_3281387_3281515	0.55	10	0.18	8.8e-04	-5.71	1.15e-08	0.19	FALSE
Eye	RT1-CE15	intron excision ratio	chr20_3281387_3360940	0.77	1	0.1	1.2e-02	-5.66	1.48e-08	0.05	FALSE
Eye	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.7	2619	0.11	1.0e-02	5.26	1.43e-07	0.08	FALSE
Eye	Anks1a	mRNA stability	Anks1a	0.33	1	0.03	1.1e-01	-5.33	9.66e-08	0.06	FALSE
Eye	Ddx39b	mRNA stability	Ddx39b	0.69	9	0.32	8.6e-06	5.73	9.91e-09	0.24	FALSE
Eye	Ilrun	mRNA stability	Ilrun	0.59	2400	0.09	1.7e-02	8.12	4.62e-16	0.53	FALSE
Eye	RT1-CE16	mRNA stability	RT1-CE16	0.73	113	0.24	1.4e-04	5.98	2.27e-09	0.05	FALSE
IC	RT1-CE10	alternative polyA	NM_001008833.2	0.19	3056	0.1	3.8e-05	6.01	1.89e-09	0	FALSE
IC	RT1-CE11	alternative polyA	NM_001008834.2	0.61	13	0.45	1.2e-20	6.72	1.84e-11	0.01	FALSE
IC	RT1-CE11	alternative polyA	XM_063279411.1	0.25	3055	0.06	2.5e-03	-6.21	5.16e-10	0.13	FALSE
IC	RT1-CE11	alternative polyA	XM_063279413.1	0.11	45	0.06	1.8e-03	-5.35	8.89e-08	0.01	FALSE
IC	RT1-T24-3	alternative polyA	XM_063279401.1	0.25	1390	0.16	4.1e-07	-6.59	4.34e-11	0.01	FALSE
IC	RT1-T24-3	alternative polyA	XM_063279401.1	0.3	1390	0.17	9.9e-08	-6.76	1.35e-11	0	FALSE
IC	Taf11	alternative polyA	XM_039098682.2	0.42	2415	0.3	4.2e-13	-5.61	2.07e-08	0	FALSE
IC	Taf11	alternative polyA	XM_063279121.1	0.42	2415	0.3	2.9e-13	5.65	1.63e-08	0	FALSE
IC	Anks1a	alternative TSS	NM_001414943.1	0.1	1	0.06	1.0e-03	-5.25	1.54e-07	0.04	FALSE
IC	LOC108349039	alternative TSS	XR_010061005.1	0.14	1	0.08	3.4e-04	-5.39	7.17e-08	0.04	FALSE
IC	LOC120098828	alternative TSS	XR_010060952.1	0.3	11	0.2	5.3e-09	5.6	2.19e-08	0	FALSE
IC	LOC120098828	alternative TSS	XR_010060953.1	0.29	8	0.17	1.3e-07	-5.56	2.76e-08	0	FALSE
IC	RT1-CE10	alternative TSS	NM_001008833.2	0.1	6	0.07	5.0e-04	6.5	7.88e-11	0.1	FALSE
IC	Trim26	alternative TSS	XM_063279086.1	0.07	66	0.03	1.4e-02	5.82	5.76e-09	0.3	FALSE
IC	Agpat1	gene expression	Agpat1	0.13	1	0.09	1.7e-04	-5.46	4.76e-08	0.04	FALSE
IC	Ddx39b	gene expression	Ddx39b	0.23	13	0.25	6.0e-11	-6.17	6.89e-10	0.02	FALSE
IC	Fkbpl	gene expression	Fkbpl	0.7	140	0.53	1.4e-25	-6.04	1.58e-09	0.7	FALSE
IC	Flot1	gene expression	Flot1	0.15	16	0.11	3.3e-05	6.31	2.83e-10	0.21	FALSE
IC	Gnl1	gene expression	Gnl1	0.16	1498	0.08	3.9e-04	6.34	2.27e-10	0.65	FALSE
IC	Hspa1a	gene expression	Hspa1a	0.33	1	0.24	2.7e-10	-5.78	7.46e-09	0.87	FALSE
IC	LOC102549726	gene expression	LOC102549726	0.48	27	0.42	5.3e-19	-5.57	2.52e-08	0.7	FALSE
IC	LOC120098827	gene expression	LOC120098827	0.23	1	0.14	2.2e-06	6.53	6.79e-11	0.32	FALSE
IC	LOC120098832	gene expression	LOC120098832	0.19	3003	0.1	3.7e-05	-5.94	2.86e-09	0.01	FALSE
IC	LOC120098833	gene expression	LOC120098833	0.58	23	0.5	1.4e-23	6.31	2.77e-10	0.01	FALSE
IC	LOC120098859	gene expression	LOC120098859	0.31	1	0.25	8.7e-11	5.25	1.54e-07	0	FALSE
IC	LOC120098968	gene expression	LOC120098968	0.17	1	0.1	6.2e-05	6.34	2.28e-10	0.07	FALSE
IC	LOC134483853	gene expression	LOC134483853	0.53	19	0.44	2.2e-20	5.92	3.26e-09	0	FALSE
IC	LOC134483858	gene expression	LOC134483858	0.41	1	0.22	1.6e-09	-5.37	8.04e-08	0.13	FALSE
IC	Mog	gene expression	Mog	0.25	1	0.13	4.2e-06	5.78	7.30e-09	0.04	FALSE
IC	Nudt3	gene expression	Nudt3	0.5	2415	0.29	1.4e-12	-6.46	1.03e-10	0.84	FALSE
IC	Pacsin1	gene expression	Pacsin1	0.18	1	0.12	1.0e-05	-6.89	5.64e-12	0.04	FALSE
IC	Rps10	gene expression	Rps10	0.68	1	0.41	1.2e-18	-5.99	2.08e-09	0	FALSE
IC	RT1-Ba	gene expression	RT1-Ba	0.19	2	0.11	2.4e-05	-5.64	1.73e-08	0.1	FALSE
IC	RT1-CE10	gene expression	RT1-CE10	0.46	20	0.42	7.5e-19	-5.51	3.66e-08	0.01	FALSE
IC	RT1-CE11	gene expression	RT1-CE11	0.38	13	0.31	1.1e-13	-6.72	1.86e-11	0.01	FALSE
IC	RT1-CE12	gene expression	RT1-CE12	0.23	2959	0.17	1.7e-07	6.14	8.00e-10	0.02	FALSE
IC	RT1-CE14	gene expression	RT1-CE14	0.52	2648	0.4	8.8e-18	-6.17	6.66e-10	0	FALSE
IC	RT1-CE15	gene expression	RT1-CE15	0.68	2609	0.46	1.5e-21	-5.43	5.72e-08	0	FALSE
IC	RT1-CE16	gene expression	RT1-CE16	0.84	47	0.62	2.5e-32	6.29	3.26e-10	0	FALSE
IC	RT1-CE5	gene expression	RT1-CE5	0.42	3165	0.23	3.8e-10	5.33	9.95e-08	0.01	FALSE
IC	RT1-N3	gene expression	RT1-N3	0.47	1250	0.36	7.8e-16	-7.1	1.24e-12	0.74	FALSE
IC	Smim29	gene expression	Smim29	0.56	1	0.43	1.3e-19	5.25	1.54e-07	0	FALSE
IC	Tnxa-ps1	gene expression	Tnxa-ps1	0.15	1	0.09	1.0e-04	-5.46	4.76e-08	0.07	FALSE
IC	Egfl8	isoform ratio	NM_001165880.2	0.29	23	0.23	3.7e-10	-5.94	2.90e-09	0.4	FALSE
IC	Ilrun	isoform ratio	NM_001039607.2	0.15	27	0.15	1.1e-06	-5.32	1.05e-07	0	FALSE
IC	Ilrun	isoform ratio	NM_001410292.1	0.15	66	0.17	1.1e-07	-5.29	1.24e-07	0	FALSE
IC	LOC120098829	isoform ratio	XR_010060965.1	0.08	2740	0.03	1.6e-02	6.5	7.96e-11	0.06	FALSE
IC	Ralgdsl2	isoform ratio	XM_063279023.1	0.07	13	0.02	3.2e-02	5.81	6.10e-09	0.08	FALSE
IC	RT1-T24-4	isoform ratio	NM_001008826.3	0.1	20	0.06	2.4e-03	-6.39	1.68e-10	0.55	FALSE
IC	RT1-T24-4	isoform ratio	XM_063279395.1	0.47	62	0.3	3.5e-13	-5.57	2.51e-08	0	FALSE
IC	Apom	intron excision ratio	chr20_3695809_3696076	0.1	1	0.06	1.7e-03	-5.33	9.70e-08	0.04	FALSE
IC	Ilrun	intron excision ratio	chr20_5814339_5827328	0.08	2400	0.02	6.3e-02	-7.31	2.74e-13	0.27	FALSE
IC	LOC120098828	intron excision ratio	chr20_3323415_3324850	0.21	1	0.12	1.3e-05	-5.38	7.58e-08	0.04	FALSE
IC	LOC120098829	intron excision ratio	chr20_3323415_3324850	0.18	1	0.12	1.3e-05	-5.36	8.44e-08	0.04	FALSE
IC	LOC134483846	intron excision ratio	chr20_2671263_2712862	0.24	17	0.11	3.6e-05	-6.5	8.22e-11	0.2	FALSE
IC	LOC134483846	intron excision ratio	chr20_2671263_2735001	0.24	12	0.11	3.3e-05	-6.46	1.03e-10	0.2	FALSE
IC	LOC134483846	intron excision ratio	chr20_2709656_2712862	0.58	1390	0.26	1.8e-11	5.67	1.45e-08	0	FALSE
IC	LOC134483846	intron excision ratio	chr20_2709656_2735001	0.57	1390	0.26	2.5e-11	5.58	2.43e-08	0	FALSE
IC	RT1-CE10	intron excision ratio	chr20_3384252_3384434	0.16	1	0.04	1.0e-02	5.35	8.73e-08	0.04	FALSE
IC	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.76	1	0.43	1.6e-19	5.37	8.00e-08	0	FALSE
IC	RT1-CE11	intron excision ratio	chr20_3281387_3303197	0.23	10	0.12	8.9e-06	6.39	1.65e-10	0.04	FALSE
IC	RT1-CE11	intron excision ratio	chr20_3384252_3384434	0.16	1	0.04	1.0e-02	5.35	8.73e-08	0.04	FALSE
IC	RT1-CE12	intron excision ratio	chr20_3263417_3264387	0.78	1	0.43	1.6e-19	5.37	8.00e-08	0	FALSE
IC	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.8	1	0.43	1.6e-19	5.37	8.00e-08	0	FALSE
IC	RT1-CE13	intron excision ratio	chr20_3321999_3322186	0.49	29	0.22	8.5e-10	5.41	6.34e-08	0	FALSE
IC	RT1-CE14	intron excision ratio	chr20_3281387_3303197	0.25	10	0.13	5.0e-06	6.41	1.50e-10	0.06	FALSE
IC	RT1-CE14	intron excision ratio	chr20_3302299_3302433	0.4	14	0.14	1.3e-06	6.09	1.14e-09	0	FALSE
IC	RT1-CE15	intron excision ratio	chr20_3263417_3264387	0.81	1	0.43	1.6e-19	5.37	8.00e-08	0	FALSE
IC	RT1-CE15	intron excision ratio	chr20_3281387_3303197	0.26	11	0.13	4.7e-06	6.41	1.47e-10	0.07	FALSE
IC	RT1-CE16	intron excision ratio	chr20_3263417_3264387	0.81	1	0.43	1.6e-19	5.37	8.00e-08	0	FALSE
IC	RT1-CE16	intron excision ratio	chr20_3302299_3302433	0.41	14	0.14	1.9e-06	6.17	6.62e-10	0	FALSE
IC	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.54	30	0.22	8.1e-10	5.5	3.89e-08	0	FALSE
IC	RT1-CE1	intron excision ratio	chr20_3481171_3506884	0.16	3092	0.09	1.9e-04	6.48	8.90e-11	0.09	FALSE
IC	RT1-CE1	intron excision ratio	chr20_3544136_3544231	0.19	4	0.05	3.2e-03	-5.42	5.87e-08	0.01	FALSE
IC	RT1-CE2	intron excision ratio	chr20_3481171_3506884	0.16	3086	0.09	1.9e-04	6.48	9.37e-11	0.09	FALSE
IC	RT1-CE2	intron excision ratio	chr20_3544136_3544231	0.19	4	0.05	3.1e-03	-5.42	5.87e-08	0.01	FALSE
IC	RT1-CE3	intron excision ratio	chr20_3481171_3506884	0.16	3129	0.09	1.8e-04	6.46	1.04e-10	0.09	FALSE
IC	RT1-CE3	intron excision ratio	chr20_3544136_3544231	0.18	4	0.05	3.3e-03	-5.42	5.87e-08	0.01	FALSE
IC	RT1-CE4	intron excision ratio	chr20_3481171_3506884	0.16	3147	0.09	1.8e-04	6.46	1.06e-10	0.09	FALSE
IC	RT1-CE4	intron excision ratio	chr20_3544136_3544231	0.18	4	0.05	3.2e-03	-5.42	5.87e-08	0.01	FALSE
IC	RT1-CE5	intron excision ratio	chr20_3422775_3480539	0.15	3165	0.05	4.6e-03	-5.56	2.68e-08	0.02	FALSE
IC	RT1-CE5	intron excision ratio	chr20_3481171_3506884	0.16	3165	0.09	1.8e-04	6.46	1.03e-10	0.09	FALSE
IC	RT1-CE5	intron excision ratio	chr20_3544136_3544231	0.19	4	0.05	3.5e-03	-5.42	5.87e-08	0.01	FALSE
IC	RT1-T24-1	intron excision ratio	chr20_2745341_2745648	0.24	1492	0.09	9.0e-05	5.84	5.22e-09	0	FALSE
IC	RT1-T24-1	intron excision ratio	chr20_2778507_2778818	0.24	1492	0.08	4.4e-04	-6.2	5.77e-10	0.02	FALSE
IC	RT1-T24-3	intron excision ratio	chr20_2723176_2726784	0.12	1390	0.01	7.3e-02	6.83	8.61e-12	0.14	FALSE
IC	RT1-T24-4	intron excision ratio	chr20_2723176_2726784	0.12	1357	0.01	7.3e-02	6.83	8.37e-12	0.14	FALSE
IC	RT1-T24-4	intron excision ratio	chr20_2745341_2745648	0.26	1357	0.1	5.3e-05	5.86	4.57e-09	0	FALSE
IC	RT1-T24-4	intron excision ratio	chr20_2778507_2778818	0.21	1357	0.09	1.7e-04	-6.22	4.98e-10	0.03	FALSE
IC	Sapcd1	intron excision ratio	chr20_3799122_3799601	0.32	3670	0.22	9.2e-10	5.46	4.71e-08	0.38	FALSE
IC	Syngap1	intron excision ratio	chr20_5035618_5039363	0.19	1	0.07	5.4e-04	-5.86	4.56e-09	0.11	FALSE
IC	Ddx39b	mRNA stability	Ddx39b	0.22	1	0.18	4.5e-08	-5.57	2.50e-08	0.03	FALSE
IC	LOC108349039	mRNA stability	LOC108349039	0.21	1	0.22	1.2e-09	-5.25	1.55e-07	0	FALSE
IC	Ppt2	mRNA stability	Ppt2	0.12	1	0.05	5.3e-03	5.92	3.32e-09	0.07	FALSE
IC	Rnf5	mRNA stability	Rnf5	0.31	6916	0.23	5.7e-10	-5.97	2.43e-09	0.46	FALSE
IC	Rps10	mRNA stability	Rps10	0.33	259	0.26	1.9e-11	5.69	1.29e-08	0	FALSE
IC	RT1-CE16	mRNA stability	RT1-CE16	0.24	15	0.17	1.9e-07	-5.62	1.86e-08	0	FALSE
IL	Dhx16	alternative polyA	XM_039098480.2	0.25	1524	0.1	2.0e-03	-5.31	1.11e-07	0.03	FALSE
IL	RT1-CE10	alternative polyA	NM_001008833.2	0.46	3056	0.31	3.6e-08	5.35	8.57e-08	0	FALSE
IL	RT1-CE10	alternative polyA	XM_063279417.1	0.22	19	0.05	2.2e-02	6.23	4.59e-10	0.07	FALSE
IL	RT1-CE11	alternative polyA	NM_001008834.2	0.17	3055	0.07	8.7e-03	6.4	1.53e-10	0.12	FALSE
IL	RT1-CE11	alternative polyA	XM_063279411.1	0.34	3055	0.11	1.7e-03	-6.25	4.23e-10	0.16	FALSE
IL	RT1-CE11	alternative polyA	XM_063279413.1	0.24	1	0.1	2.2e-03	-5.53	3.16e-08	0.05	FALSE
IL	RT1-CE16	alternative polyA	XM_063279421.1	0.36	2619	0.24	1.6e-06	6.08	1.23e-09	0.59	FALSE
IL	RT1-CE16	alternative polyA	XM_063279423.1	0.36	2619	0.25	1.2e-06	-6.11	9.87e-10	0.6	FALSE
IL	RT1-CE5	alternative polyA	XM_063279116.1	0.37	1	0.21	7.8e-06	-5.46	4.76e-08	0.05	FALSE
IL	RT1-T24-3	alternative polyA	XM_063279400.1	0.53	1390	0.26	7.4e-07	5.59	2.33e-08	0	FALSE
IL	LOC108349039	alternative TSS	XR_010061005.1	0.35	1	0.11	1.3e-03	6.88	6.16e-12	0.05	FALSE
IL	LOC120098828	alternative TSS	XR_010060952.1	0.23	2611	0.06	1.8e-02	6.41	1.49e-10	0.34	FALSE
IL	LOC120098828	alternative TSS	XR_010060953.1	0.25	47	0.06	1.7e-02	6.14	8.30e-10	0.3	FALSE
IL	RT1-CE1	alternative TSS	XM_063279104.1	0.27	1	0.06	1.4e-02	-5.47	4.48e-08	0.05	FALSE
IL	Flot1	gene expression	Flot1	0.74	1513	0.33	1.0e-08	5.23	1.71e-07	0	FALSE
IL	LOC108349039	gene expression	LOC108349039	0.46	30	0.36	1.4e-09	5.59	2.28e-08	0	FALSE
IL	LOC108353253	gene expression	LOC108353253	0.33	37	0.17	8.4e-05	-5.42	5.83e-08	0.44	FALSE
IL	LOC120098827	gene expression	LOC120098827	0.31	1	0.12	8.2e-04	5.6	2.12e-08	0.05	FALSE
IL	LOC120098828	gene expression	LOC120098828	0.4	2611	0.27	3.7e-07	-5.82	5.88e-09	0.59	FALSE
IL	LOC120098833	gene expression	LOC120098833	0.52	3166	0.34	7.1e-09	6.21	5.44e-10	0.17	FALSE
IL	LOC134483853	gene expression	LOC134483853	0.29	3165	0.23	2.5e-06	5.33	1.00e-07	0.01	FALSE
IL	Nudt3	gene expression	Nudt3	0.35	32	0.13	6.0e-04	-7.76	8.71e-15	0.11	FALSE
IL	Pacsin1	gene expression	Pacsin1	0.47	1	0.16	9.7e-05	-6.33	2.43e-10	0.05	FALSE
IL	RT1-Ba	gene expression	RT1-Ba	0.24	7013	0.11	1.5e-03	-6.61	3.76e-11	0.29	FALSE
IL	RT1-CE15	gene expression	RT1-CE15	0.75	7	0.39	1.6e-10	-5.21	1.86e-07	0.44	FALSE
IL	RT1-CE5	gene expression	RT1-CE5	0.55	3165	0.38	4.9e-10	5.42	6.06e-08	0	FALSE
IL	RT1-N3	gene expression	RT1-N3	0.86	1250	0.31	2.8e-08	-6.56	5.56e-11	0.71	FALSE
IL	Tcp11	gene expression	Tcp11	0.15	1	0.12	6.8e-04	-5.51	3.55e-08	0.05	FALSE
IL	LOC120098828	isoform ratio	XR_010060954.1	0.38	2611	0.14	3.7e-04	6.26	3.74e-10	0.34	FALSE
IL	Rps10	isoform ratio	NM_031109.2	0.72	36	0.45	3.3e-12	-6.81	1.01e-11	0.18	FALSE
IL	Rps10	isoform ratio	XM_063279576.1	0.74	25	0.46	1.2e-12	6.81	9.97e-12	0.25	FALSE
IL	RT1-CE10	isoform ratio	NM_001008833.2	0.41	3056	0.3	4.9e-08	6.32	2.64e-10	0.01	FALSE
IL	RT1-CE11	isoform ratio	NM_001008834.2	0.38	1	0.13	4.0e-04	-5.53	3.16e-08	0.05	FALSE
IL	RT1-CE11	isoform ratio	XM_063279411.1	0.27	1	0.19	3.3e-05	5.54	3.11e-08	0.05	FALSE
IL	RT1-CE15	isoform ratio	XR_010060747.1	0.24	1	0.13	4.9e-04	-5.53	3.16e-08	0.05	FALSE
IL	RT1-T24-4	isoform ratio	XM_063279395.1	0.25	70	0.13	6.4e-04	-6.31	2.77e-10	0.57	FALSE
IL	Taf11	isoform ratio	NM_001008350.1	0.36	58	0.28	2.5e-07	5.24	1.61e-07	0	FALSE
IL	Taf11	isoform ratio	XM_063279121.1	0.2	1	0.13	5.6e-04	5.39	6.94e-08	0.05	FALSE
IL	RT1-CE11	intron excision ratio	chr20_3320676_3362182	0.38	160	0.2	1.7e-05	6.16	7.43e-10	0.01	FALSE
IL	RT1-CE12	intron excision ratio	chr20_3320676_3362182	0.39	138	0.2	1.7e-05	6.15	7.97e-10	0.01	FALSE
IL	RT1-T24-3	intron excision ratio	chr20_2698887_2750401	0.28	1390	0.09	3.7e-03	6.32	2.59e-10	0.08	FALSE
IL	Ilrun	mRNA stability	Ilrun	0.16	1	0.08	7.1e-03	5.39	6.94e-08	0.05	FALSE
IL	Taf11	mRNA stability	Taf11	0.57	2415	0.38	4.3e-10	7.34	2.17e-13	0	FALSE
LHb	Ddx39b	gene expression	Ddx39b	0.45	3208	0.27	3.4e-07	-5.84	5.34e-09	0	FALSE
LHb	Fkbpl	gene expression	Fkbpl	0.27	6341	0.11	1.6e-03	6.12	9.36e-10	0.34	FALSE
LHb	Flot1	gene expression	Flot1	0.17	1513	0.09	4.3e-03	5.74	9.73e-09	0.05	FALSE
LHb	H2-M10.6l	gene expression	H2-M10.6l	0.32	1612	0.13	6.8e-04	-6.48	9.12e-11	0.05	FALSE
LHb	Hspa1a	gene expression	Hspa1a	0.3	20	0.07	9.9e-03	5.59	2.24e-08	0.11	FALSE
LHb	Ilrun	gene expression	Ilrun	0.79	1	0.27	5.2e-07	-7.88	3.24e-15	0.35	FALSE
LHb	Lhfpl5	gene expression	Lhfpl5	0.29	814	0.15	1.9e-04	5.24	1.61e-07	0.02	FALSE
LHb	LOC102549726	gene expression	LOC102549726	0.42	3935	0.19	2.4e-05	-5.6	2.18e-08	0.27	FALSE
LHb	LOC108349039	gene expression	LOC108349039	0.24	1	0.12	8.6e-04	-5.52	3.47e-08	0.05	FALSE
LHb	LOC120098828	gene expression	LOC120098828	0.47	45	0.34	9.0e-09	5.74	9.41e-09	0.48	FALSE
LHb	LOC120098833	gene expression	LOC120098833	0.41	3166	0.27	4.5e-07	5.47	4.49e-08	0	FALSE
LHb	LOC120098968	gene expression	LOC120098968	0.21	12	0.03	8.3e-02	6.92	4.41e-12	0.23	FALSE
LHb	Mog	gene expression	Mog	0.25	3552	0.06	1.6e-02	-5.32	1.04e-07	0.36	FALSE
LHb	RT1-Ba	gene expression	RT1-Ba	0.37	12	0.22	6.3e-06	-5.87	4.38e-09	0.2	FALSE
LHb	RT1-CE15	gene expression	RT1-CE15	0.78	1	0.3	5.9e-08	5.53	3.16e-08	0.04	FALSE
LHb	RT1-CE5	gene expression	RT1-CE5	0.64	14	0.33	9.9e-09	-5.64	1.70e-08	0	FALSE
LHb	Hsd17b8	isoform ratio	NM_212529.1	0.19	2	0.04	3.8e-02	-5.32	1.03e-07	0.32	FALSE
LHb	Rps10	isoform ratio	NM_031109.2	0.78	141	0.52	1.9e-14	6.36	1.97e-10	0	FALSE
LHb	Rps10	isoform ratio	XM_063279576.1	0.8	142	0.49	2.2e-13	-6.57	5.00e-11	0	FALSE
LHb	RT1-T24-3	isoform ratio	NM_001166403.1	0.68	1390	0.37	9.1e-10	5.94	2.84e-09	0	FALSE
LHb	RT1-T24-4	isoform ratio	XM_063279395.1	0.3	12	0.07	8.7e-03	-5.85	4.93e-09	0.59	FALSE
LHb	Taf11	isoform ratio	NM_001008350.1	0.32	1	0.2	1.4e-05	-5.39	6.94e-08	0.05	FALSE
LHb	Gabbr1	intron excision ratio	chr20_1473677_1474246	0.29	3649	-0.01	5.1e-01	6.51	7.55e-11	0.11	FALSE
LHb	Ralgdsl2	intron excision ratio	chr20_4952978_4954068	0.39	12	0.05	2.6e-02	-5.43	5.50e-08	0.13	FALSE
LHb	RT1-CE14	intron excision ratio	chr20_3262317_3262450	0.41	26	0.11	1.5e-03	5.25	1.49e-07	0.35	FALSE
LHb	RT1-CE15	intron excision ratio	chr20_3262317_3262450	0.42	26	0.12	9.7e-04	5.28	1.30e-07	0.35	FALSE
LHb	RT1-CE2	intron excision ratio	chr20_3544136_3544231	0.37	16	0.04	3.9e-02	-5.61	2.04e-08	0.32	FALSE
LHb	RT1-CE4	intron excision ratio	chr20_3544136_3544231	0.35	16	0.04	3.3e-02	-5.61	1.98e-08	0.32	FALSE
LHb	RT1-CE5	intron excision ratio	chr20_3544136_3544231	0.35	17	0.04	3.6e-02	-5.61	1.97e-08	0.32	FALSE
LHb	RT1-S3	intron excision ratio	chr20_2696746_2696880	0.24	17	0.11	1.4e-03	6.98	2.92e-12	0.1	FALSE
LHb	RT1-T24-4	intron excision ratio	chr20_2696746_2696880	0.24	17	0.11	1.4e-03	6.98	2.89e-12	0.1	FALSE
LHb	Abhd16a	mRNA stability	Abhd16a	0.36	3604	0.05	2.1e-02	-5.46	4.73e-08	0.16	FALSE
LHb	LOC108349039	mRNA stability	LOC108349039	0.21	1	0.22	4.6e-06	-5.52	3.47e-08	0.05	FALSE
Liver	RT1-CE10	alternative polyA	XM_063279417.1	0.46	23	0.28	1.2e-30	-6.55	5.78e-11	0.02	FALSE
Liver	RT1-CE10	alternative polyA	XM_063279418.1	0.3	52	0.17	1.4e-18	-6.44	1.23e-10	0.19	FALSE
Liver	RT1-CE11	alternative polyA	NM_001008834.2	0.54	308	0.38	3.0e-44	-6.36	2.03e-10	0.61	FALSE
Liver	RT1-CE11	alternative polyA	XM_063279411.1	0.49	151	0.27	1.2e-29	6.33	2.48e-10	0.01	FALSE
Liver	RT1-CE13	alternative polyA	XM_063279405.1	0.26	14	0.14	3.7e-15	-6.65	2.93e-11	0.59	FALSE
Liver	RT1-Db1	alternative polyA	NM_001008884.2	0.05	1	0.03	3.9e-04	-5.9	3.74e-09	0.08	FALSE
Liver	RT1-Db1	alternative polyA	XM_063279016.1	0.06	1	0.04	1.4e-05	5.9	3.74e-09	0.35	FALSE
Liver	RT1-T24-3	alternative polyA	XM_063279400.1	0.44	25	0.27	1.9e-30	-6.65	2.88e-11	0	FALSE
Liver	RT1-T24-3	alternative polyA	XM_063279401.1	0.09	19	0.04	3.0e-05	6.23	4.74e-10	0.17	FALSE
Liver	RT1-T24-3	alternative polyA	XM_063279403.1	0.34	43	0.21	1.6e-22	5.86	4.67e-09	0	FALSE
Liver	RT1-T24-3	alternative polyA	XM_063279400.1	0.46	21	0.35	9.1e-41	-6.84	7.71e-12	0	FALSE
Liver	RT1-T24-3	alternative polyA	XM_063279401.1	0.1	1390	0.05	5.9e-06	-6.64	3.14e-11	0	FALSE
Liver	RT1-T24-3	alternative polyA	XM_063279403.1	0.33	16	0.22	2.1e-24	6.08	1.23e-09	0	FALSE
Liver	RT1-T24-4	alternative polyA	XM_063279390.1	0.79	1357	0.19	3.1e-20	-5.49	4.04e-08	0	FALSE
Liver	Bltp3a	alternative TSS	XM_039099274.2	0.08	2417	0.01	1.3e-02	7.33	2.30e-13	0.44	FALSE
Liver	Bltp3a	alternative TSS	XM_039099274.2	0.08	15	0.02	3.0e-03	6.93	4.35e-12	0.08	FALSE
Liver	Flot1	alternative TSS	XM_063279499.1	0.05	1513	0.03	2.1e-04	-5.34	9.45e-08	0	FALSE
Liver	Ppt2	alternative TSS	XM_006256019.4	0.02	1	0.01	3.2e-02	-5.92	3.32e-09	0.05	FALSE
Liver	RT1-CE1	alternative TSS	XM_039098654.2	0.16	3092	0.15	2.4e-16	5.94	2.87e-09	0	FALSE
Liver	Snrpc	alternative TSS	XM_039098816.2	0.52	100	0.33	3.7e-37	8.02	1.04e-15	0.65	FALSE
Liver	Snrpc	alternative TSS	XM_063279219.1	0.2	112	0.19	2.7e-20	-7.23	4.92e-13	0	FALSE
Liver	Cchcr1	gene expression	Cchcr1	0.13	1	0.09	9.2e-10	5.54	3.00e-08	0.01	FALSE
Liver	Ddx39b	gene expression	Ddx39b	0.39	38	0.33	7.9e-38	5.33	9.59e-08	0	FALSE
Liver	Fkbp5	gene expression	Fkbp5	0.12	1	0.06	4.8e-07	5.62	1.96e-08	0.01	TRUE
Liver	Flot1	gene expression	Flot1	0.36	21	0.28	3.7e-31	5.64	1.67e-08	0	FALSE
Liver	Gnl1	gene expression	Gnl1	0.11	6	0.08	2.4e-09	5.26	1.46e-07	0	FALSE
Liver	Hmga1	gene expression	Hmga1	0.11	2656	0.01	1.0e-02	-6.81	1.01e-11	0.53	FALSE
Liver	Ilrun	gene expression	Ilrun	0.81	2400	0.32	5.3e-36	7.35	2.03e-13	0.89	FALSE
Liver	LOC120098961	gene expression	LOC120098961	0.05	1	0.02	2.7e-03	5.3	1.14e-07	0.03	FALSE
Liver	LOC134483842	gene expression	LOC134483842	0.02	1	0.02	1.6e-03	-6.02	1.72e-09	0.03	FALSE
Liver	Nudt3	gene expression	Nudt3	0.17	110	0.05	2.6e-06	6.05	1.41e-09	0.01	FALSE
Liver	Rps10	gene expression	Rps10	0.37	99	0.24	2.8e-26	-6	1.92e-09	0	FALSE
Liver	RT1-CE10	gene expression	RT1-CE10	0.72	41	0.54	7.2e-71	6.32	2.66e-10	0.02	FALSE
Liver	RT1-CE15	gene expression	RT1-CE15	0.75	67	0.52	3.9e-68	-7.22	5.06e-13	0.46	FALSE
Liver	RT1-CE16	gene expression	RT1-CE16	0.88	78	0.69	4.5e-107	-5.73	1.01e-08	0	FALSE
Liver	RT1-Da	gene expression	RT1-Da	0.04	6985	0.03	8.2e-04	5.67	1.42e-08	0.49	FALSE
Liver	Snrpc	gene expression	Snrpc	0.76	133	0.3	1.1e-33	8.21	2.12e-16	0.89	FALSE
Liver	Taf11	gene expression	Taf11	0.06	1	0.01	5.0e-02	7	2.49e-12	0.03	FALSE
Liver	Tcf19	gene expression	Tcf19	0.08	1	0.05	4.9e-06	5.6	2.14e-08	0.01	FALSE
Liver	Tubb5	gene expression	Tubb5	0.07	8	0.04	2.3e-05	-5.3	1.15e-07	0.44	FALSE
Liver	Phf1	isoform ratio	NM_001414742.1	0.66	6145	0.1	1.1e-10	6.14	8.34e-10	0.06	FALSE
Liver	RT1-CE10	isoform ratio	NM_001008833.2	0.25	399	0.18	2.8e-19	-5.48	4.27e-08	0.62	FALSE
Liver	RT1-CE11	isoform ratio	XM_063279412.1	0.38	21	0.26	1.5e-28	-5.56	2.70e-08	0.01	FALSE
Liver	RT1-CE13	isoform ratio	XM_063279405.1	0.33	74	0.25	3.2e-27	-5.58	2.38e-08	0	FALSE
Liver	RT1-CE16	isoform ratio	XM_063279421.1	0.21	29	0.17	3.8e-18	-5.9	3.72e-09	0.65	FALSE
Liver	RT1-N3	isoform ratio	NM_001008855.2	0.08	1250	0.04	4.4e-05	7.06	1.67e-12	0.69	FALSE
Liver	RT1-T24-3	isoform ratio	NM_001166403.1	0.28	1390	0.14	1.1e-15	6.6	4.11e-11	0	FALSE
Liver	RT1-T24-3	isoform ratio	XM_063279401.1	0.36	42	0.39	2.5e-46	6.17	7.02e-10	0	FALSE
Liver	Slc39a7	isoform ratio	NM_001008885.2	0.03	1	0.03	2.0e-04	5.85	4.90e-09	0.04	FALSE
Liver	Snrpc	isoform ratio	NM_001271040.1	0.28	39	0.11	4.1e-12	6.43	1.26e-10	0.89	TRUE
Liver	Snrpc	isoform ratio	XM_039098816.2	0.37	113	0.22	9.3e-24	8.38	5.33e-17	0.89	FALSE
Liver	LOC102553505	intron excision ratio	chr20_2953921_2955331	0.48	1511	0.06	7.5e-07	-6.2	5.62e-10	0.68	FALSE
Liver	LOC102553505	intron excision ratio	chr20_2954360_2955331	0.05	1511	0.02	1.2e-03	-6.19	6.00e-10	0.59	FALSE
Liver	Lsm2	intron excision ratio	chr20_3848861_3851065	0.28	3864	0.12	4.9e-13	-6.21	5.23e-10	0.71	FALSE
Liver	Lsm2	intron excision ratio	chr20_3851132_3851663	0.27	3864	0.11	2.8e-12	6.22	4.98e-10	0.69	FALSE
Liver	Lst1	intron excision ratio	chr20_3642619_3643154	0.06	1	0.01	1.5e-02	5.38	7.60e-08	0.03	FALSE
Liver	Lst1	intron excision ratio	chr20_3642619_3643388	0.06	1	0.01	1.8e-02	-5.38	7.60e-08	0.03	FALSE
Liver	Psmb9	intron excision ratio	chr20_4669110_4670721	0.07	1	0.03	2.8e-04	5.35	8.92e-08	0.03	FALSE
Liver	Psmb9	intron excision ratio	chr20_4670788_4672059	0.08	7042	0.02	1.4e-03	6.13	8.55e-10	0.12	FALSE
Liver	RT1-CE10	intron excision ratio	chr20_3346935_3347139	0.12	1	0.05	6.1e-06	-5.66	1.56e-08	0.02	FALSE
Liver	RT1-CE10	intron excision ratio	chr20_3382919_3383977	0.5	84	0.17	2.8e-18	6.17	6.83e-10	0	FALSE
Liver	RT1-CE10	intron excision ratio	chr20_3384703_3384907	0.23	24	0.12	1.7e-13	-5.89	3.76e-09	0.61	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.64	52	0.28	1.3e-30	5.63	1.81e-08	0.02	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3281387_3281515	0.57	1	0.44	6.3e-54	5.66	1.56e-08	0.02	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3281387_3303197	0.38	58	0.2	2.4e-21	-6.25	4.15e-10	0.59	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3281790_3362182	0.83	67	0.26	2.2e-28	5.39	6.98e-08	0	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3346935_3347139	0.12	1	0.05	6.1e-06	-5.66	1.56e-08	0.02	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3382919_3383977	0.5	84	0.17	2.8e-18	6.17	6.82e-10	0	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3384703_3384907	0.23	22	0.12	1.8e-13	-5.89	3.83e-09	0.61	FALSE
Liver	RT1-CE12	intron excision ratio	chr20_3263417_3264387	0.65	43	0.27	1.8e-30	5.61	2.03e-08	0.01	FALSE
Liver	RT1-CE12	intron excision ratio	chr20_3281790_3362182	0.85	47	0.26	2.2e-28	5.49	4.08e-08	0	FALSE
Liver	RT1-CE12	intron excision ratio	chr20_3345172_3362182	0.8	48	0.24	6.7e-26	5.24	1.58e-07	0	FALSE
Liver	RT1-CE12	intron excision ratio	chr20_3346935_3347139	0.12	1	0.05	6.1e-06	-5.66	1.53e-08	0.02	FALSE
Liver	RT1-CE12	intron excision ratio	chr20_3384703_3384907	0.23	25	0.12	1.8e-13	-5.89	3.80e-09	0.6	FALSE
Liver	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.68	121	0.28	4.7e-31	5.85	4.83e-09	0.02	FALSE
Liver	RT1-CE13	intron excision ratio	chr20_3281790_3362182	0.88	42	0.26	2.9e-28	5.45	4.91e-08	0	FALSE
Liver	RT1-CE13	intron excision ratio	chr20_3321999_3322186	0.5	13	0.14	3.6e-15	-5.4	6.58e-08	0.58	FALSE
Liver	RT1-CE13	intron excision ratio	chr20_3345172_3362182	0.82	30	0.24	5.9e-26	5.23	1.66e-07	0	FALSE
Liver	RT1-CE14	intron excision ratio	chr20_3281387_3281515	0.56	1	0.44	6.3e-54	5.67	1.43e-08	0.02	FALSE
Liver	RT1-CE14	intron excision ratio	chr20_3281387_3303197	0.42	153	0.19	1.7e-20	-6.12	9.56e-10	0.61	FALSE
Liver	RT1-CE14	intron excision ratio	chr20_3281387_3360940	0.55	39	0.45	6.8e-55	5.47	4.56e-08	0.64	FALSE
Liver	RT1-CE14	intron excision ratio	chr20_3321999_3322186	0.5	7	0.14	4.5e-15	5.61	2.03e-08	0.61	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3263417_3264387	0.7	74	0.28	4.9e-31	5.87	4.38e-09	0.03	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3269511_3270989	0.13	1	0.04	1.6e-05	5.54	2.97e-08	0.01	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3269511_3273854	0.3	1	0.19	2.0e-20	-5.54	2.97e-08	0.01	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3281387_3281515	0.57	1	0.44	6.3e-54	5.67	1.46e-08	0.01	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3281387_3303197	0.44	71	0.19	1.7e-20	-5.99	2.05e-09	0.62	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3281387_3360940	0.56	37	0.45	7.0e-55	5.48	4.36e-08	0.66	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3281790_3362182	0.89	39	0.26	3.1e-28	5.44	5.46e-08	0	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3321999_3322186	0.51	7	0.14	4.1e-15	5.63	1.78e-08	0.63	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3345172_3362182	0.84	26	0.24	6.0e-26	5.22	1.80e-07	0	FALSE
Liver	RT1-CE16	intron excision ratio	chr20_3263417_3264387	0.72	80	0.28	7.5e-31	5.9	3.67e-09	0.03	FALSE
Liver	RT1-CE16	intron excision ratio	chr20_3281790_3362182	0.9	69	0.25	4.8e-28	5.41	6.16e-08	0	FALSE
Liver	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.54	7	0.14	4.5e-15	5.6	2.14e-08	0.63	FALSE
Liver	RT1-CE16	intron excision ratio	chr20_3345172_3362182	0.85	27	0.23	1.1e-25	5.21	1.85e-07	0	FALSE
Liver	RT1-CE1	intron excision ratio	chr20_3481171_3481299	0.74	27	0.21	2.4e-22	-5.8	6.81e-09	0.6	FALSE
Liver	RT1-CE1	intron excision ratio	chr20_3481171_3544231	0.52	19	0.15	2.6e-16	-5.61	2.02e-08	0.48	FALSE
Liver	RT1-CE2	intron excision ratio	chr20_3481171_3481299	0.74	27	0.2	2.5e-22	-5.81	6.15e-09	0.6	FALSE
Liver	RT1-CE2	intron excision ratio	chr20_3481171_3544231	0.53	11	0.15	2.7e-16	6.45	1.10e-10	0.48	FALSE
Liver	RT1-CE3	intron excision ratio	chr20_3422775_3422910	0.12	1	0.02	3.9e-03	5.54	3.10e-08	0.03	FALSE
Liver	RT1-CE3	intron excision ratio	chr20_3422775_3480539	0.36	31	0.09	2.6e-10	5.51	3.50e-08	0.58	FALSE
Liver	RT1-CE3	intron excision ratio	chr20_3481171_3481299	0.73	29	0.2	3.0e-22	-5.87	4.47e-09	0.59	FALSE
Liver	RT1-CE3	intron excision ratio	chr20_3481171_3544231	0.53	19	0.15	2.0e-16	-5.61	2.00e-08	0.48	FALSE
Liver	RT1-CE5	intron excision ratio	chr20_3422775_3422910	0.12	1	0.02	3.9e-03	5.54	3.10e-08	0.03	FALSE
Liver	RT1-CE5	intron excision ratio	chr20_3422775_3480539	0.35	22	0.08	2.4e-09	-5.45	4.95e-08	0.58	FALSE
Liver	RT1-CE5	intron excision ratio	chr20_3481171_3481299	0.71	25	0.21	4.2e-23	-5.86	4.51e-09	0.59	FALSE
Liver	RT1-CE5	intron excision ratio	chr20_3481171_3544231	0.54	19	0.15	2.2e-16	-5.63	1.80e-08	0.48	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2602984_2677147	0.65	27	0.19	1.4e-20	-6.42	1.33e-10	0.72	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2676612_2677147	0.67	23	0.19	5.9e-21	6.11	9.77e-10	0.72	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2677422_2677524	0.23	1303	0.09	6.1e-10	-6.15	7.84e-10	0.73	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2677658_2677835	0.61	1303	0.07	4.0e-08	-6.04	1.54e-09	0.73	FALSE
Liver	RT1-T24-3	intron excision ratio	chr20_2698887_2729421	0.34	1390	0.06	1.0e-07	6.07	1.30e-09	0	FALSE
Liver	RT1-T24-3	intron excision ratio	chr20_2699130_2730008	0.45	22	0.1	4.3e-11	6.92	4.60e-12	0.02	FALSE
Liver	RT1-T24-3	intron excision ratio	chr20_2729315_2729421	0.33	1390	0.06	1.8e-07	-6.14	8.28e-10	0	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2677422_2677524	0.22	1357	0.09	6.1e-10	-6.16	7.23e-10	0.71	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2677658_2677835	0.61	1357	0.07	4.3e-08	-6.06	1.40e-09	0.71	FALSE
Liver	Snrpc	intron excision ratio	chr20_5890395_5891581	0.21	112	0.1	1.2e-10	-6.36	2.04e-10	0	FALSE
Liver	Snrpc	intron excision ratio	chr20_5897866_5898164	0.39	137	0.21	2.5e-23	-8.32	8.78e-17	0.89	FALSE
Liver	Snrpc	intron excision ratio	chr20_5897976_5898164	0.52	187	0.36	3.8e-42	8.07	6.80e-16	0.89	FALSE
Liver	Taf11	intron excision ratio	chr20_5958143_5959340	0.47	134	0.31	4.3e-35	6.99	2.70e-12	0	FALSE
Liver	Taf11	intron excision ratio	chr20_5958877_5959340	0.1	31	0.04	3.6e-05	6.43	1.32e-10	0.06	FALSE
Liver	Vars2	intron excision ratio	chr20_3082389_3082524	0.04	1	0.02	1.2e-03	5.46	4.86e-08	0.03	FALSE
Liver	Lst1	mRNA stability	Lst1	0.21	103	0.07	2.1e-08	-5.49	3.98e-08	0.06	FALSE
Liver	RT1-Ba	mRNA stability	RT1-Ba	0.69	560	0.76	5.7e-130	5.5	3.85e-08	0	FALSE
Liver	RT1-CE15	mRNA stability	RT1-CE15	0.55	2609	0.46	5.7e-57	-6.57	4.87e-11	0.66	FALSE
Liver	RT1-DMb	mRNA stability	RT1-DMb	0.06	7021	0.03	6.3e-04	5.71	1.13e-08	0.14	FALSE
Liver	Taf11	mRNA stability	Taf11	0.05	2415	0.05	5.3e-06	5.62	1.93e-08	0	FALSE
NAcc	RT1-CE10	alternative polyA	NM_001008833.2	0.24	12	0.23	6.0e-34	5.59	2.34e-08	0.02	FALSE
NAcc	RT1-CE11	alternative polyA	NM_001008834.2	0.38	32	0.4	3.2e-64	6.11	9.95e-10	0.01	FALSE
NAcc	RT1-CE11	alternative polyA	XM_063279411.1	0.29	67	0.24	2.1e-35	6.57	5.03e-11	0.01	FALSE
NAcc	RT1-CE11	alternative polyA	XM_063279413.1	0.1	7	0.08	1.4e-12	5.63	1.75e-08	0.01	FALSE
NAcc	RT1-CE11	alternative polyA	XM_063279416.1	0.1	8	0.09	1.0e-13	-5.63	1.82e-08	0.01	FALSE
NAcc	RT1-CE12	alternative polyA	XM_063279095.1	0.2	18	0.15	2.6e-22	-5.83	5.61e-09	0.01	FALSE
NAcc	RT1-CE13	alternative polyA	XM_063279405.1	0.1	2740	0.07	1.7e-10	5.21	1.92e-07	0.03	FALSE
NAcc	RT1-CE16	alternative polyA	XM_063279421.1	0.09	2619	0.08	7.7e-12	5.32	1.06e-07	0	FALSE
NAcc	RT1-CE16	alternative polyA	XM_063279423.1	0.09	2619	0.08	3.2e-12	-5.37	7.75e-08	0	FALSE
NAcc	Zfp57	alternative polyA	NM_213565.4	0.05	1	0.02	3.0e-04	5.8	6.50e-09	0.03	FALSE
NAcc	Zfp57	alternative polyA	XM_063279194.1	0.04	79	0.02	1.6e-04	-5.57	2.48e-08	0.51	FALSE
NAcc	LOC120098828	alternative TSS	XR_010060952.1	0.06	8	0.04	2.8e-06	7.29	3.02e-13	0.79	FALSE
NAcc	LOC120098828	alternative TSS	XR_010060953.1	0.06	10	0.03	4.9e-06	-7.3	2.98e-13	0.76	FALSE
NAcc	RT1-CE10	alternative TSS	NM_001008833.2	0.07	8	0.07	7.1e-11	6.15	7.85e-10	0.01	FALSE
NAcc	RT1-CE16	alternative TSS	XM_063279421.1	0.06	65	0.06	4.7e-09	-5.31	1.07e-07	0	FALSE
NAcc	RT1-CE16	alternative TSS	XM_063279422.1	0.07	83	0.06	1.1e-09	5.26	1.42e-07	0	FALSE
NAcc	RT1-CE1	alternative TSS	XM_063279104.1	0.03	3092	0.01	4.8e-03	6.28	3.39e-10	0.03	FALSE
NAcc	Smim29	alternative TSS	XM_063279028.1	0.02	2639	0.01	2.5e-03	-6.11	9.69e-10	0.04	FALSE
NAcc	Taf11	alternative TSS	NM_001008350.1	0.03	1	0.04	2.2e-06	-5.43	5.52e-08	0	FALSE
NAcc	Bltp3a	gene expression	Bltp3a	0.01	1	0.01	6.4e-03	5.58	2.37e-08	0.02	FALSE
NAcc	Ddx39b	gene expression	Ddx39b	0.34	54	0.43	3.2e-71	-5.45	5.01e-08	0	FALSE
NAcc	Egfl8	gene expression	Egfl8	0.06	6865	0.05	2.2e-08	-6.49	8.70e-11	0.22	FALSE
NAcc	Fkbpl	gene expression	Fkbpl	0.37	6	0.42	5.2e-69	6.57	5.06e-11	0.69	FALSE
NAcc	Flot1	gene expression	Flot1	0.05	1513	0.03	4.0e-05	6.31	2.78e-10	0.7	FALSE
NAcc	Gnl1	gene expression	Gnl1	0.04	5	0.02	7.0e-04	7.19	6.67e-13	0.64	FALSE
NAcc	Grm4	gene expression	Grm4	0.16	104	0.05	1.2e-08	6.77	1.28e-11	0.09	FALSE
NAcc	Ilrun	gene expression	Ilrun	0.85	161	0.74	2.0e-170	-6.43	1.28e-10	0.91	FALSE
NAcc	LOC108349039	gene expression	LOC108349039	0.09	1	0.15	1.2e-21	-5.6	2.12e-08	0	FALSE
NAcc	LOC120098827	gene expression	LOC120098827	0.24	33	0.24	1.4e-35	-6.51	7.51e-11	0.73	FALSE
NAcc	LOC120098832	gene expression	LOC120098832	0.08	3003	0.07	4.2e-11	-5.98	2.23e-09	0	FALSE
NAcc	LOC120098833	gene expression	LOC120098833	0.39	27	0.53	1.0e-94	5.66	1.52e-08	0.01	FALSE
NAcc	LOC120098859	gene expression	LOC120098859	0.06	1	0.05	9.0e-08	5.55	2.88e-08	0	FALSE
NAcc	LOC120098968	gene expression	LOC120098968	0.09	1379	0.07	2.6e-10	-6.98	2.97e-12	0.69	FALSE
NAcc	LOC120098979	gene expression	LOC120098979	0.04	1	0.04	3.0e-06	-5.42	5.97e-08	0.45	FALSE
NAcc	LOC134483849	gene expression	LOC134483849	0.02	1482	0.01	4.3e-02	-6.81	9.72e-12	0.15	FALSE
NAcc	LOC134483853	gene expression	LOC134483853	0.46	139	0.52	2.8e-92	-5.26	1.46e-07	0	FALSE
NAcc	LOC134483855	gene expression	LOC134483855	0.04	3112	0.03	7.1e-05	5.71	1.11e-08	0.01	FALSE
NAcc	Lsm2	gene expression	Lsm2	0.09	1	0.09	1.9e-13	5.78	7.46e-09	0.87	FALSE
NAcc	Mog	gene expression	Mog	0.35	32	0.17	1.5e-25	6.17	7.02e-10	0.18	FALSE
NAcc	Nudt3	gene expression	Nudt3	0.19	2408	0.11	9.7e-17	-6.45	1.12e-10	0.8	FALSE
NAcc	Pacsin1	gene expression	Pacsin1	0.09	1	0.06	2.0e-09	-7.15	8.89e-13	0.01	FALSE
NAcc	Rps10	gene expression	Rps10	0.28	1	0.28	2.1e-42	-6.18	6.30e-10	0	FALSE
NAcc	RT1-CE12	gene expression	RT1-CE12	0.49	83	0.42	5.1e-70	-5.33	9.99e-08	0	FALSE
NAcc	RT1-CE15	gene expression	RT1-CE15	0.6	14	0.51	1.2e-89	-6.46	1.05e-10	0	FALSE
NAcc	RT1-CE16	gene expression	RT1-CE16	0.67	213	0.73	2.0e-163	5.44	5.40e-08	0	FALSE
NAcc	RT1-CE5	gene expression	RT1-CE5	0.62	62	0.19	2.4e-27	-5.5	3.71e-08	0.01	FALSE
NAcc	RT1-N3	gene expression	RT1-N3	0.37	67	0.35	1.8e-55	7.09	1.31e-12	0.76	FALSE
NAcc	Smim29	gene expression	Smim29	0.23	1	0.28	4.2e-43	5.25	1.54e-07	0	FALSE
NAcc	Tubb5	gene expression	Tubb5	0.07	1516	0.05	1.3e-07	5.82	6.05e-09	0	FALSE
NAcc	Zfp57	gene expression	Zfp57	0.07	1	0.04	1.7e-06	5.8	6.50e-09	0.05	FALSE
NAcc	Znrd1as1	gene expression	Znrd1as1	0.31	23	0.29	6.7e-45	-6.07	1.30e-09	0.58	FALSE
NAcc	Bag6	isoform ratio	XM_006256088.1	0.02	1	0.02	1.3e-03	-5.45	4.92e-08	0.03	FALSE
NAcc	Bag6	isoform ratio	XM_006256090.1	0.09	3239	0.05	1.3e-07	-5.8	6.79e-09	0.16	FALSE
NAcc	Ddr1	isoform ratio	XM_063278984.1	0.02	1476	0.01	2.1e-02	6.6	4.23e-11	0.1	FALSE
NAcc	LOC120098828	isoform ratio	XR_010060954.1	0.22	2611	0.21	8.3e-32	5.28	1.28e-07	0	FALSE
NAcc	LOC120098829	isoform ratio	XR_010060965.1	0.06	2740	0.04	2.1e-07	5.51	3.61e-08	0.54	FALSE
NAcc	RT1-CE10	isoform ratio	NM_001008833.2	0.23	32	0.25	3.9e-37	-5.39	6.94e-08	0.01	FALSE
NAcc	RT1-CE11	isoform ratio	XM_063279411.1	0.03	7	0.01	4.1e-03	5.31	1.07e-07	0.01	FALSE
NAcc	RT1-CE15	isoform ratio	NM_001008838.2	0.3	55	0.18	1.4e-26	6.24	4.35e-10	0	FALSE
NAcc	RT1-CE15	isoform ratio	XR_010060747.1	0.23	2609	0.1	1.8e-15	5.64	1.70e-08	0	FALSE
NAcc	RT1-CE16	isoform ratio	XM_063279423.1	0.33	2619	0.17	2.8e-25	-5.48	4.30e-08	0	FALSE
NAcc	RT1-T24-4	isoform ratio	XM_063279395.1	0.21	86	0.2	4.9e-29	-6.86	6.86e-12	0.72	FALSE
NAcc	Zfp57	isoform ratio	NM_213565.4	0.07	76	0.03	7.5e-06	5.77	7.73e-09	0.52	FALSE
NAcc	Zfp57	isoform ratio	XM_039098787.2	0.06	71	0.04	4.6e-06	-5.86	4.72e-09	0.5	FALSE
NAcc	Apom	intron excision ratio	chr20_3695809_3696076	0.08	1	0.05	4.4e-08	-5.56	2.75e-08	0.3	FALSE
NAcc	Atp6v1g2	intron excision ratio	chr20_3588267_3589585	0.02	3206	0.01	2.4e-03	-6.33	2.47e-10	0.06	FALSE
NAcc	Bag6	intron excision ratio	chr20_3689007_3689169	0.03	3239	0.02	7.5e-04	6.07	1.29e-09	0.15	FALSE
NAcc	Bag6	intron excision ratio	chr20_3689007_3689462	0.14	3239	0.09	9.2e-14	-5.7	1.19e-08	0.15	FALSE
NAcc	Ddx39b	intron excision ratio	chr20_3588267_3589585	0.02	3208	0.01	2.4e-03	-6.34	2.31e-10	0.06	FALSE
NAcc	Ilrun	intron excision ratio	chr20_5814339_5827328	0.04	1	0.01	2.8e-03	-7.94	2.00e-15	0.2	FALSE
NAcc	LOC108349039	intron excision ratio	chr20_6210978_6236208	0.12	1	0.01	2.5e-02	-8.04	9.14e-16	0.1	FALSE
NAcc	LOC120098828	intron excision ratio	chr20_3323415_3324850	0.13	1	0.09	1.9e-13	-5.42	5.87e-08	0	FALSE
NAcc	LOC120098829	intron excision ratio	chr20_3323415_3324829	0.13	1	0.06	7.9e-09	-5.47	4.56e-08	0.01	FALSE
NAcc	LOC120098829	intron excision ratio	chr20_3323415_3324850	0.1	1	0.09	1.9e-13	-5.42	5.87e-08	0	FALSE
NAcc	LOC134483846	intron excision ratio	chr20_2671263_2712862	0.13	20	0.11	8.1e-16	-6.05	1.43e-09	0	FALSE
NAcc	LOC134483846	intron excision ratio	chr20_2671263_2735001	0.12	57	0.1	2.9e-15	6.03	1.69e-09	0	FALSE
NAcc	LOC134483846	intron excision ratio	chr20_2709656_2712862	0.09	1390	0.08	9.9e-12	5.96	2.46e-09	0	FALSE
NAcc	LOC134483846	intron excision ratio	chr20_2709656_2735001	0.08	1390	0.08	1.5e-11	5.93	2.96e-09	0	FALSE
NAcc	Lsm2	intron excision ratio	chr20_3848861_3851065	0.06	3864	0.04	1.2e-06	-6.24	4.34e-10	0.53	FALSE
NAcc	Lsm2	intron excision ratio	chr20_3851132_3851663	0.05	3864	0.03	1.4e-05	6.18	6.35e-10	0.53	FALSE
NAcc	Pfdn6	intron excision ratio	chr20_4948633_4949114	0.03	6561	0.01	4.6e-03	6.28	3.41e-10	0.35	FALSE
NAcc	RT1-CE10	intron excision ratio	chr20_3384252_3384434	0.24	65	0.16	1.9e-23	5.31	1.11e-07	0	FALSE
NAcc	RT1-CE11	intron excision ratio	chr20_3384252_3384434	0.24	65	0.16	1.9e-23	5.31	1.11e-07	0	FALSE
NAcc	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.61	95	0.56	1.2e-104	5.21	1.88e-07	0	FALSE
NAcc	RT1-CE13	intron excision ratio	chr20_3321999_3322186	0.35	2740	0.43	2.2e-70	5.83	5.47e-09	0	FALSE
NAcc	RT1-CE14	intron excision ratio	chr20_3302299_3302433	0.2	31	0.19	1.9e-28	-5.77	8.09e-09	0	FALSE
NAcc	RT1-CE16	intron excision ratio	chr20_3302299_3302433	0.22	38	0.19	2.9e-28	-5.92	3.18e-09	0	FALSE
NAcc	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.37	2619	0.43	1.5e-70	5.79	7.10e-09	0	FALSE
NAcc	RT1-CE2	intron excision ratio	chr20_3480408_3480539	0.12	6	0.06	1.0e-09	-5.36	8.49e-08	0.01	FALSE
NAcc	RT1-CE5	intron excision ratio	chr20_3480408_3480539	0.12	6	0.06	9.1e-10	-5.38	7.43e-08	0.01	FALSE
NAcc	RT1-T24-1	intron excision ratio	chr20_2696015_2696143	0.61	11	0.17	9.9e-25	-5.9	3.74e-09	0	FALSE
NAcc	RT1-T24-1	intron excision ratio	chr20_2779093_2779221	0.35	14	0.12	1.1e-17	5.51	3.53e-08	0	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2695434_2695740	0.14	19	0.15	1.4e-21	5.22	1.83e-07	0	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2696490_2696880	0.13	1357	0.11	1.1e-15	6.39	1.61e-10	0	FALSE
NAcc	RT1-T24-4	intron excision ratio	chr20_2779093_2779221	0.12	36	0.09	2.1e-13	-5.77	7.72e-09	0	FALSE
NAcc	Sapcd1	intron excision ratio	chr20_3799122_3799601	0.2	3670	0.23	3.9e-34	5.42	5.97e-08	0.36	FALSE
NAcc	Znrd1as1	intron excision ratio	chr20_1594708_1595158	0.03	1	0.01	3.7e-03	6.37	1.84e-10	0.05	FALSE
NAcc	Znrd1as1	intron excision ratio	chr20_1599314_1599608	0.03	1	0.02	1.1e-04	-6.37	1.84e-10	0.1	FALSE
NAcc	Ddx39b	mRNA stability	Ddx39b	0.18	22	0.19	5.6e-28	-6.15	7.56e-10	0.01	FALSE
NAcc	Ehmt2	mRNA stability	Ehmt2	0.06	4033	0.04	4.4e-07	-6.42	1.34e-10	0.77	FALSE
NAcc	Fkbpl	mRNA stability	Fkbpl	0.04	21	0.04	5.9e-07	5.55	2.89e-08	0.25	FALSE
NAcc	Nudt3	mRNA stability	Nudt3	0.07	2415	0.03	6.5e-05	-6.92	4.47e-12	0.87	FALSE
NAcc	Rnf5	mRNA stability	Rnf5	0.1	6916	0.1	5.2e-15	-6.52	7.03e-11	0.68	FALSE
NAcc	Tubb5	mRNA stability	Tubb5	0.03	1	0.01	5.5e-03	-5.26	1.47e-07	0.02	FALSE
NAcc	Vars1	mRNA stability	Vars1	0.07	3765	0.06	6.4e-10	-5.78	7.41e-09	0.12	FALSE
NAcc	Znrd1as1	mRNA stability	Znrd1as1	0.1	2915	0.07	3.3e-10	-5.88	4.15e-09	0.58	FALSE
OFC	RT1-CE11	alternative polyA	NM_001008834.2	0.27	29	0.12	7.4e-04	5.89	3.91e-09	0.03	FALSE
OFC	RT1-CE11	alternative polyA	XM_063279411.1	0.43	3055	0.31	3.8e-08	-6.59	4.52e-11	0.26	FALSE
OFC	RT1-T24-3	alternative polyA	XM_063279401.1	0.5	42	0.31	3.1e-08	5.41	6.45e-08	0	FALSE
OFC	RT1-T24-3	alternative polyA	XM_063279401.1	0.57	1390	0.34	5.6e-09	-6.75	1.51e-11	0	FALSE
OFC	LOC120098828	alternative TSS	XR_010060953.1	0.25	1	0.19	2.6e-05	5.53	3.19e-08	0.04	FALSE
OFC	RT1-CE1	alternative TSS	XM_063279104.1	0.63	3092	0.31	3.2e-08	5.6	2.17e-08	0.14	FALSE
OFC	Anks1a	gene expression	Anks1a	0.28	25	0.12	1.1e-03	6.68	2.37e-11	0.04	FALSE
OFC	Fkbpl	gene expression	Fkbpl	0.59	130	0.44	9.8e-12	-5.63	1.79e-08	0.62	FALSE
OFC	LOC102549726	gene expression	LOC102549726	0.5	3935	0.33	1.1e-08	-5.3	1.19e-07	0.35	FALSE
OFC	LOC108353253	gene expression	LOC108353253	0.48	2620	0.26	5.7e-07	-6.11	9.87e-10	0.48	FALSE
OFC	LOC120098828	gene expression	LOC120098828	0.46	2611	0.29	1.2e-07	-5.24	1.63e-07	0.4	FALSE
OFC	LOC120098833	gene expression	LOC120098833	0.52	3166	0.3	6.8e-08	6	1.95e-09	0.07	FALSE
OFC	Lsm2	gene expression	Lsm2	0.18	3864	0.05	2.1e-02	-5.5	3.80e-08	0.09	FALSE
OFC	Pacsin1	gene expression	Pacsin1	0.49	2411	0.18	4.2e-05	6.98	3.06e-12	0.38	FALSE
OFC	Prr3	gene expression	Prr3	0.24	1496	0.14	3.0e-04	-6.84	7.68e-12	0.34	FALSE
OFC	RT1-CE15	gene expression	RT1-CE15	0.88	26	0.6	9.4e-18	-6.68	2.46e-11	0.18	FALSE
OFC	RT1-CE16	gene expression	RT1-CE16	0.92	36	0.56	7.8e-16	-5.6	2.14e-08	0	FALSE
OFC	RT1-CE5	gene expression	RT1-CE5	0.43	31	0.32	2.1e-08	6.11	1.02e-09	0	FALSE
OFC	RT1-N3	gene expression	RT1-N3	0.76	82	0.46	2.9e-12	5.7	1.19e-08	0.65	FALSE
OFC	RT1-S3	gene expression	RT1-S3	0.27	1303	0.14	3.2e-04	7.04	1.97e-12	0.22	FALSE
OFC	Tnxa-ps1	gene expression	Tnxa-ps1	0.38	1	0.26	5.7e-07	-5.46	4.76e-08	0.11	FALSE
OFC	Anks1a	isoform ratio	XM_063279125.1	0.14	1	0.07	9.3e-03	5.25	1.54e-07	0.05	FALSE
OFC	Ilrun	isoform ratio	NM_001039607.2	0.27	1	0.25	1.0e-06	5.3	1.15e-07	0.05	FALSE
OFC	Ilrun	isoform ratio	NM_001410292.1	0.25	13	0.22	4.9e-06	5.3	1.15e-07	0	FALSE
OFC	Rps10	isoform ratio	NM_031109.2	0.75	496	0.44	8.8e-12	5.41	6.25e-08	0	FALSE
OFC	RT1-CE10	isoform ratio	NM_001008833.2	0.29	19	0.18	5.1e-05	5.52	3.32e-08	0.01	FALSE
OFC	RT1-T24-4	isoform ratio	XM_063279395.1	0.32	1	0.2	1.5e-05	-6.56	5.50e-11	0.08	FALSE
OFC	Ilrun	intron excision ratio	chr20_5814339_5827103	0.17	1	0.12	9.6e-04	-5.3	1.15e-07	0.05	FALSE
OFC	Ilrun	intron excision ratio	chr20_5814339_5827328	0.58	13	0.2	1.6e-05	-7.21	5.45e-13	0.05	FALSE
OFC	RT1-A1	intron excision ratio	chr20_4873436_4908004	0.27	20	0.07	9.3e-03	5.3	1.19e-07	0.11	FALSE
OFC	RT1-A2	intron excision ratio	chr20_4873436_4908004	0.28	24	0.07	8.9e-03	5.22	1.77e-07	0.11	FALSE
OFC	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.7	3055	0.2	1.7e-05	-6.44	1.17e-10	0.02	FALSE
OFC	RT1-CE11	intron excision ratio	chr20_3281387_3360940	0.17	1	0.09	4.6e-03	-5.5	3.75e-08	0.05	FALSE
OFC	RT1-CE12	intron excision ratio	chr20_3263417_3264387	0.69	2959	0.21	9.5e-06	-6.47	9.65e-11	0.02	FALSE
OFC	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.66	2740	0.22	4.8e-06	-6.47	9.77e-11	0.02	FALSE
OFC	RT1-CE14	intron excision ratio	chr20_3302299_3302433	0.34	2648	0.18	5.3e-05	6.05	1.45e-09	0.52	FALSE
OFC	RT1-CE15	intron excision ratio	chr20_3263417_3264387	0.67	2609	0.23	4.4e-06	-6.53	6.75e-11	0.02	FALSE
OFC	RT1-CE15	intron excision ratio	chr20_3281387_3360940	0.17	1	0.09	4.6e-03	-5.52	3.30e-08	0.05	FALSE
OFC	RT1-CE16	intron excision ratio	chr20_3262497_3262706	0.55	2619	0.22	5.6e-06	-5.97	2.37e-09	0.06	FALSE
OFC	RT1-CE16	intron excision ratio	chr20_3263417_3264387	0.67	2619	0.23	4.1e-06	-6.52	6.82e-11	0.02	FALSE
OFC	RT1-CE16	intron excision ratio	chr20_3302299_3302433	0.35	2619	0.17	6.1e-05	6.11	1.01e-09	0.54	FALSE
OFC	RT1-CE1	intron excision ratio	chr20_3463812_3480859	0.65	3092	0.24	1.8e-06	5.4	6.49e-08	0	FALSE
OFC	RT1-CE1	intron excision ratio	chr20_3522211_3522389	0.56	1	0.08	6.2e-03	5.78	7.46e-09	0.05	FALSE
OFC	RT1-CE2	intron excision ratio	chr20_3463812_3480859	0.65	3086	0.24	1.8e-06	5.42	6.08e-08	0	FALSE
OFC	RT1-CE2	intron excision ratio	chr20_3522211_3522389	0.57	1	0.08	6.2e-03	5.78	7.46e-09	0.05	FALSE
OFC	RT1-CE3	intron excision ratio	chr20_3463812_3480859	0.65	3129	0.24	1.8e-06	5.42	5.93e-08	0	FALSE
OFC	RT1-CE3	intron excision ratio	chr20_3522211_3522389	0.56	1	0.08	6.2e-03	5.78	7.46e-09	0.05	FALSE
OFC	RT1-CE4	intron excision ratio	chr20_3463812_3480859	0.65	3147	0.24	1.8e-06	5.43	5.74e-08	0	FALSE
OFC	RT1-CE4	intron excision ratio	chr20_3522211_3522389	0.56	1	0.08	6.2e-03	5.78	7.46e-09	0.05	FALSE
OFC	RT1-CE5	intron excision ratio	chr20_3463812_3480859	0.65	3165	0.24	1.8e-06	5.44	5.22e-08	0	FALSE
OFC	RT1-CE5	intron excision ratio	chr20_3522211_3522389	0.56	1	0.08	6.2e-03	5.78	7.46e-09	0.05	FALSE
OFC	RT1-T24-3	intron excision ratio	chr20_2728734_2729040	0.22	1390	0.03	8.4e-02	7.01	2.38e-12	0.18	FALSE
OFC	RT1-T24-4	intron excision ratio	chr20_2728734_2729040	0.22	1357	0.03	8.4e-02	7.01	2.31e-12	0.18	FALSE
OFC	Rnf5	mRNA stability	Rnf5	0.29	6916	0.14	3.0e-04	-6.55	5.82e-11	0.6	FALSE
PL	RT1-CE11	alternative polyA	NM_001008834.2	0.65	30	0.48	6.8e-59	6.52	6.94e-11	0.01	FALSE
PL	RT1-CE11	alternative polyA	XM_063279411.1	0.51	3055	0.31	3.0e-34	-6.31	2.72e-10	0.01	FALSE
PL	RT1-CE11	alternative polyA	XM_063279416.1	0.1	55	0.11	6.7e-12	5.85	5.03e-09	0	FALSE
PL	RT1-CE12	alternative polyA	XM_063279094.1	0.25	2959	0.17	4.7e-18	5.68	1.34e-08	0	FALSE
PL	RT1-CE12	alternative polyA	XM_063279095.1	0.27	2959	0.17	3.9e-18	-5.46	4.90e-08	0	FALSE
PL	RT1-CE13	alternative polyA	XM_063279407.1	0.06	1	0.04	2.1e-05	-5.61	1.99e-08	0.02	FALSE
PL	RT1-CE16	alternative polyA	XM_063279421.1	0.21	1	0.09	9.0e-10	-5.45	4.97e-08	0	FALSE
PL	RT1-CE16	alternative polyA	XM_063279423.1	0.21	2619	0.08	2.1e-09	-5.66	1.54e-08	0	FALSE
PL	Taf11	alternative polyA	NM_001008350.1	0.09	17	0.07	6.4e-08	5.39	6.99e-08	0	FALSE
PL	Taf11	alternative polyA	XM_063279123.1	0.06	12	0.04	3.2e-05	-5.87	4.36e-09	0	FALSE
PL	Dhx16	alternative TSS	NM_212496.2	0.03	1	0.03	6.6e-04	-6.4	1.59e-10	0.04	FALSE
PL	Dhx16	alternative TSS	XM_039098481.2	0.03	1	0.02	6.3e-03	6.4	1.59e-10	0.04	FALSE
PL	LOC120098828	alternative TSS	XR_010060952.1	0.27	1	0.17	2.5e-18	-5.35	8.73e-08	0	FALSE
PL	LOC120098828	alternative TSS	XR_010060953.1	0.31	13	0.21	5.0e-22	5.92	3.18e-09	0	FALSE
PL	Ppt2	alternative TSS	XM_006256020.5	0.04	1	0.02	1.9e-03	-5.73	1.00e-08	0.11	FALSE
PL	Ppt2	alternative TSS	XM_006256020.5	0.04	1	0.02	2.2e-03	-5.92	3.32e-09	0.19	FALSE
PL	Rpp21	alternative TSS	XM_063279380.1	0.02	1	0.02	6.7e-03	-5.8	6.50e-09	0.03	FALSE
PL	RT1-CE10	alternative TSS	NM_001008833.2	0.1	3056	0.07	1.9e-08	6.42	1.35e-10	0.1	FALSE
PL	RT1-CE16	alternative TSS	XM_063279421.1	0.02	2603	0.01	1.1e-02	6.5	8.20e-11	0.14	FALSE
PL	RT1-CE16	alternative TSS	XM_063279422.1	0.03	2619	0.01	2.0e-02	-6.53	6.76e-11	0.16	FALSE
PL	RT1-CE1	alternative TSS	XM_063279104.1	0.11	8	0.06	3.1e-07	5.63	1.84e-08	0	FALSE
PL	RT1-T24-4	alternative TSS	XM_063279394.1	0.03	1357	0.01	1.3e-02	7.1	1.24e-12	0.5	FALSE
PL	Taf11	alternative TSS	NM_001008350.1	0.04	2415	0.04	4.3e-05	6.08	1.22e-09	0	FALSE
PL	Ddx39b	gene expression	Ddx39b	0.31	3208	0.42	4.6e-49	-6.39	1.71e-10	0	FALSE
PL	Def6	gene expression	Def6	0.02	1	0.03	8.1e-04	5.43	5.52e-08	0.03	FALSE
PL	Egfl8	gene expression	Egfl8	0.07	83	0.06	1.1e-06	5.38	7.27e-08	0.32	FALSE
PL	Fkbpl	gene expression	Fkbpl	0.58	26	0.6	3.9e-82	6.32	2.64e-10	0.7	FALSE
PL	Gnl1	gene expression	Gnl1	0.1	1498	0.1	6.4e-11	6.41	1.42e-10	0	FALSE
PL	LOC102549726	gene expression	LOC102549726	0.63	3935	0.39	9.9e-45	-5.42	6.03e-08	0.75	FALSE
PL	LOC108349039	gene expression	LOC108349039	0.35	1	0.47	8.4e-58	-5.58	2.35e-08	0	FALSE
PL	LOC120098827	gene expression	LOC120098827	0.39	2288	0.27	6.3e-30	-5.98	2.27e-09	0.73	FALSE
PL	LOC120098833	gene expression	LOC120098833	0.61	33	0.59	3.5e-80	5.59	2.25e-08	0	FALSE
PL	LOC120098859	gene expression	LOC120098859	0.07	30	0.12	1.6e-12	-5.31	1.10e-07	0	FALSE
PL	LOC120098968	gene expression	LOC120098968	0.22	1379	0.14	1.3e-14	-6.97	3.24e-12	0.69	FALSE
PL	LOC120098979	gene expression	LOC120098979	0.18	1	0.07	2.4e-08	-5.75	8.85e-09	0.85	FALSE
PL	LOC134483855	gene expression	LOC134483855	0.13	1	0.06	9.2e-07	-5.5	3.79e-08	0.01	FALSE
PL	Lsm2	gene expression	Lsm2	0.13	1	0.09	3.4e-10	5.53	3.16e-08	0.63	FALSE
PL	Nudt3	gene expression	Nudt3	0.21	2415	0.12	3.1e-13	-5.74	9.48e-09	0.04	FALSE
PL	Pacsin1	gene expression	Pacsin1	0.24	2411	0.22	6.1e-24	6.58	4.83e-11	0	FALSE
PL	Pou5f1	gene expression	Pou5f1	0.05	2461	0.03	1.8e-04	-6.45	1.11e-10	0.02	FALSE
PL	Rps10	gene expression	Rps10	0.51	15	0.41	5.3e-48	6.15	7.92e-10	0	FALSE
PL	RT1-Ba	gene expression	RT1-Ba	0.1	7013	0.05	1.8e-06	-5.33	9.78e-08	0.09	FALSE
PL	RT1-CE15	gene expression	RT1-CE15	0.69	2609	0.57	2.4e-75	-6	2.01e-09	0	FALSE
PL	RT1-CE16	gene expression	RT1-CE16	0.75	339	0.75	2.8e-124	5.91	3.32e-09	0	FALSE
PL	RT1-CE5	gene expression	RT1-CE5	0.46	3165	0.19	4.0e-20	5.56	2.65e-08	0	FALSE
PL	RT1-N3	gene expression	RT1-N3	0.52	117	0.49	2.5e-61	7.17	7.27e-13	0.76	FALSE
PL	Scube3	gene expression	Scube3	0.02	1	0.03	5.6e-04	5.32	1.04e-07	0.03	FALSE
PL	Skic2	gene expression	Skic2	0.18	254	0.15	4.9e-16	-5.51	3.60e-08	0.26	FALSE
PL	Tnxa-ps1	gene expression	Tnxa-ps1	0.32	35	0.2	5.7e-21	-6.11	1.02e-09	0.79	FALSE
PL	Vwa7	gene expression	Vwa7	0.05	3718	0.03	3.1e-04	6.53	6.58e-11	0.5	FALSE
PL	Znrd1as1	gene expression	Znrd1as1	0.26	2915	0.21	8.7e-23	-5.89	3.96e-09	0.58	FALSE
PL	Atp6v1g2	isoform ratio	XM_039098921.2	0.04	1	0.03	6.8e-04	-5.57	2.55e-08	0.03	FALSE
PL	Ilrun	isoform ratio	NM_001410292.1	0.15	1	0.1	1.1e-10	-5.26	1.46e-07	0	FALSE
PL	LOC108349039	isoform ratio	XR_010060993.1	0.19	1	0.23	2.4e-25	-5.58	2.42e-08	0	FALSE
PL	LOC108349039	isoform ratio	XR_010061002.1	0.09	1	0.01	9.8e-03	7.94	2.00e-15	0.07	FALSE
PL	LOC120098828	isoform ratio	XR_010060954.1	0.49	61	0.31	8.8e-35	-5.38	7.36e-08	0	FALSE
PL	LOC120098832	isoform ratio	XR_010060950.1	0.31	12	0.23	5.6e-25	5.51	3.60e-08	0.01	FALSE
PL	RT1-CE10	isoform ratio	NM_001008833.2	0.48	26	0.28	1.5e-30	-5.47	4.56e-08	0.01	FALSE
PL	RT1-CE11	isoform ratio	XM_063279411.1	0.13	3055	0.07	9.1e-08	-6.19	6.18e-10	0.02	FALSE
PL	RT1-CE15	isoform ratio	NM_001008838.2	0.32	79	0.24	3.1e-26	5.91	3.50e-09	0	FALSE
PL	RT1-CE15	isoform ratio	XR_010060747.1	0.14	8	0.11	6.0e-12	5.76	8.18e-09	0	FALSE
PL	RT1-CE16	isoform ratio	XM_063279423.1	0.39	1	0.23	3.0e-24	5.53	3.19e-08	0.01	FALSE
PL	RT1-T24-4	isoform ratio	NM_001008826.3	0.18	1357	0.13	2.2e-14	-6.12	9.57e-10	0.7	FALSE
PL	RT1-T24-4	isoform ratio	XM_063279395.1	0.28	14	0.27	3.9e-29	5.77	8.11e-09	0.13	FALSE
PL	Bag6	intron excision ratio	chr20_3692428_3692926	0.03	1	0.01	6.1e-02	5.48	4.14e-08	0.03	FALSE
PL	C4a	intron excision ratio	chr20_4020426_4020954	0.03	4565	0.01	1.7e-02	-5.61	2.00e-08	0.15	FALSE
PL	Cchcr1	intron excision ratio	chr20_3222005_3222255	0.03	1	0.02	1.7e-03	6.44	1.20e-10	0.04	FALSE
PL	Dhx16	intron excision ratio	chr20_2873408_2873611	0.03	8	0.01	1.3e-02	-6	2.00e-09	0.59	FALSE
PL	Ilrun	intron excision ratio	chr20_5814339_5827103	0.03	1	0.03	4.0e-04	-5.26	1.46e-07	0.03	FALSE
PL	Ilrun	intron excision ratio	chr20_5814339_5827328	0.07	2400	0.03	2.8e-04	-6.97	3.12e-12	0.2	FALSE
PL	LOC108349039	intron excision ratio	chr20_6181874_6207088	0.09	1	0.08	2.4e-09	-5.55	2.80e-08	0	FALSE
PL	LOC120098828	intron excision ratio	chr20_3323415_3324829	0.12	1	0.08	5.8e-09	-5.47	4.56e-08	0	FALSE
PL	LOC120098828	intron excision ratio	chr20_3323415_3324850	0.13	2611	0.1	1.7e-11	6.57	5.04e-11	0.01	FALSE
PL	LOC120098829	intron excision ratio	chr20_3323415_3324829	0.1	1	0.08	5.8e-09	-5.47	4.56e-08	0.01	FALSE
PL	LOC120098829	intron excision ratio	chr20_3323415_3324850	0.11	2740	0.11	1.5e-11	6.47	1.00e-10	0.01	FALSE
PL	LOC120098832	intron excision ratio	chr20_3323415_3324829	0.1	1	0.08	5.8e-09	-5.47	4.56e-08	0.01	FALSE
PL	LOC120098832	intron excision ratio	chr20_3323415_3324850	0.11	3003	0.11	1.4e-11	6.44	1.23e-10	0.01	FALSE
PL	LOC134483846	intron excision ratio	chr20_2671263_2712862	0.25	1	0.21	1.7e-22	6.62	3.54e-11	0.78	FALSE
PL	LOC134483846	intron excision ratio	chr20_2671263_2735001	0.27	1	0.22	1.8e-23	6.62	3.54e-11	0.78	FALSE
PL	RT1-CE10	intron excision ratio	chr20_3262317_3262450	0.39	84	0.34	1.2e-37	5.47	4.45e-08	0.01	FALSE
PL	RT1-CE10	intron excision ratio	chr20_3262497_3262706	0.51	52	0.56	1.9e-73	5.51	3.55e-08	0	FALSE
PL	RT1-CE10	intron excision ratio	chr20_3302299_3302433	0.17	3056	0.15	5.3e-16	5.39	6.96e-08	0.01	FALSE
PL	RT1-CE10	intron excision ratio	chr20_3384252_3384434	0.28	3056	0.18	2.2e-19	-5.32	1.06e-07	0	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3262317_3262450	0.39	84	0.34	1.2e-37	5.47	4.44e-08	0.01	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3262497_3262706	0.51	52	0.56	1.9e-73	5.51	3.55e-08	0	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.56	65	0.55	8.2e-72	-5.49	3.97e-08	0	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3302299_3302433	0.17	3055	0.15	5.3e-16	5.39	6.97e-08	0.01	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3360812_3360940	0.03	1	0.01	1.4e-02	5.48	4.14e-08	0.03	FALSE
PL	RT1-CE11	intron excision ratio	chr20_3384252_3384434	0.28	3055	0.18	2.2e-19	-5.32	1.06e-07	0	FALSE
PL	RT1-CE14	intron excision ratio	chr20_3262317_3262450	0.43	46	0.34	6.6e-38	5.33	9.89e-08	0	FALSE
PL	RT1-CE14	intron excision ratio	chr20_3262497_3262706	0.58	43	0.56	1.2e-73	5.52	3.37e-08	0	FALSE
PL	RT1-CE14	intron excision ratio	chr20_3302299_3302433	0.18	2648	0.15	1.1e-15	5.5	3.91e-08	0	FALSE
PL	RT1-CE15	intron excision ratio	chr20_3262317_3262450	0.45	44	0.34	7.6e-38	5.34	9.48e-08	0	FALSE
PL	RT1-CE15	intron excision ratio	chr20_3262497_3262706	0.61	46	0.56	4.7e-74	5.57	2.57e-08	0	FALSE
PL	RT1-CE16	intron excision ratio	chr20_3262317_3262450	0.46	50	0.34	6.6e-38	5.55	2.88e-08	0	FALSE
PL	RT1-CE16	intron excision ratio	chr20_3262497_3262706	0.63	52	0.56	6.7e-74	5.6	2.11e-08	0	FALSE
PL	RT1-CE2	intron excision ratio	chr20_3480408_3480539	0.04	3086	0.01	3.7e-02	-6.3	2.95e-10	0.04	FALSE
PL	RT1-CE5	intron excision ratio	chr20_3480408_3480539	0.04	3165	0.01	3.1e-02	-6.28	3.38e-10	0.04	FALSE
PL	RT1-T24-3	intron excision ratio	chr20_2689467_2693512	0.18	15	0.15	7.7e-16	5.37	7.83e-08	0	FALSE
PL	RT1-T24-3	intron excision ratio	chr20_2693808_2695162	0.16	1390	0.13	1.5e-14	5.7	1.22e-08	0	FALSE
PL	RT1-T24-4	intron excision ratio	chr20_2689467_2693512	0.18	15	0.15	8.0e-16	5.38	7.61e-08	0	FALSE
PL	RT1-T24-4	intron excision ratio	chr20_2693808_2695162	0.16	1357	0.13	1.6e-14	5.71	1.10e-08	0	FALSE
PL	Sapcd1	intron excision ratio	chr20_3799122_3799601	0.2	24	0.18	2.2e-19	5.95	2.72e-09	0.1	FALSE
PL	Brpf3	mRNA stability	Brpf3	0.05	1	0.06	1.8e-07	-5.45	4.93e-08	0	FALSE
PL	Flot1	mRNA stability	Flot1	0.19	1513	0.03	1.7e-04	-7.11	1.17e-12	0.54	FALSE
PL	LOC108349039	mRNA stability	LOC108349039	0.29	40	0.45	1.3e-54	5.34	9.17e-08	0	FALSE
PL	Pbx2	mRNA stability	Pbx2	0.03	1	0.03	3.5e-04	5.71	1.10e-08	0.07	FALSE
PL	Rnf5	mRNA stability	Rnf5	0.21	8	0.23	3.0e-24	-5.86	4.50e-09	0.69	FALSE
PL	Rps10	mRNA stability	Rps10	0.25	1	0.21	5.0e-22	6.18	6.30e-10	0	FALSE
PL	Smim29	mRNA stability	Smim29	0.06	1	0.09	3.4e-10	-5.3	1.15e-07	0	FALSE
PL	Vars1	mRNA stability	Vars1	0.03	1	0.01	4.3e-02	5.6	2.12e-08	0.05	FALSE
pVTA	RT1-CE11	alternative polyA	NM_001008834.2	0.48	158	0.46	2.2e-41	-5.8	6.62e-09	0.01	FALSE
pVTA	RT1-CE11	alternative polyA	XM_063279411.1	0.73	154	0.41	6.6e-35	5.29	1.23e-07	0.01	FALSE
pVTA	RT1-CE13	alternative polyA	XM_063279405.1	0.22	2740	0.11	7.8e-09	5.74	9.41e-09	0.01	FALSE
pVTA	RT1-CE16	alternative polyA	XM_063279421.1	0.12	1	0.09	1.6e-07	-5.44	5.27e-08	0.01	FALSE
pVTA	RT1-CE16	alternative polyA	XM_063279423.1	0.11	1	0.09	8.0e-08	5.44	5.27e-08	0.01	FALSE
pVTA	RT1-Db1	alternative polyA	NM_001008884.2	0.08	7028	0.06	2.0e-05	5.3	1.16e-07	0.07	FALSE
pVTA	RT1-Db1	alternative polyA	XM_063279016.1	0.08	7028	0.06	2.4e-05	-5.39	6.86e-08	0.08	FALSE
pVTA	RT1-T24-3	alternative polyA	XM_063279403.1	0.44	27	0.26	4.9e-21	5.48	4.20e-08	0	FALSE
pVTA	RT1-T24-3	alternative polyA	XM_063279403.1	0.54	34	0.29	3.3e-23	5.39	6.92e-08	0	FALSE
pVTA	Taf11	alternative polyA	NM_001008350.1	0.06	1	0.05	1.4e-04	-5.55	2.88e-08	0.03	FALSE
pVTA	Taf11	alternative polyA	XM_063279123.1	0.05	1	0.04	2.3e-04	5.55	2.88e-08	0.03	FALSE
pVTA	Taf11	alternative polyA	XM_039098682.2	0.27	68	0.24	6.3e-19	5.79	7.09e-09	0	FALSE
pVTA	Taf11	alternative polyA	XM_063279121.1	0.3	107	0.24	1.5e-19	-5.7	1.16e-08	0	FALSE
pVTA	Vwa7	alternative polyA	NM_212499.2	0.06	2	0.03	1.1e-03	-5.94	2.81e-09	0.38	FALSE
pVTA	Anks1a	alternative TSS	NM_001414943.1	0.05	2415	0.02	5.8e-03	7.4	1.37e-13	0.37	FALSE
pVTA	Anks1a	alternative TSS	NM_001414943.1	0.05	7	0.04	5.2e-04	7.54	4.57e-14	0.31	FALSE
pVTA	Anks1a	alternative TSS	XM_006256193.5	0.05	8	0.03	1.3e-03	-7.26	3.87e-13	0.22	FALSE
pVTA	Atp6v1g2	alternative TSS	NM_212490.2	0.11	1	0.05	7.1e-05	5.35	8.73e-08	0.03	FALSE
pVTA	Atp6v1g2	alternative TSS	XM_039098921.2	0.1	1	0.06	1.8e-05	-5.35	8.73e-08	0.02	FALSE
pVTA	Ddr1	alternative TSS	XM_017601561.3	0.06	9	0.03	3.3e-03	6.3	2.93e-10	0.35	FALSE
pVTA	LOC120098828	alternative TSS	XR_010060952.1	0.3	33	0.15	3.1e-12	-5.26	1.46e-07	0.03	TRUE
pVTA	LOC120098828	alternative TSS	XR_010060953.1	0.27	1	0.14	2.1e-11	5.78	7.46e-09	0.03	FALSE
pVTA	RT1-CE10	alternative TSS	NM_001008833.2	0.19	109	0.14	3.4e-11	-5.77	8.02e-09	0.01	FALSE
pVTA	RT1-CE16	alternative TSS	NM_001008839.2	0.08	2619	0.04	1.9e-04	-6.79	1.16e-11	0.06	FALSE
pVTA	RT1-CE16	alternative TSS	XM_063279421.1	0.05	2619	0.02	9.3e-03	6.28	3.43e-10	0.03	FALSE
pVTA	RT1-CE16	alternative TSS	XM_063279421.1	0.11	2619	0.08	2.6e-07	6.39	1.61e-10	0	FALSE
pVTA	RT1-CE16	alternative TSS	XM_063279422.1	0.12	2619	0.09	7.6e-08	-6.39	1.68e-10	0	FALSE
pVTA	RT1-CE1	alternative TSS	XM_063279104.1	0.11	32	0.1	1.7e-08	6.32	2.60e-10	0.01	FALSE
pVTA	Atp6v1g2	gene expression	Atp6v1g2	0.11	3206	0.1	3.3e-08	-6.48	9.05e-11	0.01	FALSE
pVTA	Btnl3	gene expression	Btnl3	0.59	13	0.52	4.9e-48	-5.23	1.66e-07	0.69	FALSE
pVTA	Ddx39b	gene expression	Ddx39b	0.46	38	0.42	1.5e-36	-5.37	7.87e-08	0	FALSE
pVTA	Def6	gene expression	Def6	0.08	2124	0.03	1.4e-03	-5.68	1.38e-08	0.06	FALSE
pVTA	Egfl8	gene expression	Egfl8	0.06	6865	0.02	7.0e-03	-6.26	3.88e-10	0.2	FALSE
pVTA	Fkbpl	gene expression	Fkbpl	0.45	414	0.35	9.1e-29	-6.18	6.59e-10	0.11	FALSE
pVTA	Flot1	gene expression	Flot1	0.32	28	0.06	6.6e-06	-6.6	4.08e-11	0.32	FALSE
pVTA	Gabbr1	gene expression	Gabbr1	0.04	3649	0.01	6.9e-02	-6.09	1.13e-09	0.13	FALSE
pVTA	Ggnbp1	gene expression	Ggnbp1	0.18	4115	0.1	1.4e-08	5.6	2.08e-08	0	FALSE
pVTA	Gnl1	gene expression	Gnl1	0.05	1498	0.03	8.6e-04	6.5	8.08e-11	0.06	FALSE
pVTA	Ilrun	gene expression	Ilrun	0.86	147	0.64	3.9e-66	-6.77	1.30e-11	0.9	FALSE
pVTA	LOC102549726	gene expression	LOC102549726	0.29	1	0.24	1.1e-19	5.63	1.83e-08	0.74	FALSE
pVTA	LOC108349035	gene expression	LOC108349035	0.15	1	0.12	1.0e-09	5.87	4.29e-09	0.69	FALSE
pVTA	LOC108349039	gene expression	LOC108349039	0.25	1	0.29	3.5e-23	-5.43	5.54e-08	0	FALSE
pVTA	LOC120098829	gene expression	LOC120098829	0.62	2740	0.55	7.5e-53	5.96	2.55e-09	0	FALSE
pVTA	LOC120098832	gene expression	LOC120098832	0.11	3003	0.09	1.1e-07	-6.37	1.91e-10	0	FALSE
pVTA	LOC120098833	gene expression	LOC120098833	0.54	75	0.5	1.7e-45	-5.95	2.67e-09	0.01	FALSE
pVTA	LOC120098968	gene expression	LOC120098968	0.13	35	0.06	6.1e-06	7.2	5.89e-13	0.7	FALSE
pVTA	LOC120098979	gene expression	LOC120098979	0.11	3942	0.1	1.5e-08	5.23	1.70e-07	0.31	FALSE
pVTA	LOC134483853	gene expression	LOC134483853	0.51	24	0.53	2.4e-49	5.72	1.04e-08	0	FALSE
pVTA	Mog	gene expression	Mog	0.4	1	0.23	3.9e-18	6.23	4.54e-10	0.44	FALSE
pVTA	Nudt3	gene expression	Nudt3	0.28	478	0.23	1.6e-18	5.68	1.38e-08	0.8	FALSE
pVTA	Pacsin1	gene expression	Pacsin1	0.19	11	0.1	4.6e-08	6.97	3.26e-12	0.91	FALSE
pVTA	Ppp1r11	gene expression	Ppp1r11	0.04	1	0.03	1.6e-03	6.08	1.24e-09	0.03	FALSE
pVTA	Prr3	gene expression	Prr3	0.15	16	0.13	2.4e-10	6.07	1.27e-09	0	FALSE
pVTA	Rps10	gene expression	Rps10	0.59	23	0.5	4.6e-46	6.26	3.86e-10	0	FALSE
pVTA	RT1-CE10	gene expression	RT1-CE10	0.61	14	0.56	3.6e-53	-6.23	4.81e-10	0.01	FALSE
pVTA	RT1-CE11	gene expression	RT1-CE11	0.09	67	0.05	5.6e-05	6.47	9.63e-11	0.02	FALSE
pVTA	RT1-CE12	gene expression	RT1-CE12	0.41	97	0.4	8.4e-34	-6.03	1.61e-09	0	FALSE
pVTA	RT1-CE14	gene expression	RT1-CE14	0.65	2648	0.51	4.6e-47	-5.9	3.75e-09	0	FALSE
pVTA	RT1-CE15	gene expression	RT1-CE15	0.58	2609	0.45	8.2e-40	-5.62	1.90e-08	0	FALSE
pVTA	RT1-CE16	gene expression	RT1-CE16	0.72	47	0.63	9.3e-65	-6.06	1.33e-09	0	FALSE
pVTA	RT1-CE5	gene expression	RT1-CE5	0.36	28	0.16	6.2e-13	-5.26	1.47e-07	0.01	FALSE
pVTA	RT1-N3	gene expression	RT1-N3	0.32	51	0.28	6.0e-23	-6.49	8.67e-11	0.76	FALSE
pVTA	Sapcd1	gene expression	Sapcd1	0.17	3670	0.15	6.9e-12	6.07	1.31e-09	0.35	FALSE
pVTA	Skic2	gene expression	Skic2	0.19	4376	0.15	2.0e-12	5.4	6.83e-08	0.26	FALSE
pVTA	Tcp11	gene expression	Tcp11	0.06	2249	0.02	7.9e-03	6.5	8.08e-11	0.04	FALSE
pVTA	Trim10	gene expression	Trim10	0.08	2465	0.07	2.3e-06	-6.15	7.52e-10	0.57	FALSE
pVTA	Trim31	gene expression	Trim31	0.07	1	0.06	2.3e-05	6.25	4.08e-10	0.09	FALSE
pVTA	Vwa7	gene expression	Vwa7	0.31	3718	0.3	3.7e-24	6.25	4.05e-10	0.38	FALSE
pVTA	Znrd1as1	gene expression	Znrd1as1	0.23	61	0.19	6.1e-15	6.89	5.62e-12	0.59	FALSE
pVTA	Atp6v1g2	isoform ratio	NM_212490.2	0.07	1	0.06	2.9e-05	5.68	1.33e-08	0.04	FALSE
pVTA	Atp6v1g2	isoform ratio	XM_039098921.2	0.07	1	0.05	8.0e-05	-5.68	1.33e-08	0.03	FALSE
pVTA	LOC120098828	isoform ratio	XR_010060954.1	0.17	1	0.13	8.4e-11	-5.38	7.37e-08	0	FALSE
pVTA	RT1-CE10	isoform ratio	NM_001008833.2	0.45	38	0.42	4.2e-36	5.24	1.62e-07	0.01	FALSE
pVTA	RT1-CE15	isoform ratio	NM_001008838.2	0.39	2609	0.29	1.8e-23	-6.12	9.63e-10	0	FALSE
pVTA	RT1-CE15	isoform ratio	XR_010060747.1	0.36	90	0.29	2.8e-23	-5.93	3.12e-09	0	FALSE
pVTA	RT1-T24-4	isoform ratio	NM_001008826.3	0.15	1357	0.08	3.4e-07	-6.21	5.23e-10	0.71	FALSE
pVTA	RT1-T24-4	isoform ratio	XM_063279395.1	0.57	252	0.41	6.1e-35	-5.31	1.11e-07	0	FALSE
pVTA	Taf11	isoform ratio	NM_001008350.1	0.49	139	0.39	1.0e-32	-5.42	6.05e-08	0	FALSE
pVTA	Vwa7	isoform ratio	XR_010060676.1	0.07	1	0.05	1.0e-04	-5.37	8.00e-08	0.06	FALSE
pVTA	Atp6v1g2	intron excision ratio	chr20_3594033_3594317	0.07	3206	0.06	6.6e-06	-6.32	2.67e-10	0.39	FALSE
pVTA	Bag6	intron excision ratio	chr20_3689007_3689462	0.13	3239	0.1	1.5e-08	-5.86	4.55e-09	0.15	FALSE
pVTA	C4a	intron excision ratio	chr20_4020426_4020954	0.06	1	0.07	1.9e-06	5.46	4.78e-08	0.21	FALSE
pVTA	LOC120098828	intron excision ratio	chr20_3323415_3324850	0.2	26	0.19	1.5e-15	5.45	5.18e-08	0	FALSE
pVTA	LOC120098829	intron excision ratio	chr20_3323415_3324850	0.18	66	0.19	1.6e-15	-5.69	1.30e-08	0	FALSE
pVTA	LOC120098832	intron excision ratio	chr20_3323415_3324850	0.18	3003	0.19	1.7e-15	6.05	1.42e-09	0	FALSE
pVTA	Lsm2	intron excision ratio	chr20_3848861_3851065	0.03	3844	0.02	6.0e-03	-6.12	9.13e-10	0.26	FALSE
pVTA	Rnf5	intron excision ratio	chr20_4151612_4151694	0.07	6916	0.04	2.5e-04	5.55	2.91e-08	0.21	FALSE
pVTA	Rnf5	intron excision ratio	chr20_4151748_4151824	0.07	6916	0.04	2.6e-04	-5.66	1.47e-08	0.38	FALSE
pVTA	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.61	53	0.6	9.2e-60	-5.73	9.98e-09	0.01	FALSE
pVTA	RT1-CE11	intron excision ratio	chr20_3281387_3303197	0.26	55	0.31	1.2e-25	-5.7	1.19e-08	0	FALSE
pVTA	RT1-CE11	intron excision ratio	chr20_3345172_3362182	0.51	31	0.31	1.0e-25	5.25	1.52e-07	0.01	FALSE
pVTA	RT1-CE12	intron excision ratio	chr20_3263417_3264387	0.62	45	0.6	8.9e-60	-5.74	9.58e-09	0.01	FALSE
pVTA	RT1-CE12	intron excision ratio	chr20_3345172_3362182	0.54	33	0.31	1.1e-25	5.24	1.58e-07	0.01	FALSE
pVTA	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.64	28	0.6	5.1e-60	-5.75	8.83e-09	0.02	FALSE
pVTA	RT1-CE13	intron excision ratio	chr20_3321999_3322186	0.62	84	0.49	1.6e-44	-5.8	6.60e-09	0	FALSE
pVTA	RT1-CE13	intron excision ratio	chr20_3345172_3362182	0.57	27	0.31	1.1e-25	5.23	1.66e-07	0.02	FALSE
pVTA	RT1-CE14	intron excision ratio	chr20_3262317_3262450	0.1	2648	0.07	1.3e-06	-5.69	1.25e-08	0.08	FALSE
pVTA	RT1-CE14	intron excision ratio	chr20_3281387_3303197	0.31	109	0.31	1.2e-25	-5.73	9.94e-09	0	FALSE
pVTA	RT1-CE15	intron excision ratio	chr20_3263417_3264387	0.65	25	0.6	4.9e-60	-5.77	8.12e-09	0.02	FALSE
pVTA	RT1-CE15	intron excision ratio	chr20_3281387_3303197	0.33	110	0.32	4.7e-26	-5.73	9.81e-09	0	FALSE
pVTA	RT1-CE15	intron excision ratio	chr20_3345172_3362182	0.6	26	0.31	1.0e-25	5.23	1.73e-07	0.03	FALSE
pVTA	RT1-CE16	intron excision ratio	chr20_3262317_3262450	0.11	2619	0.07	1.2e-06	-5.72	1.08e-08	0.1	FALSE
pVTA	RT1-CE16	intron excision ratio	chr20_3263417_3264387	0.65	18	0.6	4.0e-60	-5.8	6.82e-09	0.02	FALSE
pVTA	RT1-CE16	intron excision ratio	chr20_3321999_3322186	0.64	74	0.49	1.2e-44	-5.79	7.20e-09	0	FALSE
pVTA	RT1-CE1	intron excision ratio	chr20_3481171_3506884	0.16	42	0.18	2.8e-14	-5.66	1.50e-08	0	FALSE
pVTA	RT1-CE2	intron excision ratio	chr20_3481171_3506884	0.16	42	0.18	2.7e-14	-5.66	1.48e-08	0	FALSE
pVTA	RT1-CE3	intron excision ratio	chr20_3481171_3506884	0.16	43	0.18	2.3e-14	-5.67	1.44e-08	0	FALSE
pVTA	RT1-CE4	intron excision ratio	chr20_3481171_3506884	0.16	43	0.18	2.3e-14	-5.71	1.15e-08	0	FALSE
pVTA	RT1-CE5	intron excision ratio	chr20_3481171_3506884	0.16	43	0.18	2.3e-14	-5.72	1.07e-08	0	FALSE
pVTA	RT1-T24-4	intron excision ratio	chr20_2696015_2696143	0.16	31	0.12	6.8e-10	6.23	4.73e-10	0	FALSE
pVTA	Taf11	intron excision ratio	chr20_5958143_5958781	0.16	137	0.17	9.2e-14	-5.94	2.90e-09	0	FALSE
pVTA	Taf11	intron excision ratio	chr20_5958143_5959340	0.66	43	0.63	7.9e-65	-5.26	1.40e-07	0	FALSE
pVTA	Znrd1as1	intron excision ratio	chr20_1595233_1599608	0.05	1	0.03	1.9e-03	-6.37	1.95e-10	0.1	FALSE
pVTA	Znrd1as1	intron excision ratio	chr20_1595233_1599935	0.05	1	0.08	1.1e-06	6.25	4.00e-10	0.34	FALSE
pVTA	Anks1a	mRNA stability	Anks1a	0.07	1	0.03	1.0e-03	5.38	7.38e-08	0.03	FALSE
pVTA	Ehmt2	mRNA stability	Ehmt2	0.09	4033	0.08	2.9e-07	-6.21	5.29e-10	0.38	FALSE
pVTA	Fkbpl	mRNA stability	Fkbpl	0.06	1	0.03	1.0e-03	-5.73	1.00e-08	0.06	FALSE
pVTA	LOC108349039	mRNA stability	LOC108349039	0.04	1	0.03	1.7e-03	-5.56	2.77e-08	0.03	FALSE
pVTA	Rnf5	mRNA stability	Rnf5	0.15	6916	0.13	1.2e-10	-5.57	2.55e-08	0.03	FALSE
pVTA	Rps10	mRNA stability	Rps10	0.18	344	0.19	2.0e-15	5.86	4.70e-09	0	FALSE
pVTA	RT1-CE16	mRNA stability	RT1-CE16	0.37	2619	0.34	3.8e-28	-5.71	1.12e-08	0	FALSE
pVTA	RT1-CE4	mRNA stability	RT1-CE4	0.05	3147	0.02	1.1e-02	-6.51	7.63e-11	0.29	FALSE
pVTA	Vars1	mRNA stability	Vars1	0.09	1	0.09	1.2e-07	5.4	6.63e-08	0.42	FALSE
RMTg	RT1-CE12	alternative polyA	XM_063279094.1	0.49	25	0.41	5.5e-12	5.59	2.34e-08	0	FALSE
RMTg	RT1-CE12	alternative polyA	XM_063279095.1	0.47	15	0.38	4.5e-11	-5.68	1.34e-08	0.01	FALSE
RMTg	RT1-CE13	alternative polyA	XM_063279406.1	0.37	88	0.26	1.3e-07	-5.77	7.98e-09	0	FALSE
RMTg	LOC120098828	alternative TSS	XR_010060953.1	0.16	1	0.14	1.7e-04	5.5	3.79e-08	0.05	FALSE
RMTg	Abcf1	gene expression	Abcf1	0.17	1474	0.02	8.3e-02	-6.63	3.42e-11	0.1	FALSE
RMTg	Abhd16a	gene expression	Abhd16a	0.12	3604	0.02	8.1e-02	5.99	2.14e-09	0.22	FALSE
RMTg	Cchcr1	gene expression	Cchcr1	0.45	1	0.25	2.4e-07	6.64	3.20e-11	0.49	FALSE
RMTg	Ilrun	gene expression	Ilrun	0.67	1	0.37	8.4e-11	-6.89	5.64e-12	0.01	FALSE
RMTg	LOC102549726	gene expression	LOC102549726	0.35	1	0.18	1.4e-05	5.54	3.08e-08	0.12	FALSE
RMTg	LOC108353253	gene expression	LOC108353253	0.47	4	0.39	2.8e-11	-5.43	5.64e-08	0	FALSE
RMTg	LOC120098827	gene expression	LOC120098827	0.26	1	0.18	1.5e-05	5.46	4.76e-08	0.05	FALSE
RMTg	LOC120098828	gene expression	LOC120098828	0.73	19	0.54	5.6e-17	-5.32	1.02e-07	0	FALSE
RMTg	LOC120098829	gene expression	LOC120098829	0.36	18	0.33	1.4e-09	5.49	3.93e-08	0	FALSE
RMTg	LOC120098833	gene expression	LOC120098833	0.62	167	0.5	2.4e-15	-5.72	1.08e-08	0	FALSE
RMTg	Mapk14	gene expression	Mapk14	0.43	96	0.2	5.7e-06	-5.7	1.20e-08	0	FALSE
RMTg	Ppp1r18	gene expression	Ppp1r18	0.32	1	0.09	1.8e-03	-6.11	9.90e-10	0.05	FALSE
RMTg	RT1-CE11	gene expression	RT1-CE11	0.44	56	0.12	3.6e-04	-5.21	1.87e-07	0.02	FALSE
RMTg	RT1-CE12	gene expression	RT1-CE12	0.61	20	0.55	2.3e-17	5.37	7.92e-08	0	TRUE
RMTg	RT1-CE13	gene expression	RT1-CE13	0.22	1	0.1	1.5e-03	-5.78	7.46e-09	0.05	FALSE
RMTg	RT1-CE15	gene expression	RT1-CE15	0.63	11	0.49	7.3e-15	-5.62	1.92e-08	0	FALSE
RMTg	Znrd1as1	gene expression	Znrd1as1	0.33	1	0.21	3.2e-06	5.82	5.95e-09	0.05	FALSE
RMTg	LOC120098828	isoform ratio	XR_010060954.1	0.27	1	0.11	9.4e-04	-5.53	3.21e-08	0.05	FALSE
RMTg	Prrc2a	isoform ratio	NM_212462.2	0.15	43	0.07	5.6e-03	-6.07	1.26e-09	0.04	FALSE
RMTg	RT1-CE16	isoform ratio	NM_001008839.2	0.45	2619	0.32	2.3e-09	-6.26	3.95e-10	0.01	FALSE
RMTg	RT1-T24-4	isoform ratio	XM_063279395.1	0.2	13	0.09	2.4e-03	-5.31	1.12e-07	0.13	FALSE
RMTg	Ehmt2	intron excision ratio	chr20_3931761_3931867	0.14	4033	0.03	4.5e-02	5.49	3.95e-08	0.13	FALSE
RMTg	Ehmt2	intron excision ratio	chr20_3931791_3931867	0.14	4033	0.03	5.3e-02	-5.46	4.82e-08	0.13	FALSE
RMTg	Fance	intron excision ratio	chr20_6381075_6381254	0.18	1	0.08	3.9e-03	-5.48	4.25e-08	0.05	FALSE
RMTg	RT1-CE10	intron excision ratio	chr20_3302299_3302433	0.17	28	0.12	4.2e-04	-5.94	2.87e-09	0.04	FALSE
RMTg	RT1-CE10	intron excision ratio	chr20_3382009_3382202	0.37	131	0.11	6.5e-04	-7.14	9.00e-13	0.33	FALSE
RMTg	RT1-CE11	intron excision ratio	chr20_3263417_3264387	0.47	3055	0.34	8.7e-10	-5.78	7.46e-09	0	FALSE
RMTg	RT1-CE11	intron excision ratio	chr20_3281387_3360940	0.42	19	0.24	6.4e-07	5.52	3.49e-08	0.01	FALSE
RMTg	RT1-CE11	intron excision ratio	chr20_3302299_3302433	0.17	28	0.12	4.2e-04	-5.94	2.87e-09	0.04	FALSE
RMTg	RT1-CE11	intron excision ratio	chr20_3303065_3303197	0.27	25	0.2	5.4e-06	-5.91	3.49e-09	0.02	FALSE
RMTg	RT1-CE11	intron excision ratio	chr20_3382009_3382202	0.37	131	0.11	6.5e-04	-7.14	9.00e-13	0.33	FALSE
RMTg	RT1-CE12	intron excision ratio	chr20_3263417_3264387	0.48	2959	0.34	9.8e-10	-5.79	6.85e-09	0	FALSE
RMTg	RT1-CE13	intron excision ratio	chr20_3263417_3264387	0.5	2740	0.33	1.2e-09	-5.86	4.66e-09	0	FALSE
RMTg	RT1-CE13	intron excision ratio	chr20_3264662_3264833	0.22	43	0.14	1.6e-04	5.52	3.44e-08	0.01	FALSE
RMTg	RT1-CE14	intron excision ratio	chr20_3281387_3360940	0.46	28	0.23	7.0e-07	5.53	3.24e-08	0.01	FALSE
RMTg	RT1-CE14	intron excision ratio	chr20_3302299_3302433	0.19	26	0.12	4.2e-04	-5.93	3.07e-09	0.05	FALSE
RMTg	RT1-CE14	intron excision ratio	chr20_3303065_3303197	0.3	22	0.2	5.0e-06	-5.91	3.34e-09	0.02	FALSE
RMTg	RT1-CE14	intron excision ratio	chr20_3382009_3382202	0.37	124	0.11	6.4e-04	-7.18	6.76e-13	0.37	FALSE
RMTg	RT1-CE15	intron excision ratio	chr20_3263417_3264387	0.53	23	0.33	2.0e-09	5.86	4.53e-09	0	FALSE
RMTg	RT1-CE15	intron excision ratio	chr20_3281387_3360940	0.48	24	0.23	8.2e-07	5.52	3.47e-08	0.01	FALSE
RMTg	RT1-CE15	intron excision ratio	chr20_3302299_3302433	0.19	22	0.12	4.1e-04	-5.93	3.09e-09	0.05	FALSE
RMTg	RT1-CE15	intron excision ratio	chr20_3303065_3303197	0.31	34	0.2	5.5e-06	-5.71	1.15e-08	0.02	FALSE
RMTg	RT1-CE15	intron excision ratio	chr20_3382009_3382202	0.37	121	0.11	6.3e-04	-7.21	5.62e-13	0.37	FALSE
RMTg	RT1-CE16	intron excision ratio	chr20_3263417_3264387	0.53	2619	0.32	2.5e-09	-5.83	5.53e-09	0	FALSE
RMTg	RT1-CE16	intron excision ratio	chr20_3264662_3264833	0.22	43	0.14	1.5e-04	5.51	3.65e-08	0.01	FALSE
RMTg	RT1-CE16	intron excision ratio	chr20_3302299_3302433	0.19	22	0.12	4.1e-04	-5.93	3.06e-09	0.05	FALSE
RMTg	RT1-CE16	intron excision ratio	chr20_3382009_3382202	0.37	121	0.11	6.3e-04	-7.21	5.55e-13	0.37	FALSE
RMTg	RT1-CE5	intron excision ratio	chr20_3463812_3463989	0.31	3165	0.1	1.1e-03	-5.44	5.25e-08	0.02	FALSE
RMTg	RT1-CE5	intron excision ratio	chr20_3463812_3480859	0.36	3165	0.12	3.5e-04	5.3	1.14e-07	0.02	FALSE
RMTg	Znrd1as1	intron excision ratio	chr20_1577582_1591989	0.47	166	0.18	1.6e-05	5.43	5.60e-08	0.2	FALSE
RMTg	Abhd16a	mRNA stability	Abhd16a	0.11	3588	0.05	1.5e-02	-6	1.96e-09	0.21	FALSE
RMTg	Fance	mRNA stability	Fance	0.27	1939	0.12	3.7e-04	5.26	1.47e-07	0.02	FALSE
RMTg	LOC120098828	mRNA stability	LOC120098828	0.61	2611	0.33	1.5e-09	-5.34	9.20e-08	0	FALSE
RMTg	RT1-CE16	mRNA stability	RT1-CE16	0.52	16	0.28	5.1e-08	6.44	1.17e-10	0	FALSE