Best TWAS P=1.46e-08 · Best GWAS P=2.55e-09 conditioned to 1.26e-39
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| BLA | Axin2 | gene expression | Axin2 | 0.09 | 18 | 0.05 | 1.3e-03 | 5.18 | 2.18e-07 | 0.51 | FALSE |
| Brain | Axin2 | gene expression | Axin2 | 0.29 | 2034 | 0.26 | 6.0e-24 | -5.67 | 1.46e-08 | 0.94 | TRUE |
| Brain | LOC102550782 | gene expression | LOC102550782 | 0.09 | 2376 | 0.05 | 1.2e-05 | 5.34 | 9.40e-08 | 0.53 | FALSE |
| Brain | Fam20a | isoform ratio | XM_039086178.1 | 0.08 | 2 | 0.11 | 2.6e-10 | -5.39 | 7.09e-08 | 0 | TRUE |
| IL | Amz2 | gene expression | Amz2 | 0.23 | 2782 | 0.11 | 1.7e-03 | 5.31 | 1.07e-07 | 0.45 | FALSE |
| PL | Wipi1 | mRNA stability | Wipi1 | 0.07 | 1 | 0.03 | 4.9e-04 | -5.6 | 2.12e-08 | 0.53 | TRUE |
| pVTA | Arsg | intron excision ratio | chr10_94460446_94461943 | 0.28 | 2839 | 0.15 | 4.6e-07 | 5.25 | 1.53e-07 | 0.46 | FALSE |