chr3:129,554,891-132,075,398

Trait: Epididymis fat weight

Best TWAS P=1.36e-08 · Best GWAS P=9.32e-09 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Snrpb2 mRNA stability ENSRNOG00000004967 0.04 20 0.01 1.5e-02 -5.14 2.72e-07 0.47 FALSE
BLA Kif16b gene expression ENSRNOG00000004951 0.04 1 0.04 4.1e-03 5.15 2.57e-07 0.04 FALSE
BLA Snrpb2 gene expression ENSRNOG00000004967 0.05 1 0.02 4.4e-02 5.54 2.95e-08 0.04 FALSE
BLA Pcsk2 gene expression ENSRNOG00000005438 0.11 1 0.07 1.9e-04 5.18 2.27e-07 0.05 FALSE
BLA Otor gene expression ENSRNOG00000028721 0.07 1960 0.04 2.7e-03 -5.64 1.72e-08 0.24 FALSE
BLA Pcsk2 mRNA stability ENSRNOG00000005438 0.23 1 0.15 3.1e-08 -5.41 6.21e-08 0.42 FALSE
BLA Dstn mRNA stability ENSRNOG00000005924 0.45 182 0.39 2.2e-22 5.26 1.41e-07 0.62 FALSE
Brain Pcsk2 gene expression ENSRNOG00000005438 0.38 1 0.44 3.9e-44 5.48 4.34e-08 0.53 FALSE
Brain Otor gene expression ENSRNOG00000028721 0.1 25 0.11 5.1e-10 -5.57 2.50e-08 0.49 FALSE
Brain Snrpb2 intron excision ratio chr3:130399307:130400989 0.03 1 0.03 5.7e-04 5.66 1.53e-08 0.06 FALSE
IL Pcsk2 gene expression ENSRNOG00000005438 0.49 1 0.21 7.5e-06 5.68 1.36e-08 0.18 TRUE
LHb Snrpb2 gene expression ENSRNOG00000004967 0.24 1 0.15 2.3e-04 5.34 9.47e-08 0.05 FALSE
LHb Rrbp1 gene expression ENSRNOG00000005958 0.22 1 0.21 1.0e-05 -5.53 3.25e-08 0.13 FALSE
LHb Otor gene expression ENSRNOG00000028721 0.26 5 0.01 1.7e-01 -5.57 2.53e-08 0.28 FALSE
LHb Kif16b mRNA stability ENSRNOG00000004951 0.11 6 0.03 7.3e-02 -5.17 2.30e-07 0.34 FALSE
Liver Kif16b alternative polyA ENSRNOT00000036273 0.18 1 0.14 6.7e-15 -5.58 2.44e-08 0.6 FALSE
Liver Kif16b alternative polyA ENSRNOT00000118037 0.18 1 0.14 1.3e-15 5.51 3.54e-08 0.52 FALSE
Liver Kif16b gene expression ENSRNOG00000004951 0.21 12 0.18 3.7e-19 -5.24 1.61e-07 0.39 FALSE
Liver Kif16b isoform ratio ENSRNOT00000083061 0.06 1 0.04 4.7e-05 -5.32 1.05e-07 0.13 FALSE
Liver Kif16b isoform ratio ENSRNOT00000118037 0.15 2140 0.13 4.0e-14 5.35 8.94e-08 0.55 FALSE
Liver Kif16b intron excision ratio chr3:129976371:129996958 0.03 2140 0.01 2.4e-02 -5.44 5.24e-08 0.1 FALSE
Liver Snrpb2 intron excision ratio chr3:130399832:130400989 0.06 1963 0.03 2.4e-04 -5.31 1.08e-07 0.35 FALSE
Liver Kif16b mRNA stability ENSRNOG00000004951 0.13 30 0.06 1.2e-07 -5.27 1.39e-07 0.08 FALSE
NAcc Snrpb2 gene expression ENSRNOG00000004967 0.04 1 0.02 1.4e-02 5.61 1.97e-08 0.04 FALSE
NAcc Otor gene expression ENSRNOG00000028721 0.04 1 0.01 5.2e-02 -5.42 5.86e-08 0.04 FALSE
NAcc Kif16b mRNA stability ENSRNOG00000004951 0.04 27 0.01 5.8e-02 -5.17 2.33e-07 0.46 FALSE
PL Snrpb2 gene expression ENSRNOG00000004967 0.12 9 0.11 1.3e-08 5.22 1.82e-07 0.37 FALSE
PL Pcsk2 gene expression ENSRNOG00000005438 0.15 80 0.18 1.0e-13 5.54 3.05e-08 0.35 FALSE
PL Snrpb2 intron excision ratio chr3:130399307:130400989 0.05 1963 0.03 2.9e-03 5.63 1.78e-08 0.49 FALSE
PL Pcsk2 mRNA stability ENSRNOG00000005438 0.04 1 0.02 5.4e-03 -5.38 7.50e-08 0.04 FALSE