Best TWAS P=1.36e-08 · Best GWAS P=9.32e-09 conditioned to 1.00e+00
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Snrpb2 | mRNA stability | ENSRNOG00000004967 | 0.04 | 20 | 0.01 | 1.5e-02 | -5.14 | 2.72e-07 | 0.47 | FALSE |
BLA | Kif16b | gene expression | ENSRNOG00000004951 | 0.04 | 1 | 0.04 | 4.1e-03 | 5.15 | 2.57e-07 | 0.04 | FALSE |
BLA | Snrpb2 | gene expression | ENSRNOG00000004967 | 0.05 | 1 | 0.02 | 4.4e-02 | 5.54 | 2.95e-08 | 0.04 | FALSE |
BLA | Pcsk2 | gene expression | ENSRNOG00000005438 | 0.11 | 1 | 0.07 | 1.9e-04 | 5.18 | 2.27e-07 | 0.05 | FALSE |
BLA | Otor | gene expression | ENSRNOG00000028721 | 0.07 | 1960 | 0.04 | 2.7e-03 | -5.64 | 1.72e-08 | 0.24 | FALSE |
BLA | Pcsk2 | mRNA stability | ENSRNOG00000005438 | 0.23 | 1 | 0.15 | 3.1e-08 | -5.41 | 6.21e-08 | 0.42 | FALSE |
BLA | Dstn | mRNA stability | ENSRNOG00000005924 | 0.45 | 182 | 0.39 | 2.2e-22 | 5.26 | 1.41e-07 | 0.62 | FALSE |
Brain | Pcsk2 | gene expression | ENSRNOG00000005438 | 0.38 | 1 | 0.44 | 3.9e-44 | 5.48 | 4.34e-08 | 0.53 | FALSE |
Brain | Otor | gene expression | ENSRNOG00000028721 | 0.1 | 25 | 0.11 | 5.1e-10 | -5.57 | 2.50e-08 | 0.49 | FALSE |
Brain | Snrpb2 | intron excision ratio | chr3:130399307:130400989 | 0.03 | 1 | 0.03 | 5.7e-04 | 5.66 | 1.53e-08 | 0.06 | FALSE |
IL | Pcsk2 | gene expression | ENSRNOG00000005438 | 0.49 | 1 | 0.21 | 7.5e-06 | 5.68 | 1.36e-08 | 0.18 | TRUE |
LHb | Snrpb2 | gene expression | ENSRNOG00000004967 | 0.24 | 1 | 0.15 | 2.3e-04 | 5.34 | 9.47e-08 | 0.05 | FALSE |
LHb | Rrbp1 | gene expression | ENSRNOG00000005958 | 0.22 | 1 | 0.21 | 1.0e-05 | -5.53 | 3.25e-08 | 0.13 | FALSE |
LHb | Otor | gene expression | ENSRNOG00000028721 | 0.26 | 5 | 0.01 | 1.7e-01 | -5.57 | 2.53e-08 | 0.28 | FALSE |
LHb | Kif16b | mRNA stability | ENSRNOG00000004951 | 0.11 | 6 | 0.03 | 7.3e-02 | -5.17 | 2.30e-07 | 0.34 | FALSE |
Liver | Kif16b | alternative polyA | ENSRNOT00000036273 | 0.18 | 1 | 0.14 | 6.7e-15 | -5.58 | 2.44e-08 | 0.6 | FALSE |
Liver | Kif16b | alternative polyA | ENSRNOT00000118037 | 0.18 | 1 | 0.14 | 1.3e-15 | 5.51 | 3.54e-08 | 0.52 | FALSE |
Liver | Kif16b | gene expression | ENSRNOG00000004951 | 0.21 | 12 | 0.18 | 3.7e-19 | -5.24 | 1.61e-07 | 0.39 | FALSE |
Liver | Kif16b | isoform ratio | ENSRNOT00000083061 | 0.06 | 1 | 0.04 | 4.7e-05 | -5.32 | 1.05e-07 | 0.13 | FALSE |
Liver | Kif16b | isoform ratio | ENSRNOT00000118037 | 0.15 | 2140 | 0.13 | 4.0e-14 | 5.35 | 8.94e-08 | 0.55 | FALSE |
Liver | Kif16b | intron excision ratio | chr3:129976371:129996958 | 0.03 | 2140 | 0.01 | 2.4e-02 | -5.44 | 5.24e-08 | 0.1 | FALSE |
Liver | Snrpb2 | intron excision ratio | chr3:130399832:130400989 | 0.06 | 1963 | 0.03 | 2.4e-04 | -5.31 | 1.08e-07 | 0.35 | FALSE |
Liver | Kif16b | mRNA stability | ENSRNOG00000004951 | 0.13 | 30 | 0.06 | 1.2e-07 | -5.27 | 1.39e-07 | 0.08 | FALSE |
NAcc | Snrpb2 | gene expression | ENSRNOG00000004967 | 0.04 | 1 | 0.02 | 1.4e-02 | 5.61 | 1.97e-08 | 0.04 | FALSE |
NAcc | Otor | gene expression | ENSRNOG00000028721 | 0.04 | 1 | 0.01 | 5.2e-02 | -5.42 | 5.86e-08 | 0.04 | FALSE |
NAcc | Kif16b | mRNA stability | ENSRNOG00000004951 | 0.04 | 27 | 0.01 | 5.8e-02 | -5.17 | 2.33e-07 | 0.46 | FALSE |
PL | Snrpb2 | gene expression | ENSRNOG00000004967 | 0.12 | 9 | 0.11 | 1.3e-08 | 5.22 | 1.82e-07 | 0.37 | FALSE |
PL | Pcsk2 | gene expression | ENSRNOG00000005438 | 0.15 | 80 | 0.18 | 1.0e-13 | 5.54 | 3.05e-08 | 0.35 | FALSE |
PL | Snrpb2 | intron excision ratio | chr3:130399307:130400989 | 0.05 | 1963 | 0.03 | 2.9e-03 | 5.63 | 1.78e-08 | 0.49 | FALSE |
PL | Pcsk2 | mRNA stability | ENSRNOG00000005438 | 0.04 | 1 | 0.02 | 5.4e-03 | -5.38 | 7.50e-08 | 0.04 | FALSE |