Hub : Traits : Epididymis fat weight : ← : →

chr20:1,304,706-4,179,420

Trait: Epididymis fat weight

Best TWAS P=1.98e-09 · Best GWAS P=1.27e-07 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Mdc1	alternative TSS	XM_039098647.1	0.03	1269	0.01	2.4e-02	-5.36	8.49e-08	0.04	FALSE
Adipose	Ppp1r10	gene expression	Ppp1r10	0.02	1247	0.01	2.3e-02	-5.55	2.79e-08	0.07	FALSE
Adipose	RT1-T24-1	gene expression	RT1-T24-1	0.87	20	0.53	7.8e-69	-5.49	4.05e-08	0.05	FALSE
Adipose	LOC108353253	isoform ratio	XR_005497426.1	0.04	2434	0.01	2.2e-02	5.21	1.84e-07	0.36	FALSE
Adipose	LOC108353253	isoform ratio	XR_005497427.1	0.1	2434	0.07	1.3e-08	5.42	6.10e-08	0.18	FALSE
Adipose	RT1-T24-1	isoform ratio	NM_001410264.1	0.03	13	0	9.6e-02	5.62	1.87e-08	0.49	FALSE
Adipose	RT1-CE13	intron excision ratio	chr20_3317306_3317493	0.32	2566	0.05	6.9e-06	5.31	1.10e-07	0.56	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3259966_3278514	0.26	2436	0.02	4.8e-03	5.42	6.02e-08	0.26	FALSE
Adipose	RT1-CE15	intron excision ratio	chr20_3317306_3317493	0.32	2436	0.05	7.0e-06	5.47	4.49e-08	0.62	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3259966_3278514	0.27	2434	0.02	5.0e-03	5.45	4.93e-08	0.26	FALSE
Adipose	RT1-CE16	intron excision ratio	chr20_3317306_3317493	0.33	2434	0.05	7.1e-06	5.49	3.98e-08	0.62	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2597970_2672329	0.39	7	0.14	3.7e-15	5.83	5.51e-09	0.62	FALSE
Adipose	RT1-S3	intron excision ratio	chr20_2671794_2672329	0.36	5	0.17	5.4e-18	-5.62	1.91e-08	0.65	FALSE
Adipose	RT1-T24-1	intron excision ratio	chr20_2690616_2690922	0.23	1208	0.03	1.8e-04	-5.83	5.55e-09	0.65	FALSE
Adipose	RT1-T24-1	intron excision ratio	chr20_2723920_2724226	0.2	1208	0.02	2.7e-03	5.91	3.51e-09	0.28	FALSE
Adipose	RT1-T24-1	intron excision ratio	chr20_2741359_2741537	0.18	1208	0.01	1.2e-02	-5.72	1.04e-08	0.1	FALSE
Adipose	RT1-T24-1	intron excision ratio	chr20_2741359_2774720	0.32	1208	0.04	1.9e-05	-5.87	4.25e-09	0.5	FALSE
Adipose	RT1-T24-1	intron excision ratio	chr20_2773698_2774009	0.23	1208	0.03	1.2e-04	-5.82	6.04e-09	0.67	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2690616_2690922	0.23	1161	0.03	1.9e-04	-5.87	4.34e-09	0.66	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2694069_2724607	0.38	23	0.04	1.3e-05	-5.41	6.20e-08	0.06	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2694312_2694499	0.11	1161	-0	3.4e-01	5.68	1.32e-08	0.09	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2694312_2725194	0.22	10	0.03	6.9e-04	-5.69	1.30e-08	0.18	TRUE
Adipose	RT1-T24-3	intron excision ratio	chr20_2723920_2724226	0.19	1161	0.02	2.7e-03	5.95	2.66e-09	0.28	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2724501_2724607	0.39	17	0.07	3.1e-08	5.32	1.04e-07	0.06	FALSE
Adipose	RT1-T24-3	intron excision ratio	chr20_2773698_2774009	0.23	1161	0.03	1.2e-04	-5.86	4.73e-09	0.68	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2690616_2690922	0.23	1129	0.03	1.9e-04	-5.87	4.43e-09	0.67	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2691672_2692062	0.28	1129	0.06	2.7e-07	5.89	3.87e-09	0.69	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2694069_2724607	0.38	23	0.04	1.3e-05	-5.41	6.18e-08	0.06	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2723920_2724226	0.19	1129	0.02	2.7e-03	5.95	2.69e-09	0.28	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2724501_2724607	0.39	17	0.07	3.1e-08	5.32	1.03e-07	0.07	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2741359_2741537	0.19	1129	0.01	1.2e-02	-5.76	8.55e-09	0.1	FALSE
Adipose	RT1-T24-4	intron excision ratio	chr20_2773698_2774009	0.23	1129	0.03	1.2e-04	-5.85	4.83e-09	0.69	FALSE
Adipose	RT1-T24-1	mRNA stability	RT1-T24-1	0.86	12	0.31	2.0e-35	5.73	1.00e-08	0.05	FALSE
Adipose	Tubb5	mRNA stability	Tubb5	0.12	1269	0.09	2.0e-10	5.23	1.72e-07	0.67	FALSE
BLA	RT1-N3	alternative TSS	NM_001008855.2	0.29	3	0.09	2.4e-05	-5.21	1.85e-07	0.75	TRUE
BLA	LOC120098967	gene expression	LOC120098967	0.6	1258	0.36	6.8e-20	-5.66	1.54e-08	0.71	FALSE
BLA	Prr3	gene expression	Prr3	0.19	7	0.06	2.9e-04	5.55	2.91e-08	0.18	FALSE
BLA	RT1-N3	gene expression	RT1-N3	0.69	26	0.38	3.0e-21	-5.92	3.13e-09	0.76	FALSE
BLA	RT1-CE10	intron excision ratio	chr20_3276101_3276342	0.13	15	0.01	1.4e-01	-5.2	2.03e-07	0.35	FALSE
BLA	RT1-CE11	intron excision ratio	chr20_3258719_3259691	0.8	2814	0.29	8.5e-16	-5.21	1.94e-07	0.03	FALSE
BLA	RT1-CE11	intron excision ratio	chr20_3276101_3276342	0.13	8	0.01	1.4e-01	-5.2	2.03e-07	0.33	FALSE
BLA	RT1-CE12	intron excision ratio	chr20_3258719_3259691	0.8	2774	0.29	9.2e-16	-5.22	1.76e-07	0.02	FALSE
BLA	RT1-CE13	intron excision ratio	chr20_3258719_3259691	0.82	2580	0.29	1.3e-15	-5.29	1.19e-07	0.03	FALSE
BLA	RT1-CE14	intron excision ratio	chr20_3258719_3259691	0.82	35	0.29	7.9e-16	-5.34	9.15e-08	0.03	TRUE
BLA	RT1-CE14	intron excision ratio	chr20_3276101_3276342	0.12	11	0.02	3.1e-02	-5.18	2.21e-07	0.33	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3258719_3259691	0.83	26	0.29	8.0e-16	-5.34	9.27e-08	0.03	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3259966_3317493	0.58	2450	0.21	1.4e-11	5.29	1.24e-07	0.01	FALSE
BLA	RT1-CE15	intron excision ratio	chr20_3276101_3276342	0.12	1	0	2.6e-01	5.21	1.84e-07	0.04	TRUE
BLA	RT1-CE16	intron excision ratio	chr20_3258719_3259691	0.83	28	0.29	7.9e-16	-5.34	9.40e-08	0.02	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3259966_3317493	0.58	2448	0.21	1.4e-11	5.3	1.19e-07	0.01	FALSE
BLA	RT1-CE16	intron excision ratio	chr20_3276101_3276342	0.13	9	0.02	4.4e-02	-5.21	1.84e-07	0.33	FALSE
Brain	Flot1	gene expression	Flot1	0.32	1315	0.2	1.2e-18	5.94	2.88e-09	0.01	FALSE
Brain	Gnl1	gene expression	Gnl1	0.25	1262	0.19	5.6e-17	5.47	4.49e-08	0.71	FALSE
Brain	LOC108349027	gene expression	LOC108349027	0.2	1222	0.14	4.3e-13	5.54	3.07e-08	0.71	FALSE
Brain	RT1-N3	gene expression	RT1-N3	0.45	1052	0.32	2.1e-30	-5.54	2.98e-08	0.78	FALSE
Brain	RT1-N3	isoform ratio	NM_001008855.2	0.21	8	0.15	2.1e-13	5.81	6.11e-09	0.73	TRUE
Brain	RT1-N3	isoform ratio	XM_006255908.4	0.33	3	0.26	6.3e-24	-5.21	1.94e-07	0.78	FALSE
Brain	RT1-T24-4	isoform ratio	XM_039099254.1	0.21	14	0.2	3.5e-18	5.33	9.77e-08	0.01	FALSE
Brain	Atat1	intron excision ratio	chr20_2851533_2854003	0.05	1296	0.02	1.1e-02	-5.86	4.58e-09	0.24	FALSE
Brain	Ddr1	intron excision ratio	chr20_3058925_3060490	0.07	1315	0.02	8.7e-03	5.56	2.67e-08	0.07	FALSE
Brain	RT1-CE11	intron excision ratio	chr20_3258719_3259691	0.77	9	0.34	9.1e-33	-5.3	1.17e-07	0.07	FALSE
Brain	RT1-CE12	intron excision ratio	chr20_3258719_3259691	0.76	9	0.34	8.4e-33	-5.29	1.19e-07	0.07	FALSE
Brain	RT1-CE13	intron excision ratio	chr20_3258719_3259691	0.71	9	0.34	6.7e-33	-5.29	1.24e-07	0.08	FALSE
Brain	RT1-CE15	intron excision ratio	chr20_3258719_3259691	0.69	9	0.34	6.1e-33	-5.28	1.29e-07	0.08	FALSE
Brain	RT1-CE16	intron excision ratio	chr20_3258719_3259691	0.67	9	0.34	5.9e-33	-5.28	1.32e-07	0.08	FALSE
Brain	RT1-S3	intron excision ratio	chr20_2597970_2672329	0.06	1120	0.03	1.4e-03	5.67	1.42e-08	0.69	FALSE
Brain	RT1-S3	intron excision ratio	chr20_2671794_2672329	0.04	8	0.01	3.1e-02	5.96	2.48e-09	0.46	FALSE
Brain	RT1-T24-3	intron excision ratio	chr20_2694069_2745591	0.19	1206	0.06	1.5e-06	5.22	1.80e-07	0.01	FALSE
Brain	RT1-T24-3	intron excision ratio	chr20_2694312_2725194	0.06	1206	0.02	9.8e-03	5.77	7.91e-09	0.11	FALSE
Brain	RT1-T24-3	intron excision ratio	chr20_2724501_2724607	0.4	2	0.17	6.6e-16	-5.58	2.36e-08	0.01	TRUE
Brain	RT1-T24-4	intron excision ratio	chr20_2691672_2692062	0.31	7	0.13	6.6e-12	5.71	1.12e-08	0.01	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2694069_2745591	0.19	1174	0.06	1.5e-06	5.22	1.75e-07	0.01	FALSE
Brain	RT1-T24-4	intron excision ratio	chr20_2724501_2724607	0.4	2	0.17	6.4e-16	-5.58	2.37e-08	0.01	FALSE
Brain	RT1-S3	mRNA stability	RT1-S3	0.24	1120	0.23	5.1e-21	-5.47	4.39e-08	0.01	FALSE
Eye	Tcf19	mRNA stability	Tcf19	0.39	2253	0.06	4.4e-02	5.18	2.18e-07	0.09	FALSE
IL	RT1-T24-3	alternative polyA	XM_039098963.1	0.32	1206	0.16	1.3e-04	-5.45	5.07e-08	0.03	FALSE
IL	LOC120098967	gene expression	LOC120098967	0.49	1258	0.18	4.2e-05	-5.51	3.61e-08	0.63	FALSE
IL	RT1-T24-3	intron excision ratio	chr20_2694069_2745591	0.25	1206	0.04	3.2e-02	5.53	3.14e-08	0.09	FALSE
IL	RT1-T24-4	intron excision ratio	chr20_2694069_2745591	0.25	1174	0.04	3.3e-02	5.54	3.02e-08	0.09	FALSE
LHb	RT1-T24-3	alternative polyA	NM_001166403.1	0.39	20	0.21	1.2e-05	5.26	1.41e-07	0.02	FALSE
LHb	RT1-T24-3	alternative polyA	XM_039098963.1	0.39	6	0.2	1.3e-05	-5.25	1.51e-07	0.02	TRUE
LHb	Flot1	gene expression	Flot1	0.17	1315	0.1	2.8e-03	5.5	3.71e-08	0.07	FALSE
LHb	LOC120098967	gene expression	LOC120098967	0.46	22	0.15	2.0e-04	5.76	8.43e-09	0.58	FALSE
Liver	RT1-T24-3	alternative polyA	NM_001166403.1	0.27	12	0.1	1.5e-11	-5.49	4.13e-08	0.01	FALSE
Liver	RT1-T24-3	alternative polyA	XM_039098963.1	0.32	41	0.14	2.2e-15	5.51	3.54e-08	0.01	FALSE
Liver	RT1-N3	alternative TSS	XM_039098421.1	0.2	1006	0.16	6.7e-17	5.43	5.77e-08	0.02	FALSE
Liver	Gnl1	gene expression	Gnl1	0.12	1217	0.08	5.2e-09	-5.87	4.37e-09	0.01	FALSE
Liver	LOC108349027	gene expression	LOC108349027	0.07	1177	0.03	3.4e-04	5.69	1.30e-08	0.7	FALSE
Liver	LOC120098967	gene expression	LOC120098967	0.28	1213	0.17	7.8e-19	-5.58	2.36e-08	0.68	FALSE
Liver	RT1-S3	gene expression	RT1-S3	0.12	1075	0.07	3.2e-08	-5.93	3.10e-09	0.13	FALSE
Liver	RT1-T24-4	gene expression	RT1-T24-4	0.13	1129	0.08	7.4e-09	5.68	1.38e-08	0.72	FALSE
Liver	RT1-CE11	intron excision ratio	chr20_3276691_3298501	0.39	31	0.14	1.2e-15	-5.48	4.27e-08	0.62	FALSE
Liver	RT1-CE13	intron excision ratio	chr20_3317306_3317493	0.47	2566	0.11	3.3e-12	5.37	7.89e-08	0.61	FALSE
Liver	RT1-CE14	intron excision ratio	chr20_3276691_3298501	0.43	22	0.15	2.8e-16	-5.44	5.29e-08	0.66	FALSE
Liver	RT1-CE14	intron excision ratio	chr20_3317306_3317493	0.47	2476	0.11	3.0e-12	5.46	4.83e-08	0.65	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3276691_3298501	0.44	19	0.15	2.9e-16	-5.41	6.18e-08	0.67	FALSE
Liver	RT1-CE15	intron excision ratio	chr20_3317306_3317493	0.48	2436	0.11	2.8e-12	5.53	3.21e-08	0.67	FALSE
Liver	RT1-CE16	intron excision ratio	chr20_3317306_3317493	0.48	2434	0.11	2.7e-12	5.54	2.96e-08	0.67	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2597970_2672329	0.48	6	0.17	7.7e-19	5.79	6.97e-09	0.71	FALSE
Liver	RT1-S3	intron excision ratio	chr20_2671794_2672329	0.43	10	0.17	3.9e-18	-5.79	6.90e-09	0.71	FALSE
Liver	RT1-T24-3	intron excision ratio	chr20_2694312_2725194	0.37	1161	0.07	1.5e-08	5.94	2.82e-09	0.03	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2691465_2691643	0.23	1129	0.02	1.2e-03	5.92	3.26e-09	0.14	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2691928_2692062	0.18	4	0.03	1.6e-04	-5.39	6.91e-08	0.35	FALSE
Liver	RT1-T24-4	intron excision ratio	chr20_2741359_2741537	0.1	1129	0.02	2.0e-03	-5.73	9.84e-09	0.66	FALSE
NAcc	RT1-S3	alternative TSS	NM_001008886.2	0.03	1120	0.02	2.5e-03	-5.87	4.39e-09	0.14	FALSE
NAcc	RT1-S3	alternative TSS	XM_006255917.4	0.03	1120	0.03	5.6e-04	5.82	6.05e-09	0.07	FALSE
NAcc	LOC108349027	gene expression	LOC108349027	0.21	4	0.2	9.4e-23	5.94	2.89e-09	0.72	FALSE
NAcc	LOC120098827	gene expression	LOC120098827	0.25	22	0.23	8.2e-27	-5.27	1.39e-07	0.74	FALSE
NAcc	LOC120098967	gene expression	LOC120098967	0.4	100	0.39	3.9e-48	5.83	5.46e-09	0.72	FALSE
NAcc	RT1-N3	gene expression	RT1-N3	0.7	37	0.33	2.3e-39	-5.9	3.59e-09	0.77	FALSE
OFC	Prr3	gene expression	Prr3	0.26	1262	0.11	1.7e-03	-5.83	5.59e-09	0.28	FALSE
OFC	RT1-CE16	gene expression	RT1-CE16	0.92	2448	0.51	3.6e-14	-5.21	1.89e-07	0.01	FALSE
OFC	RT1-N3	gene expression	RT1-N3	0.64	462	0.4	1.1e-10	6	2.00e-09	0.74	FALSE
OFC	RT1-T24-3	gene expression	RT1-T24-3	0.72	13	0.38	6.3e-10	5.89	3.93e-09	0.01	FALSE
OFC	RT1-CE14	isoform ratio	NR_172019.1	0.15	2490	0.06	1.7e-02	5.46	4.83e-08	0.18	FALSE
OFC	RT1-CE11	intron excision ratio	chr20_3258719_3259691	0.63	2814	0.19	3.3e-05	-5.32	1.03e-07	0.06	FALSE
OFC	RT1-CE12	intron excision ratio	chr20_3258719_3259691	0.63	2774	0.2	2.2e-05	-5.33	9.98e-08	0.06	FALSE
OFC	RT1-CE13	intron excision ratio	chr20_3258719_3259691	0.61	2580	0.21	1.2e-05	-5.33	9.66e-08	0.07	FALSE
OFC	RT1-CE15	intron excision ratio	chr20_3258719_3259691	0.61	2450	0.21	9.9e-06	-5.42	5.99e-08	0.07	FALSE
OFC	RT1-CE16	intron excision ratio	chr20_3258719_3259691	0.61	2448	0.21	9.4e-06	-5.43	5.78e-08	0.07	FALSE
OFC	RT1-T24-1	intron excision ratio	chr20_2723920_2724226	0.28	11	0.08	6.3e-03	-5.96	2.59e-09	0.28	FALSE
OFC	RT1-T24-3	intron excision ratio	chr20_2723920_2724226	0.25	1206	0.04	4.2e-02	5.96	2.56e-09	0.28	FALSE
OFC	RT1-T24-4	intron excision ratio	chr20_2723920_2724226	0.25	1174	0.04	4.2e-02	5.96	2.57e-09	0.28	FALSE
PL	Ddr1	alternative TSS	XM_017601560.2	0.04	1315	0.03	1.5e-04	-5.26	1.45e-07	0.02	FALSE
PL	LOC120098829	alternative TSS	XR_005497433.1	0.07	2580	0.05	7.1e-06	5.38	7.32e-08	0.72	FALSE
PL	LOC120098829	alternative TSS	XR_005497434.1	0.05	2580	0.02	1.9e-03	-5.49	3.91e-08	0.69	FALSE
PL	LOC120098829	alternative TSS	XR_005497433.1	0.06	2580	0.03	8.2e-04	5.38	7.55e-08	0.65	FALSE
PL	LOC120098829	alternative TSS	XR_005497434.1	0.06	2580	0.03	3.5e-04	-5.51	3.59e-08	0.67	FALSE
PL	LOC120098967	gene expression	LOC120098967	0.74	79	0.43	3.5e-52	6	1.98e-09	0.72	TRUE
PL	RT1-N3	gene expression	RT1-N3	0.5	66	0.45	7.7e-55	-5.96	2.59e-09	0.77	FALSE
PL	Mdc1	mRNA stability	Mdc1	0.11	1315	0.09	5.5e-10	-5.82	5.71e-09	0.01	FALSE
pVTA	RT1-CE5	alternative polyA	XM_039098663.1	0.29	39	0.13	3.2e-06	-5.56	2.63e-08	0.57	FALSE
pVTA	LOC120098850	alternative TSS	XR_005497495.1	0.13	74	0.1	6.3e-05	5.19	2.15e-07	0.53	FALSE
pVTA	LOC120098850	alternative TSS	XR_005497496.1	0.1	1376	0.06	1.5e-03	5.41	6.47e-08	0.42	FALSE
pVTA	LOC120098967	gene expression	LOC120098967	0.45	33	0.33	8.1e-15	5.82	5.80e-09	0.69	FALSE
pVTA	Prr3	gene expression	Prr3	0.22	42	0.06	2.1e-03	5.34	9.24e-08	0.35	FALSE
pVTA	RT1-N3	gene expression	RT1-N3	0.38	1	0.24	1.3e-10	5.19	2.07e-07	0.8	FALSE
pVTA	RT1-N3	isoform ratio	XM_006255908.4	0.37	216	0.13	2.4e-06	5.2	1.96e-07	0.75	FALSE
pVTA	RT1-CE14	intron excision ratio	chr20_3297603_3297737	0.25	39	0.23	3.8e-10	-5.5	3.86e-08	0.04	FALSE
pVTA	RT1-CE15	intron excision ratio	chr20_3297603_3297737	0.24	35	0.23	3.8e-10	-5.5	3.80e-08	0.04	FALSE
pVTA	RT1-CE16	intron excision ratio	chr20_3257619_3257752	0.17	2448	0.09	7.1e-05	-5.25	1.50e-07	0.04	FALSE
pVTA	RT1-S3	mRNA stability	RT1-S3	0.21	7	0.1	6.8e-05	-5.67	1.40e-08	0.23	FALSE
RMTg	LOC120098967	gene expression	LOC120098967	0.18	1	0.09	1.9e-03	5.19	2.07e-07	0.06	FALSE
RMTg	Ppp1r18	gene expression	Ppp1r18	0.26	1315	0.07	6.0e-03	5.68	1.37e-08	0.46	FALSE
RMTg	RT1-CE14	isoform ratio	NR_172019.1	0.14	2490	0.06	9.4e-03	-5.23	1.73e-07	0.07	FALSE
RMTg	RT1-CE14	isoform ratio	XR_008934201.1	0.15	2490	0.07	5.8e-03	5.24	1.63e-07	0.07	FALSE
RMTg	RT1-CE15	intron excision ratio	chr20_3297603_3297737	0.26	2450	0.16	5.4e-05	5.2	2.00e-07	0.08	FALSE
RMTg	RT1-CE16	intron excision ratio	chr20_3297603_3297737	0.27	2448	0.16	5.3e-05	5.2	1.96e-07	0.08	FALSE